View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19430_high_6 (Length: 413)

Name: NF19430_high_6
Description: NF19430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19430_high_6
NF19430_high_6
[»] chr6 (49 HSPs)
chr6 (18-275)||(33329930-33330187)
chr6 (18-274)||(16839076-16839332)
chr6 (18-275)||(33335427-33335684)
chr6 (18-273)||(6005752-6006007)
chr6 (18-265)||(5343810-5344057)
chr6 (18-265)||(6438829-6439076)
chr6 (18-213)||(28155130-28155325)
chr6 (25-267)||(14741931-14742173)
chr6 (27-267)||(22010194-22010434)
chr6 (27-267)||(11857323-11857562)
chr6 (25-179)||(14737159-14737313)
chr6 (105-267)||(30125023-30125185)
chr6 (88-265)||(6136363-6136540)
chr6 (87-179)||(5266487-5266579)
chr6 (34-264)||(5674238-5674467)
chr6 (88-265)||(16578917-16579094)
chr6 (88-265)||(16616286-16616463)
chr6 (88-264)||(22709460-22709636)
chr6 (88-265)||(33342503-33342681)
chr6 (88-260)||(34166678-34166851)
chr6 (88-164)||(6026942-6027018)
chr6 (88-164)||(13150957-13151034)
chr6 (88-265)||(25420804-25420981)
chr6 (88-273)||(27647467-27647652)
chr6 (88-164)||(34164552-34164629)
chr6 (215-267)||(5266596-5266648)
chr6 (215-267)||(14737090-14737142)
chr6 (88-265)||(16554461-16554638)
chr6 (88-265)||(16631017-16631194)
chr6 (108-264)||(2171939-2172095)
chr6 (215-265)||(5016976-5017026)
chr6 (215-265)||(31085953-31086003)
chr6 (215-275)||(24714938-24714999)
chr6 (198-274)||(23896882-23896958)
chr6 (33-68)||(22709499-22709534)
chr6 (88-143)||(25421020-25421075)
chr6 (87-164)||(411794-411872)
chr6 (34-68)||(2171959-2171993)
chr6 (87-145)||(3073157-3073215)
chr6 (232-265)||(18234667-18234700)
chr6 (224-273)||(21272461-21272510)
chr6 (232-265)||(28155097-28155130)
chr6 (108-164)||(5757060-5757116)
chr6 (32-72)||(16554655-16554694)
chr6 (32-72)||(16578861-16578900)
chr6 (32-72)||(16616480-16616519)
chr6 (32-72)||(16631211-16631250)
chr6 (32-72)||(16652898-16652937)
chr6 (108-164)||(23896792-23896848)
[»] chr5 (54 HSPs)
chr5 (18-275)||(33791649-33791906)
chr5 (18-275)||(33768517-33768774)
chr5 (18-273)||(2785708-2785963)
chr5 (16-273)||(31396489-31396746)
chr5 (16-275)||(31401344-31401603)
chr5 (18-265)||(28807083-28807330)
chr5 (18-275)||(37560945-37561201)
chr5 (18-273)||(37556125-37556379)
chr5 (25-267)||(15045033-15045274)
chr5 (267-403)||(36060919-36061056)
chr5 (30-267)||(1456643-1456880)
chr5 (27-267)||(27450165-27450404)
chr5 (27-267)||(43599073-43599313)
chr5 (27-267)||(43604565-43604805)
chr5 (27-267)||(43610057-43610297)
chr5 (27-267)||(27445322-27445561)
chr5 (86-267)||(30631762-30631943)
chr5 (94-267)||(29402555-29402728)
chr5 (29-179)||(43592630-43592779)
chr5 (27-179)||(31180604-31180756)
chr5 (88-265)||(16546223-16546400)
chr5 (88-265)||(16544001-16544178)
chr5 (88-265)||(40379685-40379862)
chr5 (88-265)||(40381896-40382073)
chr5 (34-264)||(24136246-24136475)
chr5 (88-260)||(25077718-25077890)
chr5 (88-260)||(25135687-25135859)
chr5 (88-264)||(26177475-26177651)
chr5 (88-265)||(10592851-10593027)
chr5 (88-265)||(22536668-22536845)
chr5 (215-273)||(14520796-14520854)
chr5 (88-264)||(16407650-16407826)
chr5 (198-264)||(9352816-9352882)
chr5 (88-260)||(9789624-9789796)
chr5 (88-260)||(18442048-18442220)
chr5 (87-143)||(29751559-29751615)
chr5 (215-267)||(31180773-31180825)
chr5 (88-164)||(38219845-38219921)
chr5 (215-267)||(43592797-43592849)
chr5 (215-273)||(12083650-12083708)
chr5 (88-273)||(26170357-26170542)
chr5 (33-143)||(35388058-35388169)
chr5 (270-323)||(36062681-36062734)
chr5 (224-261)||(36931855-36931892)
chr5 (224-264)||(11916453-11916493)
chr5 (87-260)||(29719978-29720152)
chr5 (198-264)||(16409086-16409152)
chr5 (33-68)||(24136338-24136373)
chr5 (232-267)||(43625608-43625643)
chr5 (198-264)||(15465050-15465116)
chr5 (108-164)||(9352916-9352972)
chr5 (32-72)||(10593044-10593083)
chr5 (88-164)||(16409186-16409262)
chr5 (224-260)||(35388197-35388233)
[»] chr8 (31 HSPs)
chr8 (18-274)||(35745724-35745980)
chr8 (25-265)||(39784332-39784572)
chr8 (18-267)||(10683744-10683993)
chr8 (25-267)||(25327669-25327911)
chr8 (27-267)||(4759539-4759778)
chr8 (87-267)||(36979829-36980009)
chr8 (27-266)||(6311690-6311929)
chr8 (27-267)||(18852632-18852871)
chr8 (27-267)||(30656038-30656277)
chr8 (27-267)||(18870026-18870265)
chr8 (27-267)||(7289432-7289673)
chr8 (87-267)||(33037292-33037472)
chr8 (27-179)||(10688692-10688844)
chr8 (33-264)||(1261423-1261655)
chr8 (88-265)||(3439095-3439271)
chr8 (88-265)||(42575724-42575902)
chr8 (198-273)||(7412877-7412952)
chr8 (88-167)||(25689646-25689725)
chr8 (215-265)||(5701959-5702009)
chr8 (88-260)||(26288332-26288504)
chr8 (88-260)||(26301589-26301761)
chr8 (88-260)||(26313583-26313755)
chr8 (89-265)||(15290150-15290327)
chr8 (89-265)||(15470519-15470696)
chr8 (215-267)||(10688623-10688675)
chr8 (88-264)||(2627327-2627503)
chr8 (215-273)||(4456575-4456633)
chr8 (215-264)||(19175233-19175282)
chr8 (215-265)||(25689568-25689618)
chr8 (34-68)||(33037397-33037431)
chr8 (225-265)||(23799099-23799139)
[»] scaffold0197 (2 HSPs)
scaffold0197 (18-275)||(18661-18918)
scaffold0197 (18-265)||(13791-14038)
[»] chr2 (29 HSPs)
chr2 (18-275)||(19344755-19345012)
chr2 (18-273)||(19349613-19349868)
chr2 (27-267)||(39811482-39811722)
chr2 (18-267)||(32247119-32247347)
chr2 (27-267)||(14291881-14292120)
chr2 (27-267)||(9295867-9296106)
chr2 (27-267)||(11098392-11098631)
chr2 (88-265)||(12647783-12647960)
chr2 (88-273)||(25410081-25410266)
chr2 (108-264)||(3492212-3492368)
chr2 (88-260)||(4484738-4484910)
chr2 (88-264)||(32289157-32289333)
chr2 (215-272)||(8389624-8389681)
chr2 (108-264)||(30832930-30833086)
chr2 (198-267)||(44310476-44310545)
chr2 (215-274)||(10706724-10706783)
chr2 (224-265)||(20522797-20522838)
chr2 (224-265)||(33528105-33528146)
chr2 (215-271)||(36757419-36757475)
chr2 (215-275)||(39483443-39483503)
chr2 (215-266)||(21630511-21630562)
chr2 (215-273)||(23077944-23078002)
chr2 (215-273)||(28258669-28258727)
chr2 (233-274)||(13569914-13569955)
chr2 (33-68)||(25410120-25410155)
chr2 (33-68)||(30833032-30833067)
chr2 (198-264)||(40739382-40739448)
chr2 (34-68)||(3492232-3492266)
chr2 (108-164)||(28258759-28258815)
[»] scaffold0259 (1 HSPs)
scaffold0259 (18-265)||(1746-1993)
[»] scaffold0028 (1 HSPs)
scaffold0028 (18-265)||(148451-148698)
[»] chr1 (31 HSPs)
chr1 (18-273)||(43987948-43988203)
chr1 (18-275)||(44023375-44023631)
chr1 (18-265)||(25439406-25439653)
chr1 (18-274)||(1054513-1054768)
chr1 (18-265)||(25444599-25444846)
chr1 (18-265)||(39445828-39446075)
chr1 (25-264)||(41390939-41391177)
chr1 (25-211)||(41398594-41398779)
chr1 (27-179)||(24786918-24787069)
chr1 (27-179)||(24793740-24793891)
chr1 (88-265)||(44203225-44203402)
chr1 (87-260)||(20622635-20622808)
chr1 (87-264)||(51764999-51765176)
chr1 (108-264)||(19360921-19361077)
chr1 (215-265)||(13598967-13599017)
chr1 (215-273)||(37070334-37070392)
chr1 (215-264)||(21536121-21536170)
chr1 (224-265)||(26644381-26644422)
chr1 (88-265)||(9036010-9036187)
chr1 (33-164)||(9986894-9987026)
chr1 (110-260)||(19365781-19365931)
chr1 (215-267)||(24793671-24793723)
chr1 (198-264)||(24202260-24202326)
chr1 (224-260)||(13604108-13604144)
chr1 (87-143)||(24202360-24202416)
chr1 (224-267)||(13659849-13659892)
chr1 (33-68)||(19361023-19361058)
chr1 (33-68)||(19365879-19365914)
chr1 (215-273)||(3282273-3282331)
chr1 (87-164)||(21053648-21053726)
chr1 (224-265)||(16124188-16124229)
[»] chr3 (62 HSPs)
chr3 (18-264)||(2672427-2672673)
chr3 (18-265)||(24968450-24968697)
chr3 (18-265)||(8512573-8512820)
chr3 (18-264)||(2676583-2676829)
chr3 (18-265)||(8517453-8517700)
chr3 (18-275)||(32475817-32476074)
chr3 (18-273)||(32480675-32480930)
chr3 (18-267)||(18656774-18657024)
chr3 (33-267)||(22172667-22172900)
chr3 (27-267)||(28503324-28503564)
chr3 (27-267)||(40372261-40372500)
chr3 (27-267)||(28501157-28501397)
chr3 (27-265)||(8477758-8477995)
chr3 (87-267)||(7167697-7167877)
chr3 (27-164)||(27352189-27352325)
chr3 (27-179)||(8738616-8738767)
chr3 (27-179)||(9090854-9091005)
chr3 (87-179)||(2671158-2671250)
chr3 (88-265)||(54634717-54634894)
chr3 (88-265)||(4598922-4599100)
chr3 (88-265)||(4601143-4601321)
chr3 (88-265)||(6716092-6716269)
chr3 (215-275)||(36029659-36029719)
chr3 (88-260)||(10055817-10055990)
chr3 (88-260)||(10058039-10058212)
chr3 (88-260)||(10060261-10060434)
chr3 (88-260)||(10062483-10062656)
chr3 (88-260)||(10064705-10064878)
chr3 (88-260)||(10066927-10067100)
chr3 (88-164)||(25637121-25637197)
chr3 (215-267)||(30709264-30709316)
chr3 (215-275)||(39032015-39032075)
chr3 (88-167)||(6718374-6718453)
chr3 (88-265)||(10208785-10208963)
chr3 (88-265)||(10210985-10211163)
chr3 (215-273)||(16264896-16264954)
chr3 (215-265)||(21711768-21711818)
chr3 (215-273)||(27974433-27974491)
chr3 (198-264)||(37726224-37726290)
chr3 (224-265)||(1730916-1730957)
chr3 (108-264)||(1306439-1306595)
chr3 (224-267)||(8738547-8738590)
chr3 (224-267)||(9090785-9090828)
chr3 (198-264)||(23200654-23200720)
chr3 (198-264)||(26928089-26928155)
chr3 (198-264)||(37408045-37408111)
chr3 (198-264)||(23198455-23198521)
chr3 (215-273)||(27027273-27027331)
chr3 (215-273)||(27038608-27038666)
chr3 (88-265)||(3617041-3617218)
chr3 (224-265)||(40592252-40592293)
chr3 (215-260)||(40734087-40734132)
chr3 (215-267)||(35926057-35926108)
chr3 (224-267)||(16498642-16498685)
chr3 (224-266)||(24694654-24694697)
chr3 (88-143)||(45282695-45282750)
chr3 (215-266)||(48438782-48438833)
chr3 (88-260)||(800698-800870)
chr3 (34-68)||(1306459-1306493)
chr3 (224-266)||(47923326-47923368)
chr3 (215-264)||(32143870-32143919)
chr3 (215-259)||(27985971-27986015)
[»] chr7 (40 HSPs)
chr7 (18-265)||(24265684-24265931)
chr7 (18-265)||(16880406-16880653)
chr7 (18-265)||(16885261-16885508)
chr7 (18-265)||(24260828-24261075)
chr7 (18-264)||(21811747-21811993)
chr7 (25-267)||(24023824-24024066)
chr7 (27-275)||(31109068-31109316)
chr7 (27-267)||(12406612-12406852)
chr7 (27-267)||(4873476-4873716)
chr7 (87-267)||(2058420-2058599)
chr7 (87-267)||(21640238-21640418)
chr7 (27-149)||(12397260-12397382)
chr7 (86-267)||(20357033-20357214)
chr7 (88-265)||(18392596-18392773)
chr7 (87-260)||(24789439-24789612)
chr7 (88-265)||(6592737-6592914)
chr7 (88-265)||(20343507-20343684)
chr7 (33-264)||(21646402-21646634)
chr7 (88-265)||(6594953-6595130)
chr7 (88-265)||(32060704-32060881)
chr7 (88-264)||(39730942-39731118)
chr7 (88-264)||(48408407-48408583)
chr7 (198-275)||(21983792-21983869)
chr7 (89-164)||(1533012-1533087)
chr7 (88-261)||(43504536-43504709)
chr7 (88-264)||(18414090-18414266)
chr7 (198-273)||(47264192-47264267)
chr7 (215-273)||(79955-80013)
chr7 (88-264)||(18409214-18409390)
chr7 (198-267)||(12397418-12397487)
chr7 (224-273)||(21989482-21989531)
chr7 (88-164)||(1562403-1562479)
chr7 (198-273)||(2479885-2479960)
chr7 (198-273)||(44847619-44847694)
chr7 (199-264)||(1532893-1532958)
chr7 (88-164)||(25767361-25767437)
chr7 (198-265)||(1562513-1562580)
chr7 (88-143)||(18389160-18389215)
chr7 (34-68)||(1533014-1533048)
chr7 (34-68)||(21640279-21640313)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-266)||(176456-176704)
[»] scaffold0464 (1 HSPs)
scaffold0464 (18-265)||(691-938)
[»] chr4 (38 HSPs)
chr4 (25-265)||(45347324-45347564)
chr4 (25-275)||(18856062-18856311)
chr4 (18-209)||(45356861-45357052)
chr4 (18-267)||(5732992-5733242)
chr4 (27-267)||(9223904-9224144)
chr4 (27-267)||(9228691-9228931)
chr4 (25-267)||(3814359-3814600)
chr4 (27-276)||(56141508-56141757)
chr4 (27-267)||(24742333-24742572)
chr4 (25-179)||(18712348-18712502)
chr4 (27-267)||(51520806-51521045)
chr4 (87-179)||(29761073-29761165)
chr4 (154-265)||(18860403-18860514)
chr4 (88-260)||(7122279-7122451)
chr4 (88-260)||(7124501-7124673)
chr4 (88-265)||(8392989-8393166)
chr4 (88-264)||(28467986-28468162)
chr4 (209-275)||(5143803-5143869)
chr4 (88-265)||(8395198-8395375)
chr4 (215-275)||(16628343-16628403)
chr4 (224-275)||(3778124-3778175)
chr4 (87-264)||(13992693-13992870)
chr4 (215-273)||(38151910-38151968)
chr4 (215-271)||(8689038-8689094)
chr4 (215-273)||(5148244-5148302)
chr4 (215-273)||(16622766-16622824)
chr4 (88-260)||(31495717-31495889)
chr4 (224-265)||(5268699-5268740)
chr4 (215-275)||(6742886-6742946)
chr4 (215-266)||(10047932-10047983)
chr4 (88-265)||(5135656-5135834)
chr4 (88-265)||(5137882-5138060)
chr4 (224-273)||(5396164-5396213)
chr4 (215-267)||(29761182-29761234)
chr4 (215-265)||(54867745-54867795)
chr4 (32-72)||(8393183-8393222)
chr4 (32-72)||(8395392-8395431)
chr4 (215-266)||(9194164-9194216)
[»] scaffold0355 (1 HSPs)
scaffold0355 (25-267)||(3342-3584)
[»] scaffold0135 (1 HSPs)
scaffold0135 (27-267)||(34559-34799)
[»] scaffold0665 (2 HSPs)
scaffold0665 (71-179)||(8091-8199)
scaffold0665 (215-267)||(8216-8268)
[»] scaffold0674 (1 HSPs)
scaffold0674 (88-265)||(4126-4303)
[»] scaffold0286 (2 HSPs)
scaffold0286 (88-264)||(21948-22124)
scaffold0286 (34-68)||(22050-22084)
[»] scaffold0565 (1 HSPs)
scaffold0565 (88-265)||(3001-3178)
[»] scaffold0188 (1 HSPs)
scaffold0188 (88-264)||(17440-17616)
[»] scaffold0137 (1 HSPs)
scaffold0137 (88-265)||(5866-6044)
[»] scaffold1455 (1 HSPs)
scaffold1455 (198-265)||(1716-1783)
[»] scaffold0491 (2 HSPs)
scaffold0491 (88-264)||(9124-9299)
scaffold0491 (88-264)||(11569-11744)
[»] scaffold0087 (2 HSPs)
scaffold0087 (227-273)||(36324-36370)
scaffold0087 (198-264)||(43443-43509)
[»] scaffold0006 (4 HSPs)
scaffold0006 (215-265)||(6252-6302)
scaffold0006 (227-265)||(3072-3110)
scaffold0006 (224-260)||(132765-132801)
scaffold0006 (224-267)||(149610-149653)
[»] scaffold0098 (1 HSPs)
scaffold0098 (224-264)||(45755-45795)
[»] scaffold0036 (1 HSPs)
scaffold0036 (215-275)||(86153-86214)
[»] scaffold0510 (2 HSPs)
scaffold0510 (198-274)||(1082-1158)
scaffold0510 (108-164)||(1192-1248)
[»] scaffold0140 (1 HSPs)
scaffold0140 (198-264)||(7920-7986)


Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 33330187 - 33329930
