View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1942_low_8 (Length: 449)

Name: NF1942_low_8
Description: NF1942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1942_low_8
NF1942_low_8
[»] scaffold1974 (1 HSPs)
scaffold1974 (172-444)||(436-708)
[»] scaffold1878 (1 HSPs)
scaffold1878 (172-444)||(566-838)
[»] chr2 (58 HSPs)
chr2 (169-444)||(23177706-23177982)
chr2 (169-444)||(23588963-23589239)
chr2 (170-444)||(12852920-12853194)
chr2 (263-444)||(6708787-6708968)
chr2 (236-414)||(14714592-14714770)
chr2 (239-440)||(3528076-3528278)
chr2 (236-414)||(4512206-4512384)
chr2 (236-444)||(41296261-41296470)
chr2 (177-384)||(29424480-29424687)
chr2 (194-383)||(7983564-7983753)
chr2 (170-353)||(7037000-7037183)
chr2 (236-437)||(21010312-21010514)
chr2 (169-346)||(4829498-4829675)
chr2 (172-352)||(14509245-14509425)
chr2 (169-353)||(35799545-35799729)
chr2 (168-319)||(37868973-37869124)
chr2 (170-259)||(6706960-6707049)
chr2 (176-319)||(12959638-12959781)
chr2 (237-346)||(26205114-26205223)
chr2 (168-319)||(10367271-10367422)
chr2 (169-341)||(28109780-28109952)
chr2 (191-282)||(7490165-7490256)
chr2 (168-259)||(10368378-10368469)
chr2 (169-255)||(2581836-2581922)
chr2 (169-353)||(3532227-3532411)
chr2 (191-346)||(42249690-42249843)
chr2 (176-259)||(11386664-11386747)
chr2 (176-259)||(12958456-12958539)
chr2 (176-255)||(15650481-15650560)
chr2 (185-259)||(1624969-1625043)
chr2 (169-259)||(21012073-21012163)
chr2 (169-259)||(23178875-23178965)
chr2 (169-259)||(23590132-23590222)
chr2 (169-255)||(42028955-42029041)
chr2 (180-255)||(2583543-2583618)
chr2 (170-257)||(33836803-33836890)
chr2 (170-224)||(12854132-12854186)
chr2 (169-243)||(37867789-37867863)
chr2 (169-259)||(42246624-42246714)
chr2 (170-259)||(6209058-6209146)
chr2 (186-351)||(15850561-15850725)
chr2 (195-259)||(40174757-40174821)
chr2 (170-257)||(2305574-2305661)
chr2 (168-259)||(35801038-35801129)
chr2 (168-255)||(42027225-42027312)
chr2 (169-283)||(32614418-32614532)
chr2 (170-211)||(4630125-4630166)
chr2 (180-353)||(25570769-25570942)
chr2 (170-262)||(2306651-2306743)
chr2 (374-414)||(14714898-14714938)
chr2 (247-303)||(45047453-45047509)
chr2 (170-217)||(7038367-7038414)
chr2 (168-211)||(41795993-41796036)
chr2 (170-217)||(42368343-42368390)
chr2 (170-211)||(3255919-3255960)
chr2 (170-211)||(3666309-3666350)
chr2 (180-253)||(14510508-14510581)
chr2 (168-204)||(4701535-4701571)
[»] chr3 (72 HSPs)
chr3 (170-444)||(11219464-11219738)
chr3 (170-444)||(32979122-32979396)
chr3 (169-414)||(17349940-17350185)
chr3 (169-414)||(39133050-39133295)
chr3 (176-420)||(53808358-53808602)
chr3 (169-434)||(8371253-8371518)
chr3 (169-444)||(47765472-47765748)
chr3 (236-398)||(7483379-7483541)
chr3 (236-444)||(34902801-34903010)
chr3 (169-314)||(19622038-19622183)
chr3 (176-262)||(26798896-26798982)
chr3 (169-259)||(32980445-32980535)
chr3 (169-346)||(12062290-12062467)
chr3 (168-413)||(25583146-25583389)
chr3 (176-365)||(23559859-23560049)
chr3 (169-232)||(51401371-51401434)
chr3 (169-259)||(8372609-8372699)
chr3 (169-255)||(41387430-41387516)
chr3 (170-259)||(11220651-11220740)
chr3 (170-259)||(29536748-29536837)
chr3 (170-259)||(47855331-47855420)
chr3 (170-255)||(51825618-51825703)
chr3 (179-259)||(43345362-43345442)
chr3 (169-281)||(51400248-51400360)
chr3 (170-254)||(54653964-54654048)
chr3 (170-253)||(47808105-47808188)
chr3 (169-252)||(49122002-49122085)
chr3 (169-255)||(42632739-42632825)
chr3 (169-346)||(21127958-21128135)
chr3 (236-375)||(31638218-31638356)
chr3 (169-253)||(41386163-41386247)
chr3 (169-252)||(19253002-19253085)
chr3 (168-259)||(25585826-25585917)
chr3 (169-284)||(35174350-35174465)
chr3 (168-255)||(42633883-42633970)
chr3 (176-259)||(48252973-48253056)
chr3 (169-259)||(49334330-49334420)
chr3 (169-253)||(10987652-10987736)
chr3 (176-255)||(2124069-2124148)
chr3 (191-346)||(48254795-48254949)
chr3 (317-391)||(7483254-7483328)
chr3 (176-338)||(43346361-43346523)
chr3 (170-259)||(7820424-7820513)
chr3 (170-255)||(47806852-47806936)
chr3 (203-259)||(29537135-29537191)
chr3 (170-262)||(32974213-32974305)
chr3 (170-257)||(32973173-32973260)
chr3 (169-252)||(43101927-43102010)
chr3 (192-255)||(51824182-51824245)
chr3 (170-257)||(52293518-52293605)
chr3 (168-243)||(54752648-54752723)
chr3 (177-259)||(17345352-17345433)
chr3 (169-259)||(47766944-47767033)
chr3 (170-211)||(39288480-39288521)
chr3 (214-259)||(47854565-47854610)
chr3 (170-211)||(48035365-48035406)
chr3 (170-211)||(52705349-52705390)
chr3 (170-211)||(53047931-53047972)
chr3 (176-257)||(53049032-53049113)
chr3 (170-211)||(53342750-53342791)
chr3 (170-211)||(55443591-55443632)
chr3 (176-255)||(43103293-43103372)
chr3 (176-338)||(48867344-48867506)
chr3 (168-355)||(49333015-49333200)
chr3 (170-208)||(55442628-55442666)
chr3 (170-211)||(5416232-5416273)
chr3 (170-211)||(7583504-7583545)
chr3 (170-211)||(19579254-19579295)
chr3 (170-211)||(19579335-19579376)
chr3 (170-211)||(39287504-39287545)
chr3 (194-259)||(48866199-48866264)
chr3 (170-207)||(52292628-52292665)
[»] chr1 (60 HSPs)
chr1 (170-444)||(26055955-26056229)
chr1 (1-130)||(4911287-4911416)
chr1 (236-437)||(50678463-50678663)
chr1 (169-442)||(9633808-9634082)
chr1 (236-419)||(37624403-37624586)
chr1 (238-414)||(51218803-51218980)
chr1 (236-420)||(30551421-30551605)
chr1 (168-442)||(52742785-52743060)
chr1 (236-444)||(23081933-23082142)
chr1 (169-259)||(13641290-13641380)
chr1 (194-412)||(14764287-14764505)
chr1 (236-419)||(27689383-27689570)
chr1 (169-322)||(44977254-44977407)
chr1 (169-334)||(49141414-49141579)
chr1 (169-319)||(21277027-21277177)
chr1 (236-346)||(22766726-22766836)
chr1 (169-255)||(25787161-25787247)
chr1 (176-258)||(36511325-36511407)
chr1 (169-262)||(14071193-14071286)
chr1 (176-341)||(36509851-36510015)
chr1 (186-319)||(51726777-51726910)
chr1 (170-254)||(3979311-3979395)
chr1 (170-257)||(14390292-14390379)
chr1 (168-255)||(47411016-47411103)
chr1 (169-255)||(47136684-47136770)
chr1 (169-262)||(13930665-13930758)
chr1 (176-341)||(19466117-19466281)
chr1 (170-259)||(26054931-26055020)
chr1 (176-284)||(14169659-14169767)
chr1 (176-259)||(49139841-49139924)
chr1 (169-255)||(25786001-25786087)
chr1 (180-320)||(8092642-8092782)
chr1 (168-259)||(9592270-9592361)
chr1 (169-252)||(13929328-13929411)
chr1 (176-255)||(47411445-47411524)
chr1 (168-259)||(47560171-47560262)
chr1 (176-259)||(50679814-50679897)
chr1 (170-259)||(42248298-42248387)
chr1 (168-253)||(52181304-52181389)
chr1 (170-253)||(3978078-3978161)
chr1 (176-259)||(40812604-40812687)
chr1 (170-257)||(48935105-48935192)
chr1 (181-255)||(16218475-16218549)
chr1 (194-262)||(22167837-22167905)
chr1 (170-262)||(35683089-35683181)
chr1 (169-279)||(13642530-13642640)
chr1 (185-255)||(16217489-16217559)
chr1 (176-262)||(40811235-40811321)
chr1 (170-211)||(2236847-2236888)
chr1 (168-217)||(2971731-2971780)
chr1 (176-261)||(14765085-14765170)
chr1 (170-211)||(48934275-48934316)
chr1 (170-257)||(2237973-2238060)
chr1 (170-257)||(25889487-25889574)
chr1 (176-211)||(34532743-34532778)
chr1 (169-208)||(34653468-34653507)
chr1 (287-353)||(14478420-14478486)
chr1 (186-259)||(20953338-20953411)
chr1 (169-222)||(48467294-48467347)
chr1 (176-208)||(1873898-1873930)
[»] scaffold0290 (2 HSPs)
scaffold0290 (172-351)||(9379-9558)
scaffold0290 (169-259)||(8412-8502)
[»] chr5 (57 HSPs)
chr5 (170-437)||(21387671-21387937)
chr5 (176-437)||(18693738-18693999)
chr5 (169-365)||(19525175-19525371)
chr5 (169-268)||(42510147-42510246)
chr5 (194-346)||(2167421-2167572)
chr5 (255-423)||(7426760-7426928)
chr5 (168-259)||(5384339-5384430)
chr5 (169-353)||(40058051-40058235)
chr5 (170-292)||(7345350-7345472)
chr5 (170-259)||(15613539-15613628)
chr5 (176-319)||(5382982-5383125)
chr5 (169-244)||(18678009-18678084)
chr5 (169-243)||(19827149-19827223)
chr5 (169-365)||(12933784-12933980)
chr5 (169-365)||(32734165-32734360)
chr5 (170-253)||(1663221-1663304)
chr5 (170-257)||(15614955-15615042)
chr5 (176-259)||(15857611-15857694)
chr5 (169-259)||(1273122-1273212)
chr5 (169-259)||(12936095-12936185)
chr5 (173-346)||(223263-223436)
chr5 (170-259)||(42980702-42980791)
chr5 (169-259)||(224583-224673)
chr5 (169-259)||(12950253-12950343)
chr5 (169-259)||(19524016-19524105)
chr5 (170-252)||(42979482-42979564)
chr5 (170-255)||(10085842-10085927)
chr5 (168-365)||(12947944-12948141)
chr5 (205-346)||(22819424-22819564)
chr5 (168-253)||(26403339-26403424)
chr5 (169-242)||(27894033-27894106)
chr5 (176-284)||(12830906-12831014)
chr5 (176-284)||(12862886-12862994)
chr5 (168-259)||(22812380-22812471)
chr5 (133-253)||(8762399-8762520)
chr5 (181-259)||(18695640-18695718)
chr5 (170-284)||(38471323-38471437)
chr5 (170-262)||(4567964-4568056)
chr5 (176-253)||(15509235-15509312)
chr5 (170-259)||(38473548-38473637)
chr5 (169-258)||(42511660-42511749)
chr5 (194-346)||(15856592-15856743)
chr5 (176-259)||(5975796-5975879)
chr5 (176-243)||(22819558-22819625)
chr5 (170-211)||(22650669-22650710)
chr5 (195-259)||(21389136-21389200)
chr5 (169-204)||(6629764-6629799)
chr5 (170-257)||(15510258-15510345)
chr5 (170-257)||(20988724-20988811)
chr5 (194-253)||(24761720-24761779)
chr5 (169-243)||(326377-326451)
chr5 (170-211)||(4566985-4567026)
chr5 (170-211)||(5061062-5061103)
chr5 (170-211)||(5062227-5062268)
chr5 (176-253)||(26404209-26404286)
chr5 (170-211)||(32521963-32522004)
chr5 (176-208)||(32521726-32521758)
[»] scaffold0051 (2 HSPs)
scaffold0051 (170-424)||(39729-39983)
scaffold0051 (168-259)||(22160-22250)
[»] chr8 (71 HSPs)
chr8 (168-440)||(37276038-37276327)
chr8 (176-420)||(36756104-36756349)
chr8 (168-437)||(10052136-10052405)
chr8 (178-414)||(21670106-21670342)
chr8 (169-442)||(7486110-7486383)
chr8 (169-413)||(39546516-39546760)
chr8 (236-407)||(21961923-21962094)
chr8 (236-414)||(13513520-13513698)
chr8 (236-414)||(13603053-13603231)
chr8 (236-420)||(13363410-13363594)
chr8 (246-440)||(45541594-45541783)
chr8 (181-414)||(44103132-44103367)
chr8 (169-346)||(13366956-13367133)
chr8 (169-359)||(117081-117270)
chr8 (169-355)||(44606172-44606358)
chr8 (170-365)||(19913526-19913720)
chr8 (169-319)||(36070211-36070361)
chr8 (205-303)||(36938750-36938848)
chr8 (169-346)||(16363719-16363895)
chr8 (169-346)||(24069352-24069529)
chr8 (169-355)||(35943940-35944127)
chr8 (194-355)||(2421189-2421351)
chr8 (168-285)||(12281747-12281863)
chr8 (170-259)||(37274921-37275010)
chr8 (169-259)||(24068363-24068453)
chr8 (169-259)||(29739636-29739726)
chr8 (169-259)||(36940026-36940116)
chr8 (168-249)||(38591010-38591091)
chr8 (169-257)||(19914901-19914989)
chr8 (169-253)||(31625383-31625467)
chr8 (176-319)||(37324621-37324764)
chr8 (176-346)||(8095386-8095556)
chr8 (237-346)||(21267233-21267342)
chr8 (194-365)||(20308663-20308834)
chr8 (194-365)||(21095296-21095467)
chr8 (252-414)||(39325671-39325834)
chr8 (122-255)||(41867913-41868047)
chr8 (168-262)||(29738323-29738417)
chr8 (169-346)||(39515232-39515409)
chr8 (194-346)||(34617101-34617253)
chr8 (180-261)||(38029-38110)
chr8 (185-346)||(7815995-7816155)
chr8 (205-262)||(8395064-8395121)
chr8 (191-255)||(27750618-27750682)
chr8 (169-253)||(31623939-31624023)
chr8 (168-255)||(1570203-1570290)
chr8 (176-255)||(3237457-3237536)
chr8 (191-346)||(7796714-7796868)
chr8 (169-256)||(36071374-36071461)
chr8 (176-243)||(37472443-37472510)
chr8 (176-243)||(43277930-43277997)
chr8 (169-255)||(43275783-43275869)
chr8 (169-252)||(37474036-37474119)
chr8 (169-240)||(38589853-38589924)
chr8 (168-255)||(41866926-41867013)
chr8 (169-224)||(43386730-43386785)
chr8 (168-346)||(7770804-7770981)
chr8 (176-222)||(14820233-14820279)
chr8 (169-211)||(21267197-21267239)
chr8 (168-230)||(36734566-36734628)
chr8 (194-292)||(41522648-41522746)
chr8 (170-211)||(6844614-6844655)
chr8 (170-259)||(45385787-45385876)
chr8 (176-224)||(6843795-6843843)
chr8 (295-353)||(9854775-9854833)
chr8 (169-211)||(10053785-10053827)
chr8 (186-259)||(34616179-34616257)
chr8 (176-222)||(36757260-36757306)
chr8 (169-223)||(37323381-37323435)
chr8 (176-253)||(4807406-4807483)
chr8 (295-368)||(38696470-38696545)
[»] scaffold0084 (2 HSPs)
scaffold0084 (169-414)||(13042-13287)
scaffold0084 (168-259)||(11738-11829)
[»] chr4 (76 HSPs)
chr4 (169-414)||(43894138-43894383)
chr4 (169-442)||(11094559-11094831)
chr4 (238-414)||(2293362-2293539)
chr4 (185-437)||(44302769-44303011)
chr4 (169-421)||(35787829-35788081)
chr4 (169-423)||(39592119-39592372)
chr4 (169-444)||(47668411-47668680)
chr4 (194-412)||(38418857-38419075)
chr4 (236-437)||(29687791-29687994)
chr4 (169-303)||(86836-86970)
chr4 (169-359)||(6616103-6616294)
chr4 (236-398)||(36604694-36604857)
chr4 (168-346)||(56000319-56000497)
chr4 (168-255)||(33377361-33377448)
chr4 (168-353)||(38370314-38370500)
chr4 (169-333)||(11114899-11115063)
chr4 (180-341)||(34438450-34438610)
chr4 (310-423)||(52980158-52980271)
chr4 (169-260)||(11113775-11113866)
chr4 (168-263)||(30683016-30683111)
chr4 (184-346)||(3533514-3533676)
chr4 (199-365)||(6140247-6140413)
chr4 (169-346)||(48207625-48207800)
chr4 (186-346)||(26393033-26393193)
chr4 (183-346)||(29663689-29663852)
chr4 (176-259)||(46796019-46796102)
chr4 (169-255)||(5688634-5688720)
chr4 (169-259)||(15787495-15787585)
chr4 (186-284)||(17319092-17319190)
chr4 (169-243)||(27408796-27408870)
chr4 (169-255)||(37559031-37559117)
chr4 (170-259)||(15446663-15446752)
chr4 (170-259)||(28103479-28103568)
chr4 (176-333)||(50530543-50530700)
chr4 (177-253)||(5687216-5687292)
chr4 (178-258)||(34439654-34439734)
chr4 (169-252)||(21104310-21104393)
chr4 (168-255)||(44128331-44128418)
chr4 (183-249)||(27410686-27410751)
chr4 (169-259)||(44304972-44305062)
chr4 (169-346)||(38555182-38555359)
chr4 (170-259)||(53400219-53400308)
chr4 (169-253)||(37560298-37560382)
chr4 (176-255)||(1273430-1273509)
chr4 (169-284)||(15786985-15787100)
chr4 (168-259)||(52658943-52659034)
chr4 (168-255)||(55953849-55953936)
chr4 (169-255)||(26788555-26788641)
chr4 (191-281)||(31712477-31712567)
chr4 (169-259)||(33376251-33376341)
chr4 (180-346)||(43419282-43419447)
chr4 (313-373)||(36604586-36604646)
chr4 (176-259)||(40146616-40146699)
chr4 (176-262)||(52660204-52660290)
chr4 (170-259)||(31711126-31711215)
chr4 (169-333)||(44159118-44159281)
chr4 (176-255)||(38417593-38417672)
chr4 (169-243)||(10403312-10403386)
chr4 (168-255)||(44126628-44126717)
chr4 (185-259)||(47667227-47667301)
chr4 (170-211)||(12396915-12396956)
chr4 (169-233)||(40143687-40143751)
chr4 (169-224)||(30682753-30682808)
chr4 (176-259)||(38553969-38554052)
chr4 (169-204)||(39590974-39591009)
chr4 (176-211)||(52880854-52880889)
chr4 (168-211)||(56001309-56001352)
chr4 (169-211)||(96722-96764)
chr4 (185-259)||(307798-307872)
chr4 (170-211)||(526760-526801)
chr4 (170-207)||(937143-937180)
chr4 (170-211)||(2310823-2310864)
chr4 (170-255)||(3217606-3217691)
chr4 (170-211)||(15445470-15445511)
chr4 (214-319)||(28102154-28102259)
chr4 (191-259)||(48206215-48206283)
[»] chr6 (31 HSPs)
chr6 (169-401)||(18139337-18139570)
chr6 (332-441)||(34084045-34084154)
chr6 (169-383)||(33801886-33802100)
chr6 (169-353)||(31738396-31738580)
chr6 (169-259)||(22299896-22299986)
chr6 (169-355)||(293538-293723)
chr6 (169-255)||(8412313-8412399)
chr6 (170-356)||(27440071-27440257)
chr6 (169-259)||(31740265-31740355)
chr6 (176-284)||(9927646-9927753)
chr6 (169-259)||(33807722-33807812)
chr6 (230-346)||(2130877-2130993)
chr6 (169-253)||(8411119-8411203)
chr6 (176-319)||(14328707-14328850)
chr6 (176-319)||(14421717-14421860)
chr6 (170-259)||(27438824-27438913)
chr6 (169-243)||(5311312-5311386)
chr6 (169-238)||(34084148-34084215)
chr6 (245-353)||(13507071-13507178)
chr6 (169-279)||(22298637-22298747)
chr6 (170-211)||(8447255-8447296)
chr6 (170-211)||(8456059-8456100)
chr6 (170-211)||(19367751-19367792)
chr6 (170-211)||(28225458-28225499)
chr6 (295-346)||(7312187-7312237)
chr6 (176-211)||(13173077-13173112)
chr6 (287-353)||(11722940-11723006)
chr6 (176-210)||(26584079-26584113)
chr6 (170-208)||(28226462-28226500)
chr6 (311-356)||(16268716-16268761)
chr6 (170-211)||(19368559-19368600)
[»] scaffold0025 (2 HSPs)
scaffold0025 (170-442)||(56507-56782)
scaffold0025 (191-259)||(54646-54714)
[»] scaffold0098 (1 HSPs)
scaffold0098 (205-412)||(40977-41184)
[»] scaffold0015 (1 HSPs)
scaffold0015 (236-407)||(207643-207814)
[»] chr7 (69 HSPs)
chr7 (168-423)||(14108900-14109153)
chr7 (168-423)||(14418857-14419110)
chr7 (237-414)||(24494887-24495066)
chr7 (169-437)||(38406051-38406319)
chr7 (168-413)||(46458549-46458797)
chr7 (181-423)||(4167496-4167738)
chr7 (169-282)||(4857234-4857347)
chr7 (170-423)||(18801249-18801502)
chr7 (170-423)||(19848663-19848916)
chr7 (169-253)||(40926518-40926602)
chr7 (169-285)||(40930451-40930567)
chr7 (168-251)||(25153690-25153773)
chr7 (169-365)||(25154820-25155019)
chr7 (169-346)||(26406158-26406335)
chr7 (169-354)||(33459441-33459626)
chr7 (169-255)||(19279609-19279695)
chr7 (169-255)||(22061792-22061878)
chr7 (169-255)||(22746317-22746403)
chr7 (169-259)||(24873590-24873680)
chr7 (168-253)||(22744778-22744863)
chr7 (176-284)||(27899182-27899290)
chr7 (168-288)||(43930351-43930471)
chr7 (176-259)||(47163193-47163276)
chr7 (169-259)||(14206706-14206796)
chr7 (169-259)||(14215396-14215486)
chr7 (310-412)||(35315077-35315179)
chr7 (168-346)||(45719647-45719825)
chr7 (169-243)||(46457103-46457177)
chr7 (170-239)||(43935219-43935288)
chr7 (170-259)||(43936133-43936222)
chr7 (176-356)||(131895-132075)
chr7 (170-254)||(19278387-19278471)
chr7 (169-253)||(46674933-46675017)
chr7 (169-259)||(13446651-13446741)
chr7 (169-255)||(43006418-43006504)
chr7 (169-255)||(46673523-46673608)
chr7 (169-224)||(4858372-4858427)
chr7 (176-255)||(22060503-22060582)
chr7 (168-255)||(43007646-43007733)
chr7 (169-259)||(14107865-14107955)
chr7 (169-259)||(14417822-14417912)
chr7 (169-259)||(45721759-45721849)
chr7 (176-333)||(10256163-10256320)
chr7 (176-223)||(17288249-17288296)
chr7 (169-368)||(24872024-24872222)
chr7 (176-259)||(28326383-28326466)
chr7 (176-351)||(35484212-35484386)
chr7 (170-253)||(36702949-36703032)
chr7 (169-239)||(18802402-18802472)
chr7 (170-240)||(36702811-36702881)
chr7 (176-253)||(35127850-35127927)
chr7 (170-211)||(41126273-41126314)
chr7 (176-261)||(41516335-41516420)
chr7 (170-211)||(41616658-41616699)
chr7 (191-259)||(7347213-7347281)
chr7 (169-257)||(33458343-33458430)
chr7 (170-257)||(30223971-30224058)
chr7 (176-211)||(34557437-34557472)
chr7 (201-268)||(35315206-35315273)
chr7 (168-211)||(38408315-38408358)
chr7 (168-259)||(43931859-43931950)
chr7 (176-259)||(48754036-48754119)
chr7 (169-211)||(7146813-7146855)
chr7 (169-255)||(7148055-7148141)
chr7 (300-437)||(22537727-22537860)
chr7 (170-211)||(34558342-34558383)
chr7 (170-211)||(38002555-38002596)
chr7 (170-211)||(41127212-41127253)
chr7 (170-222)||(25532179-25532231)
[»] scaffold0045 (1 HSPs)
scaffold0045 (169-346)||(77085-77264)
[»] scaffold0003 (2 HSPs)
scaffold0003 (170-356)||(47104-47290)
scaffold0003 (170-259)||(48449-48538)
[»] scaffold0013 (2 HSPs)
scaffold0013 (168-243)||(96192-96267)
scaffold0013 (169-211)||(96856-96898)
[»] scaffold2127 (1 HSPs)
scaffold2127 (169-255)||(512-598)
[»] scaffold0178 (2 HSPs)
scaffold0178 (170-284)||(1245-1359)
scaffold0178 (169-259)||(2258-2348)
[»] scaffold0122 (1 HSPs)
scaffold0122 (213-346)||(16022-16155)
[»] scaffold0024 (1 HSPs)
scaffold0024 (169-259)||(72979-73069)
[»] scaffold0046 (2 HSPs)
scaffold0046 (169-224)||(23439-23494)
scaffold0046 (169-259)||(24808-24898)
[»] scaffold0038 (2 HSPs)
scaffold0038 (170-211)||(25956-25997)
scaffold0038 (170-208)||(26960-26998)
[»] scaffold0369 (1 HSPs)
scaffold0369 (168-256)||(12942-13030)
[»] scaffold0177 (1 HSPs)
scaffold0177 (170-257)||(1789-1876)
[»] scaffold0166 (1 HSPs)
scaffold0166 (194-253)||(4217-4276)
[»] scaffold0155 (1 HSPs)
scaffold0155 (176-211)||(5209-5244)


