View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19429_low_8 (Length: 297)

Name: NF19429_low_8
Description: NF19429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19429_low_8
NF19429_low_8
[»] chr5 (33 HSPs)
chr5 (1-276)||(22797242-22797517)
chr5 (1-96)||(20860339-20860434)
chr5 (1-95)||(24162014-24162108)
chr5 (1-96)||(23387549-23387644)
chr5 (1-89)||(34132086-34132174)
chr5 (7-96)||(25400740-25400829)
chr5 (40-96)||(19761583-19761639)
chr5 (1-93)||(28666492-28666584)
chr5 (1-96)||(29987956-29988052)
chr5 (1-96)||(17469560-17469655)
chr5 (1-96)||(18832222-18832317)
chr5 (1-96)||(19003767-19003862)
chr5 (1-96)||(23214827-23214922)
chr5 (1-98)||(25920831-25920928)
chr5 (1-96)||(23338892-23338986)
chr5 (2-96)||(19053102-19053196)
chr5 (38-96)||(23266853-23266911)
chr5 (36-96)||(25572480-25572540)
chr5 (29-92)||(34488885-34488948)
chr5 (15-96)||(24320523-24320605)
chr5 (38-94)||(15691305-15691361)
chr5 (38-98)||(24263750-24263810)
chr5 (1-96)||(26122382-26122477)
chr5 (15-96)||(24658301-24658383)
chr5 (38-96)||(26348479-26348537)
chr5 (38-96)||(31600077-31600135)
chr5 (55-96)||(18939574-18939615)
chr5 (12-89)||(23110205-23110282)
chr5 (56-93)||(24513201-24513238)
chr5 (66-99)||(24849569-24849602)
chr5 (48-96)||(17831741-17831788)
chr5 (56-96)||(20548455-20548495)
chr5 (56-96)||(21352970-21353010)
[»] chr1 (40 HSPs)
chr1 (1-96)||(21663092-21663187)
chr1 (1-96)||(729136-729231)
chr1 (1-96)||(15542310-15542405)
chr1 (167-277)||(23391107-23391217)
chr1 (1-96)||(18527498-18527593)
chr1 (15-96)||(14782544-14782625)
chr1 (1-96)||(21450767-21450862)
chr1 (14-96)||(12210278-12210360)
chr1 (17-86)||(27973319-27973388)
chr1 (12-96)||(26647359-26647443)
chr1 (2-94)||(28009747-28009839)
chr1 (1-86)||(21848626-21848711)
chr1 (1-96)||(22507383-22507479)
chr1 (1-96)||(18734587-18734682)
chr1 (1-96)||(18832215-18832310)
chr1 (2-96)||(9782981-9783075)
chr1 (14-96)||(15158790-15158872)
chr1 (39-96)||(24464652-24464709)
chr1 (1-88)||(15571698-15571785)
chr1 (1-88)||(16363623-16363710)
chr1 (1-96)||(21333073-21333168)
chr1 (1-96)||(22426517-22426612)
chr1 (14-89)||(24901222-24901297)
chr1 (1-96)||(26611333-26611428)
chr1 (38-96)||(33192389-33192447)
chr1 (7-96)||(25402437-25402526)
chr1 (3-96)||(35133886-35133979)
chr1 (32-89)||(17543122-17543181)
chr1 (40-96)||(22621832-22621888)
chr1 (1-96)||(44797117-44797213)
chr1 (37-96)||(11845223-11845282)
chr1 (1-96)||(18827396-18827491)
chr1 (47-89)||(7221562-7221604)
chr1 (39-89)||(14235293-14235343)
chr1 (50-96)||(27912113-27912159)
chr1 (50-91)||(21536913-21536954)
chr1 (1-69)||(12011213-12011281)
chr1 (48-96)||(16114847-16114895)
chr1 (56-96)||(26022440-26022480)
chr1 (40-96)||(26652613-26652669)
[»] chr3 (38 HSPs)
chr3 (1-96)||(12517290-12517385)
chr3 (1-96)||(34276439-34276534)
chr3 (7-96)||(19912586-19912675)
chr3 (1-96)||(8115296-8115391)
chr3 (1-101)||(18457108-18457208)
chr3 (1-88)||(8765674-8765761)
chr3 (1-88)||(8770564-8770651)
chr3 (1-96)||(1096763-1096857)
chr3 (1-96)||(22470404-22470499)
chr3 (1-95)||(8145248-8145342)
chr3 (38-96)||(20886905-20886963)
chr3 (1-95)||(22246997-22247090)
chr3 (1-94)||(25850952-25851045)
chr3 (8-91)||(12771209-12771292)
chr3 (1-96)||(16242196-16242290)
chr3 (29-96)||(52935535-52935602)
chr3 (38-96)||(819848-819906)
chr3 (38-96)||(7805779-7805837)
chr3 (14-92)||(12372338-12372416)
chr3 (1-92)||(3114715-3114806)
chr3 (29-93)||(5521551-5521621)
chr3 (5-96)||(13938848-13938939)
chr3 (1-96)||(18535770-18535865)
chr3 (38-92)||(20891651-20891705)
chr3 (7-96)||(2166037-2166125)
chr3 (38-91)||(22450486-22450539)
chr3 (25-89)||(2508728-2508792)
chr3 (1-100)||(14977806-14977905)
chr3 (50-96)||(23168488-23168534)
chr3 (38-96)||(27852605-27852663)
chr3 (38-96)||(31283905-31283963)
chr3 (29-86)||(19387871-19387928)
chr3 (1-46)||(20431472-20431517)
chr3 (48-96)||(15669340-15669388)
chr3 (56-96)||(16228346-16228386)
chr3 (16-68)||(17135107-17135159)
chr3 (56-96)||(27074007-27074047)
chr3 (56-96)||(27412660-27412700)
[»] chr8 (36 HSPs)
chr8 (1-96)||(13313273-13313368)
chr8 (1-96)||(29380962-29381058)
chr8 (1-96)||(20400334-20400429)
chr8 (1-98)||(24583171-24583268)
chr8 (1-96)||(17510904-17510999)
chr8 (1-96)||(19704986-19705081)
chr8 (1-91)||(15176439-15176529)
chr8 (1-96)||(29765393-29765489)
chr8 (1-96)||(14271841-14271936)
chr8 (1-96)||(23867831-23867926)
chr8 (2-81)||(24520019-24520098)
chr8 (1-96)||(28621604-28621699)
chr8 (17-96)||(17100208-17100287)
chr8 (1-96)||(18446861-18446956)
chr8 (1-96)||(19265822-19265917)
chr8 (1-84)||(24090892-24090975)
chr8 (14-96)||(4007153-4007235)
chr8 (2-96)||(24389757-24389851)
chr8 (29-95)||(30117661-30117727)
chr8 (39-96)||(21695415-21695472)
chr8 (1-89)||(24380362-24380450)
chr8 (48-98)||(17976278-17976328)
chr8 (38-96)||(19791430-19791488)
chr8 (38-96)||(24908941-24908999)
chr8 (38-96)||(24911162-24911220)
chr8 (48-96)||(13833605-13833653)
chr8 (38-98)||(24381986-24382046)
chr8 (12-84)||(34499239-34499311)
chr8 (56-99)||(26829465-26829508)
chr8 (58-96)||(21316840-21316878)
chr8 (39-96)||(5151957-5152014)
chr8 (43-96)||(25227301-25227354)
chr8 (39-95)||(15557405-15557461)
chr8 (48-96)||(17650008-17650056)
chr8 (38-86)||(18007573-18007620)
chr8 (38-94)||(24105520-24105576)
[»] chr4 (31 HSPs)
chr4 (1-96)||(17335357-17335452)
chr4 (4-96)||(15166471-15166563)
chr4 (1-96)||(18750824-18750919)
chr4 (1-96)||(19556543-19556636)
chr4 (1-96)||(22171748-22171843)
chr4 (1-85)||(7583792-7583876)
chr4 (1-96)||(17218529-17218623)
chr4 (29-96)||(25025134-25025201)
chr4 (38-96)||(17434471-17434529)
chr4 (2-96)||(17711307-17711401)
chr4 (27-96)||(8968073-8968142)
chr4 (16-96)||(9536757-9536837)
chr4 (1-101)||(9849704-9849804)
chr4 (1-96)||(12616714-12616809)
chr4 (14-96)||(9263352-9263434)
chr4 (16-87)||(10106310-10106381)
chr4 (38-88)||(13588745-13588795)
chr4 (2-88)||(14573450-14573535)
chr4 (7-96)||(11782498-11782587)
chr4 (39-96)||(12246567-12246624)
chr4 (56-96)||(11252131-11252171)
chr4 (50-98)||(12836070-12836118)
chr4 (37-88)||(15047803-15047854)
chr4 (37-88)||(15106570-15106621)
chr4 (14-69)||(16928937-16928992)
chr4 (7-54)||(19603901-19603948)
chr4 (50-96)||(8140460-8140506)
chr4 (50-96)||(8928315-8928361)
chr4 (38-96)||(9054042-9054100)
chr4 (55-96)||(17277899-17277940)
chr4 (29-85)||(20828152-20828208)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-96)||(192122-192217)
[»] chr7 (43 HSPs)
chr7 (1-96)||(11804698-11804793)
chr7 (14-96)||(26249077-26249159)
chr7 (4-96)||(4450674-4450766)
chr7 (1-88)||(18986754-18986841)
chr7 (1-88)||(19001382-19001469)
chr7 (1-96)||(23173687-23173782)
chr7 (1-98)||(10418557-10418654)
chr7 (1-89)||(5236875-5236963)
chr7 (1-89)||(8977479-8977567)
chr7 (1-96)||(3585524-3585619)
chr7 (1-88)||(8052439-8052525)
chr7 (1-96)||(9767785-9767880)
chr7 (1-88)||(10611713-10611800)
chr7 (1-96)||(9078883-9078979)
chr7 (1-96)||(2565906-2566001)
chr7 (1-96)||(2927874-2927969)
chr7 (1-96)||(3173710-3173805)
chr7 (12-99)||(3692759-3692846)
chr7 (1-96)||(13280759-13280854)
chr7 (12-95)||(14195759-14195842)
chr7 (1-96)||(19201458-19201553)
chr7 (5-96)||(39270275-39270365)
chr7 (38-96)||(10332441-10332499)
chr7 (38-88)||(9722478-9722528)
chr7 (39-96)||(1254698-1254754)
chr7 (40-96)||(19154857-19154913)
chr7 (28-96)||(19201324-19201392)
chr7 (40-96)||(20754256-20754312)
chr7 (38-98)||(21707337-21707397)
chr7 (41-96)||(1767416-1767471)
chr7 (50-89)||(15582753-15582792)
chr7 (1-63)||(144976-145038)
chr7 (50-96)||(1810953-1810999)
chr7 (38-88)||(9288947-9288997)
chr7 (38-88)||(9298739-9298789)
chr7 (50-96)||(17887732-17887778)
chr7 (38-91)||(3736373-3736426)
chr7 (37-96)||(1589275-1589335)
chr7 (50-98)||(2505892-2505940)
chr7 (56-96)||(2506822-2506862)
chr7 (60-96)||(4994786-4994822)
chr7 (48-96)||(10414281-10414329)
chr7 (56-92)||(13252713-13252749)
[»] chr6 (34 HSPs)
chr6 (1-96)||(24469798-24469893)
chr6 (1-96)||(14641632-14641727)
chr6 (1-94)||(17822027-17822121)
chr6 (1-96)||(9848163-9848258)
chr6 (4-91)||(22564556-22564643)
chr6 (3-96)||(17384025-17384118)
chr6 (1-88)||(9519732-9519819)
chr6 (1-96)||(14076396-14076491)
chr6 (1-88)||(14723684-14723771)
chr6 (37-96)||(14727170-14727229)
chr6 (1-96)||(24480024-24480119)
chr6 (2-96)||(1636635-1636728)
chr6 (38-99)||(26820897-26820958)
chr6 (1-69)||(19577566-19577634)
chr6 (1-96)||(4340664-4340759)
chr6 (1-96)||(21760409-21760504)
chr6 (1-96)||(22404256-22404351)
chr6 (12-98)||(9841030-9841116)
chr6 (2-96)||(22845853-22845947)
chr6 (1-96)||(14078037-14078133)
chr6 (13-96)||(8038052-8038135)
chr6 (29-96)||(21687131-21687198)
chr6 (38-98)||(2588333-2588393)
chr6 (1-69)||(21060433-21060501)
chr6 (42-89)||(9338987-9339034)
chr6 (1-91)||(21845735-21845826)
chr6 (1-96)||(23644319-23644414)
chr6 (39-88)||(13216314-13216364)
chr6 (39-89)||(27961252-27961302)
chr6 (38-96)||(30356300-30356358)
chr6 (39-95)||(32760007-32760060)
chr6 (1-96)||(19593977-19594073)
chr6 (1-96)||(20004181-20004277)
chr6 (13-88)||(21932486-21932562)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-96)||(4824-4919)
[»] chr2 (25 HSPs)
chr2 (1-86)||(18758301-18758386)
chr2 (14-89)||(23010052-23010127)
chr2 (1-96)||(35680102-35680197)
chr2 (1-98)||(22569054-22569151)
chr2 (13-96)||(17891743-17891826)
chr2 (1-96)||(25886193-25886288)
chr2 (1-96)||(27907524-27907619)
chr2 (1-88)||(28918188-28918275)
chr2 (14-96)||(21905739-21905821)
chr2 (39-96)||(16157086-16157143)
chr2 (1-94)||(24086310-24086403)
chr2 (1-93)||(34574513-34574606)
chr2 (1-96)||(29144634-29144730)
chr2 (1-96)||(25537556-25537651)
chr2 (1-96)||(17350978-17351073)
chr2 (39-96)||(29892228-29892285)
chr2 (13-93)||(16257872-16257952)
chr2 (1-96)||(28930274-28930370)
chr2 (1-96)||(18120547-18120642)
chr2 (1-96)||(25196611-25196706)
chr2 (50-96)||(32130701-32130747)
chr2 (38-96)||(32137914-32137972)
chr2 (50-96)||(32139336-32139382)
chr2 (39-87)||(25882581-25882629)
chr2 (58-98)||(28766909-28766949)
[»] scaffold0451 (2 HSPs)
scaffold0451 (1-93)||(10098-10190)
scaffold0451 (1-96)||(5730-5825)
[»] scaffold0115 (1 HSPs)
scaffold0115 (30-86)||(36143-36199)
[»] scaffold0555 (1 HSPs)
scaffold0555 (9-96)||(6461-6548)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-96)||(23036-23131)
[»] scaffold0043 (1 HSPs)
scaffold0043 (38-96)||(88438-88496)
[»] scaffold0032 (1 HSPs)
scaffold0032 (2-96)||(92830-92924)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-67)||(95624-95690)
[»] scaffold0019 (2 HSPs)
scaffold0019 (37-86)||(35214-35263)
scaffold0019 (38-89)||(24839-24890)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-96)||(41339-41433)
[»] scaffold0386 (1 HSPs)
scaffold0386 (38-96)||(4874-4932)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-88)||(243841-243926)
[»] scaffold0871 (1 HSPs)
scaffold0871 (47-96)||(4004-4053)
[»] scaffold0072 (1 HSPs)
scaffold0072 (39-96)||(38329-38386)