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33330187 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccag 33330088  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  33330087 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaa 33329988  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33329987 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatt 33329930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 16839076 - 16839332
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  16839076 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagatacttaaccag 16839175  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  16839176 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaa 16839275  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacat 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16839276 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 16839332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 33335684 - 33335427
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33335684 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccag 33335585  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  33335584 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaa 33335485  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33335484 tcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatt 33335427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 6005752 - 6006007
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6005752 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccag 6005851  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||  || ||||||||||||||||||||||||||    
T  6005852 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcatggcatctccgatcgtgtcacgattgccaaa 6005951  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  6005952 tcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaattttcaaca 6006007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 5343810 - 5344057
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||    
T  5343810 agtccagccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccag 5343909  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| | |||| ||||||| |||| | ||||||||||||||  |||||    
T  5343910 caagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagaagacttggctcacttcctccctgatcgtgtcacgatgaccaaa 5344009  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  5344010 tcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaat 5344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 6438829 - 6439076
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||    
T  6438829 agtccttccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaactag 6438928  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||    
T  6438929 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaa 6439028  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| | ||||||| || |||||||||| |||| |||||||||||||||    
T  6439029 tcgtgtcacgatttctatgttcttccagaccataaatttgaagccaat 6439076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 28155325 - 28155130
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28155325 agtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccag 28155226  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgc 213  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||  || |||||||| |||||| || |||| |||||||||||||||||    
T  28155225 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgattgc 28155130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 14742173 - 14741931
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||  ||||||| |||||||||||| |||||||||| |||||||||    
T  14742173 ccctgaagaaatcgtgccacgatttccttagatcgtgtcacgatctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagttt 14742074  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcga 223  Q
    ||||||||||||||||||| ||||| |||||||||||||| || ||| |||||| ||||||||  || | |   |||||||||||||  | |||||| |     
T  14742073 ctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacgaccacttgaaatcgtgtcacgatgccaaaatcgtgt 14741975  T
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  14741974 cacgatttctctgttcttccagaccacaaatttgaagccaatat 14741931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 22010434 - 22010194
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| |||  ||| ||| |||||||||||| |||||||||| |||||||||||    
T  22010434 ctgaagaaatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttct 22010335  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||| || || || ||| | |   |||||||||||||  | |||||| | ||    
T  22010334 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-taacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtca 22010236  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  22010235 cgatttctctgttcttccagaccacaaatttgaagccaatat 22010194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 11857323 - 11857562
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||||||| ||||||||||| | ||||||||||||| |||||||| |||  ||||||| |||||||||||| | |||||||| |||||||||||    
T  11857323 ctgaagaaatcgtgccacgatttcccaa-atcgtgtcacgatttgcaacggacccaaggttgacaagtccttatcagtgttacttaacgagcaagtttct 11857421  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
     |||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||| | |   |||||||||||||  | |||||| | ||    
T  11857422 aaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtca 11857520  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  11857521 cgatttctctgttcttccagaccacaaatttgaagccaatat 11857562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 14737313 - 14737159
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||| |||||||||| |||||||||    
T  14737313 ccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagttt 14737214  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    ||||||||||||||||||| ||||| |||||||||||||| || ||| |||||||    
T  14737213 ctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaact 14737159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 105 - 267
Target Start/End: Complemental strand, 30125185 - 30125023
Alignment:
Q  105 gatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtg 203  Q
    |||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||| || ||| |||||| |||||||| ||  |||   ||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtg 30125087  T
Q  204 tcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  30125086 tcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 30125023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 6136363 - 6136540
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||   |||||||||||||||    || |||| | ||||||||    
T  6136363 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctcac 6136462  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||| ||||| | |||||| | ||||||| | ||||||||||||||||||||||||||| ||||    
T  6136463 ggcatccgaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 6136540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 5266487 - 5266579
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    ||||||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  5266487 tgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 5266579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 34 - 264
Target Start/End: Complemental strand, 5674467 - 5674238
Alignment:
Q  34 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttctgaatcg 132  Q
    ||||||||||||||||||  ||||||||||||||| |||    |||||  ||| ||||||||||||||||  |||||||||| ||||||||||  |||||    
T  5674467 aatcgtgtcacgatttcc--agatcgtgtcacgatttgcgtacgtcccaaggtatgaccagtccttatcacggatacttaacgagcaagtttcaaaatcg 5674370  T
Q  133 tgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatt 230  Q
    ||||||||||||||||| | ||| |||||||| ||  || ||||||  ||||||| || || |   ||| |||||||| ||||||| ||  | |||||||    
T  5674369 tgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcatgtcacga-tgccaaattcatgtcacgatt 5674272  T
Q  231 cctctgttcttccaaaccacaaatttgaagccaa 264  Q
     ||||||||||||| |||||||||||||||||||    
T  5674271 tctctgttcttccagaccacaaatttgaagccaa 5674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 16578917 - 16579094
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  |||||||||||||||||  || || ||| ||||||||    
T  16578917 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgc-aacctagctcac 16579015  T
Q  188 tgcctctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     | | | |||  |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  16579016 -ggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16579094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 16616463 - 16616286
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  |||||||||||||||||  || || ||| ||||||||    
T  16616463 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgc-aacctagctcac 16616365  T
Q  188 tgcctctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     | | | |||  |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  16616364 -ggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16616286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 264
Target Start/End: Original strand, 22709460 - 22709636
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   |||||||||||||||||||||| ||||| |||||||| ||  || ||||||  ||||||     
T  22709460 gaccagtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcat 22709558  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || || |   ||||||||||| |||||||| ||| | || |||| ||||||||||||| |||||||||||||||||||    
T  22709559 ggcatcacaaaatcgtgtcacg-ttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaa 22709636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 33342503 - 33342681
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttccca-aggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  ||||||||||||||||||| |  ||||||||||||||     || |||| | |||||||    
T  33342503 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctca 33342602  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    | || ||    |||| ||| ||||  | |||||| | ||||||| |  |||||||||||||||||||||||||| ||||    
T  33342603 cggcatccgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaat 33342681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 34166851 - 34166678
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || ||||    
T  34166851 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 34166752  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    | || ||    |||| ||||||||  | |||||| | ||||||| | |||||||||||||||||||||||||||    
T  34166751 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 34166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 6027018 - 6026942
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||| ||||||||||  |||||||||| |||||||||||| ||||||||||||||| || |  ||||||||||||||    
T  6027018 gaccggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt 6026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 13151034 - 13150957
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||    
T  13151034 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt 13150957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 25420981 - 25420804
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  ||||||||||||||     || |||| | ||||||||    
T  25420981 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 25420882  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    ||||||||||| |  | |||| | | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  25420881 ggcatccgaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 25420804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 273
Target Start/End: Complemental strand, 27647652 - 27647467
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    ||||||||  |||||  |||||||||| ||||||||||   |||||||||||||||| ||   |||||||||||||||||  || || ||| ||||||||    
T  27647652 gaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgc-aacctagctcac 27647554  T
Q  188 tgcctctccg--atcgtgtcacgattgcca-aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
     | | | |||  |||||||||||| ||||| ||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  27647553 -ggcaccccgaaatcgtgtcacga-tgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaaactcaaca 27647467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 34164629 - 34164552
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||    
T  34164629 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt 34164552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 5266596 - 5266648
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  5266596 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 5266648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 14737142 - 14737090
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 14737090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 16554638 - 16554461
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  ||||||||| |||||||  || |  ||| ||||||||    
T  16554638 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctg-taacctagctcac 16554540  T
Q  188 tgcctctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     | | | |||  |||||||||||||  | |||||  | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  16554539 -ggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16554461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 16631194 - 16631017
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  ||||||||| |||||||  || |  ||| ||||||||    
T  16631194 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctg-taacctagctcac 16631096  T
Q  188 tgcctctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     | | | |||  |||||||||||||  | |||||  | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  16631095 -ggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16631017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 264