Alignment Details
Target: scaffold1974 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 172 - 444
Target Start/End: Complemental strand, 708 - 436
Alignment:
Q  172 tcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaat 271  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  708 tcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagtttttaacataaaaaat 609  T
Q  272 ctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattat 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  608 ctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgagaaccgttgaattat 509  T
Q  372 gtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatctctc 444  Q
    || | ||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||    
T  508 gtcgggtctattatactttactgtgaatcattaacacctaatacttttatcattttcttcatcttcatctctc 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 172 - 444
Target Start/End: Original strand, 566 - 838
Alignment:
Q  172 tcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaat 271  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  566 tcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagtttttaacataaaaaat 665  T
Q  272 ctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattat 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  666 ctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgagaaccgttgaattat 765  T
Q  372 gtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatctctc 444  Q
    || | ||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||    
T  766 gtcgggtctattatactttactgtgaatcattaacacctaatacttttatcattttcttcatcttcatctctc 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 169 - 444
Target Start/End: Original strand, 23177706 - 23177982
Alignment:
Q  169 ttttcactttggtcccc-taacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    |||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||    
T  23177706 ttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgttagtttttaacataaa 23177805  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaa 367  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23177806 aaatctaagatgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgcggaccgttgaa 23177905  T
Q  368 ttatgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatctctc 444  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  23177906 ttatgtcgggtctattgtactttactgtgaaccactaacacctaattcttttatcattttcttcatcttcatctctc 23177982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 169 - 444
Target Start/End: Original strand, 23588963 - 23589239
Alignment:
Q  169 ttttcactttggtcccc-taacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    |||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||    
T  23588963 ttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgttagtttttaacataaa 23589062  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaa 367  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23589063 aaatctaagatgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgcggaccgttgaa 23589162  T
Q  368 ttatgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatctctc 444  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  23589163 ttatgtcgggtctattgtactttactgtgaaccactaacacctaattcttttatcattttcttcatcttcatctctc 23589239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 170 - 444
Target Start/End: Original strand, 12852920 - 12853194
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||    
T  12852920 tttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtcatctccgttagattttaacatcaaaa 12853019  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaatt 369  Q
    |||||||||||||||||||||||| ||||||||| |||| | |||||||||||  ||||||||||||||||||| ||||||||| ||||||| |||||||    
T  12853020 atctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttttgaattttaaccatttgatttattctttaaaagaggaccattgaatt 12853119  T
Q  370 atgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatctctc 444  Q
    |||||||||||||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  12853120 atgtagagtctattgtactttcctgtcaaccactaacacctaacacttttctcattttcttcatcttcttctctc 12853194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 263 - 444
Target Start/End: Complemental strand, 6708968 - 6708787
Alignment:
Q  263 atcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccg 362  Q
    ||||||| ||| ||||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  6708968 atcaaaagtctgaggtgaaccatatttaaaggtggttcaccataaaccgtattaaattttctaattttaaccatttgatttattctttaaaaaaggaccg 6708869  T
Q  363 ttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatctctc 444  Q
    ||||||||||||| |||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  6708868 ttgaattatgtagggtctattgcactttcctgtgaaccactaacacctaacacttttctcattttcttcatcttcttctctc 6708787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 236 - 414
Target Start/End: Original strand, 14714592 - 14714770
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||| ||   |||||||| |||| |||||  |||||    
T  14714592 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatacgccttattaatttttttaattgcaacca 14714691  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  14714692 tttgattttttctttaaaagatgaccgttgaatcatgtagagtctattgtattttactgtgaaccactaacacctaata 14714770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 239 - 440
Target Start/End: Complemental strand, 3528278 - 3528076
Alignment:
Q  239 tggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccattt 338  Q
    ||||||||||  ||||||||||| | ||||| ||||||||||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||| ||    
T  3528278 tggtcttctctattagtttttaatagcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccagtt 3528179  T
Q  339 gatttttt-ctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttc 437  Q
    |||||||| ||||||| ||||||| ||||||||||||| || |||| || ||||||||||||   |||||||||||| |||||||| ||||||||| |||    
T  3528178 gattttttcctttaaaagaggaccattgaattatgtagggtgtattgtattttactgtgaacttataacacctaatatttttctcactttcttcattttc 3528079  T
Q  438 atc 440  Q
    |||    
T  3528078 atc 3528076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 236 - 414
Target Start/End: Original strand, 4512206 - 4512384
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||||||||||| |||  |||| |||| ||   |||||||| |||| ||||||| ||||    
T  4512206 ttttggtcctctccattagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaatttttttaattttgacca 4512305  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
    |||||||||||||||||| || ||||||||||| |||| | ||||||| ||||||||||||||||| | ||||||||||    
T  4512306 tttgattttttctttaaaagatgaccgttgaatcatgtggggtctattatactttactgtgaaccattcacacctaata 4512384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 236 - 444
Target Start/End: Complemental strand, 41296470 - 41296261
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| ||||||||||||||||||| ||||  ||||| ||||| |||||| |||| |||| |||| | ||||||| |||||||| |||| ||||||     
T  41296470 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaatcatattaaaaggtggtgcaccatggatcttagtaaattttttaatattaacct 41296371  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatc 434  Q
    |||||||||||||||||| |||||  |||  || ||||||  |||||| || |||| |||||| ||||||||||||||| |||||  | |||||||| ||    
T  41296370 tttgattttttctttaaaagaggattgttcgatcatgtaggatctattgtattttagtgtgaatcactaacacctaatatttttcagatttttcttcctc 41296271  T
Q  435 ttcatctctc 444  Q
    ||| ||||||    
T  41296270 ttcttctctc 41296261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 177 - 384
Target Start/End: Complemental strand, 29424687 - 29424480
Alignment:
Q  177 ttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaag 276  Q
    ||||||||||||| ||||||||| ||||||||||| | | ||| |||| |||||||   |||||||| |||| |||||||  ||||||||||  ||||||    
T  29424687 ttggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccgtttattgttttggtcctctctgttagttactaacatcaaatgtctaag 29424588  T
Q  277 gtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtaga 376  Q
     |||||||| ||||||| |||| || | |||| |||||||||||||  |||||||||| |||||||||| ||||||| |||||  |||| || |||||      
T  29424587 atgaaccatgtttaaaggtggtccatcatagaccttattaaatttttaaattttaaccttttgatttttcctttaaaagaggattgttggatcatgtaag 29424488  T
Q  377 gtctattt 384  Q
    ||||||||    
T  29424487 gtctattt 29424480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 194 - 383
Target Start/End: Complemental strand, 7983753 - 7983564
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaag 293  Q
    |||||| |||||||||||  |||| |||||||||||||||  |||| ||| | | ||| | ||||||||||||||  ||||||||||||||| |||||||    
T  7983753 aagtgtgtcaatttggtcctataagtcttctaccgtttactgttttagtccttttcgtcaatttttaacatcaaatgtctaaggtgaaccatgtttaaag 7983654  T
Q  294 atggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagagtctatt 383  Q
     |||| |||| ||||||||||||||||||  ||||| | || |||||||||||||||||| ||||   |||| || |||||| |||||||    
T  7983653 gtggtccaccatagatcttattaaatttttaaatttcatccttttgattttttctttaaaagaggtttgttggatgatgtagggtctatt 7983564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 170 - 353
Target Start/End: Original strand, 7037000 - 7037183
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||||||| ||||| |||| ||||||||| ||||||||||| ||||| |||||| |||||||||||||||||| | ||||||  |||||||| | |||     
T  7037000 tttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtttatttttaaccttaaat 7037099  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaa 353  Q
    |||||||||||| ||  |||| || || | ||||||| | |||||||||| ||  | |||||||| |||||| |||| ||||||    
T  7037100 atctaaggtgaatcaactttataggtgatccaccgtaaaccttattaaatctttcatttttaaccgtttgatcttttttttaaa 7037183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 236 - 437
Target Start/End: Complemental strand, 21010514 - 21010312
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| |||| ||||||| |||||||||||  ||||| ||||||| ||||||||| ||||  | | || | |||||||||||||  ||||||||||     
T  21010514 ttttggtcctctctgttagttgttaacatcaaatgtctaatgtgaaccgtatttaaaggtggtctatcataaaccttattaaatttttaaattttaaccc 21010415  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatc 434  Q
    ||| |||||||||| ||| ||  |  |||| || | |||| ||||||| || |||| | |||||||||||||||||||| |||||||| |||||||||||    
T  21010414 tttaattttttcttaaaaagataattgttggatcaggtagggtctattgtattttattatgaaccactaacacctaatatttttctcacttttcttcatc 21010315  T
Q  435 ttc 437  Q
    |||    
T  21010314 ttc 21010312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 346
Target Start/End: Original strand, 4829498 - 4829675
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||||||| ||||| |||| ||||| |||||||||||| || |||||||||| |  ||||||| ||||||||| |||| |||||| |||||| | |||    
T  4829498 ttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtttactattttggtcctctctgttagtgtttaaccttaaa 4829597  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
     ||||||||| |||||  |||| || |||| |||| |||| || || ||  ||||||||| |||||||||||||||||    
T  4829598 tatctaaggtaaaccaactttataggtggtccaccatagacctcataaatctttctaattctaaccatttgatttttt 4829675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 172 - 352
Target Start/End: Original strand, 14509245 - 14509425
Alignment:
Q  172 tcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaat 271  Q
    ||||||||||||| |||| ||||||||| | |||| |||| ||||||||||||  ||||||| ||||||||| ||||||||| |||||||| | |||  |    
T  14509245 tcactttggtcccttaactataaagtgttttaattcggtcccataaatcttctgtcgtttactattttggtcctctccgttaatttttaaccttaaatgt 14509344  T
Q  272 ctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaa 352  Q
    ||||||| |||||  |||| || |||| |||| |||| |||||||||  || || |||||||| |||||| |||| |||||    
T  14509345 ctaaggtaaaccaactttataggtggtccaccatagaccttattaaaccttttatttttaaccgtttgatattttttttaa 14509425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 35799545 - 35799729
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| ||| |||||||||| ||||||||||||||||||||| ||||| | |||| |||||||||  ||||||| |||||||||| ||||||| | |||    
T  35799545 ttttcaatttagtcccctaactataaagtgtctcaatttggtctcataacttttcttccgtttacctctttggtcctctccgttagcttttaaccttaaa 35799644  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaa 353  Q
      ||||||||||| ||  |||| |  ||||  ||| ||||  ||||||||| || ||||||||||| |||||| |||| ||||||    
T  35799645 tgtctaaggtgaatcaactttataagtggtctaccatagactttattaaatgttataattttaaccgtttgatcttttttttaaa 35799729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 37869124 - 37868973
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||| ||||||||| |||| ||||||||||||||||| ||| ||||| ||||||  |||||||| ||||||||||||||||| ||||||||| | ||    
T  37869124 attttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtcttctccgtttgtttttaaccttaa 37869025  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaat 319  Q
    |  |||||||||| |||  |||| || |||| |||  |||| ||||||||||    
T  37869024 atgtctaaggtgagccaactttataggtggtccacaatagaccttattaaat 37868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 6706960 - 6707049
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||||||||| ||||||||||||||||||||  |||||||||||| |||||||| |||||||||  ||||||||||||||    
T  6706960 tttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttcttccgtttactattttggtcccctccgttagttttt 6707049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 12959781 - 12959638
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||| |||||||||||||||||||||| |||  ||||||||||| ||||||||| ||||| || |||||||| || |||||| | |||  |||||    
T  12959781 tttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctgccgtttacctttttgatcctctccgtttgtctttaaccttaaatgtctaa 12959682  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaat 319  Q
    |||||||||  |||| || |||| |||  |||| ||||||||||    
T  12959681 ggtgaaccaactttataggtggtccacaatagaccttattaaat 12959638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 237 - 346
Target Start/End: Original strand, 26205114 - 26205223
Alignment:
Q  237 tttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccat 336  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||||||| |||||  |||| |||| ||   |||||||| ||||  ||||||||||||    
T  26205114 tttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccatatgccttattaattttttaaattttaaccat 26205213  T
Q  337 ttgatttttt 346  Q
    ||||||||||    
T  26205214 ttgatttttt 26205223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 10367271 - 10367422
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||| ||||||  | |||| ||||||||||||||||| ||| ||||| |||||| ||||||||| |||| ||| |||||||| ||||||||| | ||    
T  10367271 attttcaatttggtttcttaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttagtcgtctccgtttgtttttaaccttaa 10367370  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaat 319  Q
    |  ||||||||||||||  |||| || |||| |||  |||| ||||||||||    
T  10367371 atgtctaaggtgaaccaactttataggtggtccacaatagaccttattaaat 10367422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 169 - 341
Target Start/End: Complemental strand, 28109952 - 28109780
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| ||||||| | |||| ||||||| ||||||||||||| ||||| | ||||   |||||||||||||||| ||||||||| |||||||| | |||    
T  28109952 ttttcaatttggtctcataacgataaagtatctcaatttggtcccataacttttctgtagtttaccattttggtcctctccgttattttttaaccttaaa 28109853  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgat 341  Q
      ||||||||||||||  |||  || |||| |||| | |||||||| || |  | ||||||||||| ||||||    
T  28109852 tgtctaaggtgaaccaactttgtaggtggtccaccatggatcttataaattcatttaattttaaccctttgat 28109780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 7490256 - 7490165
Alignment:
Q  191 ataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaac 282  Q
    ||||| ||||||||||||||| |||||||||| ||  |||||| ||||||||||| |||||||||||||||| | |||  ||||||||||||    
T  7490256 ataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgttagtttttaaccttaaatgtctaaggtgaac 7490165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 10368469 - 10368378
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||| |||| ||||||||| |||||||||||||||||| || ||||||| |||| ||||||| |||||||||| | |||||| ||||||    
T  10368469 attttcaatttgatcccctaactataaagtgtctcaatttgatcccataaattttcttccgtttatcattttggtcatgtccgtttgttttt 10368378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 2581836 - 2581922
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||   |||||||| || |||||| |||||||||||    
T  2581836 ttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttacgccgtttactatcttggtcctctccgttagt 2581922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 3532227 - 3532411
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| |||| |||  || |||||| ||||||||||||||||| |||| |  | ||||| ||||| ||| |||| |||  |||||||||| |||    
T  3532227 ttttcagtttgatcccttaattattaagtgtgtcaatttggtcacataagtcttttgtcatttactattttagtcatctctgttgatttttaacattaaa 3532326  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaa 353  Q
      | ||||||||||||||||||||| |||| |||| ||    ||| ||||   | | ||||||||||||||||||||||||||||    
T  3532327 tgtttaaggtgaaccatatttaaaggtggtccaccatatgcattactaaaaaattttattttaaccatttgattttttctttaaa 3532411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 346
Target Start/End: Complemental strand, 42249843 - 42249690
Alignment:
Q  191 ataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatattta 290  Q
    ||||||||||||||||| |||  |||| ||||||||||||||| ||| |||||| ||| |||| |||||||| | |||  ||||||||||||||  ||      
T  42249843 ataaagtgtctcaatttagtcctataactcttctaccgtttacaattgtggtctcctctgttattttttaaccttaaatgtctaaggtgaaccaacttat 42249744  T
Q  291 aagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    |||  | |  ||| ||||| |||||||||||| ||||||||||| |||||| ||||    
T  42249743 aag--gatctaccatagattttattaaattttttaattttaaccgtttgatctttt 42249690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 11386664 - 11386747
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||| |||| ||||||||| |||||||| || |||||| ||||||||||||||||||||||| || || ||| ||||||    
T  11386664 tttggtcccttaactataaagtgtttcaatttgatcccataaaccttctaccgtttaccattttggttttatctgtttgttttt 11386747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 12958456 - 12958539
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||| |||| || |||| |||||||||| | |||||| ||||||    
T  12958456 tttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccatttatcattttggtcatttccgtttgttttt 12958539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 15650481 - 15650560
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||||||||||| ||||||||||||||||||||  | |||||||| |  ||||||| ||||||||| |||||||||||    
T  15650481 tttggtcccctaactataaagtgtctcaatttggtatcttaaatcttatgtcgtttactattttggtcatctccgttagt 15650560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 1625043 - 1624969
Alignment:
Q  185 ctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||||||||||||||||  ||||||||| | || ||||| ||||||||||||||||||| |||||    
T  1625043 ctaactataaagtgtctcaatttggtcctataaatcttatgccatttactattttggtcttctccgttaattttt 1624969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 21012163 - 21012073
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||| ||||||||| ||||||||| ||||||||||| |  ||||||||   ||||||| ||||||||| |||||||||||||||    
T  21012163 ttttcattttgatcccctaactataaagtgtttcaatttggtccctcaaatcttccgtcgtttactattttggtcatctccgttagttttt 21012073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 23178965 - 23178875
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||||||||||||| ||||| ||| | || |||||| |||||||||||   ||||||  ||||||||| |||||||||||||||    
T  23178965 ttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttggtcatctccgttagttttt 23178875  T

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Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 23590222 - 23590132
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||||||||||||| ||||| ||| | || |||||| |||||||||||   ||||||  ||||||||| |||||||||||||||    
T  23590222 ttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttggtcatctccgttagttttt 23590132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 42029041 - 42028955
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||  ||||| |||||||||||| |||||||| ||||| ||||||  || |||| |||||||||||||||||||||    
T  42029041 ttttcattttggtcatctaactataaagtgtctcgatttggtcccataattcttctgtcgcttactattttggtcttctccgttagt 42028955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 2583618 - 2583543
Alignment:
Q  180 gtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  || |||||| || |||||| |||| ||||||    
T  2583618 gtcccctaactataaagtgtctcaatttggtctcataaatcttacactgtttactatcttggtcctctctgttagt 2583543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 33836803 - 33836890
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||||||||||||| ||||||||||||||||||||||  ||  ||||||| ||||  |  |||||||| |||||||||||||    
T  33836803 tttcattttggtcccctaactataaagtgtctcaatttggtcatttatgtcttctatcgttacctcttttggtcctctccgttagttt 33836890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 12854186 - 12854132
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttct 224  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  12854186 tttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttct 12854132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 37867789 - 37867863
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    |||||| |||| ||||||||| ||||||||||||||||||||| || |||| ||||  |||||| ||||||||||    
T  37867789 ttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaattttctttcgtttatcattttggtc 37867863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 42246624 - 42246714
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||| ||||||||  ||||||||| |||||||| || ||||| |||| |||||||||| ||||||||| | | |||||||||||    
T  42246624 ttttcattttgatcccctaattataaagtgtttcaatttgatcccataactcttttaccgtttactattttggtccttttcgttagttttt 42246714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 6209146 - 6209058
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||  ||||| ||||||||||| ||||||||| ||||| |||| |  ||||||| ||||||||||||| |||||||||||    
T  6209146 tttcattttggtcatctaactataaagtgtcttaatttggtcccataattctt-tgtcgtttactattttggtcttcttcgttagttttt 6209058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 351
Target Start/End: Complemental strand, 15850725 - 15850561
Alignment:
Q  186 taacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccat 285  Q
    |||| ||||| ||| ||||||||||| ||||| |||||| | |||  | |||||||||  || ||||||||||||||   |||  ||||||||||||||     
T  15850725 taactataaaatgtttcaatttggtctcataactcttctgctgttacctattttggtccacttcgttagtttttaaccctaaatgtctaaggtgaaccaa 15850626  T
Q  286 atttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttcttta 351  Q
      ||| || |||| |||| ||||||||| || ||||| ||||||||||| |||||| |||| ||||    
T  15850625 cattataggtggtccaccatagatcttaatagatttt-taattttaaccctttgatcttttgttta 15850561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 40174821 - 40174757
Alignment:
Q  195 agtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||||| ||||||||||||   |||||| ||||||||| |||||||||||||||    
T  40174821 agtgtttcaatttggtcccataaatcttctgttgtttactattttggtcatctccgttagttttt 40174757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 2305574 - 2305661
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||| ||||||||| ||||||||||||||||||||| | ||  |||||| |||||  |  |||||||| |||||||||||||    
T  2305574 tttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgttagttt 2305661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 35801129 - 35801038
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||| |||  |||| |||| ||||||||| ||||||||||| | ||| |||||| || ||||||| ||||||| ||||||||| |||||    
T  35801129 attttcattttcatcccttaactataaagtgtttcaatttggtcccctaactcttctgccatttaccactttggtcctctccgttaattttt 35801038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 42027225 - 42027312
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||| |||||||| ||||| | ||| ||||||||||||||| ||||||| |||| | |||||| | ||||||| | |||||||||    
T  42027225 attttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctgctgtttactactttggtcctttccgttagt 42027312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 32614418 - 32614532
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||| || | |||| ||||||| ||  ||||| |||| |  ||||||||||||| ||| |||||||| ||||||||| | | |    
T  32614418 ttttcattttggtcccctaactatcacgtgtttcaatttagttccataactcttatgtcgtttaccattttagtcctctccgtttgtttttaaccttata 32614517  T
Q  269 aatctaaggtgaacc 283  Q
      |||||||||||||    
T  32614518 tgtctaaggtgaacc 32614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 4630166 - 4630125
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  4630166 tttcattttggtcccctaactataaagtgtctcaatttggtc 4630125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 353
Target Start/End: Complemental strand, 25570942 - 25570769
Alignment:
Q  180 gtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtg 279  Q
    ||||| |||| || |||||| |||||||| |  ||||| |||||  || ||||| ||||| ||| | |||||||||||||||  | |||  |||||||||    
T  25570942 gtcccttaactattaagtgtttcaatttgattccataagtcttcctccatttactattttagtcctttccgttagtttttaaacttaaatgtctaaggtg 25570843  T
Q  280 aaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaa 353  Q
    |||||  |||| || |||| |||| |||| |||||||||| || || ||||||   |||||| |||| ||||||    
T  25570842 aaccaactttataggtggtccaccatagaccttattaaatattttatttttaaaggtttgatcttttttttaaa 25570769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 2306743 - 2306651
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    ||||| ||||||||||||||  ||||||||||||||||||||   ||  |||||| |||||  |  |||||||| ||||||||||||| ||||    
T  2306743 tttcattttggtcccctaactgtaaagtgtctcaatttggtccattatgtcttctgccgttacctcttttggtcctctccgttagtttgtaac 2306651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 14714898 - 14714938
Alignment:
Q  374 agagtctattttactttactgtgaaccactaacacctaata 414  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  14714898 agagtctattgtattttactgtgaaccactaacacctaata 14714938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 45047453 - 45047509
Alignment:
Q  247 tccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcacc 303  Q
    ||||||| ||||||| ||||||  ||||||||||||||||||||||| |||| ||||    
T  45047453 tccgttaatttttaatatcaaatgtctaaggtgaaccatatttaaaggtggtccacc 45047509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 7038414 - 7038367
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataa 217  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| |||||    
T  7038414 tttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 41796036 - 41795993
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||    
T  41796036 attttcattttgatcccctaactataaagtgtctcaatttggtc 41795993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 42368390 - 42368343
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataa 217  Q
    ||||| |||||||||||||| |||||||||||| |||||||| |||||    
T  42368390 tttcattttggtcccctaactataaagtgtctcgatttggtcccataa 42368343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 3255960 - 3255919
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| ||||||||| |||||||||||    
T  3255960 tttcattttggtcccctaactataaagtgtttcaatttggtc 3255919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 3666350 - 3666309
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| ||||||||| |||| |||||||||||||||||||||    
T  3666350 tttcattttggtcccataactataaagtgtctcaatttggtc 3666309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 14510581 - 14510508
Alignment:
Q  180 gtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    ||||| |||| || ||||||||||||||||||  |||| |||||| |||||||| ||||| ||| ||| |||||    
T  14510581 gtcccttaactattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcatcttcgtta 14510508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 4701571 - 4701535
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaa 204  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  4701571 attttcactttgatcccctaactataaagtgtctcaa 4701535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 170 - 444
Target Start/End: Original strand, 11219464 - 11219738
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||| | |||||| |||||||| ||||||||| |||||||||| ||||||||||||||    
T  11219464 tttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcatctccgttagattttaacatcaaaa 11219563  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaatt 369  Q
     ||||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  11219564 ttctaaggtgaaccatatttaaaggtggttcaccatagatcgtattaaattttttaattttaaccatttgattttttctttaaaagaggaccgttgaatt 11219663  T
Q  370 atgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatctctc 444  Q
    |||||| ||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  11219664 atgtagggtctattgtactttcctgtgaaccactaacacctaacacttttctcattttcttcatcttcttctctc 11219738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 170 - 444
Target Start/End: Original strand, 32979122 - 32979396
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||||||| ||||| |||||||||||||||||| || ||||||| |||| |  ||  |  |||||||| |||||||||||||||||||| ||||    
T  32979122 tttcattttggtcctctaactataaagtgtctcaatttgatcccataaattttctgcaattacctcttttggtcctctccgttagtttttaacattaaaa 32979221  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaatt 369  Q
      ||||||||||| |||||||||| ||||||||| |||| | ||||||||||| |||||||||||||||||||  ||||||||| || ||| ||||||||    
T  32979222 gactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgattgattctttaaaagatgactgttgaatt 32979321  T
Q  370 atgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatctctc 444  Q
    |||||| || |||| ||||||| ||| || |||||||||||||||||||||||| ||||||||||||| ||||||    
T  32979322 atgtagggtatattgtactttattgtaaatcactaacacctaatacttttctcactttcttcatcttcttctctc 32979396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 169 - 414
Target Start/End: Complemental strand, 17350185 - 17349940
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| ||||||||| ||||||||||||||||||||| | ||  |||||| | |||  |  |||||||| ||||||||||||||||||||||||    
T  17350185 ttttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgttacctcttttggtcctctccgttagtttttaacatcaaa 17350086  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      ||||||||||||||||||||||| |||| |||| ||   |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  17350085 tgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaattttttaattttaaccatttgattttttctttaaaagaggaccgttgaat 17349986  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
     |||||| |||||||  |||||| ||||||||||||||||||||||    
T  17349985 catgtagggtctattgaactttattgtgaaccactaacacctaata 17349940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 169 - 414
Target Start/End: Original strand, 39133050 - 39133295
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||| ||||||||||||||||||||| | ||  ||||||  ||||  |  |||||||| |||| |||||||||||||||||||    
T  39133050 ttttcaatttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgttagtttttaacatcaaa 39133149  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      ||||||||||||||||||||||| |||| |||| ||   |||| |||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  39133150 tgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaattttttaattttaaccatttgattttttctttaaaagaggacagttgaat 39133249  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
     |||||  ||||||| ||||||| ||||||||||||||||||||||    
T  39133250 catgtaaggtctattgtactttattgtgaaccactaacacctaata 39133295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 176 - 420
Target Start/End: Original strand, 53808358 - 53808602
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||| |||||| ||||||||||||||| ||||| |||||||||| |  ||||||| ||||||||| ||||| ||||||||||||||||||  |||||    
T  53808358 tttggtctcctaactataaagtgtctcaatctggtcccataaatcttatgtcgtttactattttggtcatctccattagtttttaacatcaaatttctaa 53808457  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtag 375  Q
    |||||| ||||| ||||| |||| |||| || | |||||||||||||  |||||||||| |||||||||||||||||| ||| | ||||| || ||||||    
T  53808458 ggtgaatcatatctaaaggtggtccaccataaaccttattaaatttttaaattttaaccctttgattttttctttaaaagagaatcgttggatcatgtag 53808557  T
Q  376 agtctattttactttactgtgaaccactaacacctaatacttttc 420  Q
      |||||| || ||||||||||||||||||||||||||| |||||    
T  53808558 gatctattgtattttactgtgaaccactaacacctaatatttttc 53808602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 169 - 434
Target Start/End: Original strand, 8371253 - 8371518
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||| ||||| ||||||||||||||  |||||||||||| | |||||| ||||||||| ||||||||||||||||||||||||    
T  8371253 ttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagtttactattttggtcctctccgttagtttttaacatcaaa 8371352  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
     |||||| | ||||| || ||| || |||| |||| | || |||| |||||||| ||||||||||| |||||||||||||||||| |||||  |||| ||    
T  8371353 tatctaaagcgaaccgtacttagaggtggtccaccatggaccttagtaaattttttaattttaaccctttgattttttctttaaaagaggattgttggat 8371452  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatc 434  Q
     || || |||||||| || | || ||| |||||||||||||||||| |||||||| |||||||||||    
T  8371453 catatatagtctattgtattctattgtaaaccactaacacctaata-ttttctcacttttcttcatc 8371518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 169 - 444
Target Start/End: Original strand, 47765472 - 47765748
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||||||||||||| |||| |||||||||||||| ||| || | || ||||||    |||||   |||||||| ||||||||||||||||||||||||    
T  47765472 ttttcactttggtccc-taactataaagtgtctcaaattgatcccttatatcttccgttgtttattgttttggtcatctccgttagtttttaacatcaaa 47765570  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttga-ttttttctttaaatgaggaccgttgaa 367  Q
     |||| |||||||||||  ||||||||||| |||| |||| |||||| ||||||  |||||||||| ||||| ||||||||||||| |||||  |||| |    
T  47765571 tatcttaggtgaaccattgttaaagatggtccaccatagaccttattgaatttttaaattttaaccttttgatttttttctttaaaagaggattgttgga 47765670  T
Q  368 ttatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatcttcatctctc 444  Q
    | |||||| ||||||| || ||||  ||||||||||||||| ||||| | || ||| |||||||||||||| ||||||    
T  47765671 tcatgtagggtctattgtattttagcgtgaaccactaacacttaatattcttttcacttttcttcatcttcttctctc 47765748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 236 - 398
Target Start/End: Complemental strand, 7483541 - 7483379
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||  |||  |||| ||   |||||||| |||| ||||||||||||    
T  7483541 ttttggtcatctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggcccaccatatgccttattaatttttttaattttaacca 7483442  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaa 398  Q
    |||||||||||||||||| |||||||||||||| |||| | ||||||| ||||||||||||||    
T  7483441 tttgattttttctttaaaagaggaccgttgaatcatgtggggtctattatactttactgtgaa 7483379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 236 - 444
Target Start/End: Complemental strand, 34903010 - 34902801
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| ||||||||||||||||||| ||||  ||||| ||||||||||||||||| |||| |||| | || |||| |||||||| |||||||||||     
T  34903010 ttttggtcatctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccatggaccttagtaaattttttaattttaacct 34902911  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatc 434  Q
    |||||||||||| ||||| |||||  |||| || |||||| || |||| |  |||| |||||||||||||||||||||| |||||  | |||||||| ||    
T  34902910 tttgattttttcattaaaagaggattgttggatcatgtagggtttattgttttttagtgtgaaccactaacacctaatatttttcagatttttcttcctc 34902811  T
Q  435 ttcatctctc 444  Q
    ||| ||||||    
T  34902810 ttcttctctc 34902801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 19622038 - 19622183
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| |  |||||   ||||||| |||||||||||||| |||||||||    
T  19622038 ttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttactggtttggtcctctccgttagttttcaacatcaaa 19622137  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttat 314  Q
      | |||||||||| || ||||||| |||| ||||||||| |||||    
T  19622138 tgtttaaggtgaactatgtttaaaggtggtccaccgtagaccttat 19622183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 26798982 - 26798896
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    |||||||||||||| ||||| ||||||||||||||| ||||| |||||  |||||||||||||||||| ||||||||||||||||||    
T  26798982 tttggtcccctaactataaaatgtctcaatttggtcccataattcttcctccgtttaccattttggtcctctccgttagtttttaac 26798896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 32980535 - 32980445
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||| | |||||||||||||||||||  ||||||||||| |||||||| ||||||||| |||||||||||||||    
T  32980535 ttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgttagttttt 32980445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 169 - 346
Target Start/End: Complemental strand, 12062467 - 12062290
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| ||||||||| |||| || |||||||||||||||||| ||| | |||| | | |||||| ||||||||| | ||| |||||||||||| | |||    
T  12062467 ttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgtttactattttggtcatttccattagtttttaaccttaaa 12062368  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
      ||||||||||||||  |||| || || | |||| || | |||||||||| || || ||||||||||||||||||||    
T  12062367 tgtctaaggtgaaccaactttataggtgatccaccatataccttattaaatcttgtatttttaaccatttgatttttt 12062290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 168 - 413
Target Start/End: Original strand, 25583146 - 25583389
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    |||||||||||||||||||||| || ||  |||||||||||||| ||||| |||||| |||||||| ||||||||| |||| |||| |||||||| | ||    
T  25583146 attttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtttactattttggtcctctctgttaatttttaaccttaa 25583245  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaa 367  Q
    |  ||||||| |||| ||| |||||| || | |||| |||  ||||| || |  | ||||||||||  |||||| |||| || ||| ||| ||||||| |    
T  25583246 atgtctaaggcgaactata-ttaaaggtgctccaccataggccttataaattcatttaattttaactttttgatatttttttaaaaagagaaccgttgga 25583344  T
Q  368 ttatgtagagtctattttactttactgtgaaccactaacacctaat 413  Q
    |||| ||| |||| || ||| |||| ||||||||  ||||||||||    
T  25583345 ttatatag-gtctgttgtaccttacggtgaaccatcaacacctaat 25583389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 365
Target Start/End: Original strand, 23559859 - 23560049
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||| |||  || ||||||||||||||| || ||||| ||||||  ||||||| ||||||||| |||||||||||||||||| | ||   |||||    
T  23559859 tttggtcccttaattattaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttagtttttaaccttaattgtctaa 23559958  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgat-tttttctttaaatgaggaccgttg 365  Q
    | |||||||  |||| || |||| |||| ||||||||||||||| || || ||||||   |||||| ||||| ||||||||  ||||||||    
T  23559959 gatgaaccaactttataggtggtccaccatagatcttattaaatcttttatttttaattgtttgatctttttttttaaatggagaccgttg 23560049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 51401434 - 51401371
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgttta 232  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  51401434 ttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgttta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 8372699 - 8372609
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||||||  | || |||||| |||||||||  ||||||||||||||    
T  8372699 ttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatccacaacagtttactattttggtcacctccgttagttttt 8372609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 41387516 - 41387430
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||||||||| ||||| ||||||||||||||| |||||| |||  ||||||||| ||||||||| |||||||||||    
T  41387516 ttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtttactattttggtcctctccgttagt 41387430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 11220740 - 11220651
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||||||||| |||||||||||||||||||||  |||||||||||  ||||||| |||||||||  ||||||| ||||||    
T  11220740 tttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtcccctccgtttgttttt 11220651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 29536748 - 29536837
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||| ||| ||||| ||||||||||||||||||||| ||||||||||||  ||||||| ||||||||| |||||||||| ||||    
T  29536748 tttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttctttcgtttactattttggtcctctccgttagctttt 29536837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 47855420 - 47855331
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||  |||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||| ||||||||| |||||    
T  47855420 tttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcctctccgttatttttt 47855331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 51825703 - 51825618
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||  ||||||| ||||||||| | |||||||||    
T  51825703 tttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgtttactattttggtcatatccgttagt 51825618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 43345362 - 43345442
Alignment:
Q  179 ggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||| ||||| ||| ||||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||    
T  43345362 ggtcccttaactataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctccgttagttttt 43345442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 51400248 - 51400360
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||| | ||||||| ||||||||||||||||| ||| ||||||| |||  |||| ||||||||||||| | |||||| ||||||||||| |||    
T  51400248 ttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttcagccgtataccattttggtcctttccgtttgtttttaacattaaa 51400347  T
Q  269 aatctaaggtgaa 281  Q
      ||| |||||||    
T  51400348 tgtcttaggtgaa 51400360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 54654048 - 54653964
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttag 254  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| ||||| ||||||  ||||||| ||||||||| ||||||||||    
T  54654048 tttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtcgtttactattttggtcctctccgttag 54653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 47808188 - 47808105
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||||||||| || |||| ||||||||||||||||||||| ||||||||||||  ||||| | ||||||||| |||||||||    
T  47808188 tttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttctgtcgtttgctattttggtcctctccgtta 47808105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 49122085 - 49122002
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtt 252  Q
    |||||| ||||||| | |||| ||||||||||||||||||||| ||||| | |||| |||||||||||||||||||| ||||||    
T  49122085 ttttcattttggtctcttaactataaagtgtctcaatttggtctcataagttttctgccgtttaccattttggtcttttccgtt 49122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 42632739 - 42632825
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||||||||| |||||||||||||||||| || |||||||||| |  ||||||| ||||| ||| |||||||||||    
T  42632739 ttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgtttactattttagtcctctccgttagt 42632825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 346
Target Start/End: Original strand, 21127958 - 21128135
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| || | |||| || |||||| ||||||||||| ||||| |||||| |||||||||||||||||| | |||||  |||||||||   |||    
T  21127958 ttttcagtttgatctcttaactattaagtgtgtcaatttggtcccataactcttctgccgtttaccattttggtcatttccgtctgtttttaaccctaaa 21128057  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
      ||||||||| ||||   ||| || |||| |||| |||| ||||  || |||| |||||||||||||||||| ||||    
T  21128058 tgtctaaggtggaccaacattataggtggtccaccatagaccttacaaagttttttaattttaaccatttgatatttt 21128135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 375
Target Start/End: Original strand, 31638218 - 31638356
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaat--ctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaac 333  Q
    ||||| || |||||| ||||||||||||||||| ||  |||||||||||||||||||||| ||||  ||| ||   |||| |||||||| ||||||||      
T  31638218 ttttgatcctctccgctagtttttaacatcaaatatatctaaggtgaaccatatttaaaggtggtctaccatacgccttactaaattttttaatttta-- 31638315  T
Q  334 catttgattttttctttaaatgaggaccgttgaattatgtag 375  Q
      |||||||||||||||||| || ||| ||||||| ||||||    
T  31638316 -ctttgattttttctttaaaagaagacagttgaatcatgtag 31638356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 41386163 - 41386247
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||| |||||||||||||| ||||||||||||||||||||  ||||||||||    ||||||| ||||||||| |||||||||    
T  41386163 ttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacgacgtttactattttggtcctctccgtta 41386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 19253085 - 19253002
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtt 252  Q
    |||||| |||||||||||||  ||||| |||||||||||| || ||||||| |||| |||||||||||||||||| | ||||||    
T  19253085 ttttcaatttggtcccctaattataaaatgtctcaatttgatcccataaatattctgccgtttaccattttggtcctgtccgtt 19253002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 25585917 - 25585826
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||| |||||| ||||| || ||  |||||||||||||| ||||||||||||  ||||||| ||||| ||| |||||||||||||||    
T  25585917 attttcactctggtcctctaactattaaacgtctcaatttggtctcataaatcttctgtcgtttactattttagtcatctccgttagttttt 25585826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 35174465 - 35174350
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| ||||||||| |||| || |||||| ||||  ||||| ||||| ||||||| ||||||| ||||||||| | || |||| |||||||| | |||    
T  35174465 ttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgttaatttttaaccttaaa 35174366  T
Q  269 aatctaaggtgaacca 284  Q
    | ||||||||||||||    
T  35174365 agtctaaggtgaacca 35174350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 42633970 - 42633883
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||| |||||||||| |  ||||||  ||||||||| |||| ||||||    
T  42633970 attttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgtcgtttattattttggtcctctctgttagt 42633883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 48252973 - 48253056
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||  |||||||| | | | ||| |||||||||||||||    
T  48252973 tttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtagtcatctccgttagttttt 48253056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 49334420 - 49334330
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| ||||||||  |||| ||||| ||||||||| |||||  |||||||||||||||||||| |||||| || |||| ||||||||||    
T  49334420 ttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtttactattttgatcatctctgttagttttt 49334330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 10987736 - 10987652
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||||| || | ||||||   ||||||||| |||| ||||    
T  10987736 ttttcattttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccgttttttattttggtcctctctgtta 10987652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 2124069 - 2124148
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| ||||||| ||||| | ||| ||||||||| |||||||||| | |||||||| ||||||||| |||||||||||    
T  2124069 tttggttccctaactataaaatatcttaatttggtcccataaatcttatgccgtttactattttggtcatctccgttagt 2124148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 346
Target Start/End: Complemental strand, 48254949 - 48254795
Alignment:
Q  191 ataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatattta 290  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||| || || |||||    ||||||||| |||  ||||||||| ||||   |||    
T  48254949 ataaagtgtctca-tttggtcacataactcttctgccgtttaccattttagttttttccgtctaattttaacattaaatgtctaaggtggaccaacatta 48254851  T
Q  291 aagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
     || |||| |||| || | |||| ||| |||| |||||||||||| ||||| ||||    
T  48254850 taggtggtccaccataaaccttactaagttttttaattttaaccacttgatatttt 48254795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 7483328 - 7483254
Alignment:
Q  317 aattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagagtctattttacttta 391  Q
    |||||| |||||||| ||||||||||||||  ||||| |||||||||||||| |||| | ||||||| |||||||    
T  7483328 aattttttaattttatccatttgatttttttgttaaaagaggaccgttgaatcatgtggggtctattatacttta 7483254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 338
Target Start/End: Complemental strand, 43346523 - 43346361
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    |||| |||| |||| || |||||| ||||||||||| ||||| ||||||  |||||| |||||||||| | | |||  |||||||||   |||  |||||    
T  43346523 tttgatcccttaactattaagtgtgtcaatttggtctcataactcttctgtcgtttatcattttggtcattttcgtctgtttttaaccctaaatgtctaa 43346424  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccattt 338  Q
    |||| ||||   ||| || |||| |||| |||| |||| |||||||| |||||||||||||||    
T  43346423 ggtggaccaacattataggtggtccaccatagaccttactaaattttttaattttaaccattt 43346361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 7820424 - 7820513
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||| ||||| ||||||||| ||||||||| | ||||||| || |  |||||||  |||||||| |||||||||||||||    
T  7820424 tttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtcgtttactgttttggtcctctccgttagttttt 7820513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 47806852 - 47806936
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||| ||||||||| |||  |||||||||||||||||| ||  ||||||||||| | ||||| |||||||||| |||||||||||    
T  47806852 tttcattttggtcccttaattataaagtgtctcaatttgatcctataaatcttctgctgttta-cattttggtcctctccgttagt 47806936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 29537191 - 29537135
Alignment:
Q  203 aatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||| |||||||||||| |||||||| ||||||||| |||||||||||||||    
T  29537191 aatttcgtcccataaatcttctgccgtttacaattttggtcctctccgttagttttt 29537135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 32974305 - 32974213
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    ||||| |||||||||||||| ||||||||||||||||||||| | ||  |||||| |||||  |  |||||||| |||||||||  |||||||    
T  32974305 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctccgttacattttaac 32974213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 32973173 - 32973260
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||||||||||||| ||||||||||||||||||||| | ||  |||||| |||||  |  |||| ||| |||||||||||||    
T  32973173 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctctttttgtcctctccgttagttt 32973260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 43101927 - 43102010
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtt 252  Q
    |||||| |||||||| ||||  ||||||||||||||||||||| ||||| ||||||  || |||| |||||| || ||||||||    
T  43101927 ttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttctgtcgcttactattttgatcatctccgtt 43102010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 51824182 - 51824245
Alignment:
Q  192 taaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||||||||||||| |  ||||||||||||||| ||||||||||| ||| ||| |||||||    
T  51824182 taaagtgtctcaatttgatttcataaatcttctaccatttaccatttttgtcatctgcgttagt 51824245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 52293605 - 52293518
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||||||||||||| |||||||||||||||||||||   ||  ||||||| ||||  |  |||||||| |||||||||||||    
T  52293605 tttcattttggtcccctaactataaagtgtctcaatttggtcctttatgtcttctatcgttacctcttttggtcctctccgttagttt 52293518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 54752648 - 54752723
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||   || ||||| | |||||||| |||||||||    
T  54752648 attttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgccgtttactattttggtc 54752723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 17345352 - 17345433
Alignment:
Q  177 ttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||||| | ||||| ||||||||||||  | |||||||||| | | ||||| |||||||| |||||||||||||||    
T  17345352 ttggtcccctaactaaaaagtatctcaatttggttccttaaatcttcttctg-ttacctttttggtcctctccgttagttttt 17345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 47767033 - 47766944
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| ||||||||| |||| ||||||||||||||||||||| ||||| |||||  |||||||| | | | ||| ||| |||||||||||    
T  47767033 ttttcattttggtccc-taactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtcgtcctctgcgttagttttt 47766944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 39288521 - 39288480
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  39288521 tttcattttggtcccctaactataaagtgtctcaatttggtc 39288480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 47854565 - 47854610
Alignment:
Q  214 ataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||||    
T  47854565 ataaatcttcttccgtttactattttggtcctctccgttagttttt 47854610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 48035406 - 48035365
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  48035406 tttcattttggtcccctaactataaagtgtctcaatttggtc 48035365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 52705390 - 52705349
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  52705390 tttcattttggtcccctaactataaagtgtctcaatttggtc 52705349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 53047931 - 53047972
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  53047931 tttcattttggtcccctaactataaagtgtctcaatttggtc 53047972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 53049113 - 53049032
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    |||||||||||||| ||||||||||||||||||||| | ||  ||||||  ||||  |  |||||||| |||||||||||||    
T  53049113 tttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttagttt 53049032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 53342750 - 53342791
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  53342750 tttcattttggtcccctaactataaagtgtctcaatttggtc 53342791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 55443632 - 55443591
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  55443632 tttcattttggtcccctaactataaagtgtctcaatttggtc 55443591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 43103372 - 43103293
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||| ||||||||| | ||| | ||||||||||||  ||||||| |||| |||||||| ||||||||| | |||||||||    
T  43103372 tttgatcccctaactacaaaatatctcaatttggtttcataaattttctgccgtttactattttggtcctttccgttagt 43103293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 338
Target Start/End: Complemental strand, 48867506 - 48867344
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatctt-ctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatcta 274  Q
    ||||||||| |||| || |||||| ||||||||||| ||| | |||| |||| |||||| | | ||||| | || ||||||||||||| | |||  ||||    
T  48867506 tttggtcccttaactattaagtgtgtcaatttggtcccattagtctttctac-gtttactaatgtggtcctttctgttagtttttaaccttaaatgtcta 48867408  T
Q  275 aggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccattt 338  Q
    ||||||||||  |||  || ||||  ||| ||||  |||||||| ||| |||||||||||||||    
T  48867407 aggtgaaccaactttgtaggtggtctaccatagactttattaaaatttgtaattttaaccattt 48867344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 355
Target Start/End: Original strand, 49333015 - 49333200
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||| ||||||| | | || ||||||||||| || |||||| ||||| ||| ||   |||||||||| ||| | |||| |||||||||| || | ||    
T  49333015 attttcagtttggtctcatgactataaagtgtcttaacttggtctcataactctactgttgtttaccattctggccatctcggttagtttttcaccttaa 49333114  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatg 355  Q
    |  ||||||||||| ||  ||||  | |||| |||| |||| |||||| ||| || || |||||||| ||||||||||| ||||||||    
T  49333115 acgtctaaggtgaatcaactttatgggtggtccaccatagaccttatt-aatcttttatttttaaccgtttgatttttt-tttaaatg 49333200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 55442628 - 55442666
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttg 208  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  55442628 tttcattttggtcccctaactataaagtgtctcaatttg 55442666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 5416232 - 5416273
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| ||||| |||||||||||||||    
T  5416232 tttcattttggtcccctaactataaaatgtctcaatttggtc 5416273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 7583504 - 7583545
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||| ||||| |||||||||||||||||||||    
T  7583504 tttcattttggtccactaactataaagtgtctcaatttggtc 7583545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 19579254 - 19579295
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| ||||| |||||||||||||||    
T  19579254 tttcattttggtcccctaactataaaatgtctcaatttggtc 19579295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 19579376 - 19579335
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| ||||||||| |||| |||||||||||||||||||||    
T  19579376 tttcattttggtcccttaactataaagtgtctcaatttggtc 19579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 39287504 - 39287545
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||| ||||| |||||||||||||||||||||    
T  39287504 tttcattttggtcctctaactataaagtgtctcaatttggtc 39287545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 48866199 - 48866264
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||  |||| |||||| |||||||| | | ||||| |||||||||||||||    
T  48866199 aagtgtgtcaatttggtcctataagtcttcttccgtttactaatatggtcctctccgttagttttt 48866264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 52292628 - 52292665
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaattt 207  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  52292628 tttcattttggtcccctaactataaagtgtctcaattt 52292665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 5e-94; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 170 - 444
Target Start/End: Complemental strand, 26056229 - 26055955
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||||||||||||| ||||||||||||||||||||| |||||||||| |  ||||||| ||||||||| |||||||||| ||||||||||||||    
T  26056229 tttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctctccgttagattttaacatcaaaa 26056130  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaatt 369  Q
     ||||| ||||||||||||||||| ||||||||| |||  | ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||    
T  26056129 gtctaaagtgaaccatatttaaaggtggttcaccataggccgtattaaattttttaattttaaccatttgatttattctttaaaagaggaccgttgaatt 26056030  T
Q  370 atgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatctctc 444  Q
    |||||| ||||||| |||||| ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  26056029 atgtagggtctattgtactttcctgtgaaccactaacacctaaaacttttatcattttcttcatcttcttctctc 26055955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 4911287 - 4911416
Alignment:
Q  1 cattccgaaaatgaaatcaatcaattaatcatggttgagcggaatacaatgaaggataaggaaagagatggaattaataaacaaacggtctaagtggcat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4911287 cattccgaaaatgaaatcaatcaattaatcatggttgagcggaatacaatgaaggataaggaaggagatggaattaataaacaaacggtctaagtggcat 4911386  T
Q  101 accttccattatggactcatgataaataat 130  Q
    ||||||||||||||||||||||||||||||    
T  4911387 accttccattatggactcatgataaataat 4911416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 236 - 437
Target Start/End: Original strand, 50678463 - 50678663
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| | ||||||||||| ||||||||||||    
T  50678463 ttttggtcctctctgttagtttttaacatcaaaactctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttt-taattttaacca 50678561  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatct 435  Q
    |||||||||||||||||| |||||| |||||||||  ||| ||||||| ||||||||||||||| |||||||||||||| |||| ||| |||||||||||    
T  50678562 tttgattttttctttaaaagaggactgttgaattacatagggtctattgtactttactgtgaacgactaacacctaatatttttttcactttcttcatct 50678661  T
Q  436 tc 437  Q
    ||    
T  50678662 tc 50678663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 169 - 442
Target Start/End: Original strand, 9633808 - 9634082
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| ||||||||| |||| |||||||||||||||||||| | |||||||||| |||||||||  ||||| || ||||||||||||||||||||||||    
T  9633808 ttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttcaaccgtttacagttttgatcctctccgttagtttttaacatcaaa 9633907  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      ||||||||||||||| ||||||| |||| |||| |||| |||||||||||||  |||||| ||| |||||||||||||||| | || ||  |||| ||    
T  9633908 tgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaatttttaaattttgaccctttgattttttctttagaagaagatagttggat 9634007  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatcttcatctc 442  Q
    ||||||| |||| || || |||| ||||||  |||||||  ||||| ||| |||| |||||||||||||| ||||    
T  9634008 tatgtagggtcttttgtattttagtgtgaataactaacatttaatattttcctcacttttcttcatcttcttctc 9634082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 236 - 419
Target Start/End: Complemental strand, 37624586 - 37624403
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| ||||||||||||||||||||||||  ||||| |||||||||||| |||| | || |||| | || |||| |||||||| |||||||||||     
T  37624586 ttttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatattaaaaggttgtgcaccatggaccttagtaaattttttaattttaacct 37624487  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatactttt 419  Q
    |||||||||||||||||| |||||  ||||||| |||||| ||||||| || |||| |||||||||||||||||||||| ||||    
T  37624486 tttgattttttctttaaaagaggattgttgaatcatgtagggtctattgtattttagtgtgaaccactaacacctaatattttt 37624403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 238 - 414
Target Start/End: Complemental strand, 51218980 - 51218803
Alignment:
Q  238 ttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatt 337  Q
    |||||| ||||||||||||||||||||||||  ||||| |||||||||||||||||||||| |||| ||   ||||||||||||| ||||||||| ||||    
T  51218980 ttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaagatggtccaccatatgccttattaaattttttaattttaatcatt 51218881  T
Q  338 tgattt-tttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
    |||||| |||| ||||| |||||| ||||||| |||| | ||||||| |||||| |||||||||||| ||||||||||    
T  51218880 tgatttatttcattaaaagaggactgttgaatcatgtggggtctattgtactttcctgtgaaccactcacacctaata 51218803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 236 - 420
Target Start/End: Complemental strand, 30551605 - 30551421
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| |||||||||||||||| |||||||  ||||| |||||||||||| |||| |||| |||| | || |||| |||||||| |||||||||||     
T  30551605 ttttggtcatctccgttagtttttagcatcaaatgtctaaagtgaaccatattaaaaggtggtgcaccatggaccttagtaaattttttaattttaacct 30551506  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttc 420  Q
    |||||||||||||||||| |||||  |||| || |||||| ||||||| || |||| |||||||||||||||||||||| |||||    
T  30551505 tttgattttttctttaaaagaggattgttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaatatttttc 30551421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 168 - 442
Target Start/End: Complemental strand, 52743060 - 52742785
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    |||||||||||||||||||||| |||||||||||||| |||||| | ||  | || |  |||||||  || ||||| |||||||||||||||||||||||    
T  52743060 attttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatgtcgtttactgttatggtcctctccgttagtttttaacatcaa 52742961  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaa 367  Q
    |  | ||||||||||||| ||||||| |||| |||| |||| || |||| |||||  |||||||||| |||||||||||||||||| ||| |  |||| |    
T  52742960 atgtttaaggtgaaccatgtttaaaggtggtacaccatagacctaattacatttttaaattttaaccttttgattttttctttaaaagagaattgttgga 52742861  T
Q  368 ttatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatcttcatctc 442  Q
    | |   ||  |||||| || |||||||| ||||||| |||||||||| ||||||||  ||||||||||||| ||||    
T  52742860 tcacaaaggatctattgtattttactgtaaaccactgacacctaatatttttctcacctttcttcatcttcttctc 52742785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 236 - 444
Target Start/End: Complemental strand, 23082142 - 23081933
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| | ||||||||||||||||| |||| |||||| ||||||||||||||||| |||| |||| | || |||| |||||||| ||||||||||      
T  23082142 ttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccatggaccttaataaattttttaattttaacat 23082043  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatc 434  Q
    ||||||||||| |||||| | |||  |||| || |||||  ||||||| || |||| ||| ||||||||||||||||||||||||  | |||||||| ||    
T  23082042 tttgattttttttttaaaagtggattgttggataatgtaaggtctattgtattttagtgtaaaccactaacacctaatacttttcagatttttcttcctc 23081943  T
Q  435 ttcatctctc 444  Q
    ||| ||||||    
T  23081942 ttcttctctc 23081933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 13641290 - 13641380
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||| |||||    
T  13641290 ttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgttatttttt 13641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 412
Target Start/End: Original strand, 14764287 - 14764505
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaag 293  Q
    |||||| | ||||||||| ||||| ||||||  |||||||  |||| ||| |||| ||||||||||||||| |||  | ||||||||||| |||||||||    
T  14764287 aagtgtgttaatttggtctcataagtcttctgtcgtttactgttttagtcatctctgttagtttttaacattaaatgtttaaggtgaaccttatttaaag 14764386  T
Q  294 atggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttact 393  Q
     |||| |||| ||   | || |||||||| | ||||||||||||||||||||||||||||  |     ||| ||| |||||| |||||||  ||||||||    
T  14764387 gtggtccaccatacgccatactaaatttttttattttaaccatttgattttttctttaaaaaatagttgttaaatcatgtagggtctattgcactttact 14764486  T
Q  394 gtgaaccactaacacctaa 412  Q
    |||||||||||||||||||    
T  14764487 gtgaaccactaacacctaa 14764505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 236 - 419
Target Start/End: Original strand, 27689383 - 27689570
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaa----attttctaatttta 331  Q
    |||||||| ||||||||||||||||||| ||||  ||||| ||||||||||||||||| |||| || | | || ||||||||     |||| ||||||||    
T  27689383 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtccatcatggaccttattaatttttttttttaatttta 27689482  T
Q  332 accatttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatactttt 419  Q
    ||| |||||||||||||||||| ||  |  |||| || |||||| ||||||| || |||| |||||||||||||||||||||| ||||    
T  27689483 accttttgattttttctttaaaagataattgttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaatattttt 27689570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 169 - 322
Target Start/End: Original strand, 44977254 - 44977407
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||||||||||| ||||||||||| ||  ||||| | ||  |||||| |||||  |   ||||||| |||| |||||||||||||||||||    
T  44977254 ttttcactttggtcccctaactataaagtgtcttaaactggtcccttatgtcttctgccgttacctcatttggtcatctctgttagtttttaacatcaaa 44977353  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaatttt 322  Q
      ||||||||||||||||||||||| |||| ||||||| | |||||||||||||    
T  44977354 tgtctaaggtgaaccatatttaaaggtggtccaccgtaaaccttattaaatttt 44977407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 169 - 334
Target Start/End: Complemental strand, 49141579 - 49141414
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||| | |||| |||| || |||||| |||| |||||| ||||| | |||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  49141579 ttttcacttcgatcccttaactattaagtgtttcaaattggtcccataatttttctgccgtttaccattttagtcatctccgttagtttttaacatcaaa 49141480  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacc 334  Q
      ||||||||||||||||||||||| || | |||| |||| ||||| || |  | |||||||||||    
T  49141479 tgtctaaggtgaaccatatttaaagttgttccaccatagaccttataaattcatttaattttaacc 49141414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 169 - 319
Target Start/End: Original strand, 21277027 - 21277177
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| ||||||  |||||| ||||||| ||||||||||||| |||||||||||| |||||||| |||||| || ||||| ||||||||| || | |||    
T  21277027 ttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctgccgtttactattttgatcctctccattagtttttgaccttaaa 21277126  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaat 319  Q
      ||||||||||||||  |||| || |||| |||| |||| ||||||||||    
T  21277127 tgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaat 21277177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 346
Target Start/End: Complemental strand, 22766836 - 22766726
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| | ||||||||||||||||| |||| |||||| ||||||||||||||||| |||| |||| | || |||  |||||||| |||||||||||     
T  22766836 ttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccatggaccttcataaattttttaattttaacct 22766737  T
Q  336 tttgatttttt 346  Q
    |||||||||||    
T  22766736 tttgatttttt 22766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 25787247 - 25787161
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||||||||| | || ||||| ||||||||| |||||||||||    
T  25787247 ttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgccatttactattttggtcctctccgttagt 25787161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 36511407 - 36511325
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttt 258  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||| ||||||||| ||||||||||||||    
T  36511407 tttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtcatctccgttagtttt 36511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 14071286 - 14071193
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    |||||| |||||||| ||||| ||||||||||||||||||||| ||||| ||||||  ||||||||||||||||| | |||||| |||||||||    
T  14071286 ttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgtttaccattttggtcctttccgtttgtttttaac 14071193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 176 - 341
Target Start/End: Original strand, 36509851 - 36510015
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||| |||| ||||||||| ||||||||||  |||||||||||| |||||||| ||||||||  |||||||||||||||||| |||||  ||||     
T  36509851 tttggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgttagtttttaacctcaaatgtctat 36509950  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgat 341  Q
    |||| || |   ||| ||||  | |||| |||| |||||| |||||| |||||||| |||||||||    
T  36509951 ggtggactaacattatagatattccaccatagaccttatt-aattttttaattttagccatttgat 36510015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 51726910 - 51726777
Alignment:
Q  186 taacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccat 285  Q
    |||| ||||||||||||||||||||  ||||||||||||  ||||||| ||||| ||| || ||||||||||||||| | |||  ||||||||||||||     
T  51726910 taactataaagtgtctcaatttggttccataaatcttctgtcgtttactattttagtcctcaccgttagtttttaaccttaaatgtctaaggtgaaccaa 51726811  T
Q  286 atttaaagatggttcaccgtagatcttattaaat 319  Q
     |||| || |||| |||| |||| ||||||||||    
T  51726810 ctttataggtggtccaccatagaccttattaaat 51726777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 3979395 - 3979311
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttag 254  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| ||||| |||||| |||||||| ||||||||| ||||||||||    
T  3979395 tttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctctccgttag 3979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 14390292 - 14390379
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||||||| ||||| ||||| ||||||||||||||  ||||||||||||  ||||||||||||||||| |||||||||||||    
T  14390292 tttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttctttcgtttaccattttggtcctctccgttagttt 14390379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 47411016 - 47411103
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||| |||||||||| |  ||||||| ||||||||| |||||||||||    
T  47411016 attttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgtttactattttggtcatctccgttagt 47411103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 47136770 - 47136684
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| || ||||||||||| ||||||||||||||||||||  |||||||||| | |||||||| ||||||||| |||||||||||    
T  47136770 ttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgttagt 47136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 13930758 - 13930665
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    |||||| |||||||| ||||| ||||||||||||||||||||| ||||| |||| |  ||||||||||||||||| | |||||| |||||||||    
T  13930758 ttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttaccattttggtcctttccgtttgtttttaac 13930665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 341
Target Start/End: Complemental strand, 19466281 - 19466117
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||  |||| ||||||||||||||||||||| ||||||||||||  ||||||| ||| ||||  |||||||||||||||||| |||||  ||||     
T  19466281 tttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctccgttagtttttaacctcaaatgtctat 19466182  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgat 341  Q
    |||| || |   ||| |||| || |||| |||| |||||| |||||| |||||| | |||||||||    
T  19466181 ggtggactaacattatagatagtccaccatagaccttatt-aattttttaatttcagccatttgat 19466117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 26054931 - 26055020
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||||||||| ||||||||| ||||||||||  ||||||||||||  ||||||| |||||||||| || |||||||||||    
T  26054931 tttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttctgtcgtttactattttggtctccttcgttagttttt 26055020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 176 - 284
Target Start/End: Original strand, 14169659 - 14169767
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||  |||| ||||| ||||||||||||||| |||||||||| |  ||||||| ||||||||||| || ||||||||||||| | |||  |||||    
T  14169659 tttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtcttatctgttagtttttaaccttaaatgtctaa 14169758  T
Q  276 ggtgaacca 284  Q
    |||||||||    
T  14169759 ggtgaacca 14169767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 49139841 - 49139924
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||  | |||||| ||||||||  |||||||||||||||    
T  49139841 tttggtcccataactataaagtgtctcaatttggtctcataaatcttccgcagtttactattttggtaatctccgttagttttt 49139924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 25786001 - 25786087
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||||||||| |  ||||||  ||||||||| |||| ||||||    
T  25786001 ttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtttattattttggtcctctctgttagt 25786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 320
Target Start/End: Original strand, 8092642 - 8092782
Alignment:
Q  180 gtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtg 279  Q
    ||||| |||| || |||||| ||||||||||  |||||||||||  ||||||||   ||||||| | ||||||||| |||||| | ||| ||||||||||    
T  8092642 gtcccttaactattaagtgtatcaatttggttccataaatcttcctccgtttactgatttggtcctttccgttagtatttaaccttaaatatctaaggtg 8092741  T
Q  280 aaccatatttaaagatggttcaccgtagatcttattaaatt 320  Q
    |||||  |||| || |||| |||| |||| |||||||||||    
T  8092742 aaccaactttataggtggtccaccatagaccttattaaatt 8092782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 9592270 - 9592361
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||||||||||| ||||||||| |||||||| || |||||||||| |  ||||||| |||||| || | ||||||| |||||    
T  9592270 attttcactttggtcccctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgttaattttt 9592361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 13929328 - 13929411
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtt 252  Q
    |||||| ||||||||| |||| ||||||||||||||||||||| | |||||||||| ||||||| ||| |||||| | ||||||    
T  13929328 ttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatcttcttccgtttatcatcttggtcctgtccgtt 13929411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 47411524 - 47411445
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||| | |||||||| |||||| |  |||||||||||    
T  47411524 tttggttccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactattttgattctctccgttagt 47411445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 47560171 - 47560262
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||   ||||| |||| ||||||||  |||||||| ||||||||| |||||    
T  47560171 attttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgccgtttactgttttggtcatctccgttaattttt 47560262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 50679897 - 50679814
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||| |||| ||||||||||||||||||||| ||||| |||||  |||||||| | | ||||| |||||||||||||||    
T  50679897 tttggtcccttaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgttagttttt 50679814  T