Alignment Details
Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 22797517 - 22797242
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcattacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22797517 cataggcaatcgctctaatacttctcctttttgctaataaaacctatcgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcattacc 22797418  T
Q  101 agccaatccttcttagttccaattatagatgcaattcctgaagcaaatactgaagttggagattctgaagaagaagaagcccatgataattcagaagaag 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22797417 agccaatccttctgagttccaattatagatgcaattcctgaaggaaatactgaagttggagattctgaagaagaagaagcccatgataattcagaagaag 22797318  T
Q  201 ctgctcaatctagaagcaccttcaaatataagtcatctcatccagaggaactaataattggaagtaaagatactcc 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22797317 ctgctcaatctagaagcaccttcaaatataagtcatctcatccagaggaactaataattggaagtaaagatactcc 22797242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 20860339 - 20860434
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | ||||||||||||||||||||||  ||||||||| ||||||| | |||||||||||| || | |||||||||||||||||||||    
T  20860339 cataggcaattgttctaatacttctcctttttgctgctaaaacctactgaaaattaatgaaaaacatgctaacagtaacgtaagatgacctgtcat 20860434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 24162108 - 24162014
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtca 95  Q
    ||||||||||   |||||||||||||| |||||||  ||||| |||||||||||||||||||||||||| || |||||||||| |||||||||||    
T  24162108 cataggcaattattctaatacttctccattttgctggtaaaatctattgaaaatgactgaaaaacatgctaagaataacgtaaaatgacctgtca 24162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23387644 - 23387549
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||||| |||||||||||||||||||||| |  |||||| ||||| ||||| ||||    
T  23387644 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataacataagacgacctatcat 23387549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 34132086 - 34132174
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    |||||||| ||| ||||||||||||||||||||||  ||||||||| |||||||  ||||||||||||| || ||||| ||||||||||    
T  34132086 cataggcagtcgttctaatacttctcctttttgctgctaaaacctaatgaaaatagctgaaaaacatgctaagaataaagtaagatgac 34132174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 25400829 - 25400740
Alignment:
Q  7 caatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||||||| | ||||||||| ||  ||||||||| |||||||||||||||||||||| || |||||||||| ||||||| ||||    
T  25400829 caatcgttctaatattcctcctttttcctgctaaaacctaatgaaaatgactgaaaaacatgctaagaataacgtaaaatgacctctcat 25400740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 19761639 - 19761583
Alignment:
Q  40 aaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19761639 aaacctactgaaaatgactgaataacatgctaataataacgtaagatgacctgtcat 19761583  T

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Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28666492 - 28666584
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgt 93  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||  || |||||| |||||||| ||||    
T  28666492 cataggcagtcattctaatacttctcctttttgctgctaaaacctactgaaaatgaatgaaaaacatgataagaataacataagatgatctgt 28666584  T

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Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29987956 - 29988052
Alignment:
Q  1 cataggcaatcgctctaatacttctccttttt-gctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||| ||||||| ||||||||| | ||||||| |||  ||||| ||| | |||||||||||||||||||| || |||||||||||||||||||||||    
T  29987956 catatgcaatcgttctaatactccaccttttttgctgctaaaatctactaaaaatgactgaaaaacatgctaaaaataacgtaagatgacctgtcat 29988052  T

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Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17469655 - 17469560
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| ||||||||||| |||  |||||||  ||||||||  ||||||||| |||||||||||| || ||||||||||||||  |||||||    
T  17469655 cataggcaattgctctaatactcctctgttttgctggtaaaacctgctgaaaatgattgaaaaacatgctaagaataacgtaagatggtctgtcat 17469560  T

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Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18832222 - 18832317
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||| ||||||||||| |||  ||||| |  |||||||||||||||| ||||||||||||||| || ||||| |||||||||||| ||||    
T  18832222 catagacaattgctctaatactcctctgttttgttggtaaaacctattgaaaaagactgaaaaacatgctaaaaataatgtaagatgacctatcat 18832317  T

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Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19003862 - 19003767
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||| | |||||||||  |||||||||||  ||||||||| ||||||| |||||||||||||| || ||||||||||||| || ||||||    
T  19003862 catagacaattgttctaatactcatcctttttgctgctaaaacctactgaaaataactgaaaaacatgccaagaataacgtaagatcacatgtcat 19003767  T

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Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23214922 - 23214827
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||  |||| ||||| |||||||||| |  ||||   |||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  23214922 cataggcaatttctctcatactcctcctttttgttgctaaactgtattgaaaataactgaaaaacatgctaagaataacgtaagatgacctgtcat 23214827  T

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Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25920831 - 25920928
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    |||||||||| |||||||||||  ||| |||||||  |||| |||| ||||||||||  ||||| |||| || ||||||||||||||| |||||||||    
T  25920831 cataggcaattgctctaatactcatccgttttgctggtaaatcctactgaaaatgacaaaaaaatatgctaagaataacgtaagatgatctgtcatta 25920928  T

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Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23338892 - 23338986
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| |||||||  | | |||||| ||  ||||||||| ||||||||| |||||||||||| || |||||| ||||||||||||||||    
T  23338892 cataggcaatcgttctaatatct-tgcttttttctgctaaaacctaatgaaaatgattgaaaaacatgctaagaataacctaagatgacctgtcat 23338986  T

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Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 19053102 - 19053196
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| | ||||||||| ||||||||||||   |||| ||| ||||||| ||||| |||||||| || |||||||||| ||||| ||||||    
T  19053102 ataggcaattgttctaatactcctcctttttgctgtaaaaatctactgaaaataactgataaacatgctaagaataacgtaaaatgacatgtcat 19053196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 23266853 - 23266911
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||||| |||||||||| || ||||| |||||||||||||||||    
T  23266853 taaaacctactgaaaatgactaaaaaacatgccaaaaataatgtaagatgacctgtcat 23266911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 25572540 - 25572480
Alignment:
Q  36 aataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||| ||||| |||||||||||||||| || ||||||||| |||||| ||||||    
T  25572540 aataaaacctactgaaattgactgaaaaacatgctaagaataacgtaggatgacttgtcat 25572480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 34488885 - 34488948
Alignment:
Q  29 ttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctg 92  Q
    |||||||  |||| |||| | |||||||||||||||||||| || |||||||||||||||||||    
T  34488885 ttttgctggtaaatcctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctg 34488948  T

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Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 24320605 - 24320523
Alignment:
Q  15 ctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaa-catgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| | ||||||||||  ||||||||| ||||||||| | ||||| ||||  || |||||||||||||||||||||||    
T  24320605 ctaatactccgcctttttgctgctaaaacctactgaaaatgaataaaaaaacatgttaagaataacgtaagatgacctgtcat 24320523  T