Target Start/End: Original strand, 2171939 - 2172095
Alignment:
Q  108 acttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtca 206  Q
    ||||||| |||||||||   |||||||||||||||||||||| ||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||    
T  2171939 acttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaatcgtgtca 2172037  T
Q  207 cgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||| ||||||| ||  | | ||||| ||||||||||||| |||||||||||||| ||||    
T  2172038 cga-tgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaa 2172095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 5017026 - 5016976
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| | |||||||  |||||||||||||||||||||||||||||||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 5016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 31086003 - 31085953
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| | ||||||| ||||||||||| ||||||||||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaat 31085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 24714938 - 24714999
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccac-aaatttgaagccaatattcaacatt 275  Q
    |||||| | ||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||    
T  24714938 aaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaattttcaacatt 24714999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 23896882 - 23896958
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacat 274  Q
    |||||||||||||  | |||||| | |||||||  ||||||||| |||||||||||||||||| |||  ||||||||    
T  23896882 atcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaacat 23896958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 22709499 - 22709534
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    |||||||||||||||||||| |||||||||||||||    
T  22709499 aaatcgtgtcacgatttcccaagatcgtgtcacgat 22709534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 25421075 - 25421020
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgattt 143  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||    
T  25421075 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 25421020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 411872 - 411794
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    ||||||||||||||||  || ||||||| ||||||||| |  ||||||||||||||||||||   ||||| ||||||||    
T  411872 tgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgattt 411794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 2171959 - 2171993
Alignment:
Q  34 aatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    ||||||||||||||||||| |||||||||||||||    
T  2171959 aatcgtgtcacgatttcccaagatcgtgtcacgat 2171993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 3073157 - 3073215
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcc 145  Q
    ||||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||    
T  3073157 tgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcc 3073215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 18234667 - 18234700
Alignment:
Q  232 ctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||||||||||||||||||||||||| ||||||||    
T  18234667 ctctgttcttccaaaccacaaatttaaagccaat 18234700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 21272510 - 21272461
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    ||||||| | |||||| |||||| |||||||||||||||||||| |||||    
T  21272510 cacgatttccctgttcctccaaaacacaaatttgaagccaatatacaaca 21272461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 28155130 - 28155097
Alignment:
Q  232 ctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||||||||||||| ||||||||||||||||||||    
T  28155130 ctctgttcttccagaccacaaatttgaagccaat 28155097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 5757116 - 5757060
Alignment:
Q  108 acttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||||   ||||||||||||||||| |||  |||| |||||||||    
T  5757116 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgattt 5757060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 16554694 - 16554655
Alignment:
Q  32 gaaatcgtgtcacgatttccctagatcgtgtcacgatctgc 72  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  16554694 gaaatcgtgtcacgatttccc-aaatcgtgtcacgatctgc 16554655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 16578861 - 16578900
Alignment:
Q  32 gaaatcgtgtcacgatttccctagatcgtgtcacgatctgc 72  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  16578861 gaaatcgtgtcacgatttccc-aaatcgtgtcacgatctgc 16578900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 16616519 - 16616480
Alignment:
Q  32 gaaatcgtgtcacgatttccctagatcgtgtcacgatctgc 72  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  16616519 gaaatcgtgtcacgatttccc-aaatcgtgtcacgatctgc 16616480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 16631250 - 16631211
Alignment:
Q  32 gaaatcgtgtcacgatttccctagatcgtgtcacgatctgc 72  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  16631250 gaaatcgtgtcacgatttccc-aaatcgtgtcacgatctgc 16631211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 16652937 - 16652898
Alignment:
Q  32 gaaatcgtgtcacgatttccctagatcgtgtcacgatctgc 72  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  16652937 gaaatcgtgtcacgatttccc-aaatcgtgtcacgatctgc 16652898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 23896792 - 23896848
Alignment:
Q  108 acttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||||   ||||||||||||||||| |||  |||| |||||||||    
T  23896792 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgattt 23896848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 33791649 - 33791906
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33791649 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccag 33791748  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  33791749 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaa 33791848  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33791849 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatt 33791906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 33768517 - 33768774
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33768517 agtcatgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccag 33768616  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  33768617 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaa 33768716  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33768717 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatt 33768774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 2785708 - 2785963
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  2785708 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacgctccccaggttgaccagtccttatcagagatacttaaccag 2785807  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  2785808 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaa 2785907  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2785908 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 2785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 31396746 - 31396489
Alignment:
Q  16 caagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaacc 115  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  31396746 caagtcctgccctgaagaaatcgtgtcacgattaccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaacc 31396647  T
Q  116 agcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgcca 215  Q
    | ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31396646 aacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgcca 31396547  T
Q  216 aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  31396546 aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 31396489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 16 - 275
Target Start/End: Complemental strand, 31401603 - 31401344
Alignment:
Q  16 caagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaacc 115  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |    
T  31401603 caagtcctgccctgaagaaatcgtgtcacgattaccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaagc 31401504  T
Q  116 agcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgcca 215  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31401503 agcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgcca 31401404  T
Q  216 aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    ||||| |||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  31401403 aatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaattttcaacatt 31401344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 28807330 - 28807083
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  28807330 agtcctgccctgaagaaatcgtgccacgagttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccaa 28807231  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||  || |||||||| |||||| || |||| ||||||||||||||||| |||    
T  28807230 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgattgcaaaa 28807131  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  28807130 tcgtgacacgattcctctgttcttccagaccataaatttgaagccaat 28807083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 37561201 - 37560945
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  37561201 agtcctgccctgaagaaatcgtgccacgatttccctagatcatgtcacgatctgcaacggtccccaggttaaccagtccttatcagagatacttaaccag 37561102  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagc-aaacttagctcactgcctctccgatcgtgtcacgattgccaa 216  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||| | |||||| |||||| || |||| |||||||||||||||  |||    
T  37561101 caagtttctggatcgtgtcacgatttcccaagatcgtgccacga-tttgcctccatcaaaacttggctcacggcatctcagatcgtgtcacgattatcaa 37561003  T
Q  217 atcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||| | ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  37561002 atcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa-attcaacatt 37560945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 37556379 - 37556125
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||    
T  37556379 agtcctgccctgaagaaatcgtgccatgatttccctagatcgtgtcacgatctgcaacggtcctctggttaaccagtccttatcagagatacttaaccag 37556280  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagc-aaacttagctcactgcctctccgatcgtgtcacgattgccaa 216  Q
    |||||||||  |||||||||| |||||||||| ||||||||||| ||||| |||| | |||||| |||||| || |||| ||||||||||||||| ||||    
T  37556279 caagtttctagatcgtgtcacaatttcccaagatcgtgccacga-tttgcctccatcaaaacttggctcacggcatctcagatcgtgtcacgattaccaa 37556181  T
Q  217 atcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||| | ||||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  37556180 atcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa-attcaaca 37556125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 15045033 - 15045274
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||  |||||||||    
T  15045033 ccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggaccccaggttgaccagtccttatcagtgatacttaatgagcaagttt 15045132  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgcgac 224  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||| |||||| | |||||| || ||||  |||||||||||||| | |||||| | |    
T  15045133 ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtc 15045231  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  15045232 acgatttctctgttcttccaaactacaaatttgaagccaatat 15045274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 267 - 403
Target Start/End: Original strand, 36060919 - 36061056
Alignment:
Q  267 ttcaacattaccattaatttccctttgcttgtgaaaagaaagaatcaaaatgttggctattctatcggacaaatatcatcatttatggttgc-aaatttg 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |  ||||||    
T  36060919 ttcaacattaccattaatttccctttgcttgtgaaaagaaagaatcaaaatgttggctattctattggacaaatatcatcatttatggtttcgtaatttg 36061018  T
Q  366 agactaaaggaaataattcaattgatgcataccctttg 403  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36061019 agactaaaggaaataattcaattgatgcataccctttg 36061056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 30 - 267
Target Start/End: Complemental strand, 1456880 - 1456643
Alignment:
Q  30 aagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttctgaa 129  Q
    ||||||||||| ||||||||||| ||| ||||||||||| |||| | | |||  ||| ||| |||||||||||| |||||||||| ||||||||||||||    
T  1456880 aagaaatcgtgccacgatttcccaagaccgtgtcacgatttgcatctgacccaaggtagacaagtccttatcagggatacttaacaagcaagtttctgaa 1456781  T
Q  130 tcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgacacga 228  Q
    |||||||||||||||||||| |||||||||||||| || ||| | |||| |||||||| ||| | |   |||||||||||||  | |||||| | |||||    
T  1456780 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacga 1456682  T
Q  229 ttcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    || ||||||||||||| ||||||||||||||||||||||    
T  1456681 tttctctgttcttccagaccacaaatttgaagccaatat 1456643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 27450165 - 27450404
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||| ||||||| ||||||||||| | ||||||||||||| |||  | | |||  ||| |||||||||||||||| |||||||||| |||||||||||    
T  27450165 ctgaagcaatcgtgccacgatttcccaa-atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttct 27450263  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||| | |   |||||||||||||  | |||||| | ||    
T  27450264 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtca 27450362  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  27450363 cgatttctctgttcttccagaccacaaatttgaagccaatat 27450404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 43599073 - 43599313
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||| ||||||||||||||||||| | ||||||||||||| |||  | | |||  ||| |||||||||||||||| |||||||||| |||||||||||    
T  43599073 ctgaagcaatcgtgtcacgatttcccaa-atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttct 43599171  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc--tccgatcgtgtcacgattgccaaatcgcgac 224  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||| |  |   ||||||||||||   | |||||| | |    