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Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 42248387 - 42248298
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||| |||| |||||||||||||||||||||  ||||||||| |  ||||||||||||| ||| ||| |||||| ||||    
T  42248387 tttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctcttcgttagatttt 42248298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 52181389 - 52181304
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    ||||||| |||||||| ||||| ||||||||||||||||| ||| |||||||||| |   |||||| ||||||||| |||||||||    
T  52181389 attttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtttactattttggtcatctccgtta 52181304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 3978078 - 3978161
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    ||||| ||||||||  |||| |||||||||||||||||| || ||||| ||||||  ||||||| ||||||||| |||||||||    
T  3978078 tttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgtta 3978161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 40812687 - 40812604
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||| |||| || ||||||||||||||||| | |||| |||||| || ||||| ||||||||||| || ||||||||||    
T  40812687 tttggtcccttaactattaagtgtctcaatttggttatataactcttctgccatttactattttggtcttttctgttagttttt 40812604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 48935192 - 48935105
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||||||||||||| ||||||||||||||||||||| | ||  |||||| |||||  |  |||||||| |||||||||||||    
T  48935192 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctccgttagttt 48935105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 16218549 - 16218475
Alignment:
Q  181 tcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||||| ||||||| ||||||||||||| |||||||||| |  ||||||  ||||||||| |||||||||||    
T  16218549 tcccctaactataaagtatctcaatttggtcccataaatcttatgtcgtttaatattttggtcatctccgttagt 16218475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 22167837 - 22167905
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    |||||| ||||||||||| |||||||||||| |||||||  ||||||||  |||| |||||||||||||    
T  22167837 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggttctctctgttagtttttaac 22167905  T

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Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 35683089 - 35683181
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    ||||| |||||||||||||| ||||||||||||||||||||| | ||  |||||| |||||  |  |||||||| |||||||||  |||||||    
T  35683089 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgttacattttaac 35683181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 13642640 - 13642530
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||| ||||   |||||||||||| |||| || ||||| | |||| |||||||  ||||||||||  |||||||||||||||| | |||    
T  13642640 ttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtctcttccgttagtttttaaccttaaa 13642541  T
Q  269 aatctaaggtg 279  Q
      |||||||||    
T  13642540 tgtctaaggtg 13642530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 16217489 - 16217559
Alignment:
Q  185 ctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||| |||||||||||||||||||||  ||||||||| |  | ||||| ||||||||| |||||||||||    
T  16217489 ctaactataaagtgtctcaatttggtcctataaatcttatgtcatttactattttggtcatctccgttagt 16217559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 40811235 - 40811321
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    |||| |||| |||| || || |||||||||||| || ||||| |||| | |||||||  ||||||||| ||||||||||||||||||    
T  40811235 tttgatcccttaactattaaatgtctcaatttgatcccataactcttttgccgtttattattttggtcatctccgttagtttttaac 40811321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 2236847 - 2236888
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  2236847 tttcattttggtcccctaactataaagtgtctcaatttggtc 2236888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 2971731 - 2971780
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataa 217  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||| |||||    
T  2971731 attttcactttagtcctctaactataaagtgtctcaatttggtcccataa 2971780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 14765170 - 14765085
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaa 261  Q
    ||||||||| |||| || |||||| ||||||||||| ||||||| || | | |||||| |||| |||| ||||||||||| |||||    
T  14765170 tttggtcccttaactattaagtgtgtcaatttggtcccataaattttttgcagtttactatttcggtcctctccgttagtatttaa 14765085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 48934275 - 48934316
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  48934275 tttcattttggtcccctaactataaagtgtctcaatttggtc 48934316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 2238060 - 2237973
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| | ||  ||||||  ||||  |  |||||||| |||||||||||||    
T  2238060 tttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttagttt 2237973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 25889574 - 25889487
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||| |||||| || |||| |||||||||||||||||| ||  |||||| |||||  |  |||||||| |||||||||||||    
T  25889574 tttcattttgatccccttactataatgtgtctcaatttggtcacttatgtcttcttccgttacctcttttggtcctctccgttagttt 25889487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 211
Target Start/End: Complemental strand, 34532778 - 34532743
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    |||||||||||||| |||||||||||||||||||||    
T  34532778 tttggtcccctaactataaagtgtctcaatttggtc 34532743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 34653468 - 34653507
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttg 208  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  34653468 ttttcactttggtcccttaactataaagtgtctcaatttg 34653507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 353
Target Start/End: Original strand, 14478420 - 14478486
Alignment:
Q  287 tttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaa 353  Q
    |||||| ||||| |||| |||||| |||||| | ||||||||| |||| ||||||||||| ||||||    
T  14478420 tttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgattttttttttaaa 14478486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 20953338 - 20953411
Alignment:
Q  186 taacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||| |||||||||||||||||||||  |||||||||    | ||||||||||| ||| |||||||||| ||||    
T  20953338 taactataaagtgtctcaatttggtcctataaatcttaagtcatttaccattttagtcctctccgttagatttt 20953411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 48467294 - 48467347
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatctt 222  Q
    |||||| |||||| ||||||| ||||||||| ||||||||||| | ||||||||    
T  48467294 ttttcaatttggttccctaactataaagtgtttcaatttggtctcttaaatctt 48467347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 1873930 - 1873898
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttg 208  Q
    |||||||||||||| ||||||||||||||||||    
T  1873930 tttggtcccctaactataaagtgtctcaatttg 1873898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 156; Significance: 1e-82; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 172 - 351
Target Start/End: Complemental strand, 9558 - 9379
Alignment:
Q  172 tcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaat 271  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  9558 tcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagtttttaacataaaaaat 9459  T
Q  272 ctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttcttta 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9458 ctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttcttta 9379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 8412 - 8502
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||| ||||||||| ||||| |||||||| |||||| |||||||||||   | ||||| |||| |||| |||||||||||||||    
T  8412 ttttcactttgctcccctaactataaactgtctcaaattggtcccataaatcttcagtcatttactatttcggtcatctccgttagttttt 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 6e-78; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 170 - 437
Target Start/End: Original strand, 21387671 - 21387937
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||  |  |||||||| | || ||||||||||||||||||||    
T  21387671 tttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtcctgtctgttagtttttaacatcaaaa 21387770  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaatt 369  Q
     ||||||||||| ||||||||||| ||||||||| |||  | ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  21387771 ctctaaggtgaaacatatttaaaggtggttcaccataggccgtattaaattttttaattttaaccatttgattttttctttaaaagaggaccgttgaatt 21387870  T
Q  370 atgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttc 437  Q
    |||||| ||||||| ||||||||||| ||| |||||||||||||| |||| |||  ||||||||||||    
T  21387871 atgtagggtctattgtactttactgtaaacgactaacacctaata-ttttttcacgttcttcatcttc 21387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 176 - 437
Target Start/End: Original strand, 18693738 - 18693999
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||| |||| ||||| ||||||||| ||||| ||||||||||||  ||||  |  |||||||| |||| |||||||||||||||||||| |||||    
T  18693738 tttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtcctctctgttagtttttaacatcaaaactctaa 18693837  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtag 375  Q
    |||||||||||| ||||| ||||||||| |||| | ||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||||     
T  18693838 ggtgaaccatatataaaggtggttcaccatagaccgtattaaattttttaattttaatcatttga-tttttctttaaaagaggaccgttgaattatgtat 18693936  T
Q  376 agtctattttactttac--tgtgaaccactaacacctaatacttttctcattttcttcatcttc 437  Q
    |||||||| ||||||||  ||||||| || ||||||||||| |||| ||| |||||||||||||    
T  18693937 agtctattgtactttactgtgtgaacgaccaacacctaata-ttttttcactttcttcatcttc 18693999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 365
Target Start/End: Complemental strand, 19525371 - 19525175
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||||| |||||| |||||||||||||||||| |||||||| ||||||||| | |||    
T  19525371 ttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtttaccattttggtcctctccgtttgtttttaaccttaaa 19525272  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttg 365  Q
      |||| |||||||||  |||| |  |||| |||| |||| ||||||||||    || |||||||  |||||| |||| ||||||||  ||||||||    
T  19525271 tttctatggtgaaccaactttatatgtggtccaccatagaccttattaaatcacatatttttaactgtttgatcttttttttaaatggagaccgttg 19525175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 42510147 - 42510246
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||  |||||||||||||||||| |||||    
T  42510147 ttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctccgttagtttttaacctcaaa 42510246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 2167572 - 2167421
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaag 293  Q
    |||||| ||||||||||| |||||||||||| |||||||  |||||||||| ||| ||||||||||||| | |||  ||||||||||||||  |||| ||    
T  2167572 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggtct-ctctgttagtttttaaccttaaatgtctaaggtgaaccaactttatag 2167474  T
Q  294 atggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    ||||| |||| |||| |||||||||| || || | |||||| |||||||||||    
T  2167473 atggtccaccatagaccttattaaatcttttattattaaccgtttgatttttt 2167421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 255 - 423
Target Start/End: Original strand, 7426760 - 7426928
Alignment:
Q  255 tttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaat 354  Q
    ||||||||||||||  ||||||||||| ||||||||||| |||| |||| |||| |||||||||||||  ||||| |||| ||||||||||||||||||     
T  7426760 tttttaacatcaaatgtctaaggtgaatcatatttaaaggtggtccaccatagaccttattaaatttttaaatttcaaccttttgattttttctttaaaa 7426859  T
Q  355 gaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca 423  Q
    ||||   |||| || |||||| ||||| | || |||| ||| ||| || | ||||||||| ||||||||    
T  7426860 gaggtttgttggatgatgtagggtctactgtattttattgtaaactaccatcacctaatatttttctca 7426928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 5384430 - 5384339
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||| |||||||||||  |||||||| ||||||||| |||||||||||||||    
T  5384430 attttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttcgtccgtttactattttggtcctctccgttagttttt 5384339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 40058051 - 40058235
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| |||| |||| || |||||| |||| |||||| ||||| |||||| |||||||||||||||||| |||||||||||||||||  | |||    
T  40058051 ttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgttagtttttaatcttaaa 40058150  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaa 353  Q
      ||||||||||||||  |||| |  | || |||| |||| |||||||||| || || |||||||  |||||| |||| ||||||    
T  40058151 tgtctaaggtgaaccaactttataagtagtccaccatagaccttattaaatcttttatttttaactgtttgatcttttttttaaa 40058235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 292
Target Start/End: Complemental strand, 7345472 - 7345350
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||||||| ||||| ||||||||||||||||||||| ||||||| || |  ||||  |  |||||||| |||  | ||||||||||||||||||    
T  7345472 tttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgttatctcttttggtcctctatgatagtttttaacatcaaaa 7345373  T
Q  270 atctaaggtgaaccatatttaaa 292  Q
     ||||||||||||||||||||||    
T  7345372 ctctaaggtgaaccatatttaaa 7345350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 15613539 - 15613628
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||  ||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||| |||||    
T  15613539 tttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaattttt 15613628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 5382982 - 5383125
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||    ||||||| |||||| || |||||||||||||||||| | |||  |||||    
T  5382982 tttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgtttactattttgatcctctccgttagtttttaaccttaaatgtctaa 5383081  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaat 319  Q
    |||||| ||  |||| || |||| |||| |||| ||||||||||    
T  5383082 ggtgaatcaactttataggtggtccaccatagaccttattaaat 5383125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 18678009 - 18678084
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtct 244  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||| |||||||||    
T  18678009 ttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtttaccgttttggtct 18678084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 19827223 - 19827149
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    |||||| ||||||||| |||  ||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  19827223 ttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtc 19827149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 169 - 365
Target Start/End: Original strand, 12933784 - 12933980
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| ||||||||| |||||||||||||||||| || ||||| |||||| ||||||||||||| |||| | ||||||  |||||||| | |||    
T  12933784 ttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgtttaccatttcggtcctttccgtttatttttaaccttaaa 12933883  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttg 365  Q
     ||||| | |||| ||  |||| || || | |||| || | |||||||||| ||  | |||||||  |||||| |||| | ||||||| ||||||||    
T  12933884 tatctatgatgaatcaactttataggtgatccaccataaaccttattaaatctttcatttttaacgttttgatcttttttataaatgaagaccgttg 12933980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 169 - 365
Target Start/End: Original strand, 32734165 - 32734360
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| ||||||||| |||| || | |||||| ||||||||| ||||| ||||||  ||||||| ||||||||| | |||||||||||||||  | |||    
T  32734165 ttttcagtttggtcccttaactatta-gtgtcttaatttggtcccataactcttctgtcgtttactattttggtcatttccgttagtttttaatcttaaa 32734263  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttg 365  Q
     ||||||||||||| |  || | |||| || |||| |||| |||||||||| || || |||||||  |||||| |||| || |||||  ||||||||    
T  32734264 tatctaaggtgaacaaccttaatagatagtccaccatagaccttattaaatcttttatttttaacagtttgatatttttttaaaatggagaccgttg 32734360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 1663221 - 1663304
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||||||| |||  |||| ||||||||||| |||||||||  ||||||||||| |||||||| |||||||||||||||||||    
T  1663221 tttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccgtttactattttggtcttctccgtta 1663304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 15615042 - 15614955
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||||||| ||||| ||||||||||||||||||||  ||||||| |||| |||||||| ||||||||| |||| ||||||||    
T  15615042 tttcattttggtccgctaactataaagtgtctcaatttggttccataaattttctgccgtttactattttggtcctctctgttagttt 15614955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 15857694 - 15857611
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||| |||| ||||||||| |||||||| || |||||||||| |  ||||||||||||||||| |||||||||||||||    
T  15857694 tttggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctccgttagttttt 15857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 1273122 - 1273212
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| ||||||||  |||| ||||| ||||||||||||||| |||||||||||| | |||||| |||||||||  ||||||||||||||    
T  1273122 ttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatcttctgcagtttacaattttggtcccctccgttagttttt 1273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 12936185 - 12936095
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||| |||||||||||||||||||||  |||| |||| | | |||||||||||||||| | |||||| ||||||    
T  12936185 ttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtttaccattttggtcatttccgtttgttttt 12936095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 346
Target Start/End: Original strand, 223263 - 223436
Alignment:
Q  173 cactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatc 272  Q
    ||||||||||||||||| ||||||||| | ||||||||| ||||| |||||  |||||||| | | ||||| | ||| |||||||||||  | |||  ||    
T  223263 cactttggtcccctaactataaagtgtattaatttggtcccataagtcttcctccgtttactaatgtggtcctttccattagtttttaatcttaaatgtc 223362  T
Q  273 taaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    ||||||||||||  |||  || ||||  ||| ||||  |||||||||||| |||||| |||| |||||| ||||    
T  223363 taaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgtttgatctttt 223436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 42980791 - 42980702
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||  |||| ||||||||||||||||||||| |||| ||||||| || ||||||||||||||| | ||||||| |||||    
T  42980791 tttcattttggtcctataactataaagtgtctcaatttggtctcatatatcttctgccatttaccattttggtcctttccgttaattttt 42980702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 224673 - 224583
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||| |||||  ||| |||| | | | ||| |||||||||||||||    
T  224673 ttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtcttcctccgattactaatgtagtcatctccgttagttttt 224583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 12950343 - 12950253
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||| |||||||||||||||||||||  |||| |||| |   |||||||||||||||| | |||||| ||||||    
T  12950343 ttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgatgtttaccattttggtcatttccgtttgttttt 12950253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 19524016 - 19524105
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| ||||||||| |||| |||||||||||||||||||||  |||||| ||||  ||||||||||||||||| | |||||| ||||||    
T  19524016 ttttcaatttggtcccttaactataaagtgtctcaatttggtc-tataaattttctgtcgtttaccattttggtcatgtccgtttgttttt 19524105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 42979482 - 42979564
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtt 252  Q
    ||||| |||||||| ||||| ||||||||| |||||||||||  |||| |||||| |||||||| ||||||||| ||||||||    
T  42979482 tttcattttggtcctctaactataaagtgtttcaatttggtccaataattcttctgccgtttactattttggtcctctccgtt 42979564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 10085927 - 10085842
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||||||||| | ||||  |||||||| ||||||||||| |||||||||||| |  ||||| ||||||||| |||||||||||    
T  10085927 tttcactttggtctcttaactttaaagtgtttcaatttggtcccataaatcttctgctatttactattttggtcctctccgttagt 10085842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 365
Target Start/End: Original strand, 12947944 - 12948141
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||| |||| ||||||||| |||||||||||||||||| || ||||| |||| |  |||||||||||| |||| | ||||||  |||||||| | ||    
T  12947944 attttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgtttaccatttcggtcctttccgtttatttttaaccttaa 12948043  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttg 365  Q
    | ||||| | |||| ||  |||| || || | |||| || | |||||||||| ||  | |||||||  |||||| |||| | ||||||| ||||||||    
T  12948044 atatctatgatgaatcaactttataggtgatccaccataaaccttattaaatctttcatttttaacgttttgatcttttttataaatgaagaccgttg 12948141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 346
Target Start/End: Complemental strand, 22819564 - 22819424
Alignment:
Q  205 tttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccg 304  Q
    ||||||| ||||| |||||| |||||||| ||||||||| ||||||||||||||||||   | | |||||||||||||||   | | || |||| |||      
T  22819564 tttggtcccataactcttctgccgtttactattttggtcatctccgttagtttttaaccctatatatctaaggtgaaccaacatgataggtggtccacta 22819465  T
Q  305 tagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    ||||||||| || ||||| ||||||||||| |||||| ||||    
T  22819464 tagatcttaatagatttt-taattttaaccctttgatctttt 22819424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 26403339 - 26403424
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    ||||||| ||||||||| |||| |||||||||||||||||| || ||||||| || |  ||||||| |||||||||||||| ||||    
T  26403339 attttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcgtttactattttggtcttctctgtta 26403424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 27894106 - 27894033
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggt 242  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||   ||||||| ||||||||    
T  27894106 ttttcactttggtcccctaactataaagtgtttcaatttggtctcataaattttccgtcgtttactattttggt 27894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 12831014 - 12830906
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    |||| |||| |||| || ||||||||||||||||||  |||| |||||| | |||||| ||||||||| ||||||||| ||||||||   ||| |||| |    
T  12831014 tttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaatttttaaccctaaatatctta 12830915  T
Q  276 ggtgaacca 284  Q
    |||||||||    
T  12830914 ggtgaacca 12830906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 12862994 - 12862886
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    |||| |||| |||| || ||||||||||||||||||  |||| |||||| | |||||| ||||||||| ||||||||| ||||||||   ||| |||| |    
T  12862994 tttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaatttttaaccctaaatatctta 12862895  T
Q  276 ggtgaacca 284  Q
    |||||||||    
T  12862894 ggtgaacca 12862886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 22812471 - 22812380
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||| ||| ||||| |||| ||||| ||||||| |||| || |||||||||||| | |||||| |||||||||  ||||||||||||||    
T  22812471 attttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttactattttggtcccctccgttagttttt 22812380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 133 - 253
Target Start/End: Complemental strand, 8762520 - 8762399
Alignment:
Q  133 gcttaatatatcgtttggtcccttaannnnnnnnna-ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgttt 231  Q
    ||||||||||||||||||||||||||         | |||||| ||||||||| | || ||||| ||||||||||||||||||||||| || |  |||||    
T  8762520 gcttaatatatcgtttggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaattttatgtcgttt 8762421  T
Q  232 accattttggtcttctccgtta 253  Q
    || ||||| ||| |||||||||    
T  8762420 actattttagtcctctccgtta 8762399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 18695718 - 18695640
Alignment:
Q  181 tcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||  |||||||| | | ||||| |||||||||||||||    
T  18695718 tcccttaactataaagtgtctcaatttggtcccataagtcttcatccgtttactaatatggtcatctccgttagttttt 18695640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 38471323 - 38471437
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| ||||||||| ||||  |||| ||| ||||||||||  |||||||||||| |||||||| ||||||||  |||| |||| |||||||| | |||     
T  38471323 tttcattttggtcccttaactttaaattgtttcaatttggttccataaatcttcttccgtttactattttggttctctctgttaatttttaaccttaaat 38471422  T
Q  270 atctaaggtgaacca 284  Q
     | ||||||||||||    
T  38471423 gtttaaggtgaacca 38471437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 4568056 - 4567964
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttacc-attttggtcttctccgttagtttttaac 262  Q
    ||||| |||||||||||||| ||||||||||||||||||||| | ||  |||||| || |||||| ||||||||| |||||||||  |||||||    
T  4568056 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgcc-tttacctattttggtcatctccgttacattttaac 4567964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 15509235 - 15509312
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||||||||||| ||||||||||||||||||||| | ||  |||||| |||||  | ||||||||| |||||||||    
T  15509235 tttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctattttggtcctctccgtta 15509312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 38473637 - 38473548
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||  |||||  |||||||||| ||||||||| ||||||||||||  ||||||| ||||||||| | ||||||| |||||    
T  38473637 tttcattttggtcatctaactgtaaagtgtcttaatttggtcccataaatcttctgtcgtttactattttggtcatttccgttaattttt 38473548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 42511749 - 42511660
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttt 258  Q
    |||||| ||||||||| |||| |||||||||||||||||| |  |||||||||||| |||||| | |||||||   |||||||| |||||    
T  42511749 ttttcagtttggtcccttaactataaagtgtctcaatttgcttccataaatcttctgccgtttcctattttggctatctccgttggtttt 42511660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 15856592 - 15856743
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaag 293  Q
    |||||| |||||||| || ||||| |||||| |||||||||||||||||| | | |||| |||||||||   |||  ||||||||| ||||   ||| ||    
T  15856592 aagtgtatcaatttgatc-cataactcttctgccgtttaccattttggtcattttcgtttgtttttaaccctaaatgtctaaggtggaccaacattatag 15856690  T
Q  294 atggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
     |||| |||| |||| |||| ||| |||| ||||||||| |||||||| ||||    
T  15856691 gtggtccaccatagaccttactaagttttttaattttaatcatttgatatttt 15856743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 5975796 - 5975879
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||  ||||||||||||||||||||| ||||| |||||  | |||||| ||| ||||  |||| ||||||||||    
T  5975796 tttggtcccctaattataaagtgtctcaatttggtctcataagtcttcctctgtttactattgtggttctctctgttagttttt 5975879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 22819625 - 22819558
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    |||| |||| |||| || |||||||||||||||||| ||||| |||||| |||||||| |||||||||    
T  22819625 tttgatcccttaactattaagtgtctcaatttggtcccataactcttctgccgtttactattttggtc 22819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 22650710 - 22650669
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  22650710 tttcattttggtcccctaactataaagtgtctcaatttggtc 22650669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 21389200 - 21389136
Alignment:
Q  195 agtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||||||||| ||||| |||||  |||||||| | | ||||| |||||||||||||||    
T  21389200 agtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgttagttttt 21389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 6629764 - 6629799
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaa 204  Q
    ||||||||||||||||||||| ||||||||||||||    
T  6629764 ttttcactttggtcccctaactataaagtgtctcaa 6629799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 15510345 - 15510258
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||| ||||||||| ||||||||||||||||||||| | ||  |||||| |||||  |  |||||||| |||| ||||||||    
T  15510345 tttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctctgttagttt 15510258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 20988724 - 20988811
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||||||||||||| ||||||||||||||||| ||| | ||  |||| | |||||  |  |||||||| |||||||||||||    
T  20988724 tttcattttggtcccctaactataaagtgtctcaatttagtctcttatgtcttgtgccgttacctcttttggtcctctccgttagttt 20988811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 24761779 - 24761720
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    ||||||||||||||| || ||||| || ||| ||||||||||||||| || |||||||||    
T  24761779 aagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgtta 24761720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 326377 - 326451
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    |||||| |||| ||||  ||| ||||||||||||||||||||  ||||||||||||   ||||| ||||||||||    
T  326377 ttttcaatttgatccctcaactataaagtgtctcaatttggttgcataaatcttctgttgtttatcattttggtc 326451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 4566985 - 4567026
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||| ||||||||| |||||||||||||||||||||    
T  4566985 tttcattttgatcccctaactataaagtgtctcaatttggtc 4567026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 5061062 - 5061103
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||  |||||||||||||||||||||    
T  5061062 tttcattttggtcccctaatgataaagtgtctcaatttggtc 5061103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 5062268 - 5062227
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||  |||||||||||||||||||||    
T  5062268 tttcattttggtcccctaatgataaagtgtctcaatttggtc 5062227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 26404286 - 26404209
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    ||||||||  |||| |||||||||||||||||| || |||||||||| |  | ||||| ||||||||| || ||||||    
T  26404286 tttggtcctttaactataaagtgtctcaatttgatcccataaatcttatgtcatttactattttggtcctcaccgtta 26404209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 32522004 - 32521963
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| ||| |||||||||||||||||    
T  32522004 tttcattttggtcccctaactatagagtgtctcaatttggtc 32521963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 32521726 - 32521758
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttg 208  Q
    |||||||||||||| ||||||||||||||||||    
T  32521726 tttggtcccctaactataaagtgtctcaatttg 32521758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 143; Significance: 6e-75; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 170 - 424
Target Start/End: Complemental strand, 39983 - 39729
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||   | ||  |  |||||||| |||| ||||||||||||||||||||    
T  39983 tttcactttggtcccctaagtataaagtgtctcaatttggtcccataaatcttcccacattacctcttttggtcctctctgttagtttttaacatcaaaa 39884  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaatt 369  Q
     ||||||||||| ||||||||||| ||||||||| | || | ||||||||||| |||||||||||||||||||||||||||||| || |||| |||||||    
T  39883 gtctaaggtgaatcatatttaaaggtggttcaccatggaccgtattaaattttttaattttaaccatttgattttttctttaaaagatgaccattgaatt 39784  T
Q  370 atgtagagtctattttactttactgtgaaccactaacacctaatacttttctcat 424  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  39783 atgtagggtctattgtactttactgtgaaccactaacatctaatatttttctcat 39729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 22160 - 22250
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||| || | |||| ||||| |||||||||||| |||||||||||||||  ||||||| ||||||||| ||||||||| |||||    
T  22160 attttcactttgatctc-taactataaaatgtctcaatttgttcacataaatcttctgtcgtttactattttggtcatctccgttaattttt 22250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 6e-72; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 168 - 440
Target Start/End: Complemental strand, 37276327 - 37276038
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    |||||||||||| |||| |||| ||||||||||||||||||||| |||||||||| | |||||||  || |||||| |||| ||||||||||||||||||    
T  37276327 attttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttattatattggtcctctctgttagtttttaacatcaa 37276228  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaa 367  Q
    || ||||||||||||||||||||||| ||||||||  |||| | ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||    
T  37276227 aagtctaaggtgaaccatatttaaaggtggttcactatagaccatattaaattttttaattttaaccatttgattttttctttaaaagaggacctttgaa 37276128  T
Q  368 tta-----------------tgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatc 440  Q
    |||                 |||| |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  37276127 ttatgtaaagtctattgttatgtaaagtctattgtactttactgtgaaccactaacacctaatatttttctcactttcttcatcttcatc 37276038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 176 - 420
Target Start/End: Original strand, 36756104 - 36756349
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||| |||| ||||||||| ||||| |||||||||||||||| |  ||||||| ||||||||| ||||||||||||||||||||||||  |||||    
T  36756104 tttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtttactattttggtcatctccgttagtttttaacatcaaatttctaa 36756203  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtag 375  Q
    |||||| ||||||||||| ||||||||| ||   |||||||||||||  |||||||||| ||| |||||||||||||| ||| | ||||| || ||||||    
T  36756204 ggtgaatcatatttaaaggtggttcaccataagccttattaaatttttaaattttaaccctttaattttttctttaaaagagaatcgttggatcatgtag 36756303  T
Q  376 agtct-attttactttactgtgaaccactaacacctaatacttttc 420  Q
     |||| ||| || ||||||||||||||||||||||||||| |||||    
T  36756304 ggtctaattgtattttactgtgaaccactaacacctaatatttttc 36756349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 10052136 - 10052405
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    |||||||||||||||||||||  |||||||||||||| |||||| | ||  || ||| |||||  |  |||||||| ||||| |||||||||||||| ||    
T  10052136 attttcactttggtcccctaattataaagtgtctcaaattggtcccttatgtcatctgccgttacctcttttggtcatctcctttagtttttaacattaa 10052235  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaa 367  Q
    |  |||||| |||||||||||||||| |||| |||| || | |||||||||||||  | |||||||| |||||||||||||||||| || ||  |||| |    
T  10052236 atgtctaagatgaaccatatttaaaggtggtccaccataaaccttattaaatttttaagttttaaccctttgattttttctttaaaagatgattgttgga 10052335  T
Q  368 ttatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatcttc 437  Q
    | |||||| ||||||| || ||||||||||||||||| ||||||||  |||||||| ||||||||||||||    
T  10052336 tcatgtagggtctattgtattttactgtgaaccactaccacctaat-tttttctcacttttcttcatcttc 10052405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 178 - 414
Target Start/End: Original strand, 21670106 - 21670342
Alignment:
Q  178 tggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaagg 277  Q
    |||||||||||| | |||  ||||||| |||||| | ||  |||||| |||||  |  ||||||||||||||||||||||||||||||||| ||||||||    
T  21670106 tggtcccctaactaaaaaacgtctcaaattggtcccttatgtcttcttccgttacctcttttggtcttctccgttagtttttaacatcaaatatctaagg 21670205  T
Q  278 tgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagag 377  Q
    ||||||||||| |||  |||| |||| ||   |||||||| |||| |||||||||||||||| ||||||||||||| |||||||||||||| |||| | |    
T  21670206 tgaaccatattaaaaagtggtccaccatatgccttattaatttttttaattttaaccatttggttttttctttaaaagaggaccgttgaatcatgtgggg 21670305  T
Q  378 tctattttactttactgtgaaccactaacacctaata 414  Q
    |||||| ||||||| |||||| || | ||||||||||    
T  21670306 tctattatactttagtgtgaatcattcacacctaata 21670342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 169 - 442
Target Start/End: Original strand, 7486110 - 7486383
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| |||| |||| ||||||||  ||||||||||| |||||||||| | | |||||| ||||||||| ||||||||||||||||||||||||    
T  7486110 ttttcattttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgttagtttttaacatcaaa 7486209  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      ||||| ||||||||| ||||||  | || |||| |||| |||||||||||||  ||||||| || |||||||||||||||||| |||||  |||  ||    
T  7486210 tgtctaaagtgaaccatgtttaaatgttgtccaccatagaccttattaaatttttaaattttagccttttgattttttctttaaaagaggattgttagat 7486309  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatctc 442  Q
     || ||   |||||| || |||| ||| |||||| ||||||||||| ||||||||  |||||||||||| ||||    
T  7486310 catataagatctattgtattttattgtaaaccaccaacacctaatatttttctcaccttcttcatcttcttctc 7486383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 169 - 413
Target Start/End: Complemental strand, 39546760 - 39546516
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||| |||||||  |||||||||||||||||||| ||||||| || | ||||||||| |||||||| ||||||||||||||||||||||||    
T  39546760 ttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgttagtttttaacatcaaa 39546661  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      | |||| |||||||| ||||||| |||| |||| | || |||| ||||     ||||||||||| ||||||||||| |||||| |||||  |||| ||    
T  39546660 tgtttaagatgaaccatgtttaaaggtggtccaccatggaccttagtaaaaaaattaattttaaccctttgattttttttttaaaagaggattgttggat 39546561  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaat 413  Q
     |||| |  |||||| || ||||| ||||||||| ||||||||||    
T  39546560 catgtgggatctattgtattttaccgtgaaccacaaacacctaat 39546516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 236 - 407
Target Start/End: Original strand, 21961923 - 21962094
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| ||||||||||||||||||||||||  ||| ||||||||||| ||||||| |||| |||| ||   |||| |||||||| ||||||||||||    
T  21961923 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaaattttttaattttaacca 21962022  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaaca 407  Q
    ||||||||||||||||||  | |||| |||||| | || ||||||||| |||||||||||||||||||||||    
T  21962023 tttgattttttctttaaaacaagaccattgaatcaagttgagtctattgtactttactgtgaaccactaaca 21962094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 236 - 414
Target Start/End: Original strand, 13513520 - 13513698
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| |||||||||| |||||||||||||  | |||| |||||||||||||||  |||| |||| || | |||||||| |||| ||||||||||||    
T  13513520 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaatttttttaattttaacca 13513619  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
    ||||||||||||||||||  ||||||||||||| ||||   ||||||| ||||||||||||||||||| ||||| ||||    
T  13513620 tttgattttttctttaaaataggaccgttgaatcatgtgaggtctattgtactttactgtgaaccactcacaccaaata 13513698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 236 - 414
Target Start/End: Original strand, 13603053 - 13603231
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| |||||||||| |||||||||||||  | |||| |||||||||||||||  |||| |||| || | |||||||| |||| ||||||||||||    
T  13603053 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaatttttttaattttaacca 13603152  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
    ||||||||||||||||||  ||||||||||||| ||||   ||||||| ||||||||||||||||||| ||||| ||||    
T  13603153 tttgattttttctttaaaataggaccgttgaatcatgtgaggtctattgtactttactgtgaaccactcacaccaaata 13603231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 420
Target Start/End: Complemental strand, 13363594 - 13363410
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| ||||||||||||||||||| ||||  ||||| ||||||||||||||||| |||| |||| | || |||| |||||||| |||||||||||     
T  13363594 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccatggaccttagtaaattttttaattttaacct 13363495  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttc 420  Q
    ||| |||||||||||||| |||||  |||| || |||||| ||||||| || |||  |||||||||||||||||||||| |||||    
T  13363494 tttaattttttctttaaaagaggattgttggatcatgtagggtctattgtatttttgtgtgaaccactaacacctaatatttttc 13363410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 246 - 440
Target Start/End: Original strand, 45541594 - 45541783
Alignment:
Q  246 ctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttt 345  Q
    |||| ||| ||||||||||||||| ||||| ||||| ||||||||||| ||||||||| | ||   ||||||||||| |||||||||| |||||||||||    
T  45541594 ctccattaatttttaacatcaaaagtctaaagtgaatcatatttaaag-tggttcaccatggaatgtattaaattttttaattttaacaatttgattttt 45541692  T
Q  346 tctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttcatcttcatc 440  Q
    | |||||||||   || ||||||||||||| ||||||| ||||||||||| ||||||||| | |||||| |||||||| ||||||||||||||||    
T  45541693 t-tttaaatga---ccattgaattatgtagggtctattgtactttactgtaaaccactaatatctaatatttttctcactttcttcatcttcatc 45541783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 181 - 414
Target Start/End: Complemental strand, 44103367 - 44103132
Alignment:
Q  181 tcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtga 280  Q
    ||||||||| | |||  ||||||| |||||| | ||  |||||| |||||| |  |||||||| ||||||||||||||||||||||||  ||||||||||    
T  44103367 tcccctaactaaaaaacgtctcaaattggtctcttatgtcttcttccgtttcctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtga 44103268  T
Q  281 accatatttaaagatggttcaccgtagatcttattaa-attttctaattttaaccatttga-ttttttctttaaatgaggaccgttgaattatgtagagt 378  Q
    ||||| ||||||| |||| |||| ||   ||||||||  |||| ||||||||||||||||| ||||||| ||||| || ||||||||||| |||| | ||    
T  44103267 accatgtttaaaggtggtccaccatatgccttattaattttttttaattttaaccatttgatttttttcattaaaagaagaccgttgaatcatgtggggt 44103168  T
Q  379 ctattttactttactgtgaaccactaacacctaata 414  Q
    ||||| ||||||| ||||||||||| ||||||||||    
T  44103167 ctattgtactttattgtgaaccactcacacctaata 44103132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 169 - 346
Target Start/End: Complemental strand, 13367133 - 13366956
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||||||||||||| |||| ||||||||| | ||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||||| | |||    
T  13367133 ttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgttagtttttaaccttaaa 13367034  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
      ||||||||||||||  |||| || |||| |||| |||| |||||||||  || || |||||||| |||||| ||||    
T  13367033 tgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaaccttttatttttaaccgtttgatatttt 13366956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 169 - 359
Target Start/End: Original strand, 117081 - 117270
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||  ||||| ||| |||||||| || ||||||||||||  ||||||   |||||||| ||||||||||||||||||||||||    
T  117081 ttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtcgtttattgttttggtcctctccgttagtttttaacatcaaa 117180  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgagga 359  Q
      ||||||||||  ||| ||||||| |||| |||| |||| |||| ||||||||  ||||||| || ||||||||||||||| || |||||    
T  117181 tgtctaaggtgagtcatgtttaaaggtggtccaccatagaccttactaaatttt-aaattttagccttttgattttttctttgaaagagga 117270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 169 - 355
Target Start/End: Original strand, 44606172 - 44606358
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||| | |||||  |||||| || ||||| |||||||||||| | |||    
T  44606172 ttttcactttggtcccctaactatatagtgtttcaatttggtcccataaatcttcttctgtttattattttgatcctctccattagtttttaaccttaaa 44606271  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatg 355  Q
      ||||||||||||||  |||| || |||| |||| |||| ||| |||||| || || |||||||| |||||| |||| ||||||||    
T  44606272 tgtctaaggtgaaccaactttataggtggtccaccatagaccttgttaaatcttttatttttaaccgtttgatcttttttttaaatg 44606358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 170 - 365
Target Start/End: Original strand, 19913526 - 19913720
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||||||| ||||| ||||||||| ||||||||||| ||||| |||||| | ||||| |||||||||| |||||||||||||||||| | |||     
T  19913526 tttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtttatcattttggtcctctccgttagtttttaaccttaaat 19913625  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttg 365  Q
     ||||||||||||||  |||| ||||||| |||| ||||  |||||||||    |  ||||||||||||||| |||| ||||||||  ||||||||    
T  19913626 ttctaaggtgaaccaactttatagatggtccaccatagactttattaaatcacatgtttttaaccatttgatatttt-tttaaatggagaccgttg 19913720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 319
Target Start/End: Original strand, 36070211 - 36070361
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||| |||||||||||||||||| || |||||||||||| |||||||| ||||||||| || |||||||| ||| || | |||    
T  36070211 ttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgtttactattttggtcctccccgttagtctttgaccttaaa 36070310  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaat 319  Q
      ||||||||||||||  |||| || |||| |||| |||| ||||||||||    
T  36070311 tgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaat 36070361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 303
Target Start/End: Original strand, 36938750 - 36938848
Alignment:
Q  205 tttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcacc 303  Q
    ||||||| |||||||||||| |||||||| |||||||||||||| |||| |||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  36938750 tttggtctcataaatcttctgccgtttactattttggtcttctctgttaatttttaacatcaaatatctaaagtgaaccatatttaaaggtggttcacc 36938848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 169 - 346
Target Start/End: Complemental strand, 16363895 - 16363719
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||||| ||||| ||||||| |||||||||| || |||||||| ||| | |||||| ||||||||| |||||||||||| ||||| | |||    
T  16363895 ttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgtttactattttggtcctctccgttagttattaactttaaa 16363796  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
      ||||||||||||||  |||| |  |||| ||||||||| || || ||  ||||||||| |||||||||||||||||    
T  16363795 tgtctaaggtgaaccaactttaca-ctggtccaccgtagacctcataaatctttctaattctaaccatttgatttttt 16363719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 169 - 346
Target Start/End: Complemental strand, 24069529 - 24069352
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| |||| |||| ||||||||||||||||||||| ||||| |||||| |||||||||||||||||| | |||||  ||||||||||  |||    
T  24069529 ttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtcctttccgtctgtttttaacactaaa 24069430  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
      ||||||||| ||||   ||| || |||| |||| |||| |||| ||| |||| |||||||||||||||||| ||||    
T  24069429 tgtctaaggtggaccaacattataggtggtccaccatagaccttactaagttttttaattttaaccatttgatatttt 24069352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 355
Target Start/End: Original strand, 35943940 - 35944127
Alignment:
Q  169 ttttcactttggtcccctaacaataaag-tgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    |||||| ||||||||| |||  |||||  ||||||||||||||| |||||||||| | | |||||| ||||||||| |||||||||||||||||| | ||    
T  35943940 ttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagtttactattttggtcatctccgttagtttttaactttaa 35944039  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatg 355  Q
    |  ||||||||||||||  |||| || || | |||| ||||||||||||||| || || |||||||  |||||| |||  ||||||||    
T  35944040 atgtctaaggtgaaccaactttataggtgatccaccatagatcttattaaatcttttatttttaactgtttgatctttattttaaatg 35944127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 194 - 355
Target Start/End: Complemental strand, 2421351 - 2421189
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaag 293  Q
    |||||| ||||||||||| || ||||||||| |||||||  ||||||||| |||  ||||||||||||| | |||  ||||||||||||||  |||| ||    
T  2421351 aagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctctttgttagtttttaaccttaaatgtctaaggtgaaccaactttatag 2421252  T
Q  294 atggttcaccgtagatcttattaaattttctaattttaaccatttgat-tttttctttaaatg 355  Q
    ||||| || | |||| |||||||||| || || |||||||| |||||| ||||||||||||||    
T  2421251 atggtccatcatagaccttattaaatcttttatttttaaccgtttgatctttttctttaaatg 2421189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 168 - 285
Target Start/End: Complemental strand, 12281863 - 12281747
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||||||||||||| |||| ||||| ||||||||||| ||| | ||||| |||||| ||||||| ||||| || |||||||||||||||||||||||    
T  12281863 attttcactttggtcccgtaactataaattgtctcaattttgtctcgtaaattttctac-gtttaccgttttgatcctctccgttagtttttaacatcaa 12281765  T
Q  268 aaatctaaggtgaaccat 285  Q
    | |||||| ||| |||||    
T  12281764 atatctaatgtggaccat 12281747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 37274921 - 37275010
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||| ||||| |||||||||||||||||| || |||||||||||| |||||||| ||||||||| |||||||||||||||    
T  37274921 tttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgttagttttt 37275010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 24068363 - 24068453
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||| |||||  |||||||| | ||||||| |||||||||||||||    
T  24068363 ttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatttggtcctctccgttagttttt 24068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 29739726 - 29739636
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||| ||||||||| ||||||||||||||||||||| ||||||| |||| |||||||||||||||||| | |||||| ||||||    
T  29739726 ttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccgtttaccattttggtcatgtccgtttgttttt 29739636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 36940116 - 36940026
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||  |||||||||||| |||||||| ||||||||| ||||||||| |||||    
T  36940116 ttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgtttactattttggtcatctccgttaattttt 36940026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 38591091 - 38591010
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctcc 249  Q
    ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| | |||||||| ||||||||| |||||    
T  38591091 attttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactattttggtcctctcc 38591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 19914989 - 19914901
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    |||||| ||||||||| |||| ||||||||||||||||||  | ||||||||||||||||||||||||||||||| | |||||| ||||    
T  19914989 ttttcaatttggtcccttaactataaagtgtctcaatttgtacccataaatcttctaccgtttaccattttggtcatatccgtttgttt 19914901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 31625467 - 31625383
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||| |||||||||||||  ||||||||||||||||||||| |||||||||| | |||||||| ||||||||| |||||||||    
T  31625467 ttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgtta 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 37324764 - 37324621
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    |||||||||||||| ||||| ||||||||||||||| || |||||||| ||| ||||| |||||| |  ||||||||| ||||| || | |||  |||||    
T  37324764 tttggtcccctaactataaaatgtctcaatttggtctcaaaaatcttcgaccatttactattttgtttctctccgttaatttttcactttaaatgtctaa 37324665  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaat 319  Q
    |||||||||  |||| || |||| |||| || ||||||||||||    
T  37324664 ggtgaaccaactttataggtggtccaccataaatcttattaaat 37324621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 176 - 346
Target Start/End: Original strand, 8095386 - 8095556
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||| |||| || |||||||||||||||||| ||| | |||| |  ||||||| ||||||||| | |||||||||||||||  | |||  |||||    
T  8095386 tttggtcccttaactattaagtgtctcaatttggtcccattactcttttgtcgtttactattttggtcctttccgttagtttttaatcttaaatgtctaa 8095485  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    |||||||||  |||| || || | |||| || | |||||||||| || ||  |||||||||||||||||||    
T  8095486 ggtgaaccaactttataggtgatgcaccatataccttattaaatcttgtatctttaaccatttgatttttt 8095556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 346
Target Start/End: Original strand, 21267233 - 21267342
Alignment:
Q  237 tttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccat 336  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||  || ||| |||| |||| || | || ||||||||||  |||||||||| |    
T  21267233 tttggtcctctccgttagtttttaacatcaaatatctaaggtggaccatgattcaaggtggtccaccatatacctaattaaatttttaaattttaacctt 21267332  T
Q  337 ttgatttttt 346  Q
    ||||||||||    
T  21267333 ttgatttttt 21267342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 365
Target Start/End: Original strand, 20308663 - 20308834
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaag 293  Q
    |||||||||||||||||| ||||| ||||||  ||||||| ||||||||| | ||| ||| |||||||| | |||  ||||||||||||||  |||| ||    
T  20308663 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaatttttaaccttaaatgtctaaggtgaaccaactttatag 20308762  T
Q  294 atggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttg 365  Q
    || || | || |||| |||||||||| || || ||||||   |||||| |||| ||||||||  ||||||||    
T  20308763 atagtccgccatagaccttattaaatcttttatttttaatggtttgatcttttttttaaatggagaccgttg 20308834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 365
Target Start/End: Original strand, 21095296 - 21095467
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaag 293  Q
    |||||||||||||||||| ||||| ||||||  ||||||| ||||||||| | ||| ||| |||||||| | |||  ||||||||||||||  |||| ||    
T  21095296 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaatttttaaccttaaatgtctaaggtgaaccaactttatag 21095395  T
Q  294 atggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttg 365  Q
    || || | || |||| |||||||||| || || ||||||   |||||| |||| ||||||||  ||||||||    
T  21095396 atagtccgccatagaccttattaaatcttttatttttaatggtttgatcttttttttaaatggagaccgttg 21095467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 414
Target Start/End: Complemental strand, 39325834 - 39325671
Alignment:
Q  252 tagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatt-ttttcttt 350  Q
    |||||||||||||||||  |||||||||||| || ||||||| ||||  | | ||   |||| |||||||| ||||||||||||||||||| ||||||||    
T  39325834 tagtttttaacatcaaatgtctaaggtgaactatgtttaaaggtggtctatcatatgccttactaaattttttaattttaaccatttgatttttttcttt 39325735  T
Q  351 aaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
    ||| ||   | |||| || |||||    ||||| ||||||||||||||||| ||||||||||||    
T  39325734 aaaagaatgcagttggatcatgtacgacctattgtactttactgtgaaccattaacacctaata 39325671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 41868047 - 41867913
Alignment:
Q  122 ataaataatcggcttaatatatcgtttggtcccttaannnnnnnnna-ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatc 220  Q
    ||||||||| ||||||||| ||| |||||||||||||         | ||||||||||||||||||||| ||||||||||||||||||||| |||||||     
T  41868047 ataaataattggcttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatt 41867948  T
Q  221 ttctaccgtttaccattttggtcttctccgttagt 255  Q
    || | ||||||   ||||| ||| |||||||||||    
T  41867947 ttatgccgttttttattttagtcctctccgttagt 41867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 29738323 - 29738417
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    ||||||| |||||||   |||| ||||||||||||||||| ||| ||||| |||||| ||||||||| |||||||| |||||||| |||||||||    
T  29738323 attttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttggtcctctccgtttgtttttaac 29738417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 346
Target Start/End: Original strand, 39515232 - 39515409
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| |||||| || ||||||||||||||||||||| ||||| |||| | || |||||| |||||||| | |||||   |||||||||  |||    
T  39515232 ttttcattttgatcccctgactataaagtgtctcaatttggtctcataactcttttgccatttacctttttggtcatttccgtctatttttaacactaaa 39515331  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
      ||||||||| ||||   ||| || |||| || | |||| |||| ||| |||| |||||||||||||||||| ||||    
T  39515332 tgtctaaggtggaccaacattataggtggtccatcatagaccttactaagttttataattttaaccatttgatatttt 39515409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 34617253 - 34617101
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaag 293  Q
    |||||| ||||||| ||| ||||  |||||| ||||||| |||||||||| | ||||| ||||||||||   |||  | ||||||| ||||   ||| ||    
T  34617253 aagtgtgtcaatttagtcccatagctcttcttccgtttatcattttggtcatttccgtcagtttttaaccctaaatgtataaggtggaccaacattacag 34617154  T
Q  294 atggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
     |||| ||||||||| |||| |||||||| |||||||||||||||||| ||||    
T  34617153 gtggtccaccgtagaccttactaaattttttaattttaaccatttgatatttt 34617101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 38029 - 38110
Alignment:
Q  180 gtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaa 261  Q
    |||||||||| ||||||||| | ||||||||| ||||| |||||  |||||||| ||| ||||| |||||||||||||||||    
T  38029 gtcccctaactataaagtgtttgaatttggtctcataagtcttcctccgtttactattgtggtcctctccgttagtttttaa 38110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 346
Target Start/End: Complemental strand, 7816155 - 7815995
Alignment:
Q  185 ctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaacca 284  Q
    ||||| ||||||||||||||||||||| ||||| |||||| ||| ||| |||||||||| | | |||  ||||||||||  |||  ||||||||| ||||    
T  7816155 ctaactataaagtgtctcaatttggtctcataattcttctgccg-ttatcattttggtcattttcgtctgtttttaacactaaatgtctaaggtggacca 7816057  T
Q  285 tatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
       ||| || |||| | || |||| |||| ||| |||| |||||||||||||||||| ||||    
T  7816056 acattataggtggtcctccatagaccttactaagttttttaattttaaccatttgatatttt 7815995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 8395064 - 8395121
Alignment:
Q  205 tttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    ||||||| ||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  8395064 tttggtcccataattcttcttccgtttaccattttggtcctctccgttagtttttaac 8395121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 27750682 - 27750618
Alignment:
Q  191 ataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||| ||||||||||||| |||||||||| ||  |||||| |||||||||||||||||||||    
T  27750682 ataaagtatctcaatttggtcccataaatcttatattgtttactattttggtcttctccgttagt 27750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 31623939 - 31624023
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||| |||||||||||||| ||||||||| ||||||||||| |||||||||| |  ||||||  ||||| ||| |||||||||    
T  31623939 ttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtttattattttagtcctctccgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 1570290 - 1570203
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||| ||||||| | |||| |||||||||||||||||||||   ||||| || | |||||||| ||||||||| |||||||||||    
T  1570290 attttcaatttggtctcataactataaagtgtctcaatttggtctattaaattttatgccgtttactattttggtcatctccgttagt 1570203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 3237457 - 3237536
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||||||||||  |||| ||||||||||||||| ||||||| |||| |||||||| |||||| || | |||||||||    
T  3237457 tttggtcccctaactttaaactgtctcaatttggtcccataaatattctgccgtttacaattttgatcatttccgttagt 3237536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 346
Target Start/End: Complemental strand, 7796868 - 7796714
Alignment:
Q  191 ataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatattta 290  Q
    ||||||||||||||||||||| ||||| |||||| ||| ||| |||||||||| | | |||  ||||||||||  |||  ||||||||| ||||   |||    
T  7796868 ataaagtgtctcaatttggtctcataactcttctgccg-ttatcattttggtcattttcgtctgtttttaacactaaatgtctaaggtggaccaacatta 7796770  T
Q  291 aagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
     || |||| | || |||| |||| ||| |||| |||||||||||||||||| ||||    
T  7796769 taggtggtcctccatagaccttactaagttttttaattttaaccatttgatatttt 7796714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 36071461 - 36071374
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtt 256  Q
    |||||| ||||||||| |||| ||| ||| | |||| |||||| ||||| |||||||||||||| |||||||||| |||| |||||||    
T  36071461 ttttcaatttggtcccttaactatagagtatttcaaattggtcccataactcttctaccgtttatcattttggtcatctctgttagtt 36071374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 37472443 - 37472510
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    |||||||| ||||| ||||||||||||||||||||| ||||| |||| |  |||||||||||||||||    
T  37472443 tttggtcctctaactataaagtgtctcaatttggtcccataagtcttttgtcgtttaccattttggtc 37472510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 43277997 - 43277930
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    |||||||||||||| ||||| ||||||||||||||| | |||||||| | |||||||| |||||||||    
T  43277997 tttggtcccctaactataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggtc 43277930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 43275783 - 43275869
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||| ||||||| ||||||||||||||||| ||| ||||| |||| | |||||||  ||||||||| || ||||||||    
T  43275783 ttttcaatttggttccctaactataaagtgtctcaatttagtcccataactcttatgccgtttattattttggtcctcaccgttagt 43275869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 37474119 - 37474036
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtt 252  Q
    |||||| ||||||||| |||| |||||||||||||||||||||    ||||||||| ||||||| ||| |||||| | ||||||    
T  37474119 ttttcaatttggtcccttaactataaagtgtctcaatttggtcctggaaatcttcttccgtttatcatcttggtcctgtccgtt 37474036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 38589853 - 38589924
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttg 240  Q
    |||||| |||||||| ||||| |||||||| |||||||||||| |||||||||| |  ||||||| ||||||    
T  38589853 ttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgtcgtttactattttg 38589924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 41866926 - 41867013
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||||||||| |||| |||| ||||||||| ||||||||||| ||||||| ||   || ||||| ||||||||| |||| ||||||    
T  41866926 attttcactttgatcccttaactataaagtgtttcaatttggtcccataaattttacgccatttactattttggtcatctctgttagt 41867013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 43386785 - 43386730
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttct 224  Q
    |||||| |||||||||||||| ||||| ||||||||||||||| ||||| ||||||    
T  43386785 ttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 43386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 346
Target Start/End: Complemental strand, 7770981 - 7770804
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||| |||| ||  ||||| ||||||||| ||||||||||| ||||| |||| | ||| ||| |||||||||| | | |||  ||||||||||  ||    
T  7770981 attttcattttgatcatctaactataaagtgtttcaatttggtctcataactcttatgccg-ttatcattttggtcattttcgtctgtttttaacactaa 7770883  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    |  ||||||||| ||||   ||| || |||| | || |||| |||| ||| |||| |||||||||||||||||| ||||    
T  7770882 atgtctaaggtggaccaacattataggtggtcctccatagaccttactaagttttttaattttaaccatttgatatttt 7770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 14820233 - 14820279
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatctt 222  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  14820233 tttggtcccctaactataaagtgtctcaatttagtcccataaatctt 14820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 21267197 - 21267239
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  21267197 ttttcactttggtcctctaactataaagtgtctcaatttggtc 21267239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 36734628 - 36734566
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtt 230  Q
    ||||||||||||||| ||| || |||| |||||||||||||||| ||||||| |||| |||||    
T  36734628 attttcactttggtcgcctgactataatgtgtctcaatttggtcccataaattttctgccgtt 36734566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 292
Target Start/End: Complemental strand, 41522746 - 41522648
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaa 292  Q
    |||||| |||||||||||  |||| |||||| ||||||||  |||| ||| | ||||| | |||||||||||||| || |||| |||||||| ||||||    
T  41522746 aagtgtgtcaatttggtcctataagtcttctgccgtttactgttttagtcctttccgtcaatttttaacatcaaatatttaagatgaaccatgtttaaa 41522648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 6844655 - 6844614
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  6844655 tttcattttggttccctaacaataaagtgtctcaatttggtc 6844614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 45385876 - 45385787
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||| |||  ||||||||| |||||||| ||  ||||||||| |  ||||||||||||| ||| |||||||||| ||||    
T  45385876 tttcattttggtcccataattataaagtgtttcaatttgatcctataaatcttatgtcgtttaccattttagtcctctccgttagatttt 45385787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 6843795 - 6843843
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttct 224  Q
    |||||||||||||| ||||||||||||||||||||| | || |||||||    
T  6843795 tttggtcccctaactataaagtgtctcaatttggtcccctatatcttct 6843843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 9854833 - 9854775
Alignment:
Q  295 tggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaa 353  Q
    |||| |||| |||||| |||||| | ||||||||| |||||||||||||||| ||||||    