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Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 15691305 - 15691361
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtc 94  Q
    ||||||||| ||||||||||| ||||| |||| || |||||||||||||||| ||||    
T  15691305 taaaacctactgaaaatgactaaaaaatatgctaagaataacgtaagatgacatgtc 15691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 24263810 - 24263750
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    ||||||||| | |||  ||||||||||||||| || |||||||||||||||||| ||||||    
T  24263810 taaaacctactaaaatagactgaaaaacatgctaagaataacgtaagatgacctatcatta 24263750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26122382 - 26122477
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||| ||||||||||| |||  |||||||  ||||||||| | |||| |||| |||||||||| || |||||  |||||| |||||||||    
T  26122382 catagacaattgctctaatactcctctgttttgctggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaagataacctgtcat 26122477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 24658383 - 24658301
Alignment:
Q  15 ctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacat-gcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| ||||||||||||  ||||||||| | ||||||| |||||||||  |  || |||||||||||||||||| ||||    
T  24658383 ctaatactcctcctttttgctgctaaaacctactaaaaatgattgaaaaacaaagttaaaaataacgtaagatgacctttcat 24658301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 26348479 - 26348537
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| ||| || ||||||||||||||||| | || |||||||||| ||||||||||||    
T  26348479 taaaatctactggaaatgactgaaaaacatactaagaataacgtaaaatgacctgtcat 26348537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 31600135 - 31600077
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||  ||||| |||| |||||||||| || |||||||||||| ||||||||||    
T  31600135 taaaacctacggaaaaagacttaaaaacatgctaagaataacgtaagaggacctgtcat 31600077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 18939574 - 18939615
Alignment:
Q  55 gactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||||||  || |||||||||||||||||||||||    
T  18939574 gactgaaaaacatgttaagaataacgtaagatgacctgtcat 18939615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 23110282 - 23110205
Alignment:
Q  12 gctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    ||||||||||| |||  |||||||  |||||||||  || ||||||| |||||||||  || ||||||||||||||||    
T  23110282 gctctaatactcctctgttttgctgttaaaacctaccgataatgactaaaaaacatgttaagaataacgtaagatgac 23110205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 24513238 - 24513201
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctgt 93  Q
    |||||||||||||| || ||||||||||||||||||||    
T  24513238 actgaaaaacatgctaagaataacgtaagatgacctgt 24513201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 24849602 - 24849569
Alignment:
Q  66 atgcgaataataacgtaagatgacctgtcattac 99  Q
    ||||||| ||||||||||||||||||||||||||    
T  24849602 atgcgaagaataacgtaagatgacctgtcattac 24849569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 17831741 - 17831788
Alignment:
Q  48 tgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| ||||||||||||| || |||||||||||||||| ||||||    
T  17831741 tgaaaatg-ctgaaaaacatgctaagaataacgtaagatgacatgtcat 17831788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 20548495 - 20548455
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||| |  |||||||||||||||||||||||    
T  20548495 actgaaaaacatgctaggaataacgtaagatgacctgtcat 20548455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 21352970 - 21353010
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||| || |||||| ||||||||||||||||    
T  21352970 actgaaaaacatgctaagaataacataagatgacctgtcat 21353010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21663187 - 21663092
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| |||||||||||||||||||| |  ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||    
T  21663187 cataggcaatcgttctaatacttctcctttttgatgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcat 21663092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 729136 - 729231
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||||| ||||||||| ||||||||||||  ||||||||| |||||||||||||||| ||||| || |||||||||||||||||| ||||    
T  729136 catagacaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaagcatgctaagaataacgtaagatgacctttcat 729231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15542405 - 15542310
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| || |||||||||  ||||||||| |||||||||||||||||||||  || |||||||||||||||| ||||||    
T  15542405 cataggcaatcgttctaatactcctactttttgctgctaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcat 15542310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 277
Target Start/End: Complemental strand, 23391217 - 23391107
Alignment:
Q  167 gaagaagaagaagcccatgataattcagaagaagctgctcaatctagaagcaccttcaaatataagtcatctcatccagaggaactaataattggaagta 266  Q
    ||||||||||||||||| |||||||||| ||||| | ||||||| ||||| ||||||||||| |||| ||| | |||||| || || |||||||||||||    
T  23391217 gaagaagaagaagcccaagataattcaggagaagttactcaatccagaagaaccttcaaatacaagttatcacgtccagaagagcttataattggaagta 23391118  T
Q  267 aagatactcct 277  Q
    |||||| ||||    
T  23391117 aagatagtcct 23391107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18527593 - 18527498
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||  ||||||||| |||||||||||   ||||||||||||||||||| ||||||| |||| || |||||||||||||||| ||||||    
T  18527593 cataggcaatcattctaatactcctcctttttgccgctaaaacctattgaaaatgagtgaaaaagatgctaagaataacgtaagatgacttgtcat 18527498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 14782544 - 14782625
Alignment:
Q  15 ctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| | ||||||||||||  ||||||||||||||| ||| |||||||||||| || |||||||||||||||||||||||    
T  14782544 ctaatagtcctcctttttgctgctaaaacctattgaaattgagtgaaaaacatgctaagaataacgtaagatgacctgtcat 14782625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21450767 - 21450862
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||  || |||||| ||||||||||||  ||||||||| ||||||||||||| |||||||| ||  ||||| ||||||||||||||||    
T  21450767 cataggcaatctttccaatactcctcctttttgctgctaaaacctactgaaaatgactgagaaacatgctaaagataacttaagatgacctgtcat 21450862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 12210278 - 12210360
Alignment:
Q  14 tctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||||||  ||||||||| ||||| |||||||||||||||| || ||||| |||||||||||| ||||    
T  12210278 tctaatactcctcctttttgctgctaaaacctactgaaattgactgaaaaacatgctaagaataatgtaagatgacctatcat 12210360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 27973319 - 27973388
Alignment:
Q  17 aatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagat 86  Q
    |||||| ||||||||||||  ||||||||| |||||||||||||||||||||| || |||||||||||||    
T  27973319 aatactcctcctttttgctgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagat 27973388  T

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Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 26647443 - 26647359
Alignment:
Q  12 gctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||| |||| ||||| |  ||||||||| |||||| |||||||||| |||| || |||||||||||||||||||||||    
T  26647443 gctctaatactcctccgttttgttggtaaaacctactgaaaaagactgaaaaatatgctaagaataacgtaagatgacctgtcat 26647359  T

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Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 28009747 - 28009839
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtc 94  Q
    ||||||||| |||||||| || ||||||||||||  |||||| ||  ||||||||||||||||||||| || ||||| |||||||||| ||||    
T  28009747 ataggcaattgctctaatgctcctcctttttgctgctaaaacttagcgaaaatgactgaaaaacatgctaagaataatgtaagatgacatgtc 28009839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21848626 - 21848711
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagat 86  Q
    |||| ||||| ||||||||||| |||  |||||||||||| ||||||| |||| ||||||||||||||| || |||||| ||||||    
T  21848626 cataagcaattgctctaatactcctctgttttgctaataacacctattaaaaacgactgaaaaacatgctaagaataacataagat 21848711  T

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Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22507479 - 22507383
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgact-gaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| |||||||||||   ||||||||| ||||||| |||  |||||||||| || ||||||||||||| || ||||||    
T  22507479 cataggcaatcgttctaatactcctcctttttgccgctaaaacctaatgaaaataactaaaaaaacatgctaagaataacgtaagatcacatgtcat 22507383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18734682 - 18734587
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||||||||||||  |||| |||| | ||    |||||||||||||| || ||||||||||||| |||||||||    
T  18734682 cataggcaatcgttctaatactcctcctttttgctgttaaatcctactaaagtaaactgaaaaacatgctaagaataacgtaagataacctgtcat 18734587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18832215 - 18832310
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||||| ||||||||| ||||||||||||  ||| ||||| | ||| | |||||||||||||| || || ||| ||||||||||||||||    
T  18832215 cataggtaatcgttctaatactcctcctttttgctgctaagacctaattaaagtaactgaaaaacatgctaagaagaacctaagatgacctgtcat 18832310  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 9783075 - 9782981
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| |||||||||||||||   |||||   ||||||||| | |||  || |||||||||||| |||||||||||||||||| |||||||    
T  9783075 ataggcaattgctctaatacttctctggtttgcaggtaaaacctactaaaatagattgaaaaacatgctaataataacgtaagatgatctgtcat 9782981  T

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Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 15158872 - 15158790
Alignment:
Q  14 tctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||||||  |||| |||| | ||||| |||||||||||||| || ||||||||||  |||||||||||    
T  15158872 tctaatactcctcctttttgctgctaaatcctacttaaaataactgaaaaacatgctaagaataacgtaatttgacctgtcat 15158790  T

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Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 24464652 - 24464709
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||| ||| ||||||||||||||||||| || |||||||||||||||| ||||||    
T  24464652 aaaacctgttggaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcat 24464709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15571785 - 15571698
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    ||||| |||| | ||||||||| |||   ||||||| ||||||||| | ||| |||||||||||||||| || |||||||||||||||    
T  15571785 catagacaattgatctaatactcctctgctttgctagtaaaacctactaaaattgactgaaaaacatgctaaaaataacgtaagatga 15571698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16363623 - 16363710
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||||||| | ||||||||| |||  ||||| |  ||||| ||| |||||||||||| ||||||||| || |||||||||||||||    
T  16363623 cataggcaattgatctaatactcctctattttgttggtaaaaactactgaaaatgactggaaaacatgctaaaaataacgtaagatga 16363710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21333168 - 21333073
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| | ||||||||||||||||| ||  ||||||||||||||| | | || |||||||   || |||||| ||||||||| ||||||    
T  21333168 cataggcaatcgttttaatacttctcctttttcctgctaaaacctattgaaactaagtgcaaaacatattaagaataacataagatgacatgtcat 21333073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22426612 - 22426517
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||||||||||||  ||   |||| | |||   |||||||||||||| || ||| |||||||||||||||||||    
T  22426612 cataggcaatcgttctaatactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaatgacgtaagatgacctgtcat 22426517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 24901222 - 24901297
Alignment:
Q  14 tctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    |||||||||||||  |||||||  ||||| ||| ||||||||| ||||||| |||| || ||||||||||||||||    
T  24901222 tctaatacttctctgttttgctggtaaaatctactgaaaatgattgaaaaatatgctaaaaataacgtaagatgac 24901297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26611428 - 26611333
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||  || |||||| ||||||||||||  |||| |||| | | | | | |||||||||||| || |||||||||||||||||||||||    
T  26611428 cataggcaatcattccaatactcctcctttttgctgctaaatcctactaatattaattgaaaaacatgctaagaataacgtaagatgacctgtcat 26611333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 33192389 - 33192447
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||| |||||||||||||||| || |||| ||||||||||| ||||||    
T  33192389 taaaacctactgaaattgactgaaaaacatgctaagaatagcgtaagatgacttgtcat 33192447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 25402526 - 25402437
Alignment:
Q  7 caatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||||||||| ||| ||||||||  |||| |||| | |||   |||||||||||||| || ||||||| |||||||||||||||    
T  25402526 caatcgttctaatactcctcttttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgcaagatgacctgtcat 25402437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 35133886 - 35133979
Alignment:
Q  3 taggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||  || ||||||| |||| ||||| |  ||||||||| | |||| ||||||||||||||| |   ||||||||||||||||||||||    
T  35133886 taggcaattactttaatactcctccattttgttggtaaaacctactaaaaaagactgaaaaacatgctacagataacgtaagatgacctgtcat 35133979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 17543181 - 17543122
Alignment:
Q  32 tgctaataaaacctattgaaaatgactgaaaa--acatgcgaataataacgtaagatgac 89  Q
    ||||| ||||||||||||||||||||| ||||  |||||| || ||||||||||||||||    
T  17543181 tgctattaaaacctattgaaaatgactaaaaaagacatgctaaaaataacgtaagatgac 17543122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 22621832 - 22621888
Alignment:
Q  40 aaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||| | |||||||||||||||||||| || ||| ||||||||| |||||||||    
T  22621832 aaacctactaaaaatgactgaaaaacatgctaagaattacgtaagataacctgtcat 22621888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44797117 - 44797213
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattg-aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||  ||||||||||||||  ||||  |  | |||||||||| |||| ||||||||||||||| || ||||| ||||||||| |||||||    
T  44797117 cataggcaattactctaatacttctctgttttattcgtgaaacctattggaaaaagactgaaaaacatgctaagaataatgtaagatgatctgtcat 44797213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 11845282 - 11845223
Alignment:
Q  37 ataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | ||||| ||||||||| |||| || ||||||||||||||| |||||||    
T  11845282 ataaaacctactaaaaataactgaaaaatatgctaagaataacgtaagatgatctgtcat 11845223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18827396 - 18827491
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||  |||||||||  |||||| | ||  ||| ||||| | ||||| |||||||||||||  || ||||||||||||||||| |||||    
T  18827396 cataggcaatcattctaatactcatcctttctcctgctaagacctaattaaaataactgaaaaacatgttaagaataacgtaagatgaccagtcat 18827491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 7221562 - 7221604
Alignment:
Q  47 ttgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    ||||||||||||||||||||||  || ||||||||||||||||    
T  7221562 ttgaaaatgactgaaaaacatgttaagaataacgtaagatgac 7221604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 14235343 - 14235293
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    |||||||| | |||||||||||||||||||| || | ||||||||||||||    
T  14235343 aaaacctactaaaaatgactgaaaaacatgctaagagtaacgtaagatgac 14235293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 27912113 - 27912159
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||||||||  || |||||||||||||||| ||||||    
T  27912113 aaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcat 27912159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 21536954 - 21536913
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacct 91  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  21536954 aaaatgactgaaaaatatgctaaaaataacgtaagatgacct 21536913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12011281 - 12011213
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgc 69  Q
    |||||||||| |||||||||||  | | |||||||  ||||||||| ||||||||  ||||||||||||    
T  12011281 cataggcaattgctctaatactcattcgttttgctggtaaaacctactgaaaatgtgtgaaaaacatgc 12011213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 16114847 - 16114895
Alignment:
Q  48 tgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| |||||||||||| || ||||||||||||| | |||||||    
T  16114847 tgaaaatgattgaaaaacatgctaagaataacgtaagataatctgtcat 16114895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 26022440 - 26022480
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||| || ||||||||||||| |||||||||    
T  26022440 actgaaaaacatgctaagaataacgtaagatcacctgtcat 26022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 26652613 - 26652669
Alignment:
Q  40 aaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||| | ||||| |||||||||||||| || ||||||||| |||||| ||||||    
T  26652613 aaacctactaaaaataactgaaaaacatgctaaaaataacgtaggatgacatgtcat 26652669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 12517290 - 12517385
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||  ||||||||| ||||||||||||| ||||||||| ||||||||||||||||| |||| || |||||||||||||||||||||||    
T  12517290 cataggcaatcattctaatactcctcctttttgctactaaaacctactgaaaatgactgaaaaagatgctaagaataacgtaagatgacctgtcat 12517385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34276534 - 34276439
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| | ||||||| ||||||||||||  ||||||||| ||||||||||||||||| |||| || |||||||||| ||||||||||||    
T  34276534 cataggcaatcgttataatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaaaatgacctgtcat 34276439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 19912586 - 19912675
Alignment:
Q  7 caatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||||||||| ||| ||||||||  ||||||||| ||||||||||||||||| |||| || |||||||||||||||||||||||    
T  19912586 caatcgttctaatactcctcttttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaagatgacctgtcat 19912675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8115391 - 8115296
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||| | ||||| |||| ||||||||| || ||||||||||||||  |||||||    
T  8115391 cataggcaatcgttctaatactcctcctttttgctactaaaacctactcaaaataactggaaaacatgctaaaaataacgtaagatggtctgtcat 8115296  T