T  43599172 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtc 43599270  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  43599271 acgatttctctgttcttccagaccacaaatttgaagccaatat 43599313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 43604565 - 43604805
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||| ||||||||||||||||||| | ||||||||||||| |||  | | |||  ||| |||||||||||||||| |||||||||| |||||||||||    
T  43604565 ctgaagcaatcgtgtcacgatttcccaa-atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttct 43604663  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc--tccgatcgtgtcacgattgccaaatcgcgac 224  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||| |  |   ||||||||||||   | |||||| | |    
T  43604664 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtc 43604762  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  43604763 acgatttctctgttcttccagaccacaaatttgaagccaatat 43604805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 43610057 - 43610297
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||| ||||||||||||||||||| | ||||||||||||| |||  | | |||  ||| |||||||||||||||| |||||||||| |||||||||||    
T  43610057 ctgaagcaatcgtgtcacgatttcccaa-atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttct 43610155  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc--tccgatcgtgtcacgattgccaaatcgcgac 224  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||| |  |   ||||||||||||   | |||||| | |    
T  43610156 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtc 43610254  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  43610255 acgatttctctgttcttccagaccacaaatttgaagccaatat 43610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 27445322 - 27445561
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||| ||||||| ||||||||||| | ||||||||||||| |||  | | |||  ||| |||||||||||||||| |||||||||| |||||||||||    
T  27445322 ctgaagcaatcgtgccacgatttcccaa-atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttct 27445420  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||| | |   |||||||||||||  | |||||| | ||    
T  27445421 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtca 27445519  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||| | ||||||||||||||||||||||    
T  27445520 cgatttctctgttcttctagaccacaaatttgaagccaatat 27445561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 267
Target Start/End: Original strand, 30631762 - 30631943
Alignment:
Q  86 ttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctc 185  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| |||||||| || ||| |||||| | ||||    
T  30631762 ttgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaac-tggctc 30631860  T
Q  186 actgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    || ||  |||   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  30631861 acggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 30631943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 94 - 267
Target Start/End: Complemental strand, 29402728 - 29402555
Alignment:
Q  94 tccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc 193  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||  ||| |    
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcatggccac 29402630  T
Q  194 -tccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
     |   |||||| ||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  29402629 ttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 29402555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 43592630 - 43592779
Alignment:
Q  29 gaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttctga 128  Q
    |||| ||||||||||||||||||| | ||||||||||||| |||  | | |||  ||| |||||||||||||||| |||||||||| |||||||||||||    
T  43592630 gaagcaatcgtgtcacgatttcccaa-atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctga 43592728  T
Q  129 atcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    ||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  43592729 atcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 43592779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 31180604 - 31180756
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||| ||||||| ||||||||||| ||||| ||||||||| |||  | | |||  |||||||||||||||||||| |||||||||| || |||| |||    
T  31180604 ctgaagcaatcgtgccacgatttcccaagatcatgtcacgatttgcgtctgacccaaggttgaccagtccttatcagtgatacttaacgagaaagtctct 31180703  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  31180704 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 31180756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 16546400 - 16546223
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  ||||| ||||| |||||  || |||| | ||||||||    
T  16546400 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcac 16546301  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     ||  |||| |||||||||||||| | |||||| | ||||||| | ||||||||||||||||||||||||||| ||||    
T  16546300 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaat 16546223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 16544178 - 16544001
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  ||||| ||||| |||||  || | || | ||||||||    
T  16544178 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagctcac 16544079  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     ||  |||| |||||||||||||| | |||||| | ||||||| | ||||||||||||||||||||||||||| ||||    
T  16544078 agcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaat 16544001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 40379862 - 40379685
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  ||||| ||||| |||||  || |||| | ||||||||    
T  40379862 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcac 40379763  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     ||  |||| |||||||||||||| | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  40379762 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 40379685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 40382073 - 40381896
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  ||||| ||||| |||||  || |||| | ||||||||    
T  40382073 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcac 40381974  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     ||  |||| |||||||||||||| | |||||| | ||||||| | |||||||| || ||||||||||||||| ||||    
T  40381973 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagacaat 40381896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 264
Target Start/End: Original strand, 24136246 - 24136475
Alignment:
Q  34 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttctgaatcg 132  Q
    ||||||| ||||||||||  ||||||||||||||| |||    |||||  ||| ||||||||||||||||  |||||||||| |||||||||   |||||    
T  24136246 aatcgtgccacgatttcc--agatcgtgtcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcg 24136343  T
Q  133 tgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatt 230  Q
    ||||||||||||||||| ||||| |||||||| ||  || |||||| |||||||| || || |   || ||||||||| ||||||| ||| | |||||||    
T  24136344 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-tagctcacggcatcacgaaattgtgtcacga-tgccaaattcgtgtcacgatt 24136441  T
Q  231 cctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || |||||||||| |||||||||||||| ||||    
T  24136442 tctgtgttcttccagaccacaaatttgaaaccaa 24136475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 25077890 - 25077718
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||   ||||| ||||||||     ||  ||| | ||||||||    
T  25077890 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcac 25077791  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     ||  |||| |||| ||||||||  | |||||| | ||||||| | ||||||||||| |||||||||||||||    
T  25077790 ggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25077718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 25135859 - 25135687
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||   ||||| ||||||||     ||  ||| | ||||||||    
T  25135859 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcac 25135760  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     ||  |||| |||| ||||||||  | |||||| | ||||||| | ||||||||||| |||||||||||||||    
T  25135759 ggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 26177651 - 26177475
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   |||||||||||||||||||| | ||||| |||||||| ||  || ||||||  |||||||    
T  26177651 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaac-cagctcac 26177553  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| |||||||||||||||||||    
T  26177552 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 26177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 10593027 - 10592851
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  |||||||||||||||||  || || ||| || |||||    
T  10593027 gaccagtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgc-aacctatctcac 10592929  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     ||  |    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  10592928 ggcacccggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 10592851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 22536668 - 22536845
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||   | |||||||||||||||  || || ||| ||||||||    
T  22536668 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgc-aacctagctcac 22536766  T
Q  188 tgcctctccg--atcgtgtcacgattgcca-aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     | | | |||  |||||||||||| ||||| ||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  22536767 -ggcaccccgaaatcgtgtcacga-tgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 22536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 14520796 - 14520854
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 14520854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 16407826 - 16407650
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||| ||||||||||  || ||||||| |||||||||   ||||||||||||||| | |||| ||||| |||||||| ||  || ||||||  |||||||    
T  16407826 gaccggtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 16407728  T
Q  188 tgcctctccga-tcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || || |  | ||||||||||||  | || ||| | ||||||| ||||||||||||| |||||||||||||||||||    
T  16407727 ggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 16407650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 9352882 - 9352816
Alignment:
Q  198 atcgtgtcacgattgcca-aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||||||||||| |||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  9352882 atcgtgtcacgat-gccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 9352816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 260
Target Start/End: Original strand, 9789624 - 9789796
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||   ||||| |||||||| ||  || ||||||  |||||||    
T  9789624 gaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaac-cagctcac 9789722  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| |||||||||||||||    
T  9789723 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9789796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 260
Target Start/End: Original strand, 18442048 - 18442220
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||   ||||| |||||||| ||  || ||||||  |||||||    
T  18442048 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaac-cagctcac 18442146  T
Q  188 tgcctc-tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| |||||||||||||||    
T  18442147 ggcatcatgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 18442220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 29751559 - 29751615
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgattt 143  Q
    ||||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||    
T  29751559 tgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 31180773 - 31180825
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 31180825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 38219845 - 38219921
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||| |||||||||| ||||| ||||||||    
T  38219845 gaccagtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgattt 38219921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 43592797 - 43592849
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 43592849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 12083708 - 12083650
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| |||||||||||||||||| |||||| |||||||||| |||||    
T  12083708 aaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaatatacaaca 12083650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 273
Target Start/End: Complemental strand, 26170542 - 26170357
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   |||  ||||||||||||||| | ||||| |||||||| ||  || ||||||  |||||||    
T  26170542 gaccagtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaac-cagctcac 26170444  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
     || || |   |||||||||||||  | || ||| | ||||||| | ||||||||||| |||| |||||||||||||| | ||||||    
T  26170443 ggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaagccaaaactcaaca 26170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 35388058 - 35388169
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacg---gtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttctga 128  Q
    |||||||||||||||||||  ||||||||||||||| || ||||   |||||  ||| ||||||||||||||||  |||||||||| |||||||||   |    
T  35388058 aaatcgtgtcacgatttcc--agatcgtgtcacgatttg-aacgtacgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaa 35388154  T
Q  129 atcgtgtcacgattt 143  Q
    |||||||||| ||||    
T  35388155 atcgtgtcacaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 36062681 - 36062734