T  9854833 tggtccaccatagatcctattaattcttctaatttaaaccatttgattttttttttaaa 9854775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 10053827 - 10053785
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    |||||||||||||||| |||| |||||||||||||| ||||||    
T  10053827 ttttcactttggtcccttaactataaagtgtctcaagttggtc 10053785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 34616179 - 34616257
Alignment:
Q  186 taacaataaagtgtctcaatttggtcacataaa-----tcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||| ||||||||||||||||||||| ||||||     |||| |  ||||||||||||||||| | |||||||||||||    
T  34616179 taactataaagtgtctcaatttggtcccataaatcttttcttttgtcgtttaccattttggtcatttccgttagttttt 34616257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 36757306 - 36757260
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatctt 222  Q
    |||||||||||||| |||||  |||||||||||||| ||||||||||    
T  36757306 tttggtcccctaactataaaacgtctcaatttggtctcataaatctt 36757260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 37323381 - 37323435
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttc 223  Q
    |||||| |||||| ||||||| ||||| |||||||||||| || |||||||||||    
T  37323381 ttttcaatttggttccctaactataaaatgtctcaatttgatcccataaatcttc 37323435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 4807406 - 4807483
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||||||||||| |||| || | ||||||||||| ||||||||||   |||||||  ||||||||  |||||||||    
T  4807406 tttggtcccctaactataacgtttttcaatttggtcccataaatcttacgccgtttattattttggttctctccgtta 4807483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 38696470 - 38696545
Alignment:
Q  295 tggttcaccgtagatcttattaaattttctaattttaaccatttgattttttcttta--aatgaggaccgttgaat 368  Q
    |||| |||| ||||||| ||||| |||| ||||||||||| |||||||||||  |||  || ||||||||||||||    
T  38696470 tggtccaccatagatctaattaatttttataattttaaccctttgatttttttgttaagaaagaggaccgttgaat 38696545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 110; Significance: 3e-55; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 169 - 414
Target Start/End: Complemental strand, 13287 - 13042
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||| ||||| ||||||||||| ||| ||||| |||||| |||||  |  |||||||| | ||| |||| |||||||||||||    
T  13287 ttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataactcttcttccgttacctcttttggtcctatccattaggttttaacatcaaa 13188  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      |||||||||||||||||||||||||||| |||| || | | || |||| ||| |||| ||||||||||||||||||||||||| |||||| |||||||    
T  13187 tgtctaaggtgaaccatatttaaagatggtccaccatataccctactaaaatttttaatcttaaccatttgattttttctttaaaagaggactgttgaat 13088  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
    | ||||| ||||||| ||||||| ||| ||||||||||| ||||||    
T  13087 tttgtagggtctattgtactttattgtcaaccactaacatctaata 13042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 11738 - 11829
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||| ||| |||||||||  ||||||||| ||||||||||| | ||  |||||| | |||  | ||||||||| |||||||||||||||    
T  11738 attttcagtttagtcccctaattataaagtgtttcaatttggtcccttatgtcttctccagttacctattttggtcctctccgttagttttt 11829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 414
Target Start/End: Original strand, 43894138 - 43894383
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||||| | || | | |||  |  |||||||| | |||||| |||||||||||||||    
T  43894138 ttttcagtttggtcccctaactataaaatgtctcaatttggtcacataactatttttctgttacctcttttggtcatatccgttggtttttaacatcaaa 43894237  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      ||| |||||||||||||||||||||||| |||  ||   | ||||||||||| |||| ||||||||||||||||||||||||| |||| | |||||||    
T  43894238 tgtctgaggtgaaccatatttaaagatggtccacaatatgccctattaaattttttaatcttaaccatttgattttttctttaaaagagggctgttgaat 43894337  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
    | ||||| ||||||| ||||||| ||| ||||||||||| ||||||    
T  43894338 tttgtagggtctattgtactttagtgtcaaccactaacatctaata 43894383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 169 - 442
Target Start/End: Original strand, 11094559 - 11094831
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||| ||||||||| |||||| ||||||||||| |||||||||  |||||| |||| ||||||||  |||||||| ||| ||||||||||||||||||||    
T  11094559 tttttactttggtctcctaactataaagtgtcttaatttggtcctataaattttctgccgtttactgttttggtcctcttcgttagtttttaacatcaaa 11094658  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      ||||||||  ||||| ||||||  ||||||||| |||| |||||||||||||  ||| |||||| | |||||||||||||||| |||||  |||| ||    
T  11094659 tgtctaaggt--accatgtttaaatgtggttcaccatagaccttattaaatttttaaatattaaccttgtgattttttctttaaaagaggattgttggat 11094756  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatcttcatctc 442  Q
     |||||  ||||||| || |||| ||| |||||| ||||||||||| ||||||||  ||||||||||||| ||||    
T  11094757 catgtaaggtctattgtattttattgtaaaccaccaacacctaatatttttctcacctttcttcatcttcttctc 11094831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 238 - 414
Target Start/End: Complemental strand, 2293539 - 2293362
Alignment:
Q  238 ttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatt 337  Q
    |||||| ||||||||||||||||| ||||||  ||| | ||||| |||||||||||||||| |||| ||   ||||||||||||| ||||||||||||||    
T  2293539 ttggtcctctccgttagtttttaaaatcaaatgtctgaagtgaatcatatttaaagatggtccaccatatgccttattaaattttttaattttaaccatt 2293440  T
Q  338 tgattt-tttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
    |||||| |||| ||||| |||||||||||||| |||| | ||||||| ||||||||||||||||||| ||||||||||    
T  2293439 tgatttatttcattaaaagaggaccgttgaatcatgtggggtctattgtactttactgtgaaccactcacacctaata 2293362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 185 - 437
Target Start/End: Original strand, 44302769 - 44303011
Alignment:
Q  185 ctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaacca 284  Q
    ||||| |||||||||||||||||| || ||||||| |||| || ||  |  |||||||| |||||||||||||||||||| ||||  ||||||||||| |    
T  44302769 ctaactataaagtgtctcaatttgatcccataaattttctgccattacctcttttggtcctctccgttagtttttaacattaaaagactaaggtgaacta 44302868  T
Q  285 tatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagagtctattt 384  Q
    ||||||||| ||||||||| |||| | ||||||||||| |||||||||||||||||||  ||||||||| || ||  ||||||||||||||  | |||      
T  44302869 tatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgattgattctttaaaagatgattgttgaattatgtaggatatat-- 44302966  T
Q  385 tactttactgtgaaccactaacacctaatacttttctcattttcttcatcttc 437  Q
            ||| || |||||||||||||||||||||||| |||||||||||||    
T  44302967 --------tgtaaatcactaacacctaatacttttctcactttcttcatcttc 44303011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 169 - 421
Target Start/End: Original strand, 35787829 - 35788081
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||||| ||||| ||||| ||| ||||||||||| ||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||    
T  35787829 ttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtcctctccgttagtttttaacatcaaa 35787928  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      |||||||| || ||| ||||||| |||| |||| ||||  ||||||||||||  |||||||||| ||| | |||||| ||||| || ||  |||| ||    
T  35787929 tgtctaaggtaaatcatgtttaaaggtggtccaccatagactttattaaatttttaaattttaaccttttaaatttttcattaaaagatgattgttggat 35788028  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaatacttttct 421  Q
     ||| || |||||||  | |||| ||| || ||| ||||||||||| ||||||    
T  35788029 catgcagggtctattgcattttattgtaaatcaccaacacctaatatttttct 35788081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 169 - 423
Target Start/End: Complemental strand, 39592372 - 39592119
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||||||| |||||||||| |||||||||||||| ||||||   ||  ||||||  |||||||  |||||||  ||||||||| ||||||||||||||    
T  39592372 ttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtttactgttttggttctctccgttaatttttaacatcaaa 39592273  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      |||||||||| |||| ||||||| |||| || | || | |||||||||||||  |||||||||| ||||||||||||| |||| |||||  |||| ||    
T  39592272 tgtctaaggtgagccatgtttaaaggtggtccatcatataccttattaaatttttaaattttaaccttttgattttttctataaaagaggattgttggat 39592173  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca 423  Q
     |||||| ||||||| || |||| ||| |||||| ||||||||||| ||||||||    
T  39592172 catgtag-gtctattatattttattgtaaaccaccaacacctaatatttttctca 39592119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 169 - 444
Target Start/End: Complemental strand, 47668680 - 47668411
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||||||||||| |||||||||||||| |||||| | || ||| ||| |||||||   |||||||| |||| |||||||||||||||||||    
T  47668680 ttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgccgtttattgttttggtcctctctgttagtttttaacatcaaa 47668581  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttga-ttttttctttaaatgaggaccgttgaa 367  Q
     ||||||||| ||||||  ||||||||||| |||| |||| ||| |||        |||||||||| ||||| ||||||||||||| |||||  |||  |    
T  47668580 tatctaaggtaaaccatggttaaagatggtccaccatagaccttttta--------aattttaaccttttgatttttttctttaaaagaggattgttcga 47668489  T
Q  368 ttatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatcttcatctctc 444  Q
    | |||||| ||||||| || |||| |||||||||||||||  ||||| | || ||| |||||||||||||| ||||||    
T  47668488 tcatgtagggtctattgtattttagtgtgaaccactaacatttaatattcttttcacttttcttcatcttcttctctc 47668411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 194 - 412
Target Start/End: Complemental strand, 38419075 - 38418857
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaag 293  Q
    |||||| ||||||||||| ||||| |||||| ||||||||  |||| ||| |||||||||||||||||||| |||  | |||| ||||||||||||| ||    
T  38419075 aagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgttagtttttaacattaaacgtttaagatgaaccatatttatag 38418976  T
Q  294 atggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttact 393  Q
     |||| |||| ||   |||| |||||||| | ||||||||||||||||||||||||||||  |   | ||| ||| |||||| ||||||| |||||||||    
T  38418975 gtggtccaccatatgccttactaaatttttttattttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgtactttact 38418876  T
Q  394 gtgaaccactaacacctaa 412  Q
     ||||||||||||||||||    
T  38418875 atgaaccactaacacctaa 38418857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 236 - 437
Target Start/End: Complemental strand, 29687994 - 29687791
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| ||||| ||||||||||||||||||  |||| || ||||||||||||||| |||| ||||||| | |||||||||||||  | |||||||||    
T  29687994 ttttggtcatctcctttagtttttaacatcaaatgtctacggcgaaccatatttaaaggtggtccaccgtaaaccttattaaatttttaagttttaacca 29687895  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaa-tacttttctca-ttttcttcat 433  Q
    |||||||||||||||||| ||| |  |||| || |||||  ||||||| || |||| |||||||||||| ||||||| |  |||||||| ||||||||||    
T  29687894 tttgattttttctttaaaagagaattgttggatcatgtaaggtctattgtattttattgtgaaccactaccacctaattttttttctcacttttcttcat 29687795  T
Q  434 cttc 437  Q
    ||||    
T  29687794 cttc 29687791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 169 - 303
Target Start/End: Original strand, 86836 - 86970
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||| ||||||| ||||||  ||||||||||||| ||||||| |||| ||||||||  |||||||||||||||||||||||||||||||||    
T  86836 ttttcactttggttccctaactataaagcatctcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaa 86935  T
Q  269 aatctaaggtgaaccatatttaaagatggttcacc 303  Q
      ||||||||||||||| ||||||| |||| ||||    
T  86936 tgtctaaggtgaaccatgtttaaaggtggtccacc 86970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 169 - 359
Target Start/End: Complemental strand, 6616294 - 6616103
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||||||||||| |||||||||||||| |||||| | || || ||||  ||||||   |||||||| ||||| ||||||||||||||||||    
T  6616294 ttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtttattgttttggtcctctcctttagtttttaacatcaaa 6616195  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattt-tttctttaaatgagga 359  Q
      || ||||||||| ||  |||||||| || |||  |||| |||||||||||||  |||||||||| |||||||| |||||||||| |||||    
T  6616194 tgtcaaaggtgaacaatgattaaagatagtccactatagaccttattaaatttttaaattttaaccttttgatttatttctttaaaagagga 6616103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 236 - 398
Target Start/End: Complemental strand, 36604857 - 36604694
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaa-attttctaattttaacc 334  Q
    |||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||  |||  |||| ||   ||||||||  |||| |||||||||||    
T  36604857 ttttggtcctctccgttagtttttaatatcaaatatctaagatgaaccatattaaaaagtggcccaccatatgccttattaattttttttaattttaacc 36604758  T
Q  335 atttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaa 398  Q
    ||||||||||||||||||| ||||||| |||||| |||| | ||||||| ||||||||||||||    
T  36604757 atttgattttttctttaaaagaggaccattgaatcatgtggggtctattatactttactgtgaa 36604694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 346
Target Start/End: Original strand, 56000319 - 56000497
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||| |||| ||||||||| ||||||||||||||||| |||  |||| |||||| |||||||||||||||||||| ||| | |||||||||||  ||    
T  56000319 attttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgtttaccattttggtcttttccatcagtttttaacactaa 56000418  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    |  ||||||||| ||||   ||| || |||| ||||||||| |||| ||| |||| |||||||||||||||||| ||||    
T  56000419 atgtctaaggtggaccaacattataggtggtccaccgtagaccttactaagttttttaattttaaccatttgatatttt 56000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 33377448 - 33377361
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||    
T  33377448 attttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcctctccgttagt 33377361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 353
Target Start/End: Original strand, 38370314 - 38370500
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||| |||||||  ||||| ||||||||| ||||||||||| ||||| ||||||  ||||||||||||||||| |||||||||||||||||| | ||    
T  38370314 attttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtcgtttaccattttggtcatctccgttagtttttaaccttaa 38370413  T
Q  268 aa-atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaa 353  Q
    ||   |||||||||||||  |||  || |||| |||| |||||||||| || |  | ||||||||||| |||||| |||| ||||||    
T  38370414 aatgactaaggtgaaccaactttgtaggtggtccaccatagatcttataaattcatttaattttaaccctttgatattttttttaaa 38370500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 169 - 333
Target Start/End: Complemental strand, 11115063 - 11114899
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||| ||||||| ||||||||||||| ||||| ||||||  ||||||||||||||| | |||||||||||||||||| | |||    
T  11115063 ttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcgtttaccattttggacctctccgttagtttttaaccttaaa 11114964  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaac 333  Q
      |||||| |||||||  |||  || ||||  ||| ||||  ||||||||| || ||||||||||    
T  11114963 tgtctaagctgaaccaactttgtaggtggtctaccatagactttattaaatgttttaattttaac 11114899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 34438450 - 34438610
Alignment:
Q  180 gtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtg 279  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||  |||| ||||||||||||| |||||  |||| ||||    
T  34438450 gtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctctgttagtttttaacctcaaatgtctatggtg 34438549  T
Q  280 aaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgat 341  Q
     || |   ||| |||| || |||| |||| |||||| |||||| |||||| |||||||||||    
T  34438550 gactaacattatagatagtccaccatagaccttatt-aattttttaatttcaaccatttgat 34438610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 310 - 423
Target Start/End: Original strand, 52980158 - 52980271
Alignment:
Q  310 cttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacc 409  Q
    |||||||||||||  |||||||||| ||| |||||||||||||| |||||  |||| ||||||||||||||||| || |||| ||| |||||| ||||||    
T  52980158 cttattaaatttttaaattttaaccttttaattttttctttaaaagaggattgttggattatgtagagtctattgtattttattgtaaaccaccaacacc 52980257  T
Q  410 taatacttttctca 423  Q
    ||||| ||||||||    
T  52980258 taatatttttctca 52980271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 11113775 - 11113866
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttta 260  Q
    |||||| ||| ||||| |||| ||||||||||||||||||||| ||||| |||||| |||||||||||||||||| | ||||||||||||||    
T  11113775 ttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgtttaccattttggtcatttccgttagttttta 11113866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 30683111 - 30683016
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaaca 263  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||  ||||| |   ||||||||||||||||||||||||||||    
T  30683111 attttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggccgttaattcttttggtcttctccgttagtttttaaca 30683016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 346
Target Start/End: Complemental strand, 3533676 - 3533514
Alignment:
Q  184 cctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaacc 283  Q
    |||||| |||||||||||||||||||||  |||| |||||||| |||||||||||||||| | ||||| |||||||||||  |||  ||||||||  |||    
T  3533676 cctaactataaagtgtctcaatttggtccgataactcttctactgtttaccattttggtcctttccgtcagtttttaacactaaatgtctaaggtcgacc 3533577  T
Q  284 atatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    |   ||| ||  ||| |||| |||| |||| ||| |||| |||||||||||||||||| ||||    
T  3533576 aacattataggcggtccaccatagaccttactaagttttttaattttaaccatttgatatttt 3533514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 365
Target Start/End: Complemental strand, 6140413 - 6140247
Alignment:
Q  199 tctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggt 298  Q
    ||||||||||||  ||||| ||||||  ||||||| ||||||||| | |||||||||||||||| | ||| |||||||||||||||  |||| || | ||    
T  6140413 tctcaatttggttccataactcttctgtcgtttactattttggtcatttccgttagtttttaaccttaaatatctaaggtgaaccaactttataggtagt 6140314  T
Q  299 tcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttg 365  Q
     |||| |||| |||||||||| || || |||||||  |||||| |||| ||||||||  ||||||||    
T  6140313 ccaccatagaccttattaaatcttttatttttaacagtttgatcttttttttaaatggagaccgttg 6140247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 346
Target Start/End: Complemental strand, 48207800 - 48207625
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| ||||||| |||||  |||||||||||||||||||||| |||| ||||||||||||||| ||| |||||  ||| |||| |||||||| | |||    
T  48207800 ttttcattttggtctcctaattataaagtgtctcaatttggtcatataactcttctaccgtttacaattgtggtcccctctgttattttttaaccttaaa 48207701  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
      ||||||||||||||  ||  |||  | |  ||| ||||| |||||||||||| ||||||||||| |||||| ||||    
T  48207700 tgtctaaggtgaaccaacttataag--gatctaccatagattttattaaattttttaattttaaccgtttgatctttt 48207625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 26393193 - 26393033
Alignment:
Q  186 taacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccat 285  Q
    |||| ||||||||||||||||||||| ||||| ||||||  ||||||||||||||| |   |||||  ||||||||||  |||  ||||||||||||||     
T  26393193 taactataaagtgtctcaatttggtcccataactcttctgtcgtttaccattttggacacttccgtctgtttttaacactaaatgtctaaggtgaaccaa 26393094  T
Q  286 atttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
      ||| || |||| |||| |||| |||| ||| |||| |||||||||||||||||| ||||    
T  26393093 cattataggtggtccaccatagaccttactaagttttttaattttaaccatttgatatttt 26393033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 346
Target Start/End: Original strand, 29663689 - 29663852
Alignment:
Q  183 ccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaac 282  Q
    ||||||| ||||| ||||||||||||||| ||||| |||||| ||||||||||||||| |||| ||||||   ||||||||| |||  ||||||||||||    
T  29663689 ccctaactataaattgtctcaatttggtcccataactcttctgccgtttaccattttgatcttttccgtttaattttaacattaaatgtctaaggtgaac 29663788  T
Q  283 catatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    ||   ||| || |||| |||| || | |||| |||  ||| |||||||||||| ||||| ||||    
T  29663789 caacattataggtggtccaccataaaccttactaagatttttaattttaaccacttgatatttt 29663852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 46796102 - 46796019
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||  |||||||| ||| ||||| |||||||||||||||    
T  46796102 tttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactattgtggtcctctccgttagttttt 46796019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 5688720 - 5688634
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||||||||| ||||||||||||||||||||  |||||||||| |  ||||||| ||||||||| |||||||||||    
T  5688720 ttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctccgttagt 5688634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 15787585 - 15787495
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||| | || | |||||||||||||||||| ||||| ||| |||||    
T  15787585 ttttcattttggtcccctaactataaagtgtctcaatttggtcccataacttttttgccgtttaccattttggtcctctccattaattttt 15787495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 284
Target Start/End: Original strand, 17319092 - 17319190
Alignment:
Q  186 taacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaacca 284  Q
    |||| ||||||||| ||||||||||  ||||||||||||  ||||||| |||||||||||| ||||||||||||||| | |||  ||||||||||||||    
T  17319092 taactataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtcttcaccgttagtttttaaccttaaatgtctaaggtgaacca 17319190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 27408796 - 27408870
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    |||||| |||||||  ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  27408796 ttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtc 27408870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 37559031 - 37559117
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||||||||| ||||| ||||||||||||||| |||||| |||  ||||||||| ||||||||| |||||||||||    
T  37559031 ttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtttactattttggtcatctccgttagt 37559117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 15446752 - 15446663
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||  ||||  ||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  15446752 tttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttctaccgtttactattttggtcctctccgttagttttt 15446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 28103568 - 28103479
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| |||||  ||||| |||||||||||||||||| | |||||| ||||||    
T  28103568 tttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctgccgtttaccattttggtcctttccgtttgttttt 28103479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 333
Target Start/End: Original strand, 50530543 - 50530700
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||  |||| || |||||||||||  ||||| ||||| ||||||| ||||||| ||||||||| | || |||| |||||||| | |||| |||||    
T  50530543 tttggtcctttaactattaagtgtctcaaaatggtcccataactcttctatcgtttactattttggtcatttctgttaatttttaaccttaaaagtctaa 50530642  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaac 333  Q
    |||||||||  |||| || | || |||| |||| ||||||||||||| || |||||||    
T  50530643 ggtgaaccaactttataggtagtccaccatagaccttattaaattttttatttttaac 50530700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 5687216 - 5687292
Alignment:
Q  177 ttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||| | |||||||| ||||||||| |||||||||    
T  5687216 ttggtcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 34439734 - 34439654
Alignment:
Q  178 tggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttt 258  Q
    ||||||| |||| ||||| ||| ||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||||||    
T  34439734 tggtcccttaactataaaatgtttcaatttggtcccataaatcttctgccgtttactattttggtcatctccgttagtttt 34439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 21104393 - 21104310
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtt 252  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||  ||||||  ||||||||||||||||| | ||||||    
T  21104393 ttttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgtttaccattttggtcctttccgtt 21104310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 44128418 - 44128331
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||   |||||||| | |||||||| ||||||||| |||||||||||    
T  44128418 attttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcctctccgttagt 44128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 27410751 - 27410686
Alignment:
Q  183 ccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctcc 249  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  27410751 ccctaactataaagtgtctcaatttggtc-cataaatcttcttccgtttaccattttggtcctctcc 27410686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 44305062 - 44304972
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||| | |||||||||||||||||||  ||||||||||  | |||||| ||||||||| ||||||||| |||||    
T  44305062 ttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgctgtttactattttggtcatctccgttaattttt 44304972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 346
Target Start/End: Complemental strand, 38555359 - 38555182
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||| |||||||||||||||| ||||||||| | |||||||||||| || |||||  |||||||| |   ||||| | |||||||||||||||  | |||    
T  38555359 tttttactttggtcccctaactataaagtgtattaatttggtcacagaagtcttcctccgtttactaacgtggtcatttccgttagtttttaatcttaaa 38555260  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
      ||||||||||||||  |||  || ||||  ||| ||||  |||||||||||| |||||| |||| |||||| ||||    
T  38555259 tgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgtttgatctttt 38555182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 53400219 - 53400308
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||| |||| |||||||||||||||||||||  ||||||||| |  ||||||||||||| ||| |||||||||| ||||    
T  53400219 tttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctctccgttagatttt 53400308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 37560382 - 37560298
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||||||||    ||||||| || |||||| |||||||||    
T  37560382 ttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttacgacgtttactatcttggtcctctccgtta 37560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 1273509 - 1273430
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||| |  ||||| | ||||||||| |||||||||||    
T  1273509 tttggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttgctattttggtcctctccgttagt 1273430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 15786985 - 15787100
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| ||||||||| ||||| ||||||||||||||| ||||| | |||| ||||||| |||| || || ||||||||| |||||||| | |||    
T  15786985 ttttcattttgttcccctaactataaactgtctcaatttggtcccataacttttctgccgtttatcattatgatcctctccgttaatttttaaccttaaa 15787084  T
Q  269 aatctaaggtgaacca 284  Q
      ||||||||| ||||    
T  15787085 tgtctaaggtgcacca 15787100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 52658943 - 52659034
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||   ||||||||||| |||||||||| ||| ||| | |||||| ||||||    
T  52658943 attttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccgtttaccagtttagtcatttccgtttgttttt 52659034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 55953936 - 55953849
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||| ||||||||| |||| ||||| ||||||||||||||| | |||||||| | |||||||| ||||||||| || ||||||||    
T  55953936 attttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggtcctccccgttagt 55953849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 26788555 - 26788641
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||||||||||||  |||  ||||| | ||||||||| ||| |||||||||||| |||||||| ||||||||| |||||||||||    
T  26788555 ttttcactttggtcctataagtataaaatatctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgttagt 26788641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 281
Target Start/End: Complemental strand, 31712567 - 31712477
Alignment:
Q  191 ataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaa 281  Q
    ||||||||| |||||||| || ||||| |||||| |||||||||||||||||| | ||||||  |||||||| | ||| ||||||||||||    
T  31712567 ataaagtgtttcaatttgatcccataagtcttcttccgtttaccattttggtcatttccgtttatttttaaccttaaatatctaaggtgaa 31712477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 33376251 - 33376341
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| ||| || ||||||  ||||||||||||||||||||| ||||||||||||  ||||||| ||||| ||| ||||||||| |||||    
T  33376251 ttttcaatttagtgccctaattataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttagtcctctccgttaattttt 33376341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 43419447 - 43419282
Alignment:
Q  180 gtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtg 279  Q
    ||||| |||| ||||||||||||||||||||| | ||| |||||| |||||  | ||||||||||  | ||||||||||||||   |||  | |||||||    
T  43419447 gtcccttaactataaagtgtctcaatttggtcccttaactcttctgccgttacctattttggtctatttcgttagtttttaaccataaatgtataaggtg 43419348  T
Q  280 aaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    |||||   ||| || |||| |||| ||||||||| || ||||| ||||||||||| |||||| ||||    
T  43419347 aaccaacattataggtggtccaccatagatcttaatagatttt-taattttaaccctttgatctttt 43419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 36604646 - 36604586
Alignment:
Q  313 attaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgt 373  Q
    ||||| |||| |||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  36604646 attaatttttttaattttaaccatttgattttttcgttaaaagaggaccgttgaatcatgt 36604586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 40146699 - 40146616
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||  |||| ||||||||||||||||||||| ||||| |||||| ||| |||| | | ||||| |||||||||||||||    
T  40146699 tttggtcctttaactataaagtgtctcaatttggtcccataagtcttcttccgattactaatgtggtcatctccgttagttttt 40146616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 52660290 - 52660204
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaac 262  Q
    ||||||| |||||| ||||||| ||| |||| |||| |||||||||||| ||||||||||||||| || | || ||| |||||||||    
T  52660290 tttggtctcctaactataaagtatcttaattcggtcccataaatcttctgccgtttaccattttgatcatttctgtttgtttttaac 52660204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 31711126 - 31711215
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||  |||| ||||||||||||||||||||| ||||| |||| |  |||||||||||||| || | |||||| ||||||    
T  31711126 tttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgtttaccattttgatcctttccgtttgttttt 31711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 333
Target Start/End: Original strand, 44159118 - 44159281
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| || | |||| || |||||| ||||||||||  || || |||||| |||||||  ||||||||| |||||||||||||||||    |||    
T  44159118 ttttcagtttgatctcttaactattaagtgtttcaatttggttccacaactcttctgccgtttattattttggtcatctccgttagtttttaatcctaaa 44159217  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaac 333  Q
     |||||||||||| ||   ||| || |||| |||| ||||||||| || ||||| ||||||||||    
T  44159218 tatctaaggtgaaacaatattataggtggtccaccatagatcttaatagatttt-taattttaac 44159281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 38417593 - 38417672
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||||| |||| || |||||| ||||||||||| |||||||||| |  ||||||| |||| |||| |||||||||||    
T  38417593 tttggtcccttaactattaagtgtgtcaatttggtcccataaatcttatgtcgtttactatttcggtcctctccgttagt 38417672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 10403312 - 10403386
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    |||| |||||||||||||||| ||||||||||| ||||||||| | ||||||||    ||||||| |||||||||    
T  10403312 tttttactttggtcccctaactataaagtgtcttaatttggtctcgtaaatcttacgtcgtttactattttggtc 10403386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 44126628 - 44126717
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctca--atttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||| |||||||  ||||| |||||| ||||||  |||||||| | |||||||| | |||||||| |||||||||||||| ||||||    
T  44126628 attttcaatttggtcttctaactataaagagtctcacaatttggtcccttaaatcttatgccgtttactattttggtcttctctgttagt 44126717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 47667227 - 47667301
Alignment:
Q  185 ctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||||||||||||||| ||||| |||||  |||||||| | | ||||| ||| |||||||||||    
T  47667227 ctaactataaagtgtctcaatttggtctcataagtcttcctccgtttactaatatggtcctctgcgttagttttt 47667301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 12396956 - 12396915
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  12396956 tttcattttggtcccctaactataaagtgtctcaatttggtc 12396915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 40143687 - 40143751
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttac 233  Q
    |||||| ||| |||||||||| |||||||||||||||||| || ||||| |||||  ||||||||    
T  40143687 ttttcattttagtcccctaactataaagtgtctcaatttgctctcataactcttcatccgtttac 40143751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 30682753 - 30682808
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttct 224  Q
    |||||| ||||||||| |||| ||||||||||| |||||||||  |||||||||||    
T  30682753 ttttcattttggtcccttaactataaagtgtcttaatttggtcttataaatcttct 30682808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 38553969 - 38554052
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||  ||||| ||||||||||||||||||||| ||||| |||||  |||||||| | | | ||| ||||| |||||||||    
T  38553969 tttggtcttctaactataaagtgtctcaatttggtctcataagtcttcctccgtttactaatgtagtcatctccattagttttt 38554052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 39590974 - 39591009
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaa 204  Q
    ||||||||||||||||||||| ||||||||||||||    
T  39590974 ttttcactttggtcccctaactataaagtgtctcaa 39591009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 52880854 - 52880889
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    |||||||||||||| |||||||||||||||||||||    
T  52880854 tttggtcccctaactataaagtgtctcaatttggtc 52880889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 56001352 - 56001309
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||||| ||||| |||||||| |||||||||||||||||||||    
T  56001352 attttcattttggccccctaactataaagtgtctcaatttggtc 56001309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 96764 - 96722
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||||||||||||||||||| ||||||||||| || ||||||    
T  96764 ttttcactttggtcccctaactataaagtgtcttaaattggtc 96722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 307872 - 307798
Alignment:
Q  185 ctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||||||||||||| || ||||| |||||  || ||||| ||| ||||| |||||||| ||||||    
T  307872 ctaactataaagtgtctcaatttgatcccataagtcttcctccatttactattgtggtcatctccgttggttttt 307798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 526801 - 526760
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||| ||||||    
T  526801 tttcattttggtcccctaactataaagtgtctcaacttggtc 526760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 937180 - 937143
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaattt 207  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  937180 tttcattttggtcccctaactataaagtgtctcaattt 937143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 2310864 - 2310823
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| ||||| |||||||||||||||    
T  2310864 tttcattttggtcccctaactataaaatgtctcaatttggtc 2310823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 3217691 - 3217606
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||||||||||  ||||  |||||||| | |||||| || ||||||||||||   |||||| ||||||||| | |||||||||    
T  3217691 tttcactttggtcctttaactttaaagtgttttaatttgatctcataaatcttctgttgtttactattttggtcctatccgttagt 3217606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 15445470 - 15445511
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||  |||||||||||||||||||||    
T  15445470 tttcattttggtcccctaattataaagtgtctcaatttggtc 15445511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 28102154 - 28102259
Alignment:
Q  214 ataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatctta 313  Q
    |||| |||||| |||||||||||||||||| | ||||||  |||||||| | |||  ||||||||||| ||  |||| || || | ||||||| | ||||    
T  28102154 ataagtcttctgccgtttaccattttggtcatttccgtttatttttaaccttaaatgtctaaggtgaatcaactttataggtgatccaccgtaaacctta 28102253  T
Q  314 ttaaat 319  Q
    ||||||    
T  28102254 ttaaat 28102259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 48206215 - 48206283
Alignment:
Q  191 ataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||| |||||||| ||  |||| | ||||||||||||| ||||||||| | | |||||||||||    
T  48206215 ataaagtgtttcaatttgatcctataacttttctaccgtttactattttggtcatttacgttagttttt 48206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 4e-48; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 169 - 401
Target Start/End: Complemental strand, 18139570 - 18139337
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||| | || ||||||| |||||||   |||||||| ||||| ||||||||||||||||||    
T  18139570 ttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgtttattgttttggtcctctccattagtttttaacatcaaa 18139471  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacc-atttgattttttctttaaatgaggaccgttgaa 367  Q
      ||||||||||||||| |||||||||| | |||| ||||  ||||||||||||  ||||||||||  |||||||||||||||||| |||||  |||| |    
T  18139470 tgtctaaggtgaaccatgtttaaagatgatccaccatagacattattaaatttttaaattttaacctttttgattttttctttaaaagaggattgttgga 18139371  T
Q  368 ttatgtagagtctattttactttactgtgaacca 401  Q
    | |||||| ||||||| || ||||||||||||||    
T  18139370 tcatgtagggtctattgtattttactgtgaacca 18139337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 332 - 441
Target Start/End: Complemental strand, 34084154 - 34084045
Alignment:
Q  332 accatttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaatacttttctcattttcttc 431  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  34084154 accatttgattttttctttaaatgaggaccgttgaattatgtagggtctattgtactttactgtgaaccactaacacctaatacttttatcattttcttc 34084055  T
Q  432 atcttcatct 441  Q
    ||||||||||    
T  34084054 atcttcatct 34084045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 169 - 383
Target Start/End: Complemental strand, 33802100 - 33801886
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||||||||||| ||||||||||| |||||| || ||||||||||||   ||||||| | |||||| ||||||||||||||||||||||||    
T  33802100 ttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagtttaccgtattggtcctctccgttagtttttaacatcaaa 33802001  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttga-ttttttctttaaatgaggaccgttgaa 367  Q
     |||||||||  |||||  || ||| |||| |||| || | |||||||||||||  |||||||| | ||||| ||||||||||||| |||||  |||| |    
T  33802000 tatctaaggtagaccatgattcaaggtggtccaccatataccttattaaatttttaaattttaa-cttttgatttttttctttaaaagaggattgttgga 33801902  T
Q  368 ttatgtagagtctatt 383  Q
    | |||||| |||||||    
T  33801901 tcatgtagggtctatt 33801886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 31738396 - 31738580
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||| ||||||||| ||||||||||| ||||| |||||| | |||||||||||||||| |||||||||||||||||| | |||    
T  31738396 ttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcctctccgttagtttttaaccttaaa 31738495  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaa 353  Q
      ||||| ||||||||  |||| ||| ||| |||| ||||| |||||||||     | ||||||||||||||| |||| ||||||    
T  31738496 tgtctaatgtgaaccaactttatagacggtccaccatagattttattaaatcacaaatttttaaccatttgatattttttttaaa 31738580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 22299986 - 22299896
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||| |||||    
T  22299986 ttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgttatttttt 22299896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 169 - 355
Target Start/End: Complemental strand, 293723 - 293538
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| || |||||  ||||||||| ||||||||||| ||||| ||||||  ||||||||||||||||| ||||||||  |||||||| | |||    
T  293723 ttttcaatttgatctcctaattataaagtgtttcaatttggtctcataagtcttctgtcgtttaccattttggtcctctccgtttatttttaaccttaaa 293624  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatg 355  Q
      ||||||||||||||  |||| || |||| |||| |||| ||||||||||    || ||||||||||||||| |||| ||||||||    
T  293623 tgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaataacatatttttaaccatttgatctttt-tttaaatg 293538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 8412399 - 8412313
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| ||| |||||||||| ||||||||||||||||||||| |||||||||| | |||||||| ||||||||| |||||||||||    
T  8412399 ttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtcctctccgttagt 8412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 356
Target Start/End: Complemental strand, 27440257 - 27440071
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||| |||| ||||  |||| ||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||| |||||||| | |||     
T  27440257 tttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaatttttaactttaaat 27440158  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatga 356  Q
     |||||||||||  |  |||  || ||||  ||| || |  |||||||||||| ||||||||||| |||||| |||| || ||||||    
T  27440157 gtctaaggtgaattaactttgtaggtggtctaccataaactttattaaattttttaattttaaccgtttgatctttttttaaaatga 27440071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 31740355 - 31740265
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| ||||||||| |||| ||||||||||||||||||||| |||||||||| | |||||||||||||||||| | |||||| ||||||    
T  31740355 ttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcctatccgtttgttttt 31740265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 284
Target Start/End: Original strand, 9927646 - 9927753
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |||| | ||||||| ||||||||| ||||||||| |||||||| | |||  |||||    
T  9927646 tttggtcccctaactataaagtgtctcaatttggtcccataaa-cttcaatcgtttactattttggtcatctccgttaatttttaaccttaaatgtctaa 9927744  T
Q  276 ggtgaacca 284  Q
    | |||||||    
T  9927745 gatgaacca 9927753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 33807722 - 33807812
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||||| |||| |||||||||||||||||| |  ||||||| |||| ||||||||| |||||||| ||||||||| |||||    
T  33807722 ttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctgccgtttaccgttttggtcctctccgttaattttt 33807812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 230 - 346
Target Start/End: Original strand, 2130877 - 2130993
Alignment:
Q  230 ttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattt 329  Q
    |||| ||||||||| ||||| ||||| |||||| | ||| |||||||||||||||  |||| || ||||||||| ||||||| || ||  |||||||||     
T  2130877 ttactattttggtcctctcccttagtatttaaccttaaatatctaaggtgaaccacctttataggtggttcaccatagatctcataaatctttctaattc 2130976  T
Q  330 taaccatttgatttttt 346  Q
    |||||||||||||||||    
T  2130977 taaccatttgatttttt 2130993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 8411119 - 8411203
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||| ||| |||||||||| |||||||||||||||||||||  ||||||||| | |||||||| ||||||||| |||||||||    
T  8411119 ttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgtttactattttggtcctctccgtta 8411203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 14328850 - 14328707
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    |||| |||| |||| || |||||||| ||||||||| ||||| |||| |  ||||||| ||||||||| ||||||||| |||||||| | |||  |||||    
T  14328850 tttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaa 14328751  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaat 319  Q
    |||||||||  |||| || |||| |||| |||| ||||||||||    
T  14328750 ggtgaaccaactttataggtggtccaccatagaccttattaaat 14328707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 14421860 - 14421717
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    |||| |||| |||| || |||||||| ||||||||| ||||| |||| |  ||||||| ||||||||| ||||||||| |||||||| | |||  |||||    
T  14421860 tttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaa 14421761  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaat 319  Q
    |||||||||  |||| || |||| |||| |||| ||||||||||    
T  14421760 ggtgaaccaactttataggtggtccaccatagaccttattaaat 14421717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 27438824 - 27438913
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||  |||| |||||||||||||||||| || ||||||| |||| ||||||||  |||||||| ||||||||| |||||    
T  27438824 tttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtcatctccgttaattttt 27438913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 5311312 - 5311386
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    |||||| ||| |||||||||| |||||||||||||||||||||  ||||||||| |  ||||||| |||||||||    
T  5311312 ttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcgtttactattttggtc 5311386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 34084215 - 34084148
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattt 238  Q
    |||||||||||||||  |||  ||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  34084215 ttttcactttggtcc--taaatataaagtgtctcaatttggtctcataaatcttctgtcgtttaccattt 34084148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 353
Target Start/End: Complemental strand, 13507178 - 13507071
Alignment:
Q  245 tctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttt 344  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||||| |||| || | | |   ||| ||||   ||||||||||||| |||||||||    
T  13507178 tctctgttagtttttaacatcaaatgtttaaggtgaaccatatttaaaggtggtcca-catgggctttaataaaacctctaattttaaccctttgatttt 13507080  T
Q  345 ttctttaaa 353  Q
    |||||||||    
T  13507079 ttctttaaa 13507071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 22298637 - 22298747
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||| ||||   |||||||||||| |||| || ||||| | |||| |||||||  ||||||||||  |||||||||||||||| | |||    
T  22298637 ttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtctcttccgttagtttttaaccttaaa 22298736  T
Q  269 aatctaaggtg 279  Q
      |||||||||    
T  22298737 tgtctaaggtg 22298747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 8447255 - 8447296
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  8447255 tttcattttggtcccctaactataaagtgtctcaatttggtc 8447296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 8456059 - 8456100
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  8456059 tttcattttggtcccctaactataaagtgtctcaatttggtc 8456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 19367751 - 19367792
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  19367751 tttcattttggtcccctaactataaagtgtctcaatttggtc 19367792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 28225458 - 28225499
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  28225458 tttcattttggtcccctaactataaagtgtctcaatttggtc 28225499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 7312237 - 7312187
Alignment:
Q  295 tggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||| ||||    
T  7312237 tggttcaccgtagatcttatt-aattttttaatttcaaccatttgatctttt 7312187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 13173077 - 13173112
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    |||||||||||||| |||||||||||||||||||||    
T  13173077 tttggtcccctaactataaagtgtctcaatttggtc 13173112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 353
Target Start/End: Original strand, 11722940 - 11723006
Alignment:
Q  287 tttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaa 353  Q
    |||||| ||||| |||| |||||| |||||| | ||||||||| |||| ||||||||||| ||||||    
T  11722940 tttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgattttttttttaaa 11723006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 26584113 - 26584079
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  26584113 tttggtcccctaactataaagtgtctcaatttggt 26584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 28226500 - 28226462
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttg 208  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  28226500 tttcattttggtcccctaactataaagtgtctcaatttg 28226462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 16268716 - 16268761
Alignment:
Q  311 ttattaaattttctaattttaaccatttgattttttctttaaatga 356  Q
    |||||||||||| |||||||| || ||||||||||||||| |||||    
T  16268716 ttattaaattttttaattttatccgtttgattttttctttgaatga 16268761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 19368600 - 19368559
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||| ||||| |||||||||||||||||||||    
T  19368600 tttcattttggtcctctaactataaagtgtctcaatttggtc 19368559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 170 - 442
Target Start/End: Complemental strand, 56782 - 56507
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    |||||||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||  ||| | || ||||  ||||||||||||||||||     
T  56782 tttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgtttactgtttagatcctctctattagtttttaacatcaaat 56683  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatt-ttttctttaaatgaggaccgttgaat 368  Q
    ||||||||  ||| || |||||||||||| ||||  ||| |||||||||||||  |||||||||| ||||||| ||||||||||| || ||  |||| ||    
T  56682 atctaagggaaactatgtttaaagatggtccaccaaagaccttattaaatttttaaattttaaccttttgatttttttctttaaaagatgattgttggat 56583  T
Q  369 tatgtagag-tctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatcttcatctc 442  Q
     | |||| | |||||| || |||| ||| |||||| ||||||||||| ||||||||  ||||||||||||| ||||    
T  56582 cacgtagtgttctattgtattttattgtaaaccaccaacacctaatatttttctcacctttcttcatcttcttctc 56507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 54646 - 54714
Alignment:
Q  191 ataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||||||||||||| |||||||||||  | |||||||| | ||||| |||||||||||||||    
T  54646 ataaagtgtctcaatttggtcccataaatcttcctctgtttaccaatgtggtcctctccgttagttttt 54714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 205 - 412
Target Start/End: Original strand, 40977 - 41184
Alignment:
Q  205 tttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccg 304  Q
    ||||||| ||||| ||||||  |||||||  |||| ||  |||| |||||||||||||||||||  ||||||||||||||||||||||| |||| ||||     
T  40977 tttggtctcataagtcttctgtcgtttactgttttagttctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccacca 41076  T
Q  305 tagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccacta 404  Q
    ||   |||| |||||||| | ||||||||||||||||||||| |||||| ||  |||||||||| ||||||  | |||| ||||||||||||||||||||    
T  41077 tatgccttactaaatttttttattttaaccatttgattttttttttaaaagataaccgttgaatcatgtaggatttattgtactttactgtgaaccacta 41176  T
Q  405 acacctaa 412  Q
    ||||||||    
T  41177 acacctaa 41184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 236 - 407
Target Start/End: Complemental strand, 207814 - 207643
Alignment:
Q  236 ttttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 335  Q
    |||||||| ||||||||||||||||||||||||  ||| ||||||||||| ||||||| |||| |||| ||   |||| |||||||| ||||||||||||    
T  207814 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaaattttttaattttaacca 207715  T
Q  336 tttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaaca 407  Q
    ||||||||||||||||||  | |||| |||||| | || ||||||||| |||||||||||||||||||||||    
T  207714 tttgattttttctttaaaacaagaccattgaatcaagttgagtctattgtactttactgtgaaccactaaca 207643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 423
Target Start/End: Complemental strand, 14109153 - 14108900
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||||||||||||| |||| ||||| ||||||||  ||||| |||   |||| | ||||||||| |||| ||| |||||||||||||||||||||||    
T  14109153 attttcactttggtcccttaactataaaatgtctcaaactggtcccatg--tcttttgccgtttaccgttttagtcctctccgttagtttttaacatcaa 14109056  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaa 367  Q
    |  ||||||||||||||| ||||||| |||| |||| |||| ||||||||| |||  |||||||||| ||| |||||||||||||| |||||  |||| |    
T  14109055 atgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaaattttaaattttaaccttttaattttttctttaaaagaggattgttgga 14108956  T
Q  368 ttatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca 423  Q
    | ||||||  |||||| || |||| ||| ||| || |||||  |||| ||||||||    
T  14108955 tcatgtaggatctattatattttattgtaaacaaccaacactaaatatttttctca 14108900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 423
Target Start/End: Complemental strand, 14419110 - 14418857
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||||||||||||| |||| ||||| ||||||||  ||||| |||   |||| | ||||||||| |||| ||| |||||||||||||||||||||||    
T  14419110 attttcactttggtcccttaactataaaatgtctcaaactggtcccatg--tcttttgccgtttaccgttttagtcctctccgttagtttttaacatcaa 14419013  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaa 367  Q
    |  ||||||||||||||| ||||||| |||| |||| |||| ||||||||| |||  |||||||||| ||| |||||||||||||| |||||  |||| |    
T  14419012 atgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaaattttaaattttaaccttttaattttttctttaaaagaggattgttgga 14418913  T
Q  368 ttatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca 423  Q
    | ||||||  |||||| || |||| ||| ||| || |||||  |||| ||||||||    
T  14418912 tcatgtaggatctattatattttattgtaaacaaccaacactaaatatttttctca 14418857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 237 - 414
Target Start/End: Complemental strand, 24495066 - 24494887
Alignment:
Q  237 tttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccat 336  Q
    ||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||  |||| |||| ||   |||||||| |||| |||||||||||||    
T  24495066 tttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccaccatatgccttattaatttttttaattttaaccat 24494967  T
Q  337 ttgatttttt--ctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacctaata 414  Q
    ||||||||||  ||||||| ||  |||||||||| |||| | ||||||| ||||||||||||||||||| ||||||||||    
T  24494966 ttgatttttttcctttaaaagataaccgttgaatcatgtggcgtctattgtactttactgtgaaccactcacacctaata 24494887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 38406051 - 38406319
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||||||||| ||||||||||||||  ||||  ||||||||||||  |||||||  |||||||| | ||||||| ||||||||||||||    
T  38406051 ttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgtttactgttttggtcctttccgttaatttttaacatcaaa 38406150  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      ||||||||||||||||||||||| | || || | |||| |||||||||||||  ||||| |||| ||| ||||||| |||||| |||||  |||| ||    
T  38406151 tgtctaaggtgaaccatatttaaaggtagtcca-catagaccttattaaatttttaaatttcaaccttttaattttttgtttaaaagaggattgttggat 38406249  T
Q  369 tatgtagagtctattttactttactgtgaaccactaacacctaatacttttctca-ttttcttcatcttc 437  Q
     || || |||||||| || |||| ||| |||||   ||||| |||| ||| ||||  |||||||||||||    
T  38406250 catttaaagtctattgtattttattgtaaaccatccacaccaaatattttcctcacctttcttcatcttc 38406319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 168 - 413
Target Start/End: Complemental strand, 46458797 - 46458549
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| ||||||||| | ||    
T  46458797 attttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtttgtttttaaccttaa 46458698  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttga--ttttttctttaaatgaggaccgttg 365  Q
    |  ||||||||||||||  |||| || | || |||| |||| ||||||||||    || |||||||| |||||  ||||||  ||||||| ||| |||||    
T  46458697 atgtctaaggtgaaccaactttataggtagtccaccatagaccttattaaatcacatagttttaaccgtttgatctttttttgttaaatgtggatcgttg 46458598  T
Q  366 aattatgtagag-tctattttactttactgtgaaccactaacacctaat 413  Q
     || ||| |||| |||||| ||| |||   |||||||| ||||||||||    
T  46458597 gatcatgaagagatctattgtaccttataatgaaccacaaacacctaat 46458549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 181 - 423
Target Start/End: Original strand, 4167496 - 4167738
Alignment:
Q  181 tcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtga 280  Q
    |||| |||| || |||||| |||||||| ||  |||| ||||||  |||||||  |||| ||| | || || | ||||||||||||||  ||||||||||    
T  4167496 tcccttaactattaagtgtgtcaatttgatcctataagtcttctgtcgtttactgttttagtcatttctgtcaatttttaacatcaaatttctaaggtga 4167595  T
Q  281 accatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagagtct 380  Q
    ||||| ||||||| |||| |||| ||||||||||||||||||  ||||| |||| |||||||||||||||||| ||||   |||| || |||||| ||||    
T  4167596 accatgtttaaaggtggtccaccatagatcttattaaatttttaaatttcaaccttttgattttttctttaaaagaggtttgttggatgatgtagggtct 4167695  T
Q  381 attttactttactgtgaaccactaacacctaatacttttctca 423  Q
     || || |||| ||| ||||||  |||||||||| ||||||||    
T  4167696 gttgtattttattgtaaaccaccgacacctaatatttttctca 4167738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 4857234 - 4857347
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||||||||||| ||||| |||||| |||||||| || ||||||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  4857234 ttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttactgttttagtcctctccgttagtttttaacatcaaa 4857333  T
Q  269 aatctaaggtgaac 282  Q
      ||||||||||||    
T  4857334 tgtctaaggtgaac 4857347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 170 - 423
Target Start/End: Original strand, 18801249 - 18801502
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||||| | |  | ||||||||   || || | || |||| ||||||||| ||||     
T  18801249 tttcattttggtcccctaactataaagtgtctcaatttggtcccataaatatacctctgtttaccaaaatgatcctttctgttaatttttaacagcaaat 18801348  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaatt 369  Q
     ||||||||||||||||||| ||| || | |||| | || |||| ||||   | ||||| ||||| ||| ||||||| |||||| |||||  |||| ||     
T  18801349 ctctaaggtgaaccatatttcaaggtgatccaccatggaccttagtaaaaaatttaattgtaaccctttaattttttgtttaaaagaggattgttggatc 18801448  T
Q  370 atgtagagtctattttactttactgtgaaccactaacacctaatacttttctca 423  Q
    |||||||||||||| || |||| ||||  ||  |||||||||||| ||||||||    
T  18801449 atgtagagtctattgtattttattgtgtgcctataacacctaatatttttctca 18801502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 170 - 423
Target Start/End: Complemental strand, 19848916 - 19848663
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| ||||||| | |  |||||||||    || || | || |||| ||||||||| ||||     
T  19848916 tttcattttggtcccttaactataaagtgtctcaatttggtcccataaatatacctccgtttacccaggtgatcctttctgttaatttttaacagcaaat 19848817  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaatt 369  Q
     ||||||||||||||||||| ||| || | |||| | || |||| ||||   | ||||| ||||| ||||||||||| |||||| |||||  |||| ||     
T  19848816 ctctaaggtgaaccatatttcaaggtgatccaccatggaccttagtaaaaaatttaattgtaaccctttgattttttgtttaaaagaggattgttggatc 19848717  T
Q  370 atgtagagtctattttactttactgtgaaccactaacacctaatacttttctca 423  Q
    |||||||||||||| || |||||||||  ||  | |||||||||| ||||||||    
T  19848716 atgtagagtctattgtattttactgtgtgcctatgacacctaatatttttctca 19848663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 40926602 - 40926518
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||||||||| |||||||| |||||||||    
T  40926602 ttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttctaccgtttaccgttttggtcctctccgtta 40926518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 169 - 285
Target Start/End: Original strand, 40930451 - 40930567
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| |   ||||||| |||| ||| ||||  ||||||||||||||||||    
T  40930451 ttttcactttggtcccctaactataaagtgtttcaatttggtcccataaatcttttgatgtttaccgttttagtcctctctattagtttttaacatcaaa 40930550  T
Q  269 aatctaaggtgaaccat 285  Q
     |||||||||| |||||    
T  40930551 tatctaaggtggaccat 40930567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 25153690 - 25153773
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgt 251  Q
    ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| |||||    
T  25153690 attttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccgttttggtcttgtccgt 25153773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 169 - 365
Target Start/End: Complemental strand, 25155019 - 25154820
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| |||| |||| |||||||||||||||||  || |||||||||||| | ||||| |||||||||| |||||||| ||||||||| | |||    
T  25155019 ttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttatcattttggtcatctccgtttgtttttaaccttaaa 25154920  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttga---ttttttctttaaatgaggaccgttg 365  Q
      ||||||||||||||  |||| |  |||| |||| || | |||||||||| || || |||||||| |||||   |||||| || |||||| ||||||||    
T  25154919 tgtctaaggtgaaccaactttataagtggtccaccataaaacttattaaatcttttatttttaaccgtttgatcgtttttttttaaaatgaagaccgttg 25154820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 169 - 346
Target Start/End: Original strand, 26406158 - 26406335
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||| |||| |||| |||||||||||||||||| || ||||| |||||| ||||||| |||||||||| ||||||||| |||||||| | |||    
T  26406158 ttttcaatttgatcccataacgataaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttattttttaaccttaaa 26406257  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
      ||||||||||||||  |||  || |||| |||| ||||| |||| || |  | ||||||||||| |||||| ||||    
T  26406258 tgtctaaggtgaaccaactttgtaggtggtccaccatagatattataaattcatttaattttaaccctttgatatttt 26406335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 169 - 354
Target Start/End: Complemental strand, 33459626 - 33459441
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||| ||||| ||||||||||||||||||||| ||||| |||||  |||||||| | | ||||||| || ||||||||||||| | ||     
T  33459626 ttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtggtcttttctgttagtttttaaccttaac 33459527  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaat 354  Q
      ||||||||||||||  |||  || ||||  ||| | ||  |||||||| ||| ||||||||||| |||||| |||| |||||||    
T  33459526 tgtctaaggtgaaccaactttgtaggtggtctaccatggactttattaaaatttgtaattttaaccgtttgatattttttttaaat 33459441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 19279695 - 19279609
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| || |  ||||||| ||||||||| | |||||||||    
T  19279695 ttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtcgtttactattttggtcctttccgttagt 19279609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 22061878 - 22061792
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||||||||| |||||  |||||||||||||| |||||||||| | |||||||| ||||| |||||||||||||||    
T  22061878 ttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtttactattttagtcttctccgttagt 22061792  T