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Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18457208 - 18457108
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcattacc 100  Q
    |||||||||| | ||||||||| ||||||||||||  ||||||||| ||||||| |||||| ||||| | || |||| |||||||||||||||||| |||    
T  18457208 cataggcaattgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaataacatcctaagaatagcgtaagatgacctgtcatcacc 18457109  T
Q  101 a 101  Q
    |    
T  18457108 a 18457108  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8765674 - 8765761
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||| ||||| ||||||||| ||| |||||||   |||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  8765674 cataggaaatcgttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaggatga 8765761  T

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Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8770564 - 8770651
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||| ||||| ||||||||| ||| |||||||   |||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  8770564 cataggaaatcgttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaggatga 8770651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 1096857 - 1096763
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| |||| || | ||||||||||||  ||||||  | ||||||||||| |||||||||| || |||||||||||||||||||||||    
T  1096857 cataggcaatcgttctagtaatcctcctttttgctgctaaaactgactgaaaatgact-aaaaacatgcaaagaataacgtaagatgacctgtcat 1096763  T

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Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22470499 - 22470404
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||| ||||| ||||||| ||| |||  |||||||  |||||| || |||||||||||||||||||||| || |||||||||||||||| ||||||    
T  22470499 catatgcaattgctctaacactcctctgttttgctggtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcat 22470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 8145248 - 8145342
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtca 95  Q
    |||||||||| | | ||||||| ||| ||||||||  ||||||||| ||||| ||| |||||||||||| || ||||| ||||||||||||||||    
T  8145248 cataggcaattgttttaatactcctcatttttgctgctaaaacctactgaaattgattgaaaaacatgctaagaataatgtaagatgacctgtca 8145342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 20886905 - 20886963
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||||| || |||||||||||| || |||||||||||||||||||||||    
T  20886905 taaaacctattgaaaacgattgaaaaacatgctaagaataacgtaagatgacctgtcat 20886963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22246997 - 22247090
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtca 95  Q
    ||||| |||| ||||||||||| |||  |||||||  ||||||||| ||||||||||||||||| |||| || |||||||||||||||| |||||    
T  22246997 catagtcaattgctctaatactcctctattttgctggtaaaacctactgaaaatgactgaaaaa-atgctaagaataacgtaagatgacatgtca 22247090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 25851045 - 25850952
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtc 94  Q
    |||||||||||| | ||||||| ||||||| ||||  |||| |||| | ||||| |||||||||||||| || |||||| ||||||||||||||    
T  25851045 cataggcaatcgttttaatactcctcctttctgctgctaaatcctactaaaaataactgaaaaacatgctaagaataacataagatgacctgtc 25850952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 12771292 - 12771209
Alignment:
Q  8 aatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacct 91  Q
    ||||| |||||||||  || ||||||||  |||||  || |||||||||||||||||||||| || ||||||||||||||||||    
T  12771292 aatcgttctaatactcatcatttttgctgctaaaatatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacct 12771209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 16242290 - 16242196
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| || |||||| ||  |||||| || | ||||||| ||||||| |||| || |||||||||||||||||||||||    
T  16242290 cataggcaatcgttctaatactccttcttttttctgctaaaac-tactaaaaatgagtgaaaaatatgctaagaataacgtaagatgacctgtcat 16242196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 52935602 - 52935535
Alignment:
Q  29 ttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||  ||||||||| ||||||||| |||||||||||| || |||||||||||||||||| ||||    
T  52935602 ttttgctggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctatcat 52935535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 819906 - 819848
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  819906 taaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacctatcat 819848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 7805779 - 7805837
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| || ||||||||| |||||||||||| || |||||||||||||||||||||||    
T  7805779 taaaacatactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctgtcat 7805837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 12372416 - 12372338
Alignment:
Q  14 tctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctg 92  Q
    ||||||||| ||||||||||||  ||||||||| ||||||||| ||||||| |||| || ||| ||||||||| |||||    
T  12372416 tctaatactcctcctttttgctcgtaaaacctactgaaaatgattgaaaaaaatgctaagaattacgtaagataacctg 12372338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 3114806 - 3114715
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctg 92  Q
    ||||||||||  |||||||||| |||  |||||||  ||||||||| || ||| ||||||||||||||| || |||||||| | ||||||||    
T  3114806 cataggcaattactctaatactcctctgttttgctggtaaaacctactgtaaaagactgaaaaacatgctaagaataacgtcacatgacctg 3114715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 5521551 - 5521621
Alignment:
Q  29 ttttgctaataaaacctattgaaaatgactgaaaaacatgcgaat------aataacgtaagatgacctgt 93  Q
    |||||||  |||||||||||||||||||||||||||||||| |||      ||||||||||||||||||||    
T  5521551 ttttgctggtaaaacctattgaaaatgactgaaaaacatgctaatgctaagaataacgtaagatgacctgt 5521621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 13938939 - 13938848
Alignment:
Q  5 ggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| ||||||||| |||||||||| |  ||||||||| ||||| ||  | || ||||||| || |||||||||| ||||||||||||    
T  13938939 ggcaatcgttctaatactcctcctttttggtgctaaaacctactgaaattgctttaacaacatgctaagaataacgtaaaatgacctgtcat 13938848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18535770 - 18535865
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||| ||||| | ||||||||| |||   ||||||  ||||||||| | ||| |||||||||||||||| || |||||||||||||||| ||||||    
T  18535770 cataagcaattgatctaatactcctctgctttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacttgtcat 18535865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 20891705 - 20891651
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctg 92  Q
    ||||||||| |||||| |||||||||| |||| || |||||||||||||||||||    
T  20891705 taaaacctactgaaaacgactgaaaaatatgctaagaataacgtaagatgacctg 20891651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 2166125 - 2166037
Alignment:
Q  7 caatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| | ||||||| |||||||||| |  ||||||||| ||||||||||  |||||||||| || |||||||||  ||||||||||||    
T  2166125 caatcgttttaatactcctcctttttgttgctaaaacctactgaaaatgaca-aaaaacatgccaagaataacgtatcatgacctgtcat 2166037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 22450486 - 22450539
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacct 91  Q
    ||||||||| |||||| ||||||||| ||||| || ||||||||||||||||||    
T  22450486 taaaacctaatgaaaacgactgaaaagcatgctaagaataacgtaagatgacct 22450539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 2508792 - 2508728
Alignment:
Q  25 tcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    ||||||| |||  |||||| || |||||||||||||||||||| | || ||||||||||||||||    
T  2508792 tccttttcgctgttaaaacttactgaaaatgactgaaaaacatactaagaataacgtaagatgac 2508728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 14977806 - 14977905
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcattacc 100  Q
    |||||||||| | | ||||||| ||||||||||||| |||| | || | |||   ||||||||| |||| || ||||||||||||||  |||||||||||    
T  14977806 cataggcaattgttataatactcctcctttttgctactaaatcatactaaaataaactgaaaaatatgctaagaataacgtaagatggtctgtcattacc 14977905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 23168534 - 23168488
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||||||| ||||||| | ||||||||||||| |||||||    
T  23168534 aaaatgactgaaaaatatgcgaagagtaacgtaagatgatctgtcat 23168488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 27852663 - 27852605
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||||| ||| |||||| || |||||||||||| ||| ||||||    
T  27852663 taaaacctactgaaaatgactaaaagacatgctaaaaataacgtaagacgacatgtcat 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 31283963 - 31283905
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| | ||||||| |||||||||||  || |||||||| ||||||||||||||    
T  31283963 taaaacctacttaaaatgattgaaaaacatgataagaataacgttagatgacctgtcat 31283905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 19387928 - 19387871
Alignment:
Q  29 ttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagat 86  Q
    |||||||  ||||||||| ||||||||||||||||||| || || |||||| ||||||    
T  19387928 ttttgctggtaaaacctactgaaaatgactgaaaaacaagctaaaaataacataagat 19387871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20431472 - 20431517
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaaccta 46  Q
    |||||||||||| ||||||||| ||||||||||||  |||||||||    
T  20431472 cataggcaatcgttctaatactcctcctttttgctgctaaaaccta 20431517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 15669388 - 15669340
Alignment:
Q  48 tgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||||||||| ||||| || ||||| |||||||||||||||||    
T  15669388 tgaaattgactgaaaatcatgccaagaataatgtaagatgacctgtcat 15669340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 16228386 - 16228346
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| ||||| || |||||||||||||||||||||||    
T  16228386 actgaaaagcatgctaagaataacgtaagatgacctgtcat 16228346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 17135107 - 17135159
Alignment:
Q  16 taatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatg 68  Q
    ||||||| |||  |||||||| ||||||||| | |||||||||||||||||||    
T  17135107 taatactcctctattttgctagtaaaacctactaaaaatgactgaaaaacatg 17135159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 27074007 - 27074047
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||| || |||||||||||||||||| ||||    
T  27074007 actgaaaaacatgctaaaaataacgtaagatgacctatcat 27074047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 27412700 - 27412660
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  27412700 actgaaaaacatgctaaaaataacgtaagatgacttgtcat 27412660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13313368 - 13313273
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | ||||||||| ||||||||||||  |||||||||||||||||||||||||||||||| || |||||||||||| ||| ||||||    
T  13313368 cataggcaattgttctaatactcctcctttttgctgctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaagacgacatgtcat 13313273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 29381058 - 29380962
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgact-gaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||| |  |||||||||| || |||||||||||||||||||||||    
T  29381058 cataggcaatcgttctaatactcctcctttttgctactaaaacctattgaaattgaataaaaaaacatgctaagaataacgtaagatgacctgtcat 29380962  T