Alignment:
Q  270 aacattaccattaatttccctttgcttgtgaaaagaaagaatcaaaatgttggc 323  Q
    |||| |||||| |||||||| |||||||||||||| ||||||| ||||||||||    
T  36062681 aacactaccatcaatttcccattgcttgtgaaaaggaagaatccaaatgttggc 36062734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 36931892 - 36931855
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagc 261  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  36931892 cacgatttctctgttcttccaaaccacaaatttgaagc 36931855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 11916493 - 11916453
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  11916493 cacgatttctctgttctttcaaaccacaaatttgaagccaa 11916453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 260
Target Start/End: Complemental strand, 29720152 - 29719978
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctc 185  Q
    ||||||||||||||||  || ||||||| ||||||||| |  ||||||||||||||||||||   ||||| |||||||| ||  || ||| || ||||||    
T  29720152 tgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagac-tagctc 29720054  T
Q  186 actgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    || ||  | |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| |||||||||||||||    
T  29720053 acggcaccacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29719978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 16409152 - 16409086
Alignment:
Q  198 atcgtgtcacgattgccaaat-cgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||||||||||| ||||||| || | ||||||| |||||||||| || |||||||||||||||||||    
T  16409152 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 16409086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 24136338 - 24136373
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    |||||||||||||||||||| |||||||||||||||    
T  24136338 aaatcgtgtcacgatttcccaagatcgtgtcacgat 24136373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 43625608 - 43625643
Alignment:
Q  232 ctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||||||||| ||||||||||||||||||||||    
T  43625608 ctctgttcttccagaccacaaatttgaagccaatat 43625643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 15465050 - 15465116
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||||||||||||  | || ||| | ||||||| |||||||||| || |||||||||||||||||||    
T  15465050 atcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 15465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 9352972 - 9352916
Alignment:
Q  108 acttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||||   ||||||||||||||||| ||   ||||||||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgattt 9352916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 10593083 - 10593044
Alignment:
Q  32 gaaatcgtgtcacgatttccctagatcgtgtcacgatctgc 72  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  10593083 gaaatcgtgtcacgatttccc-aaatcgtgtcacgatctgc 10593044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 16409262 - 16409186
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||| | |||| ||||| ||| ||||    
T  16409262 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaattt 16409186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 35388197 - 35388233
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  35388197 cacgatttctctgttcttccagaccacaaatttgaag 35388233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 35745724 - 35745980
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  35745724 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcatagatacttaaccag 35745823  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||    
T  35745824 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctcacggcatctccgatcgtgtcacgattgccaaa 35745923  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacat 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35745924 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 35745980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 25 - 265
Target Start/End: Complemental strand, 39784572 - 39784332
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||    
T  39784572 ccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccaacaagttt 39784473  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgcgac 224  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||||| | |    
T  39784472 ctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtc 39784373  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  39784372 acgatttctctgttcttccagaccacaaatttgaagccaat 39784332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 10683993 - 10683744
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||    
T  10683993 agtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaacgag 10683894  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgc-ctctccgatcgtgtcacgattgccaa 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| || |  |   |||||||||||||  | ||    
T  10683893 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgccaaa 10683795  T
Q  217 atcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  10683794 atcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 10683744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 25327911 - 25327669
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||  ||||||| |||||||||||| |||||||||| |||||||||    
T  25327911 ccctgaagaaatcgtgccacgatttccctagatcgtgtcacgagctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagttt 25327812  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcga 223  Q
    ||||||||||||||||||||||||| |||||||| ||||| || ||| |||||| |||||||| ||| | |   |||||| |||||   | |||||| |     
T  25327811 ctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaac-tagctcacagccacttgaaatcgtgccacgaagccaaaatcgtgt 25327713  T
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  25327712 cacgatttctctgttcttccagaccacaaatttgaagccaatat 25327669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 4759778 - 4759539
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||  | || ||  ||| ||||||||||||||||  |||||||||| ||||||||||    
T  4759778 ctgaagaaatcgtgtcacgatttcc--agatcgtgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttc 4759681  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaatcgcgac 224  Q
    | |||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||  |||   |||||||||||||  | |||||| | |    
T  4759680 taaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtc 4759582  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  4759581 acgatttctctgttcttccagaccacaaatttgaagccaatat 4759539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 87 - 267
Target Start/End: Original strand, 36979829 - 36980009
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| || ||| |||||| |||||||    
T  36979829 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaac-tagctca 36979927  T
Q  187 ctgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    | ||  |||   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  36979928 cggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 36980009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 27 - 266
Target Start/End: Original strand, 6311690 - 6311929
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||| ||| |||||||||||   ||||||||||||| |||| | | |||  ||||||| ||||||||| || |||||||||| |||||||||||    
T  6311690 ctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggttgacaagtccttattagtgatacttaacgagcaagtttct 6311789  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgc-ctctccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| || |  |   |||||||||||||  | |||||| | ||    
T  6311790 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtca 6311888  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaata 266  Q
     |||| ||||||||||||| |||||||||||||||||||||    
T  6311889 tgatttctctgttcttccagaccacaaatttgaagccaata 6311929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 18852871 - 18852632
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||| ||||||| ||||||||||  | |||||||||||||||||  | | |||  ||| ||||||||||||||||| |||||||||| ||||||||||    
T  18852871 ctgaagcaatcgtgccacgatttcc--aaatcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttc 18852774  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgc-ctctccgatcgtgtcacgattgccaaatcgcgac 224  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| || |  |   |||||||||||||  | ||||||   |    
T  18852773 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatc 18852675  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  18852674 acgatttctctgttcttccagaccacaaatttgaagccaatat 18852632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 30656038 - 30656277
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggtt-gaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||| ||||||| ||||||||||  ||||||||||||||| |||  | | |||  |||| |||||||||||||||  |||||||||| ||||||||||    
T  30656038 ctgaagcaatcgtgccacgatttcc--agatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttc 30656135  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgc-ctctccgatcgtgtcacgattgccaaatcgcgac 224  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| || |  |   |||||||||||||  | |||||| | |    
T  30656136 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtc 30656234  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  30656235 acgatttctctgttcttccagaccacaaatttgaagccaatat 30656277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 18870265 - 18870026
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||| ||||||| |||||||| |  | |||||||||||||||||  | | |||  ||| |||||||||||||| || |||||||||| ||||||||||    
T  18870265 ctgaagcaatcgtgccacgattttc--aaatcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttattagtgatacttaacgagcaagtttc 18870168  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgac 224  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||| ||||||||  | || |   |||||||||||||  | |||||| | |    
T  18870167 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtc 18870069  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  18870068 acgatttctctgttcttccagaccacaaatttgaagccaatat 18870026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 7289673 - 7289432
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||||||| ||||||||||| ||||||||||||||| |||| | |  ||  ||| ||| |||||||||||| |||||||||| |||||||||||    
T  7289673 ctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgatccaaggtagacaagtccttatcagggatacttaacgagcaagtttct 7289574  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctca---ctgcctctccgatcgtgtcacgattgccaaatcgcga 223  Q
    ||||||||||||||||| ||||| ||||| |||||||| || ||| |||||| |||||||   || ||| |   |||||||||||||  | |||||| |     
T  7289573 gaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaac-tagctcatggctccct-tgaaatcgtgtcacgatgccaaaatcgtgt 7289476  T
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||| ||| ||||||||||||| ||||||||||||||| ||||||    
T  7289475 cactatttctctgttcttccagaccacaaatttgaagtcaatat 7289432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 87 - 267
Target Start/End: Complemental strand, 33037472 - 33037292
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||| ||||| |||||||| || ||| |||||| |||||||    
T  33037472 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac-tagctca 33037374  T
Q  187 ctgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    | ||  |||   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  33037373 cggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 33037292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 10688844 - 10688692
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||| ||| |||||||||||   ||||||||||||| |||| | | |||  ||||||| ||||||||| || |||||||||| |||||||||||    
T  10688844 ctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggttgacaagtccttattagtgatacttaacgagcaagtttct 10688745  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  10688744 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 10688692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 33 - 264
Target Start/End: Complemental strand, 1261655 - 1261423
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacg---gtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttctga 128  Q
    |||||||||||||||||||  ||||||||||||||| || ||||   |||||  ||| ||||||||||||||||  |||||||||| |||||||||   |    
T  1261655 aaatcgtgtcacgatttcc--agatcgtgtcacgatttg-aacgtatgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaa 1261559  T
Q  129 atcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacac 226  Q
    ||||||||||||||||||||| ||||| |||||||| ||  || |||||| |||||||| || || |   |||||||||||| ||||||| ||| | | |    
T  1261558 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-tagctcacggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcgc 1261461  T
Q  227 gattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||| || ||||||||||||||||||||||||| ||||    
T  1261460 gatttctgtgttcttccaaaccacaaatttgaaaccaa 1261423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 3439271 - 3439095
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||||||||  ||||| |||||||||||  || || ||| ||||||||    
T  3439271 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgc-aacctagctcac 3439174  T
Q  188 tgcctctccg--atcgtgtcacgattgcca-aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     | | | |||  |||||||||||| ||||| ||||| | ||||||| ||||||||||||||||||||||||||||| ||||    
T  3439173 -ggcaccccgaaatcgtgtcacga-tgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaat 3439095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 42575724 - 42575902
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || ||||    
T  42575724 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactca 42575823  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    | || ||    |||||||| ||||  | |||||| | ||||||| | ||||||||||||||||||||||||||| ||||    