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Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 22746403 - 22746317
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| ||| |||||||||| ||||||||||||||||||||| |||||||||| | |||||||| |||||| || |||||||||||    
T  22746403 ttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttgatcctctccgttagt 22746317  T

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Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 24873680 - 24873590
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||| | ||||||| ||||||||||||||||||||| ||||| |||||| |||||||||||||||||| | |||||| ||||||    
T  24873680 ttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtttgttttt 24873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 22744778 - 22744863
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    ||||||| ||| |||||||||| ||||||||| |||||||||||  ||||||||| | |||||||| |||||||||||||||||||    
T  22744778 attttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgccgtttactattttggtcttctccgtta 22744863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 27899290 - 27899182
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||  |||| ||||| | |||||||||| || |||||||||| |  ||||||| ||||||||||| |||||||||||||||| | ||| ||||||    
T  27899290 tttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtttactattttggtcttatccgttagtttttaaccttaaatatctaa 27899191  T
Q  276 ggtgaacca 284  Q
    |||||||||    
T  27899190 ggtgaacca 27899182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 168 - 288
Target Start/End: Original strand, 43930351 - 43930471
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    |||||||||||||||||||||| || ||  ||||||||||||||  |||||||||||  ||||||| ||||||||| |||| |||| |||||||| | ||    
T  43930351 attttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtttactattttggtcctctctgttaatttttaaccttaa 43930450  T
Q  268 aaatctaaggtgaaccatatt 288  Q
    |  ||||||||| || |||||    
T  43930451 atgtctaaggtggactatatt 43930471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 47163193 - 47163276
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||| ||||| |||||||| || ||||||||| |||||||||| | |||||||| ||||||||| |||||||||||||||    
T  47163193 tttggtcctctaactataaagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgttagttttt 47163276  T