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Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 20400334 - 20400429
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||||| ||||||||| ||||||||||||  ||||||| | |||||||||||||||| ||||| || |||||||||||||||||||||||    
T  20400334 cataggaaatcgttctaatactcctcctttttgctgctaaaacccactgaaaatgactgaaaagcatgctaagaataacgtaagatgacctgtcat 20400429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24583268 - 24583171
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    |||||||||||| ||||||||| ||||||||||||  ||||| ||| | |||||||||||||||||||| || |||||| ||| ||||||||||||||    
T  24583268 cataggcaatcgttctaatactcctcctttttgctgctaaaatctactaaaaatgactgaaaaacatgctaagaataacataaaatgacctgtcatta 24583171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17510904 - 17510999
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| |||||||||||   ||||||||| ||||| |||||||||||||||| || ||||| |||||||||||| ||||    
T  17510904 cataggcaatcgttctaatactcctcctttttgcagctaaaacctactgaaagtgactgaaaaacatgctaagaataatgtaagatgacctatcat 17510999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19704986 - 19705081
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| || |||| ||||  ||||||||| |||||||||||||||||||| | || |||||||||||||||| ||||||    
T  19704986 cataggcaatcgttctaatactccttctttatgctgttaaaacctactgaaaatgactgaaaaacatactaagaataacgtaagatgacatgtcat 19705081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15176529 - 15176439
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacct 91  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||||| ||||| ||||||||| |||||| || ||||| ||||||||||||    
T  15176529 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaacacatgctaagaataatgtaagatgacct 15176439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 29765489 - 29765393
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaa-catgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||   |||||||||||  ||||||||| ||||||| ||| ||||| ||||| || |||||||||||||||||||||||    
T  29765489 cataggcaatcgttctaatacacttcctttttgctgctaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacctgtcat 29765393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14271841 - 14271936
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||  |||||||||| ||   |||||||| ||||||||| |||||| |  |||||||||||| || |||||||||||||||||||||||    
T  14271841 cataggcaattactctaatactcctttgttttgctagtaaaacctactgaaaaaggttgaaaaacatgctaagaataacgtaagatgacctgtcat 14271936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23867926 - 23867831
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||| | ||||||  ||||||||| | |||||| ||||||||||| | || ||| |||||||||||||||||||    
T  23867926 cataggcaatcgttctaatactcctcgtctttgctgctaaaacctactaaaaatgcctgaaaaacatactaagaattacgtaagatgacctgtcat 23867831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 24520098 - 24520019
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgt 81  Q
    ||||||||| | |||||||||| |||||||||||| |||| |||| ||||||| |||||||||||||| || ||||||||    
T  24520098 ataggcaattgttctaatacttatcctttttgctactaaatcctactgaaaataactgaaaaacatgctaagaataacgt 24520019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28621604 - 28621699
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| |||||||||  | ||||||  |  ||||||||| ||||||| |||||||||||||| || |||||||| ||||||||||||||    
T  28621604 cataggcaatcgttctaatactcattcttttttatgctaaaacctaatgaaaataactgaaaaacatgctaagaataacgttagatgacctgtcat 28621699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 17100287 - 17100208
Alignment:
Q  17 aatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||||||||  ||||||||  ||||||| | |||||||||||| || |||||| | ||||||||||||||    
T  17100287 aatacttctcctttttgctgctaaaaccttatgaaaataattgaaaaacatgctaagaataacttgagatgacctgtcat 17100208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18446956 - 18446861
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||| | ||||||||| ||||||||||||  |||| |||| || |||| |||||||||||||  || |||||||||||||||||| ||||    
T  18446956 cataggaaatggttctaatactcctcctttttgctgctaaatcctactggaaataactgaaaaacatggtaaaaataacgtaagatgacctatcat 18446861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19265822 - 19265917
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | ||||||||| |||||||||| |  |||| |||| | |||   |||||||||||||| || |||||||||||||||||||||||    
T  19265822 cataggcaattgttctaatactcctcctttttgttgttaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcat 19265917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24090975 - 24090892
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaag 84  Q
    |||||||||| | |||||||||  |||||||||||  ||||||||| | ||||| |||||||||||||| || |||||||||||    
T  24090975 cataggcaattgttctaatactcttcctttttgctgctaaaacctaattaaaataactgaaaaacatgctaagaataacgtaag 24090892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 4007235 - 4007153
Alignment:
Q  14 tctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| |||  |||||||  | ||||||| | |||||||||||||||||||| |||| |||| ||||||||||||||||    
T  4007235 tctaatactcctctattttgctggtgaaacctactaaaaatgactgaaaaacatgctaatattaacataagatgacctgtcat 4007153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 24389757 - 24389851
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| | ||||||||| ||| |||||| |  ||||||||| ||||||| ||| |||||| | | || |||||||||||||||||||||||    
T  24389757 ataggcaattgttctaatactcctcatttttgttgctaaaacctactgaaaataactaaaaaacttactaagaataacgtaagatgacctgtcat 24389851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 30117727 - 30117661
Alignment:
Q  29 ttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtca 95  Q
    |||||||  ||||||||| ||||||||| |||||||||||| || ||||||||||||| ||||||||    
T  30117727 ttttgctggtaaaacctactgaaaatgaatgaaaaacatgctaaaaataacgtaagataacctgtca 30117661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 21695472 - 21695415
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| ||||| |||||||||||||||| || |||||||||||||||| ||||||    
T  21695472 aaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacatgtcat 21695415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24380450 - 24380362
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    |||||||||| | ||||||||| |||  || ||||  ||||||||| ||||| ||| |||||||||||| || ||||||||||||||||    
T  24380450 cataggcaattgttctaatactcctctgttctgctggtaaaacctactgaaattgagtgaaaaacatgctaagaataacgtaagatgac 24380362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 17976278 - 17976328
Alignment:
Q  48 tgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    ||||||||||| |||||||||| || |||||||||||||||||| ||||||    
T  17976278 tgaaaatgactaaaaaacatgctaaaaataacgtaagatgacctttcatta 17976328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 19791430 - 19791488
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||| |||  ||||||||||||||| ||| |||||||||||||| |||||||    
T  19791430 taaaacctattaaaatagactgaaaaacatgctaattataacgtaagatgatctgtcat 19791488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 24908941 - 24908999
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||||||| ||| |||||||||||| || ||||||||||  |||||||||||    
T  24908941 taaaacctattgaaattgattgaaaaacatgctaaaaataacgtaatttgacctgtcat 24908999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 24911162 - 24911220
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||||||| ||| |||||||||||| || ||||||||||  |||||||||||    
T  24911162 taaaacctattgaaattgattgaaaaacatgctaaaaataacgtaatttgacctgtcat 24911220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 13833653 - 13833605
Alignment:
Q  48 tgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||||||||||| || ||||||||||||| || ||||||    
T  13833653 tgaaaatgactgaaaaacatgcaaagaataacgtaagattacttgtcat 13833605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 24382046 - 24381986
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    ||||||||| ||||||||||| ||| |||||| || ||||||| |||||||||| ||||||    
T  24382046 taaaacctactgaaaatgactaaaatacatgctaagaataacgaaagatgacctatcatta 24381986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 34499239 - 34499311
Alignment:
Q  12 gctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaag 84  Q
    |||||||||||  |||||||||||  ||||| ||| | ||||||||||||| |||||| || |||||||||||    
T  34499239 gctctaatactcatcctttttgctggtaaaatctaataaaaatgactgaaagacatgctaaaaataacgtaag 34499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 26829508 - 26829465
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctgtcattac 99  Q
    |||||||||||||| || |||||||||||||||| |||||||||    
T  26829508 actgaaaaacatgctaagaataacgtaagatgacgtgtcattac 26829465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 21316840 - 21316878
Alignment:
Q  58 tgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| || |||||||||||||||||||||||    
T  21316840 tgaaaaacatgctaagaataacgtaagatgacctgtcat 21316878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 5151957 - 5152014
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| | ||||||| |||||||||||||  || |||||||||||||||| ||||||    
T  5151957 aaaaccaactgaaaattactgaaaaacatgttaagaataacgtaagatgacttgtcat 5152014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 25227301 - 25227354
Alignment:
Q  43 cctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||| ||||||| |||||||||| ||| || ||||| |||||||||||||||||    
T  25227301 cctactgaaaataactgaaaaacctgctaagaataatgtaagatgacctgtcat 25227354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 15557405 - 15557461
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtca 95  Q
    |||||||| |||||||||||||||||||  | || ||||| |||||||||| |||||    
T  15557405 aaaacctactgaaaatgactgaaaaacagactaagaataatgtaagatgacatgtca 15557461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 17650008 - 17650056
Alignment:
Q  48 tgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||||||||||||||  || |||||||||||||||| ||||||    
T  17650008 tgaaaacgactgaaaaacatgttaagaataacgtaagatgacttgtcat 17650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 18007573 - 18007620
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagat 86  Q
    ||||||||| ||||||||||||||||| |||| || |||||||||||||    
T  18007573 taaaacctactgaaaatgactgaaaaa-atgctaacaataacgtaagat 18007620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 24105576 - 24105520
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtc 94  Q
    |||| |||| ||| ||| |||||||||||||| ||  ||||||||||||||||||||    
T  24105576 taaatcctactgagaataactgaaaaacatgctaagcataacgtaagatgacctgtc 24105520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17335452 - 17335357
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||||||||||||  |||||| || |||||||||||||||||||||| || |||||||||||||||| ||||||    
T  17335452 cataggcaatcgttctaatactcctcctttttgcttctaaaacttactgaaaatgactgaaaaacatgccaagaataacgtaagatgacatgtcat 17335357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 15166471 - 15166563
Alignment:
Q  4 aggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||| ||| ||||||||  ||||||||| |||||||||||||||||||||| || ||||| |||||||||||||||||    
T  15166471 aggcaatcgttctaatactcctcgtttttgctgctaaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcat 15166563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18750824 - 18750919
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| ||||||||||| ||||||||||||  |||| |||| ||||||| ||||||||| |||| || ||||| |||||||||| ||||||    
T  18750824 cataggcaattgctctaatactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtcat 18750919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19556636 - 19556543
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| | |||| ||| |  |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  19556636 cataggcaatcgttctaatactcc-ccttattggtgctaaaacctattgaaaatgactgaaaa-catgctaagaataacgtaagatgacctgtcat 19556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22171748 - 22171843
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||  ||||||||| ||||||||||||  ||||||||| |||||||  | ||||||||||| || ||||| |||||||||||||||||    
T  22171748 cataggcaatcattctaatactcctcctttttgctgctaaaacctaatgaaaatagcagaaaaacatgctaagaataatgtaagatgacctgtcat 22171843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7583792 - 7583876
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaaga 85  Q
    |||||||||| | ||||||||| ||||||||||||  ||||||||| ||||||||| ||||||| |||| || ||||||||||||    
T  7583792 cataggcaattgttctaatactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaaga 7583876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17218529 - 17218623
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||||||||||||   ||||| || ||||  |||||||||||||||| || |||||||||||||||||| ||||    
T  17218529 cataggcaatcgttctaatactcctcctttttgcttcgaaaacttactgaat-tgactgaaaaacatgctaagaataacgtaagatgacctatcat 17218623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 25025134 - 25025201
Alignment:
Q  29 ttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||  ||||||||| | |||||||||||||||||||| || |||||||||||||||||||||||    
T  25025134 ttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcat 25025201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 17434471 - 17434529
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||||| |||||||||| || |||||||||||||||||||||||    
T  17434471 taaaacctactgaaaatgacttaaaaacatgctaaaaataacgtaagatgacctgtcat 17434529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 17711307 - 17711401
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||| ||||||||| ||| |||||||   ||||||||| ||||||||||| |||||||||| || ||||| ||||  |||||||||||    
T  17711307 ataggcaatcgttctaatactcctcatttttgcagctaaaacctactgaaaatgactaaaaaacatgctaagaataatgtaatttgacctgtcat 17711401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 8968142 - 8968073
Alignment:
Q  27 ctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||  ||||||||| | |||||||||||||||||||| || |||||||||||||||| ||||||    
T  8968142 ctttttgctgctaaaacctacttaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcat 8968073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 9536837 - 9536757
Alignment:
Q  16 taatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||| ||||||||||||  ||||||||| ||||||| | |||||||||||| || |||||| ||||| ||||||||||    
T  9536837 taatactcctcctttttgctgctaaaacctactgaaaataattgaaaaacatgctaagaataacataagaggacctgtcat 9536757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9849804 - 9849704
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcattacc 100  Q
    |||||||||| | ||||||||| ||   ||||| |  ||||||||| | |||||||||||||||||| | || ||||||||||||||||||||||| |||    
T  9849804 cataggcaattgatctaatactcctttgttttgttggtaaaacctactaaaaatgactgaaaaacatactaagaataacgtaagatgacctgtcatcacc 9849705  T
Q  101 a 101  Q
    |    
T  9849704 a 9849704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 12616714 - 12616809
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||| | |||||||||  |||||||||||  ||||||||| |||||| ||||||||||||||  || ||| |||||||||||| ||||||    
T  12616714 cataggaaattgttctaatactcatcctttttgctgctaaaacctactgaaaaagactgaaaaacatgttaagaattacgtaagatgacatgtcat 12616809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 9263434 - 9263352
Alignment:
Q  14 tctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| |||  || |||| |||||||||||||||  |||||||||||||||| || ||||||||||||| |||| ||||    
T  9263434 tctaatactcctcagttctgctgataaaacctattgaatttgactgaaaaacatgctaaaaataacgtaagataacctatcat 9263352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 10106310 - 10106381
Alignment:
Q  16 taatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatg 87  Q
    ||||||| |||||||||||   ||||||||| |||||||||| ||||||||||| || ||||| ||||||||    
T  10106310 taatactcctcctttttgcagctaaaacctactgaaaatgacagaaaaacatgctaagaataatgtaagatg 10106381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 13588745 - 13588795
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    ||||| ||| ||||||||| |||||||||||| ||||||||||||||||||    
T  13588745 taaaatctactgaaaatgattgaaaaacatgctaataataacgtaagatga 13588795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 14573450 - 14573535
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||| |||| ||||||||||| |||  |||||||| ||||||||| | ||||||||| ||||| |||| || |||||||||||||||    
T  14573450 atagacaattgctctaatactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataacgtaagatga 14573535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 11782498 - 11782587
Alignment:
Q  7 caatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| |||||||||  | |||||||||   |||||||| | ||||||||| |||||||||  || |||||||||||||||||| ||||    
T  11782498 caatcgttctaatactcttactttttgctgtaaaaacctacttaaaatgactaaaaaacatgttaagaataacgtaagatgacctatcat 11782587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 12246624 - 12246567
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||||||||||  ||||||||||  || |||||| ||||||||||||||||    
T  12246624 aaaacctattgaaaatgagcgaaaaacatgttaaaaataacataagatgacctgtcat 12246567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 11252171 - 11252131
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  11252171 actgaaaaacatgctaaaaataacgtaagatgacctgtcat 11252131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 12836118 - 12836070
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    |||||||||||||||||||| || |||||||||||||||  ||||||||    
T  12836118 aaaatgactgaaaaacatgctaagaataacgtaagatgaaatgtcatta 12836070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 15047803 - 15047854
Alignment:
Q  37 ataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||||||| ||||| |||||||||||||||| || |||||||||| ||||    
T  15047803 ataaaacctactgaaattgactgaaaaacatgccaagaataacgtaaaatga 15047854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 15106621 - 15106570
Alignment:
Q  37 ataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||||||| ||||| |||||||||||||||| || |||||||||| ||||    
T  15106621 ataaaacctactgaaattgactgaaaaacatgccaagaataacgtaaaatga 15106570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 16928937 - 16928992
Alignment:
Q  14 tctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgc 69  Q
    ||||||||| ||| |||||||   ||||||||| ||||||||||||||||||||||    
T  16928937 tctaatactcctcatttttgccgctaaaacctactgaaaatgactgaaaaacatgc 16928992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 19603948 - 19603901
Alignment:
Q  7 caatcgctctaatacttctcctttttgctaataaaacctattgaaaat 54  Q
    |||| ||||||||||| ||||||||||||| ||||||||| |||||||    
T  19603948 caattgctctaatactcctcctttttgctactaaaacctactgaaaat 19603901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 8140460 - 8140506
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| ||| |||||||||| ||||||||||| ||||||||||||||    
T  8140460 aaaataactaaaaaacatgctaataataacgtgagatgacctgtcat 8140506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 8928361 - 8928315
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||||    
T  8928361 aaaatgactgaaaaatatgctaaaaataacgtaagatgacatgtcat 8928315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 9054042 - 9054100
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| |||||||||||| ||||||||| || | ||||||||||| | |||||||    
T  9054042 taaaacctactgaaaatgactgcaaaacatgctaagattaacgtaagatcaactgtcat 9054100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 17277899 - 17277940
Alignment:
Q  55 gactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||||||| || |||||||||||||||| ||||||    
T  17277899 gactgaaaaacatgctaagaataacgtaagatgacatgtcat 17277940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 20828208 - 20828152
Alignment:
Q  29 ttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaaga 85  Q
    |||||||  ||| |||||||||||| |||||||||| |||| || ||||||||||||    
T  20828208 ttttgctgctaatacctattgaaaaagactgaaaaagatgctaagaataacgtaaga 20828152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 192122 - 192217
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||| ||||||||||||| ||| || | |||||||  |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  192122 cataagcaatcgctctaacactccttcattttgctgctaaaacctattgaaaatgactgaaaaccatgctaaaaataacgtaagatgacctgtcat 192217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 11804698 - 11804793
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||||| |||||||||||||||||||||  |  ||||||||||||||| |||||||    
T  11804698 cataggcaatcgttctaatactgctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgttatgaataacgtaagatgatctgtcat 11804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 26249159 - 26249077
Alignment:
Q  14 tctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||  |||||||||||  ||||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||    
T  26249159 tctaatactcatcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctatgaataacgtaagatgacctgtcat 26249077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 4450674 - 4450766
Alignment:
Q  4 aggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||| |||| ||||| |  ||||||||| |||||||||||| ||||||||| || ||||||||||||||| |||||||    
T  4450674 aggcaatcgttctaatactcctccattttgttgctaaaacctactgaaaatgactggaaaacatgctaagaataacgtaagatgatctgtcat 4450766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18986841 - 18986754
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||||| ||| ||||||||| ||||||||||||  ||||| ||| ||||| |||||||||||||||| || |||||||||||||||    
T  18986841 cataggcagtcgttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatga 18986754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19001469 - 19001382
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||||| ||| ||||||||| ||||||||||||  ||||| ||| ||||| |||||||||||||||| || |||||||||||||||    
T  19001469 cataggcagtcgttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatga 19001382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23173782 - 23173687
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||| | ||||||||| |||||||||||   ||||||||||| ||||| |||||||||||||| || |||||||||||||||| ||||||    
T  23173782 catagacaattgttctaatactcctcctttttgcagctaaaacctattaaaaataactgaaaaacatgctaagaataacgtaagatgacatgtcat 23173687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10418557 - 10418654
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    |||||||||| ||||||||||| |||  |||||||| ||||||||| ||||||||||| |||||||||  || | ||||| ||||||| |||||||||    
T  10418557 cataggcaattgctctaatactcctctgttttgctagtaaaacctactgaaaatgactaaaaaacatgttaagagtaacggaagatgaactgtcatta 10418654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5236963 - 5236875
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    |||||| ||| | |||||| || ||||||||||||  ||||||||| ||||||| |||||||||||||| || ||||||||||||||||    
T  5236963 cataggaaattgttctaatcctcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaagatgac 5236875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8977567 - 8977479
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    |||||||| | | ||||||||| ||||||||||||  ||||||||| ||||||||| ||||||| |||| || ||||||||||||||||    
T  8977567 cataggcagttgttctaatactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaagatgac 8977479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3585619 - 3585524
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||  | ||||||| |||| |||||||  ||||||||| ||||||||| |||||||||||| || ||||| |||||||||| ||||||    
T  3585619 cataggcaatcattttaatactcctccattttgctgctaaaacctactgaaaatgattgaaaaacatgctaagaataatgtaagatgacttgtcat 3585524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8052525 - 8052439
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||||||||  ||||||||| ||| ||||||||  ||||||||| |||||||||||| ||||||||| || |||||||||||||||    
T  8052525 cataggcaatcattctaatactcctcatttttgctgctaaaacctactgaaaatgactg-aaaacatgctaagaataacgtaagatga 8052439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9767785 - 9767880
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | ||||||||| |||  |||| ||  ||||||||| |||||||| ||||||||||||| || |||||||| ||||||||||||||    
T  9767785 cataggcaattgatctaatactcctctatttttctggtaaaacctactgaaaatggctgaaaaacatgctaagaataacgtgagatgacctgtcat 9767880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10611713 - 10611800
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||||||||| |||||||||  |||||||||||  ||||||||||| ||||| ||||| |||||||| || ||||||| |||||||    
T  10611713 cataggcaatcgttctaatactcatcctttttgctgctaaaacctatttaaaatcactgagaaacatgctaagaataacgcaagatga 10611800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9078979 - 9078883
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactg-aaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||||| || |||||| ||||||||||||  | ||||||| ||||||| |||| |||||||||| || |||||||||||||||| ||||||    
T  9078979 catagacaatcgttccaatactcctcctttttgctgctgaaacctactgaaaataactgaaaaaacatgctaagaataacgtaagatgacatgtcat 9078883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2565906 - 2566001
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||||| | ||||||| |||||||||  |   |||||||| |||||||||||||||||||||| || |||| ||||||||||| ||||||    
T  2565906 catagacaatcgttataatactcctcctttttcttgccaaaacctactgaaaatgactgaaaaacatgctaagaatatcgtaagatgacttgtcat 2566001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2927874 - 2927969
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||||  ||||||||| ||| ||||||||| |||| |||| | |||   |||||||||||||| || |||||||||||||||||||||||    
T  2927874 cataggtaatctttctaatactcctcatttttgctactaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcat 2927969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3173710 - 3173805
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||  ||||||||| ||||  ||| ||  | ||||||| |||||||||||||||||||||| || ||||||| ||||||| |||||||    
T  3173710 cataggcaatctttctaatactcctcccatttactgctgaaacctaatgaaaatgactgaaaaacatgctaagaataacgcaagatgatctgtcat 3173805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 3692846 - 3692759
Alignment:
Q  12 gctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcattac 99  Q
    ||||| |||||||||  |||||||  |||||||||  |||||||| ||||||| |||| |  ||||||||||||||||||||||||||    
T  3692846 gctctgatacttctcggttttgctggtaaaacctacagaaaatgaatgaaaaatatgctatgaataacgtaagatgacctgtcattac 3692759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13280759 - 13280854
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||  |||||||||  | |||||||||  ||||||||| ||||| | | |||||||||||| || |||||||||||||||| ||||||    
T  13280759 cataggcaatcattctaatactcgttctttttgctgctaaaacctactgaaattaattgaaaaacatgctaagaataacgtaagatgacatgtcat 13280854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 14195759 - 14195842
Alignment:
Q  12 gctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtca 95  Q
    ||||||||||| |||  |||||||  ||||||||| | |||||||||||||||||||| || |||||| |||||| ||||||||    
T  14195759 gctctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacataagatcacctgtca 14195842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19201458 - 19201553
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||| | | ||||||||||  |||| |||| ||||||| || ||||||||||  || |||||| ||||||||||||||||    
T  19201458 cataggcaatcgttctaatagtccacctttttgctgctaaatcctactgaaaataacagaaaaacatgttaagaataacataagatgacctgtcat 19201553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 39270365 - 39270275
Alignment:
Q  5 ggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| ||||||||| ||||||||| ||  |||||| || | |||||||||||||||||||| ||  ||||||||||||||| ||||||    
T  39270365 ggcaatcgttctaatactcctcctttttactgctaaaacttactaaaaatgactgaaaaacatgctaa-gataacgtaagatgacatgtcat 39270275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 10332441 - 10332499
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| || |||||||||||||||||||||| || |||||||||||||||| ||||||    
T  10332441 taaaacatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcat 10332499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 9722478 - 9722528
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    ||||| ||| ||||||||| |||||||||||| ||||||||||||||||||    
T  9722478 taaaatctactgaaaatgattgaaaaacatgctaataataacgtaagatga 9722528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 1254754 - 1254698
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| | |||||||||||||||||||||| || |||||||||||||||| ||||||    
T  1254754 aaaaccaactgaaaatgactgaaaaacatgctaa-aataacgtaagatgacttgtcat 1254698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 19154857 - 19154913
Alignment:
Q  40 aaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||| ||||||   ||||||||||||| || |||||||||||||||||||||||    
T  19154857 aaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgtcat 19154913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 19201392 - 19201324
Alignment:
Q  28 tttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||  |||| |||| | ||||| |||||||||||||| || ||||||||||||||| |||||||    
T  19201392 tttttgctgctaaagcctaataaaaattactgaaaaacatgctaagaataacgtaagatgatctgtcat 19201324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 20754256 - 20754312
Alignment:
Q  40 aaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||| ||||||   ||||||||||||| || |||||||||||||||||||||||    
T  20754256 aaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgtcat 20754312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 21707397 - 21707337
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    ||||||||| | ||||||| ||||||| |||| || |||||||||||||||| ||||||||    
T  21707397 taaaacctactaaaaatgattgaaaaatatgctaagaataacgtaagatgacgtgtcatta 21707337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 1767416 - 1767471
Alignment:
Q  41 aacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| |||  |||||||||| |||| || |||||||||||||||||||||||    
T  1767416 aacctattaaaatagactgaaaaatatgctaagaataacgtaagatgacctgtcat 1767471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 15582792 - 15582753
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  15582792 aaaatgactgaaaaatatgcgaaaaataacgtaagatgac 15582753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 144976 - 145038
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaa 63  Q
    |||||||||| |||||||||||  ||| |||||||  ||||||||| | ||||||||||||||    
T  144976 cataggcaattgctctaatactcatccgttttgctggtaaaacctactaaaaatgactgaaaa 145038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 1810953 - 1810999
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||||||||| |  |||||||||||||||| ||||||    
T  1810953 aaaatgactgaaaaacatgctacgaataacgtaagatgacatgtcat 1810999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 9288947 - 9288997
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    ||||||||| ||||| |||||||||||||||| || ||||| |||||||||    
T  9288947 taaaacctactgaaattgactgaaaaacatgccaagaataatgtaagatga 9288997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 9298739 - 9298789
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    ||||||||| ||||| |||||||||||||||| || ||||| |||||||||    
T  9298739 taaaacctactgaaattgactgaaaaacatgccaagaataatgtaagatga 9298789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 17887778 - 17887732
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||    
T  17887778 aaaatgactgaaaaatatgctaagaataacgtaggatgacctgtcat 17887732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 3736373 - 3736426
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacct 91  Q
    ||||||||| |||||  |||| |||||||||| || ||||||||||||||||||    
T  3736373 taaaacctactgaaatagactaaaaaacatgctaagaataacgtaagatgacct 3736426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 1589275 - 1589335
Alignment:
Q  37 ataaaacctattgaaaa-tgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| |||||| || ||||||||||||| || |||| | ||||||||||||||||    
T  1589275 ataaaacctactgaaaaatggctgaaaaacatgctaagaatagcataagatgacctgtcat 1589335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 2505892 - 2505940
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    ||||||||||||||| |||| || |||||||||||||||  ||||||||    
T  2505892 aaaatgactgaaaaatatgctaagaataacgtaagatgaaatgtcatta 2505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 2506862 - 2506822
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||||||  | |||||||||||||||||||||||    
T  2506862 actgaaaaacatgctgagaataacgtaagatgacctgtcat 2506822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 4994786 - 4994822
Alignment:
Q  60 aaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| || |||||||||||||||||||||||    
T  4994786 aaaaacatgctaaaaataacgtaagatgacctgtcat 4994822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 10414329 - 10414281
Alignment:
Q  48 tgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||| || ||||||||||| || ||||| |||||||||||||||||    
T  10414329 tgaaaataaccgaaaaacatgctaagaataatgtaagatgacctgtcat 10414281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 13252749 - 13252713
Alignment:
Q  56 actgaaaaacatgcgaataataacgtaagatgacctg 92  Q
    |||||||||||||| || |||||||||||||||||||    
T  13252749 actgaaaaacatgctaagaataacgtaagatgacctg 13252713  T