T  42575824 cggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 42575902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 7412877 - 7412952
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||||||||||  | |||||| | ||||||| ||||||||||||||||||||||||||||| |||  |||||||    
T  7412877 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 25689725 - 25689646
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgc 167  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||| |||||||||||   |||||||||||||||||    
T  25689725 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgc 25689646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 5702009 - 5701959
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 260
Target Start/End: Original strand, 26288332 - 26288504
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   ||| |||||||||||||||||| | ||| |||||||| ||  || ||||||  |||||||    
T  26288332 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaac-cagctcac 26288430  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     || || |   ||| |||||||| ||||||| ||| | ||||||| ||||||||||||| |||||||||||||||    
T  26288431 ggcatcacaaaatcatgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 260
Target Start/End: Original strand, 26301589 - 26301761
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   ||| |||||||||||||||||| | ||| |||||||| ||  || ||||||  |||||||    
T  26301589 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaac-cagctcac 26301687  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     || || |   ||| |||||||| ||||||| ||| | ||||||| ||||||||||||| |||||||||||||||    
T  26301688 ggcatcacaaaatcatgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 260
Target Start/End: Original strand, 26313583 - 26313755
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   ||| |||||||||||||||||| | ||| |||||||| ||  || ||||||  |||||||    
T  26313583 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaac-cagctcac 26313681  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     || || |   ||| |||||||| ||||||| ||| | ||||||| ||||||||||||| |||||||||||||||    
T  26313682 ggcatcacaaaatcatgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 265
Target Start/End: Complemental strand, 15290327 - 15290150
Alignment:
Q  89 accagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    ||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || |||||    
T  15290327 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 15290228  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||| | ||  | |||||| | ||||||| | ||||||||||||||||||||||||||| ||||    
T  15290227 ggcatccgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 15290150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 265
Target Start/End: Complemental strand, 15470696 - 15470519
Alignment:
Q  89 accagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    ||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || |||||    
T  15470696 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 15470597  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||| | ||  | |||||| | ||||||| | ||||||||||||||||||||||||||| ||||    
T  15470596 ggcatccgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 15470519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 10688675 - 10688623
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 10688623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 2627503 - 2627327
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    ||||| |||||||||  || ||||||| |||||||||   |||||||||||||||||||||  ||||| |||||||| ||  |  ||||||  |||||||    
T  2627503 gaccaatccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaac-cagctcac 2627405  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     |  || |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| |||||||||||||||||||    
T  2627404 ggaatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 2627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 4456575 - 4456633
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| || |||||||||||||||||||||||||||||| || |||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaaatacaaca 4456633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 19175282 - 19175233
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||||| |||||||||  |||||||||||||||| |||||||||||||||    
T  19175282 aaatcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaa 19175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 25689618 - 25689568
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||| ||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaat 25689568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 33037431 - 33037397
Alignment:
Q  34 aatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    ||||||||||||||||||| |||||||||||||||    
T  33037431 aatcgtgtcacgatttcccaagatcgtgtcacgat 33037397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 23799139 - 23799099
Alignment:
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| |||||||||| ||||||||||||||||| |||||    
T  23799139 acgatttctctgttctttcaaaccacaaatttgaaaccaat 23799099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 218; Significance: 1e-120; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 18918 - 18661
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||||||||    
T  18918 agtcctgccctgaagaaatcgtgccacgatttccttagatcgtgtcacgatttgcaacggtccccaggatgaccagtctttatcagagatacttaaccag 18819  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18818 caagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 18719  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  18718 tcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacatt 18661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 14038 - 13791
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  14038 agtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccag 13939  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||    
T  13938 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaaaa 13839  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||||||||||||| ||||||||| ||||||||| ||||    
T  13838 tcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 13791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 19344755 - 19345012
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19344755 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcatgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccag 19344854  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  19344855 caagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttggctcacggcatctccgatcgtatcacgattgccaaa 19344954  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19344955 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatt 19345012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 19349613 - 19349868
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||     
T  19349613 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtcctcaggttgaccagtccttatcagagatacttaaccaa 19349712  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  19349713 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaa 19349812  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  19349813 ttgcgacacgattcctctgttcttccaaaccacaaatttgaaaccaattttcaaca 19349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 39811722 - 39811482
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||  ||  ||| |||||||||||| ||||||||||||||||||||||    
T  39811722 ctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttct 39811623  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||||| ||| || | | | |   |||||||||||||  | |||||| | ||    
T  39811622 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactt-gcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtca 39811524  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  39811523 cgatttctctgttcttccagaccacaaatttgaagccaatat 39811482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 32247119 - 32247347
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| ||    
T  32247119 agtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtctttatcagtgatacttaacgag 32247218  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    ||||||||||||||||| |||||                     |||||| |||||||||||| |||||| || ||||  |||||||||||||| | |||    
T  32247219 caagtttctgaatcgtgccacga---------------------ttttgcatccagcaaacttggctcacggcatctcaaatcgtgtcacgattccaaaa 32247297  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  32247298 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 32247347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 14291881 - 14292120
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||||||||||| ||||||||||  ||||||||||||||| |||      |||  ||| ||||||||||||||||| | |||||||| ||||||||||    
T  14291881 ctgaagaaatcgtgccacgatttcc--agatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcagtggtacttaacgagcaagtttc 14291978  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaatcgcgac 224  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||  |||  ||||||||||||||  | |||||| | |    
T  14291979 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgagatcgtgtcacgatgccaaaatcgtgtc 14292077  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  14292078 acgatttctctgttcttccagaccacaaatttgaagccaatat 14292120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 9296106 - 9295867
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||| |||||||||||||||| |  ||||||||||||||| |||  | | |||  ||| ||||||||||||||||  |||||||||  ||||||||||    
T  9296106 ctgaagcaatcgtgtcacgattttc--agatcgtgtcacgatttgcgtccgacccaaggtatgaccagtccttatcaaggatacttaatgagcaagtttc 9296009  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgc-ctctccgatcgtgtcacgattgccaaatcgcgac 224  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| || |  |   |||||||||||||  | |||||| | |    
T  9296008 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtc 9295910  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  9295909 acgatttctctgttcttccagaccacaaatttgaagccaatat 9295867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 11098631 - 11098392
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggtt-gaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||||||||||| ||||||||||  ||||||||||||||| |||      |||  |||| |||||||||||||||| |||||||||| ||||||||||    
T  11098631 ctgaagaaatcgtgccacgatttcc--agatcgtgtcacgatttgcgtacaacccaaggtttgaccagtccttatcagtgatacttaacgagcaagtttc 11098534  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgc-ctctccgatcgtgtcacgattgccaaatcgcgac 224  Q
    | |||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| || |  |   |||||||||| ||  | |||||| | |    
T  11098533 taaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcactatgccaaaatcgtgtc 11098435  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  11098434 acgatttctctgttcttccagaccacaaatttgaagccaatat 11098392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 12647783 - 12647960
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||| || |||||||||||||||||||   ||||||||||||||     || |||| | ||||||||    
T  12647783 gaccagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 12647882  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  12647883 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 12647960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 273
Target Start/End: Original strand, 25410081 - 25410266
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    ||||| |||||||||  |||||||||| |||||||||   |||||||||||||||||||||| ||||| |||||||| ||  || ||||||  | |||||    
T  25410081 gaccattccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-catctcac 25410179  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| ||||||||||||| ||||||||||||||||||| | ||||||    
T  25410180 ggcatcacaaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaaactcaaca 25410266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 264
Target Start/End: Original strand, 3492212 - 3492368
Alignment:
Q  108 acttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtca 206  Q
    ||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||    
T  3492212 acttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtca 3492310  T
Q  207 cgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||| ||||||| ||| | ||| ||| |||||||||| || |||||||||||||||||||    
T  3492311 cga-tgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaa 3492368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 260
Target Start/End: Original strand, 4484738 - 4484910
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    ||||||||||||||| ||| ||||||| |||||||||   ||||||||||||||| |  ||| ||||| |||||||| ||  || |||||| ||||||||    
T  4484738 gaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaac-tagctcac 4484836  T
Q  188 tgcctc-tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| ||||||||||||| |||||||||||||||    
T  4484837 ggcatcatgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 32289333 - 32289157
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||| | |||| ||||| || ||||| ||  || ||||||  |||||||    
T  32289333 gaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaacc-agctcac 32289235  T
Q  188 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || || |  | |||||||||||| ||||||| || | ||||||| ||||||||||||| |||||||||||||||||||    
T  32289234 ggcatcacaaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 8389681 - 8389624
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaac 272  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaac 8389624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 264
Target Start/End: Complemental strand, 30833086 - 30832930
Alignment:
Q  108 acttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccga-tcgtgtca 206  Q