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Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 14206706 - 14206796
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||| |||||| ||||| ||| |||||||||||  |||||||||||  ||||||| |||||| || |||||||||||||||    
T  14206706 ttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttt 14206796  T

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Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 14215396 - 14215486
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||| |||||| ||||| ||| |||||||||||  |||||||||||  ||||||| |||||| || |||||||||||||||    
T  14215396 ttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttt 14215486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 412
Target Start/End: Complemental strand, 35315179 - 35315077
Alignment:
Q  310 cttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaaccactaacacc 409  Q
    |||| |||||||| | ||||||||||||| |||||||||||||| ||  |  ||||||| |||||| |||| || ||||||||||||||| |||||||||    
T  35315179 cttactaaatttttttattttaaccattttattttttctttaaaagataattgttgaatcatgtagggtcttttgtactttactgtgaactactaacacc 35315080  T
Q  410 taa 412  Q
    |||    
T  35315079 taa 35315077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 346
Target Start/End: Original strand, 45719647 - 45719825
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaa 267  Q
    ||||||| |||| ||||||||| ||||||||||| ||||||||| ||||| ||||||   ||||||||||||||| || | ||| |||||||||||  ||    
T  45719647 attttcagtttgatcccctaactataaagtgtctaaatttggtctcataactcttctgttgtttaccattttggtttttttcgtcagtttttaacactaa 45719746  T
Q  268 aaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
    |  ||||||||| ||||   ||| || || | |||| || | |||| ||| |||| |||||||||||| ||||| ||||    
T  45719747 atgtctaaggtggaccaacattataggtgctccaccataaaccttactaagttttttaattttaaccaattgatatttt 45719825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 46457103 - 46457177
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    |||||| |||| |||| |||| ||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  46457103 ttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatcttcttccatttaccattttggtc 46457177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 43935219 - 43935288
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccatttt 239  Q
    ||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| |||||    
T  43935219 tttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctgccgtttactatttt 43935288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 43936222 - 43936133
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| |||||||| ||||| ||||||| ||| ||||||||| ||||| ||||||  ||||||| ||||||||| |||||||||||||||    
T  43936222 tttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtcgtttactattttggtcctctccgttagttttt 43936133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 356
Target Start/End: Complemental strand, 132075 - 131895
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||| |||| || |||||| || |||||||| ||||| |||||  |||||||| | | || || |||||||||||||||||| | |||  |||||    
T  132075 tttggtcccttaactattaagtgtgtcgatttggtcccataagtcttcctccgtttactaatgtgatcatctccgttagtttttaaccttaaatgtctaa 131976  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatga 356  Q
    |||||||||  |||  |  |||   ||| || |  |||||||||||| ||||||||||| |||||| ||||||||||||||    
T  131975 ggtgaaccaactttgtaagtggactaccataaactttattaaattttttaattttaaccgtttgatcttttctttaaatga 131895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 19278387 - 19278471
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttag 254  Q
    ||||| ||||||||| |||  ||||||||||||||||||||| ||||| |||||| |||||||| ||||||||| ||| ||||||    
T  19278387 tttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctcttcgttag 19278471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 46675017 - 46674933
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||| |||| |||| |||| |||||||||||| |||||||| |||||||||| | |||||||| ||||||||| |||||||||    
T  46675017 ttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtttactattttggtcctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 13446741 - 13446651
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||||||| |   ||| ||| ||||||||||||||||| |||||||||||| |||||||  || |||||| |||||||||||||||    
T  13446741 ttttcactttggttcttcaactatatagtgtctcaatttggtcccataaatcttctgccgtttattatattggtcctctccgttagttttt 13446651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 43006418 - 43006504
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||||||||| || |||||||||||||||||| | ||| |||| | |||||| | ||||||||| |||||||||||    
T  43006418 ttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtcttatgccgtttgctattttggtcatctccgttagt 43006504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 46673523 - 46673608
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||||||||||||||||||| ||||||||||| |||||||||| |  ||||||| || |||||| ||||| |||||    
T  46673523 ttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataaatcttat-gcgtttactatgttggtcctctccattagt 46673608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 4858427 - 4858372
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttct 224  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||    
T  4858427 ttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttct 4858372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 22060503 - 22060582
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||||| ||||| ||||||||||||||||||||  || || |||| | |||||||| ||||||||| |||||||||||    
T  22060503 tttggtcctctaactataaagtgtctcaatttggttccacaagtcttatgccgtttactattttggtcatctccgttagt 22060582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 43007733 - 43007646
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||| ||||| |||| |  ||||||| ||||| ||  |||||||||||    
T  43007733 attttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttactattttagttctctccgttagt 43007646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 14107865 - 14107955
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| ||||||||| |||| ||||||||||||||  ||||| | || |||||||  |||| ||| |||||||| |||||||||||||||    
T  14107865 ttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttggtcctctccgttagttttt 14107955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 14417822 - 14417912
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| ||||||||| |||| ||||||||||||||  ||||| | || |||||||  |||| ||| |||||||| |||||||||||||||    
T  14417822 ttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttggtcctctccgttagttttt 14417912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 45721849 - 45721759
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||| ||||||||||||||||||||  ||||| | |||  |||||||| | | || || |||||||||||||||    
T  45721849 ttttcattttggtcccctaactataaagtgtctcaatttggttccataagttttcctccgtttactaatgtgatcctctccgttagttttt 45721759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 333
Target Start/End: Original strand, 10256163 - 10256320
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||| |||| || |||||||||||  ||||| ||||| ||||||| ||||||  ||||||||| | ||   || |||||||| | |||| |||||    
T  10256163 tttggtcccttaactattaagtgtctcaaaatggtctcataactcttctatcgtttagtattttggtcatttctagtaatttttaaccttaaaagtctaa 10256262  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaac 333  Q
    |||||||||  |||| || | || |||| |||| |||||||||| || || |||||||    
T  10256263 ggtgaaccaactttataggtagtccaccatagaccttattaaatcttttatttttaac 10256320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 17288296 - 17288249
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttc 223  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  17288296 tttggtcccctaactataaagtgtctcaatttggtcccataagtcttc 17288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 368
Target Start/End: Original strand, 24872024 - 24872222
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||| |||||||| ||||| ||||| | |||| |||||||| ||||| |||| | ||||||||||||||| || | |||||| ||||||||| | |||    
T  24872024 ttttcattttggtccactaactataaa-tatctctatttggtctcataagtctttttccgtttaccattttgatcctttccgtttgtttttaaccttaaa 24872122  T
Q  269 aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaat 368  Q
      |||| |||||| ||  |||| ||||| | |||| || | || ||||| | ||  | |||||||| |||||| |||| | ||||||  |||||||||||    
T  24872123 tgtctatggtgaatcaactttatagatgatccaccataaacctcattaagtctttcatttttaaccttttgatcttttttataaatggagaccgttgaat 24872222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 28326466 - 28326383
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||| ||| || ||||||||||||||||||||   |||| |||||  |||||||| ||| ||||| |||||||||||||||    
T  28326466 tttggtctcctgactataaagtgtctcaatttggttctataagtcttcctccgtttactattgtggtcctctccgttagttttt 28326383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 351
Target Start/End: Complemental strand, 35484386 - 35484212
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaa 275  Q
    ||||||||  |||| ||||||| | ||||||| ||| ||||| |||||| || ||  | |||||||||  || ||||||||||||||   |||  |||||    
T  35484386 tttggtcctttaactataaagtatttcaatttagtcccataactcttctgccattacctattttggtccacttcgttagtttttaaccctaaatgtctaa 35484287  T
Q  276 ggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttcttta 351  Q
    |||||||||   ||| || |||| |||| ||||||||| || ||||| ||||||||||| |||||| |||| ||||    
T  35484286 ggtgaaccaacattataggtggtccaccatagatcttaatagatttt-taattttaaccctttgatcttttgttta 35484212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 36703032 - 36702949
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    ||||| ||| |||||||||   |||| ||||||||||||||| ||||||| |||| |||||||| ||||||||| | |||||||    
T  36703032 tttcattttagtcccctaaatttaaactgtctcaatttggtcccataaatattctgccgtttactattttggtcctttccgtta 36702949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 18802472 - 18802402
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccatttt 239  Q
    |||||| |||| ||||||||| ||||||||||||||||| ||| ||||||| ||||| |||| || |||||    
T  18802472 ttttcattttgatcccctaactataaagtgtctcaatttagtcccataaattttctatcgttcactatttt 18802402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 36702811 - 36702881
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttg 240  Q
    ||||| ||||||||| ||||  |||| ||||||||||||||| ||||||| |||| |||||||| ||||||    
T  36702811 tttcattttggtcccttaactttaaactgtctcaatttggtcccataaatattctgccgtttactattttg 36702881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 35127850 - 35127927
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    |||||| | ||||| ||||| ||||||||||| ||| |||||||||| | |||||||| ||||||||| ||| |||||    
T  35127850 tttggttctctaactataaaatgtctcaattttgtcccataaatcttatgccgtttactattttggtcatcttcgtta 35127927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 41126273 - 41126314
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  41126273 tttcattttggtcccctaactataaagtgtctcaatttggtc 41126314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 41516420 - 41516335
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaa 261  Q
    |||||||||||||| ||||||||||| ||||||||| ||||| | |||| |||||||  | | ||||| | || ||||||||||||    
T  41516420 tttggtcccctaactataaagtgtcttaatttggtcccataagtattcttccgtttagtaatgtggtcatttctgttagtttttaa 41516335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 41616658 - 41616699
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  41616658 tttcattttggtcccctaactataaagtgtctcaatttggtc 41616699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 7347281 - 7347213
Alignment:
Q  191 ataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||||||||||  ||||||||| |  |||||||||||||  || |||||||||| ||||    
T  7347281 ataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttaatcctctccgttagatttt 7347213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 33458343 - 33458430
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    |||||| ||||||||  |||| |||||||||||||| || ||| ||||| |||||| |||||||| | | ||||| |||||||||||||    
T  33458343 ttttcattttggtcctttaactataaagtgtctcaa-ttagtcccataagtcttcttccgtttactaatgtggtcctctccgttagttt 33458430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 30224058 - 30223971
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||||||||||||| ||||| ||||||||||||||| | ||  |||||| |||||     |||||||| |||||||||||||    
T  30224058 tttcattttggtcccctaactataaattgtctcaatttggtcccttatgtcttctgccgttacatcttttggtcctctccgttagttt 30223971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 34557437 - 34557472
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    |||||||||||||| |||||||||||||||||||||    
T  34557437 tttggtcccctaactataaagtgtctcaatttggtc 34557472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 35315273 - 35315206
Alignment:
Q  201 tcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    ||||||||||| ||||| ||||||  |||||||  |||| ||| |||| |||||||||||||||||||    
T  35315273 tcaatttggtcccataagtcttctgtcgtttactgttttagtcctctctgttagtttttaacatcaaa 35315206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 38408358 - 38408315
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||    
T  38408358 attttcactttggtcctctaactataaagtgtctcaaattggtc 38408315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 43931950 - 43931859
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||| |||||| ||||| || ||  || ||||||||||| |||||| |||||  | ||||| |||||||||  ||||||||||||||    
T  43931950 attttcactctggtcctctaactattaaacgtatcaatttggtcccataaaccttctgtcatttactattttggtcccctccgttagttttt 43931859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 48754036 - 48754119
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||||||| |||  ||||||||| ||||||| |||  ||||||||| |  ||||||||||||| ||| |||||||||| ||||    
T  48754036 tttggtcccataattataaagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgttagatttt 48754119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 7146813 - 7146855
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    |||||| |||||||||||||| ||||||||| |||||||||||    
T  7146813 ttttcaatttggtcccctaactataaagtgtttcaatttggtc 7146855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 7148141 - 7148055
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| |||||||  ||||| ||||||||| ||||||||||| | |||||||| |  |||||||  |||||||  |||||||||||    
T  7148141 ttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggttctctccgttagt 7148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 437
Target Start/End: Original strand, 22537727 - 22537860
Alignment:
Q  300 caccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgaggaccgttgaattatgtagagtctattttactttactgtgaac 399  Q
    |||| |||||| |||||| | || |||||| |||| ||||||||||  |||||| | | ||| ||| |||||| || ||||||||||  ||||  |||||    
T  22537727 caccatagatcctattaattattttaatttaaaccgtttgattttt--tttaaaagggaaccattggattatgcag-gtctattttatcttacgatgaac 22537823  T
Q  400 cactaacacctaatacttttctcattttcttcatcttc 437  Q
    ||| ||||||||||  |||| |||||||||||||||||    
T  22537824 caccaacacctaat-tttttttcattttcttcatcttc 22537860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 34558383 - 34558342
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| ||||||| |||||||||||||    
T  34558383 tttcattttggtcccctaactataaagtatctcaatttggtc 34558342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 38002596 - 38002555
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| ||||||||| |||| |||||||||||||||||||||    
T  38002596 tttcattttggtcccttaactataaagtgtctcaatttggtc 38002555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 41127253 - 41127212
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| ||||||| |||||||||||||    
T  41127253 tttcattttggtcccctaactataaagtatctcaatttggtc 41127212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 25532179 - 25532231
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatctt 222  Q
    ||||| |||||||||||||| ||||||||| || |||| ||| ||||||||||    
T  25532179 tttcaatttggtcccctaactataaagtgtttcgatttagtctcataaatctt 25532231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 169 - 346
Target Start/End: Complemental strand, 77264 - 77085
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaa 268  Q
    |||||||||||||| |||||| |||||| || ||||||||||| ||||||| |||||||||||||  |||||||||||||||||| | ||| ||||||||    
T  77264 ttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactgttttggtcttctccgttaatgtttgacatcaaa 77165  T
Q  269 --aatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 346  Q
        ||||||||||||||||||||||| |||| |||| | || ||||| |  |  | |||||||||||||||||| ||||    
T  77164 tgtgtctaaggtgaaccatatttaaaggtggtccaccattgaccttataagttcatttaattttaaccatttgatatttt 77085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 356
Target Start/End: Original strand, 47104 - 47290
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||| |||| ||||  |||| ||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||| |||||||| | |||     
T  47104 tttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaatttttaactttaaat 47203  T
Q  270 atctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttctttaaatga 356  Q
     |||||||||||  |  |||  || ||||  ||| || |  |||||||||||| ||||||||||| |||||| |||| || ||||||    
T  47204 gtctaaggtgaattaactttgtaggtggtctaccataaactttattaaattttttaattttaaccgtttgatctttttttaaaatga 47290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 48538 - 48449
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    ||||| ||||||||  |||| |||||||||||||||||| || ||||||| |||| ||||||||  |||||||| ||||||||| |||||    
T  48538 tttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtcatctccgttaattttt 48449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 96192 - 96267
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtc 243  Q
    ||||||| |||||||||||||| |||||||||||||||||| ||  ||||||||||| ||||||||||||||||||    
T  96192 attttcaatttggtcccctaactataaagtgtctcaatttgatccgataaatcttcttccgtttaccattttggtc 96267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 96898 - 96856
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    |||||| |||| ||||||||||||||| |||||||||||||||    
T  96898 ttttcaatttgatcccctaacaataaactgtctcaatttggtc 96856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 598 - 512
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagt 255  Q
    |||||| || ||||||||||| ||||||||||||||||||||  |||||||||| | |||||||| ||||||||| |||||||||||    
T  598 ttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgttagt 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 1245 - 1359
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaa 269  Q
    ||||| |||||||||||||  ||||||| |||||||||||||| ||||  |||||||||||||| ||| ||||| ||||||||| |||||||| | |||     
T  1245 tttcattttggtcccctaattataaagtctctcaatttggtcatataacccttctaccgtttacaattgtggtcctctccgttattttttaaccttaaat 1344  T
Q  270 atctaaggtgaacca 284  Q
     | ||||||||||||    
T  1345 gtttaaggtgaacca 1359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 2348 - 2258
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||  ||||||||| ||||||||||| ||||| |||||||| |||||| ||||||||| | |||||||||||||    
T  2348 ttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctactgtttactattttggtcctttccgttagttttt 2258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 346
Target Start/End: Original strand, 16022 - 16155
Alignment:
Q  213 cataaatcttctaccgtttaccattttggtcttctccgttagtttttaacatcaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatctt 312  Q
    |||||| ||| | |||||||| ||||| ||| |||||||||||||||||| | |||  |||||| |||||||  |||| ||||||| |||| |||| |||    
T  16022 cataaaccttatgccgtttactattttagtcctctccgttagtttttaaccttaaatgtctaagatgaaccaactttatagatggtccaccatagacctt 16121  T
Q  313 attaaattttctaattttaaccatttgatttttt 346  Q
    ||||||  || || |||||||| |||||| ||||    
T  16122 attaaaccttttatttttaaccgtttgatatttt 16155  T

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Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 73069 - 72979
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||||||||||||||||||||||||||||| ||| |||||| | ||  ||||||  ||||  |  |||||||| |||||||||||||||    
T  73069 ttttcactttggtcccctaacaataaagtgtcacaaattggtctcttatgtcttctgtcgttacctcttttggtcctctccgttagttttt 72979  T

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Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 23439 - 23494
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttct 224  Q
    |||||| |||||||||||||| ||||| ||||||||||||||| ||||| ||||||    
T  23439 ttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 23494  T

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Target: scaffold0046; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 24898 - 24808
Alignment:
Q  169 ttttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttttt 259  Q
    |||||| |||||||||||||  ||||||||| ||||||||||| | ||  |||||  |||||  | ||||||||| |||||||||||||||    
T  24898 ttttcagtttggtcccctaattataaagtgtttcaatttggtcccttatgtcttcctccgttacctattttggtcatctccgttagttttt 24808  T

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Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 25956 - 25997
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  25956 tttcattttggtcccctaactataaagtgtctcaatttggtc 25997  T

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Target: scaffold0038; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 26998 - 26960
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttg 208  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  26998 tttcattttggtcccctaactataaagtgtctcaatttg 26960  T

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Target: scaffold0369 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 12942 - 13030
Alignment:
Q  168 attttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagtt 256  Q
    ||||| ||||||||||| |||  ||||||||||||||||||||| ||||||| || |  ||||||  ||||||||  ||||| ||||||    
T  12942 atttttactttggtcccataattataaagtgtctcaatttggtctcataaatattttgtcgtttagtattttggtaatctccattagtt 13030  T

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Target: scaffold0177 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 1789 - 1876
Alignment:
Q  170 tttcactttggtcccctaacaataaagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgttagttt 257  Q
    ||||| |||||||||||||  ||||||||||||||||||||| | ||  ||||||  ||||  |  |||||||| |||||||||||||    
T  1789 tttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttagttt 1876  T

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Target: scaffold0166 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 4276 - 4217
Alignment:
Q  194 aagtgtctcaatttggtcacataaatcttctaccgtttaccattttggtcttctccgtta 253  Q
    ||||||||||||||| || ||||| || ||| ||||||||||||||| || |||||||||    
T  4276 aagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgtta 4217  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 5209 - 5244
Alignment:
Q  176 tttggtcccctaacaataaagtgtctcaatttggtc 211  Q
    |||||||||||||| |||||||||||||||||||||    
T  5209 tttggtcccctaactataaagtgtctcaatttggtc 5244  T

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