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Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24469798 - 24469893
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||||||||||||   |||||||| ||||||||| |||||||||| | || |||||||||||||||||||||||    
T  24469798 cataggcaatcgttctaatactcctcctttttgctgtcaaaacctactgaaaatgattgaaaaacatactaaaaataacgtaagatgacctgtcat 24469893  T

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Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14641632 - 14641727
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||| | ||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||||| || ||||||||||||| |||||||||    
T  14641632 cataggtaattgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaagataacctgtcat 14641727  T

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Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17822121 - 17822027
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgact-gaaaaacatgcgaataataacgtaagatgacctgtc 94  Q
    |||||||||||| ||||||||| ||||||||||||  |||| |||||||||||| ||| ||||||||||| || |||||||||||||||| ||||    
T  17822121 cataggcaatcgttctaatactcctcctttttgctgctaaatcctattgaaaataactagaaaaacatgctaagaataacgtaagatgacatgtc 17822027  T

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Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9848163 - 9848258
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||| |||||||||||  |||||||||||||||||||||| | |||||||||||||||||||  || |||||||| | ||||| ||||||    
T  9848163 cataggaaattgctctaatactcatcctttttgctaataaaacctactaaaaatgactgaaaaacatgttaagaataacgtcaaatgacatgtcat 9848258  T

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Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 22564643 - 22564556
Alignment:
Q  4 aggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacct 91  Q
    ||||||| ||||||||||| |||  |||||||  ||||||||| | |||||||||||||||||||| || ||||||||||||||||||    
T  22564643 aggcaattgctctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacct 22564556  T

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Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 17384025 - 17384118
Alignment:
Q  3 taggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||  | ||||||| ||||||||||||  ||||||||| ||||||| |||||||||||||| || ||||| ||||||||| |||||||    
T  17384025 taggcaatcattgtaatactcctcctttttgctgctaaaacctaatgaaaataactgaaaaacatgctaagaataatgtaagatgatctgtcat 17384118  T

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Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9519732 - 9519819
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||||||| ||||||||||| ||||||||||||  ||||  ||| ||||||| ||| |||||||||| || |||||||||||||||    
T  9519732 cataggcaattgctctaatactcctcctttttgctgctaaatactactgaaaataactaaaaaacatgctaaaaataacgtaagatga 9519819  T

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Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14076396 - 14076491
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||  |||||||||| ||||| ||||||  |||| | || ||||||| |||||||| ||||| || |||||||||||||||||||||||    
T  14076396 cataggcaatttctctaatactcctcctctttgctgctaaatcatactgaaaataactgaaaaccatgctaagaataacgtaagatgacctgtcat 14076491  T

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Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14723684 - 14723771
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    ||||| |||||  ||||||||| ||||||||||||  |||| |||||||||||| |||||||| ||||| || |||||||||||||||    
T  14723684 catagacaatcattctaatactcctcctttttgctcctaaatcctattgaaaataactgaaaagcatgctaagaataacgtaagatga 14723771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 14727170 - 14727229
Alignment:
Q  37 ataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||    
T  14727170 ataaaacctactaaaaatgactgaaaaacatggtaataataacgtaagatgacctgtcat 14727229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24480024 - 24480119
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||||| || |||||| ||||||||||||   |||||||| ||||||||| ||||| |||||| || |||||||||||||||||| ||||    
T  24480024 catagacaatcgttccaatactcctcctttttgctgccaaaacctactgaaaatgattgaaatacatgctaagaataacgtaagatgacctatcat 24480119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 1636635 - 1636728
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| | ||||||||| |||||||||||   ||||||||| | ||||| |||||||||||||| || ||||||||||||||| |||||||    
T  1636635 ataggcaattgttctaatact-ctcctttttgccgctaaaacctactaaaaataactgaaaaacatgctaagaataacgtaagatgatctgtcat 1636728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 26820897 - 26820958
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcattac 99  Q
    ||||||||| ||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  26820897 taaaacctaatgaaaataactgaaaaacatgctaagagtaacgtaagatgacctgtcattac 26820958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19577634 - 19577566
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgc 69  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||||| ||||||| ||| ||||||||||    
T  19577634 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaataactaaaaaacatgc 19577566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 4340664 - 4340759
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||| ||| ||||||| ||||||||| ||  ||||||||| |||||||  ||||||||||| | || ||||||||||||||| |||||||    
T  4340664 cataggaaattgctttaatactcctcctttttactgctaaaacctactgaaaatatctgaaaaacatactaaaaataacgtaagatgatctgtcat 4340759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21760504 - 21760409
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||||  ||||||| | ||||||||||||  ||||  ||||||||||||||||||||| |||| || |||||| |||| |||||||||||    
T  21760504 cataggaaatcattctaataatcctcctttttgctgctaaattctattgaaaatgactgaaaaatatgctaagaataacttaaggtgacctgtcat 21760409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22404351 - 22404256
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||||| | ||||||| ||||||||||||  ||||||||| ||||| | |||||||||||||  || ||||||| |||||||| ||||||    
T  22404351 catagacaatcgttttaatactcctcctttttgctgctaaaacctactgaaatttactgaaaaacatgataagaataacgaaagatgacatgtcat 22404256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 9841030 - 9841116
Alignment:
Q  12 gctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    ||||||||||| ||||||| ||||  ||||||||| ||||||||||| ||| |||||  || |||||||||||||||  ||||||||    
T  9841030 gctctaatactcctcctttctgctggtaaaacctactgaaaatgactaaaacacatgttaagaataacgtaagatgatttgtcatta 9841116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 22845947 - 22845853
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| | ||||||||| |||||||||| |  |||||| || ||||||| |||||||||||||| || | ||||||||||||  |||||||    
T  22845947 ataggcaattgttctaatactcctcctttttgttgttaaaacatactgaaaataactgaaaaacatgctaagagtaacgtaagatggtctgtcat 22845853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14078037 - 14078133
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattg-aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| ||||||||||| ||||| ||||||  |||| |||| || ||||| ||| |||| ||||| || ||||| |||||||||||||||||    
T  14078037 cataggcaattgctctaatactcctcctctttgctgctaaatcctactgaaaaataactaaaaaccatgctaagaataatgtaagatgacctgtcat 14078133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 8038135 - 8038052
Alignment:
Q  13 ctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| |||||| |||||  || ||| || |||||| || ||||||||| || || |||||||||||||||||||||||    
T  8038135 ctctaatactcctccttattgctggtataacttagtgaaaaagattgaaaaacaggctaagaataacgtaagatgacctgtcat 8038052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 21687198 - 21687131
Alignment:
Q  29 ttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||  ||||||||| | ||| |||||||||||||||| || |||||||||||||||| ||||||    
T  21687198 ttttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacatgtcat 21687131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 2588333 - 2588393
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    ||||||| ||||||||||||||||||| |||| || || ||||||||||||| ||| ||||    
T  2588333 taaaaccaattgaaaatgactgaaaaatatgctaaaaacaacgtaagatgacttgttatta 2588393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21060501 - 21060433
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgc 69  Q
    |||| ||||| | ||||||||| |||  ||||| |  ||||||||||||||||||||||||||||||||    
T  21060501 catatgcaattgatctaatactcctctattttggttttaaaacctattgaaaatgactgaaaaacatgc 21060433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 9339034 - 9338987
Alignment:
Q  42 acctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    |||||||||||||||||||||||||||  || ||| ||||||||||||    
T  9339034 acctattgaaaatgactgaaaaacatgttaagaatgacgtaagatgac 9338987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 21845826 - 21845735
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactga-aaaacatgcgaataataacgtaagatgacct 91  Q
    |||||||||||| | ||||| | ||||| ||| ||  ||||| || |||||||||||||| ||||||||  || ||||||||||||||||||    
T  21845826 cataggcaatcgttataataatcctcctcttttcttctaaaaacttttgaaaatgactgaaaaaacatgttaagaataacgtaagatgacct 21845735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23644414 - 23644319
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | ||||||||| ||   |||||||  ||||||||| | ||||  | |||||||||||| || ||||||||||||| |||||||||    
T  23644414 cataggcaattgatctaatactcctatgttttgctggtaaaacctactaaaaacaattgaaaaacatgctaagaataacgtaagataacctgtcat 23644319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 13216364 - 13216314
Alignment:
Q  39 aaaacctattgaaaatgactga-aaaacatgcgaataataacgtaagatga 88  Q
    |||||||||| ||||||||||| ||||||||| || |||||||||||||||    
T  13216364 aaaacctattaaaaatgactgaaaaaacatgctaagaataacgtaagatga 13216314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 27961252 - 27961302
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    |||||||| ||||||||| |||||||||||  || ||||||||||||||||    
T  27961252 aaaacctactgaaaatgattgaaaaacatgttaagaataacgtaagatgac 27961302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 30356300 - 30356358
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||||| |||||||||  || ||||||| || ||||||||||||    
T  30356300 taaaacctaatgaaaatgactaaaaaacatgttaagaataacgcaaaatgacctgtcat 30356358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 32760007 - 32760060
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtca 95  Q
    |||||||| ||||||||||||||||||||||   ||| ||||||||||||| |||||    
T  32760007 aaaacctactgaaaatgactgaaaaacatgc---taaaaacgtaagatgacatgtca 32760060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19594073 - 19593977
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgact-gaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | ||||||||| |||||||||||   ||||||||| ||||||| |||  |||||||||| || | |||| ||||| ||| ||||||    
T  19594073 cataggcaattgttctaatactcctcctttttgcagctaaaacctactgaaaataactaaaaaaacatgctaagattaacataagacgacttgtcat 19593977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 20004277 - 20004181
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaa-catgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||||  |||| ||| ||| ||||||||| |||| |||| | |||   ||||||||| ||||| || |||||||||||||||||| ||||    
T  20004277 cataggcaatcgtgctaacactcctcttttttgctactaaatcctactaaaataaactgaaaaatcatgctaacaataacgtaagatgacctatcat 20004181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 21932486 - 21932562
Alignment:
Q  13 ctctaatacttctcctttttgctaataaaaccta-ttgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||||||| ||||||||||||| ||||||| |  ||||||||  | |||||||||| || |||||| ||||||||    
T  21932486 ctctaatactcctcctttttgctattaaaacccacatgaaaatgtttaaaaaacatgctaagaataacttaagatga 21932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 4824 - 4919
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||||| |||||||||||||||||||||| |  |||||| ||||| ||||| ||||    
T  4824 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataacataagacgacctatcat 4919  T