    ||||||| |||||||||   |||||||||||||||||||||| ||||| |||||||| ||  || ||||||  ||||||| || || |  | ||||||||    
T  30833086 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacgaaatcgtgtca 30832988  T
Q  207 cgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||  | || ||  | ||||||| ||||||||||||| |||||||||||||||||||    
T  30832987 cgatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30832930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 44310545 - 44310476
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  44310545 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 44310476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 10706783 - 10706724
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacat 274  Q
    |||||| | ||||||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaatatacaacat 10706724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 20522797 - 20522838
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  20522797 cacgatttctctgttcttccaaaccacaaatttgaagccaat 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 33528146 - 33528105
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  33528146 cacgatttctctgttcttccaaaccacaaatttgaagccaat 33528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 36757475 - 36757419
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaa 271  Q
    |||||| | |||||||  ||||||||||||||||||||||||||||||||| |||||    
T  36757475 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaattttcaa 36757419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 39483443 - 39483503
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||| | ||| ||| |||||||||||||||||||||||||||||||||||  |||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaataaacaacatt 39483503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 21630511 - 21630562
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaata 266  Q
    |||||| | ||||||| |||||||||||||||| ||||||||||||||||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaata 21630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 23078002 - 23077944
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| |||||||||||||||||| || |||||||||||||| |||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaatatgcaaca 23077944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 28258727 - 28258669
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| ||||||| |||||||||||||||||||||||||  |||||||    
T  28258727 aaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaaca 28258669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 13569914 - 13569955
Alignment:
Q  233 tctgttcttccaaaccacaaatttgaagccaatattcaacat 274  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  13569914 tctgttctttcaaaccacaaatttgaagccaatatacaacat 13569955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 25410120 - 25410155
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    |||||||||||||||||||| |||||||||||||||    
T  25410120 aaatcgtgtcacgatttcccaagatcgtgtcacgat 25410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 30833067 - 30833032
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    |||||||||||||||||||| |||||||||||||||    
T  30833067 aaatcgtgtcacgatttcccaagatcgtgtcacgat 30833032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 40739382 - 40739448
Alignment:
Q  198 atcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||||||||||| ||||||| ||| | |||||||  |||||||||||| |||||||||||||||||||    
T  40739382 atcgtgtcacga-tgccaaattcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaa 40739448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 3492232 - 3492266
Alignment:
Q  34 aatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    ||||||||||||||||||| |||||||||||||||    
T  3492232 aatcgtgtcacgatttcccaagatcgtgtcacgat 3492266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 28258815 - 28258759
Alignment:
Q  108 acttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||||   ||||||||||||||||| |||  | ||||||||||||    
T  28258815 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgattt 28258759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 1993 - 1746
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  1993 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccag 1894  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  1893 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaa 1794  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  1793 tcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 148698 - 148451
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  148698 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccag 148599  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  148598 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaa 148499  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  148498 tcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 148451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 43988203 - 43987948
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||    
T  43988203 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccag 43988104  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  43988103 caagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattttgcttccagcaaacttggctcactgcctctctgatcgtgtcacgattgccaaa 43988004  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  43988003 tcgcgacacgattcctctgctctcccaaaccacaaatttgaagccaattttcaaca 43987948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 44023631 - 44023375
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  44023631 agtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccag 44023532  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||    
T  44023531 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaa 44023432  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    ||| | ||||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  44023431 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat-ttcaacatt 44023375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 25439653 - 25439406
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  25439653 agtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacagtccccaggttgaccagtccttatcagagatacttaaccag 25439554  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||| || ||||  |||||||||||||| |||||    
T  25439553 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctcacggcatctcaaatcgtgtcacgattaccaaa 25439454  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  25439453 tcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 1054768 - 1054513
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||    
T  1054768 agtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaactag 1054669  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||||||| |||||| ||  |||| ||||| |||||||| | |||    
T  1054668 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcacggcacctccaatcgtatcacgattccaaaa 1054569  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacat 274  Q
    ||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  1054568 tcgtgacacgatttctctgttcttccagaccacaaatttgaagccaat-ttcaacat 1054513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 25444846 - 25444599
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||     
T  25444846 agtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccctaggttgaccagtccttatcagagatacttaaccaa 25444747  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||| |||  ||||||| |||||| || ||||  |||||||||||||| |||||    
T  25444746 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctcacggcatctcaaatcgtgtcacgattaccaaa 25444647  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  25444646 tcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 39445828 - 39446075
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||    
T  39445828 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaacgag 39445927  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||| || ||| |||||||| |||||| || ||||  |||||||||||||| | |||    
T  39445928 caagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcacggcatctcaaatcgtgtcacgattccaaaa 39446027  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  39446028 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 39446075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 25 - 264
Target Start/End: Original strand, 41390939 - 41391177
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||  |||||||||    
T  41390939 ccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcagcggaccccaggttgaccagtccttatcagtgatacttaatgagcaagttt 41391038  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgcgac 224  Q
    ||||||| ||||||||||||||||| |||||||||||||| || ||| |||||| | |||||| || ||||  |||||||||||||| | |||||| | |    
T  41391039 ctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtc 41391137  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  41391138 acgatttctctgttcttccagaccacaaatttgaagccaa 41391177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 41398594 - 41398779
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||  |||||||||  |||||||||    
T  41398594 ccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcagcggaccccaggttgaccagtccttatcaatgatacttaatgagcaagttt 41398693  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgatt 211  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||| |||||| | |||||| || ||||  ||||||||||||||    
T  41398694 ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacggcatctcaaatcgtgtcacgatt 41398779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 24787069 - 24786918
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggtt-gaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||| ||||||| ||||||||||  ||||||||||||||| |||  | | |||  |||| |||||||||||||||  |||||||||| ||||||||||    
T  24787069 ctgaagcaatcgtgccacgatttcc--agatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttc 24786972  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  24786971 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 24786918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 24793891 - 24793740
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggtt-gaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||| ||||||| ||||||||||  ||||||||||||||| |||  | | |||  |||| |||||||||||||||  |||||||||| ||||||||||    
T  24793891 ctgaagcaatcgtgccacgatttcc--agatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttc 24793794  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  24793793 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 24793740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 44203402 - 44203225
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| ||||||||||||||| || |  ||||||||||||||     || |||| | ||||||||    
T  44203402 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 44203303  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     ||  |||| |||||||||||||| | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  44203302 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 44203225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 260
Target Start/End: Original strand, 20622635 - 20622808
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    ||||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||   ||||| |||||||| ||  || ||| || |||||||    
T  20622635 tgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagac-tagctca 20622733  T
Q  187 ctgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    | ||  | |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| |||||||||||||||    
T  20622734 cggcaccacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 20622808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 264
Target Start/End: Complemental strand, 51765176 - 51764999
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    ||||||||||||||||  || ||||||| |||||||||   ||||||||||||||| | |||| ||||| |||||||| ||  || ||||||  ||||||    
T  51765176 tgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaac-cagctca 51765078  T
Q  187 ctgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    | || || |   |||||||||||||  | || ||| | ||||||| ||||||||||||| ||||||||||| |||||||    
T  51765077 cggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaa 51764999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 264
Target Start/End: Complemental strand, 19361077 - 19360921
Alignment:
Q  108 acttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtca 206  Q
    ||||||| |||||||||   |||||||||||||||||||||| ||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||    
T  19361077 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtca 19360979  T
Q  207 cgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||  | || ||| | ||||||| |||||||||| || |||||||||||||||||||    
T  19360978 cgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 19360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 13598967 - 13599017
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 13599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 37070334 - 37070392
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaattttcaaca 37070392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 21536170 - 21536121
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||    
T  21536170 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21536121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 26644422 - 26644381
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  26644422 cacgattcctctgttcttccaaaccacaaatttaaagccaat 26644381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 9036187 - 9036010
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||  |||  | ||| ||||| |||||  || |||| || |||||||    
T  9036187 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacct-agctcac 9036089  T
