View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19430_high_20 (Length: 218)
Name: NF19430_high_20
Description: NF19430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19430_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 37060831 - 37060645
Alignment:
| Q |
15 |
aagaataagtgaaatatgcaaaatatatata--aaaagaaaacttagataatgatattgcttgatttgtagcttgaccatattgttgcttagttagtgaa |
112 |
Q |
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| T |
37060831 |
aagaataagtgaaatatgcaaaatatatatataaaaagaaaacttagataatgatattgcttgatttgtagcttgaccatattgttgcttagttagtgaa |
37060732 |
T |
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| Q |
113 |
atgaaagaaaaaggcacaaaagtatgatactttgctctctctctcgtccaataataatgaagttcatgagtcgacaaatgaaaatgt |
199 |
Q |
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| T |
37060731 |
atcaaagaaaaaggcacaaaagtatgatactttgctctctctctcgtccaataataatggagttcatgagccgacaaatgaaaatgt |
37060645 |
T |
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