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Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 18758301 - 18758386
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagat 86  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||| | | |||||||||| || |||||||||||||    
T  18758301 cataggcaatcgttctaatactcctcctttttgctactaaaacctactgaaaataattaaaaaacatgctaaaaataacgtaagat 18758386  T

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Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 23010127 - 23010052
Alignment:
Q  14 tctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    ||||||||| || | |||||||  |||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  23010127 tctaatactccttcgttttgctggtaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaagatgac 23010052  T

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Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35680197 - 35680102
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||| ||||||||||| |||  |||||||  ||||||||| ||||||||||| |||||||||| || |||||||||||||| ||||||||    
T  35680197 catagacaattgctctaatactcctctgttttgctggtaaaacctactgaaaatgacttaaaaacatgctaagaataacgtaagatggcctgtcat 35680102  T

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Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 22569054 - 22569151
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    |||||| ||||| ||||||||||||| ||||| ||  ||||||||| ||||| |||||||||||||||  || |||||| ||||||||||| ||||||    
T  22569054 cataggtaatcgttctaatacttctcattttttctgctaaaacctactgaaattgactgaaaaacatggtaagaataacataagatgacctttcatta 22569151  T

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Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 17891743 - 17891826
Alignment:
Q  13 ctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| |||  |||||||  ||||||||| |||||||||||||||||||||  || |||||||||||||||| ||||||    
T  17891743 ctctaatactcctctgttttgctggtaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcat 17891826  T

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Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 25886288 - 25886193
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||||| |||||||||  ||||||||  |  ||||||||| |||||||||| ||||||||||  || |||||||||||||||||||||||    
T  25886288 catagacaatcgttctaatactcttccttttttatgctaaaacctaatgaaaatgacagaaaaacatgataaaaataacgtaagatgacctgtcat 25886193  T

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Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27907619 - 27907524
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | | |||||||||||||||||| |  |||||| || |||||||||||||||||||||| || ||||| ||||| |||||| ||||    
T  27907619 cataggcaatagttttaatacttctcctttttgttgctaaaacttactgaaaatgactgaaaaacatgctaagaataatgtaaggtgacctatcat 27907524  T

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Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28918188 - 28918275
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||||||||| | ||||||||| ||||||||||    ||||||||| |||||||||||||||||||||| || |||||||||| ||||    
T  28918188 cataggcaattgttctaatactcctcctttttgtagctaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaaaatga 28918275  T

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Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 21905739 - 21905821
Alignment:
Q  14 tctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||| ||  |||||| ||  ||||||||||||||||||||| || |||||| ||||||||||||||||    
T  21905739 tctaatactcctcctttttcctgctaaaacatacagaaaatgactgaaaaacatgctaagaataacataagatgacctgtcat 21905821  T

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Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 16157143 - 16157086
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| |||||||||||||||||||||| || ||||| |||||||||||||||||    
T  16157143 aaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcat 16157086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 24086403 - 24086310
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtc 94  Q
    |||||||||||| ||||||||| ||||||||||||  |||| |||| | |||   |||||||||||||| || ||||||||||| |||||||||    
T  24086403 cataggcaatcgttctaatactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagttgacctgtc 24086310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34574513 - 34574606
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaa-catgcgaataataacgtaagatgacctgt 93  Q
    |||||||| ||| ||||||||| ||||| ||| ||| ||||||||| ||||||| ||| ||||| ||||| || ||||||||||||||||||||    
T  34574513 cataggcattcgttctaatactcctcctattttctattaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacctgt 34574606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29144634 - 29144730
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaa-taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||| ||||  ||||||| | ||||||||||||   ||||||||||||  ||||||| |||||||||| || |||||||||||||||||||||||    
T  29144634 cataggaaatcattctaatattcctcctttttgcttgctaaaacctattggtaatgactaaaaaacatgctaagaataacgtaagatgacctgtcat 29144730  T

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Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25537556 - 25537651
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||||||||||| ||||||||| ||  ||   |||| | |||   |||||||||||||| || |||||||||||||||||||||||    
T  25537556 cataggcaatcgctctaatactcctcctttttactgttatttcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcat 25537651  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17350978 - 17351073
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||| | ||||||||| ||| |||||| |  ||||||||| ||||||| ||||||||| |||  || |||||||||||||||| ||||||    
T  17350978 catagacaattgttctaatactcctcatttttgttgctaaaacctactgaaaataactgaaaaatatgttaagaataacgtaagatgacttgtcat 17351073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 29892228 - 29892285
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||||||| ||||||||| |||  || |||||||||||||||| ||||||    
T  29892228 aaaacctattgaaaataactgaaaaatatgttaagaataacgtaagatgacatgtcat 29892285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 16257872 - 16257952
Alignment:
Q  13 ctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgt 93  Q
    ||||||||||||||  |||||||  ||||| ||| | |||| ||||||||||||||  || |||||| |||||||||||||    
T  16257872 ctctaatacttctcggttttgctggtaaaatctactaaaaacgactgaaaaacatgttaagaataacataagatgacctgt 16257952  T

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Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28930274 - 28930370
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactg-aaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | ||||||| | ||| |||||||   |||||| || |||||||||||| |||||||||| ||  |||||||||||| |||||||||    
T  28930274 cataggcaattgttctaatattcctcatttttgcagctaaaacatactgaaaatgactgaaaaaacatgctaaacataacgtaagattacctgtcat 28930370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18120642 - 18120547
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| |||| |||||||  ||   |||| | |||   |||||||||||||| || |||||||||||||||| ||||||    
T  18120642 cataggcaatcgttctaatactcctccattttgctgctatttcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacatgtcat 18120547  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25196611 - 25196706
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| | ||||||||||| ||||||||  |||| |||| | |||   |||||||||||||  || |||||| ||||||||| ||||||    
T  25196611 cataggcaatcgttttaatacttctcttttttgctgctaaatcctactaaaataaactgaaaaacatgttaagaataacataagatgacatgtcat 25196706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 32130747 - 32130701
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||| |||||| | || |||||||||||||||||||||||    
T  32130747 aaaatgactgataaacatactaagaataacgtaagatgacctgtcat 32130701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 32137972 - 32137914
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| | ||||||||||| ||||||   || |||||||||||||||||||||||    
T  32137972 taaaacctactaaaaatgactgataaacataataagaataacgtaagatgacctgtcat 32137914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 32139382 - 32139336
Alignment:
Q  50 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||||| |||||| | || |||||||||||||||||||||||    
T  32139382 aaaatgactgataaacatactaagaataacgtaagatgacctgtcat 32139336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 25882629 - 25882581
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatg 87  Q
    |||||||| | ||| |||||||||||||||| || ||||||||||||||    
T  25882629 aaaacctactaaaattgactgaaaaacatgctaaaaataacgtaagatg 25882581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 28766909 - 28766949
Alignment:
Q  58 tgaaaaacatgcgaataataacgtaagatgacctgtcatta 98  Q
    |||||||||||  || |||||||||||||||||||||||||    
T  28766909 tgaaaaacatgttaagaataacgtaagatgacctgtcatta 28766949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 10190 - 10098
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgt 93  Q
    ||||| |||| | ||||||||| |||  |||||||| ||||||||| |||||||||||||||| ||||| ||||||| |||||||||| ||||    
T  10190 catagacaattgatctaatactcctctgttttgctagtaaaacctactgaaaatgactgaaaagcatgctaataatagcgtaagatgatctgt 10098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5730 - 5825
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||| |||| | ||||||||| ||||||||||||  |||| |||| | ||||| |||||||||||||  || ||||||| |||||||||| ||||    
T  5730 catagacaattgttctaatactcctcctttttgcttctaaatcctactaaaaataactgaaaaacatgttaaaaataacgaaagatgacctttcat 5825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 36199 - 36143
Alignment:
Q  30 tttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagat 86  Q
    |||||| ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  36199 tttgctgataaaacctattgaaaatgactgaaaaacatgataagaataacgtaagat 36143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 6461 - 6548
Alignment:
Q  9 atcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||| ||||||||| ||| |||||| |  |||| |||||||||||| |||||||||||||| || ||||||||||||| || ||||||    
T  6461 atcgttctaatactcctcatttttgttgctaaatcctattgaaaataactgaaaaacatgctaagaataacgtaagataacatgtcat 6548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23036 - 23131
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||||| ||||||||| |||||||||| |  ||| ||||| | ||||| ||||||| |||||| || |||| | ||||||||||||||||    
T  23036 cataggcaatcgttctaatactcctcctttttggtgctaacacctaattaaaataactgaaatacatgctaagaatagcataagatgacctgtcat 23131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 88496 - 88438
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||| |||||||||||| || |||||||||||||||| ||||||    
T  88496 taaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacatgtcat 88438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 92924 - 92830
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| ||||||||| | ||| ||||||||  |||| |||| | ||||| |||||||||||||| || ||||||||||||| || ||||||    
T  92924 ataggcaatggctctaatattcctcttttttgctgctaaaccctactaaaaataactgaaaaacatgctaagaataacgtaagataacttgtcat 92830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 95624 - 95690
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacat 67  Q
    |||||||||||| ||||||||| ||| ||||||||  ||||||| ||||||| ||||||||||||||    
T  95624 cataggcaatcgttctaatactcctcttttttgctgctaaaacccattgaaattgactgaaaaacat 95690  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 35214 - 35263
Alignment:
Q  37 ataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagat 86  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  35214 ataaaacctattgaaaatgactgaaaaacatgctaagaataacataagat 35263  T

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Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 24839 - 24890
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgac 89  Q
    ||||||||||| |||||||||||||||||||| || |||||| |||||||||    
T  24839 taaaacctattcaaaatgactgaaaaacatgctaagaataacataagatgac 24890  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41339 - 41433
Alignment:
Q  1 cataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||||| | ||||||||| |||  |||||||  ||||||||| | ||||| |||||||||||||| || |||||| |||||||| |||||||    
T  41339 cataggcaattgatctaatactcctctgttttgctggtaaaacctactaaaaataactgaaaaacatgctaagaataac-taagatgagctgtcat 41433  T

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Target: scaffold0386 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 4932 - 4874
Alignment:
Q  38 taaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    ||||||||| | ||| |||||||||||||||| || |||||||||||||||| ||||||    
T  4932 taaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacttgtcat 4874  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 243926 - 243841
Alignment:
Q  2 ataggcaatcgctctaatacttctcctttttgctaataaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatga 88  Q
    |||| |||| ||||||||||| |||  |||||||| ||||||||| | ||||||||| ||||| |||| || |||||||||||||||    
T  243926 atagacaattgctctaatactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataacgtaagatga 243841  T

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Target: scaffold0871 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 4004 - 4053
Alignment:
Q  47 ttgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| ||| |||||||||| || |||||||||||| ||||||||||    
T  4004 ttgaaaataacttaaaaacatgctaagaataacgtaagaggacctgtcat 4053  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 38329 - 38386
Alignment:
Q  39 aaaacctattgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 96  Q
    |||||||| ||||||| ||||| |||||||| || |||| |||||| |||||||||||    
T  38329 aaaacctactgaaaataactgacaaacatgctaagaatagcgtaaggtgacctgtcat 38386  T

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