Q  188 tgcctctccga--tcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     ||  | ||||  ||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  9036088 ggcacc-ccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 9036010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 9987026 - 9986894
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgatc--tgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttctgaa 129  Q
    |||| ||||||||||||||  |||||||||||||||   |||| | |||||  ||| |||||||||||||| |  || ||||||| |||||||||   ||    
T  9987026 aaattgtgtcacgatttcc--agatcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttattatggaaacttaacgagcaagtttgcaaa 9986929  T
Q  130 tcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||||||  ||||| ||||||||    
T  9986928 tcgtgtcacgatttcccaaaatcgtgtcacgattt 9986894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 260
Target Start/End: Complemental strand, 19365931 - 19365781
Alignment:
Q  110 ttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacg 208  Q
    ||||| |||||||||   |||||||||||||||||||||| ||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||||    
T  19365931 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtcacg 19365833  T
Q  209 attgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    | ||||||| ||| | ||||||| |||||||||| || |||||||||||||||    
T  19365832 a-tgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 19365781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 24793723 - 24793671
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 24793671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 24202326 - 24202260
Alignment:
Q  198 atcgtgtcacgattgccaaat-cgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||||||||||| ||||||| || | ||||||| ||||||||||||| |||||||||||||||||||    
T  24202326 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 13604144 - 13604108
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    ||||||| |||||||||||||||||||||||||||||    
T  13604144 cacgatttctctgttcttccaaaccacaaatttgaag 13604108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 24202416 - 24202360
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgattt 143  Q
    ||||||||||||||||  |||||||||| |||||||||   ||||||||||||||||    
T  24202416 tgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattt 24202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 13659849 - 13659892
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||| |||||||  |||||||||||||||||||||||||||    
T  13659849 cacgatttctctgtttctccaaaccacaaatttgaagccaatat 13659892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 19361058 - 19361023
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    |||||||||||||||||||| |||||||||||||||    
T  19361058 aaatcgtgtcacgatttcccaagatcgtgtcacgat 19361023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 19365914 - 19365879
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    |||||||||||||||||||| |||||||||||||||    
T  19365914 aaatcgtgtcacgatttcccaagatcgtgtcacgat 19365879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 3282273 - 3282331
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | |||||||  ||||||||||| ||||||||||||||||||||  |||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaaca 3282331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 21053726 - 21053648
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    ||||||||||||||||  || ||||||| ||||||||| |  ||||||||||||||||||||   ||||| ||||||||    
T  21053726 tgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgattt 21053648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 16124229 - 16124188
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||||||| ||||||||||||||||||||||||| || |||||    
T  16124229 cacgatttctctgttcttccaaaccacaaatttaaaaccaat 16124188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 264
Target Start/End: Complemental strand, 2672673 - 2672427
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2672673 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccag 2672574  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| | || |||||||||||||||||||| | |||    
T  2672573 caagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcccggcatctccgatcgtgtcacgattacaaaa 2672474  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  2672473 tcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2672427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 24968450 - 24968697
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||| |||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  24968450 agtcttgccctgaagaaatcgtgccacgatttccctagatcgtggcacgatttgcaacggtccccaggttgaccagtccttatcagagaaacttaaccag 24968549  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  24968550 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaa 24968649  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| |||||||||||| |||||||||||||||| ||||||||| ||||    
T  24968650 tcgtgacacgattcctttgttcttccaaaccactaatttgaagtcaat 24968697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 8512573 - 8512820
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  8512573 agtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccag 8512672  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||    
T  8512673 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaaaa 8512772  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||||||||||||| ||||||||| ||||||||| ||||    
T  8512773 tcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 8512820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 18 - 264
Target Start/End: Complemental strand, 2676829 - 2676583
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  2676829 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagattcttaaccag 2676730  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| |  | |||||||||||||||||||| | |||    
T  2676729 caagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcccgacatctccgatcgtgtcacgattacaaaa 2676630  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  2676629 tcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2676583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 8517453 - 8517700
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  8517453 agtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccag 8517552  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||    
T  8517553 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaaaa 8517652  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||||||||||||| | ||||||| ||||||||| ||||    
T  8517653 tcgtgacacgattcctctgttctcctaaaccactaatttgaagtcaat 8517700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 32475817 - 32476074
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||  | |||||||||||||||||||||||||||||||    
T  32475817 agtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaagatgaccagtccttatcagagatacttaaccag 32475916  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||  ||||| |||||||||||| | |||||||||||||| ||||||    
T  32475917 caagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcactgcctccctgatcgtgtcacgatggccaaa 32476016  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  32476017 tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatcttcaacatt 32476074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 32480675 - 32480930
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||||| |||||||||||||  | |||||||||||||||||||||||||||||||    
T  32480675 agtcctgcctagaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaagatgaccagtccttatcagagatacttaaccag 32480774  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||  ||||| |||||||||||| | |||||||||||||| ||||||    
T  32480775 caagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcactgcctccctgatcgtgtcacgatggccaaa 32480874  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  32480875 tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatcttcaaca 32480930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 18656774 - 18657024
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  18656774 agtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccag 18656873  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaa 216  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||| || ||| ||||||||   |||| ||  | |   |||||||||||||  | ||    
T  18656874 caagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgccaaa 18656973  T
Q  217 atcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||| | || |||| |||||||||| || ||||||||||||||||||||||    
T  18656974 atcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatat 18657024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 33 - 267
Target Start/End: Complemental strand, 22172900 - 22172667
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcg 132  Q
    |||||||| ||||||||||| | ||||||||||||| ||||||||  ||  |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  22172900 aaatcgtgccacgatttcccaa-atcgtgtcacgatttgcaacggaaccaaggttgaccagtccttatcagagatccttaacgagcaagtttctgaatcg 22172802  T
Q  133 tgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgattc 231  Q
    ||||||||||||||||| |||||||||||||| || ||| |||||| | |||||| ||  |||   |||||||||||||  | |||||| | |||||||     
T  22172801 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 22172703  T
Q  232 ctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||||||||| ||||||||||||||||||||||    
T  22172702 ctctgttcttccagaccacaaatttgaagccaatat 22172667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 28503564 - 28503324
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||| ||||||| ||||||||||| ||||||||||||||| |||  | | |||  ||||||| |||||||||||| |||||||||| |||||||||||    
T  28503564 ctgaagcaatcgtgccacgatttcccaagatcgtgtcacgatttgcgtctgacccaaggttgacaagtccttatcagggatacttaacgagcaagtttct 28503465  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    |||| |||||||||||||||||| |||||||||||||| || |||||||||| |||||||| ||| | |   |||||||||||||  | |||||| | ||    
T  28503464 gaattgtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtca 28503366  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| |||||||||||||  |||||||||||||||||||||    
T  28503365 cgatttctctgttcttccaggccacaaatttgaagccaatat 28503324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 40372500 - 40372261
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||||||||||||||||||||||  |||||||| |||||| |||  | || ||| ||| ||||||||||||||||  |||||||||| ||||||||||    
T  40372500 ctgaagaaatcgtgtcacgatttcc--agatcgtggcacgatttgcgtccgttcccaggtatgaccagtccttatcaaggatacttaacgagcaagtttc 40372403  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaatcgcgac 224  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||  |||   |||||||||||||  | |||||| | |    
T  40372402 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtc 40372304  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  40372303 acgatttctctgttcttccagaccacaaatttgaagccaatat 40372261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 28501397 - 28501157
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||| ||||||| ||||||||||| ||||||||||| ||| |||  | | |||  ||||||| |||||||||||| |||||||||| |||||||||||    
T  28501397 ctgaagcaatcgtgccacgatttcccaagatcgtgtcatgatttgcgtctgacccaaggttgacaagtccttatcagggatacttaacgagcaagtttct 28501298  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||| ||||| |||||||||||||| |  ||| |||||| |||||||| ||| | |   |||||||||||||  | |||||| | ||    
T  28501297 gaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtca 28501199  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| |||||||||||||  |||||||||||||||||||||    
T  28501198 cgatttctctgttcttccaggccacaaatttgaagccaatat 28501157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 27 - 265
Target Start/End: Original strand, 8477758 - 8477995
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||| ||||||||||||||||||  ||||||||||||||| |||      |||  ||| ||||||||||||||||  |||||||||| ||||||||||    
T  8477758 ctgaagcaatcgtgtcacgatttcc--agatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttc 8477855  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaatcgcgac 224  Q
    | |||||||||||||||||||||| |||||||||||||| || |||||||||| |||||||| ||  |||   |||||||||||||  | |||||| | |    
T  8477856 tcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaac-tagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtc 8477954  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    || ||| ||||||||||||| ||||||||||||||||||||    
T  8477955 acaatttctctgttcttccagaccacaaatttgaagccaat 8477995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 267
Target Start/End: Original strand, 7167697 - 7167877
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||    
T  7167697 tgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctca 7167795  T
Q  187 ctgc-ctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    | || |  |   || ||||||||||  | |||||| | ||||||| ||||||||||||| | ||||||||||||||||||||    
T  7167796 cggcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaatat 7167877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 27352325 - 27352189
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||| ||||||| ||||||||||  | ||||||||||||| |||  | |||||  ||| ||||||||||||||||| |||| ||||| ||||||||||    
T  27352325 ctgaagcaatcgtgccacgatttcc--aaatcgtgtcacgatttgcgtccgtcccaaggtatgaccagtccttatcagtgataattaacgagcaagtttc 27352228  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  27352227 tgaatcgtgtcacgatttcccaagatcgtgccacgattt 27352189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 8738767 - 8738616
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||| ||||||| ||||||||||  ||||| ||||||||| |||  | || ||  ||| ||||||||||||||||  |||||||||| ||||||||||    
T  8738767 ctgaagcaatcgtgccacgatttcc--agatcatgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttc 8738670  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  8738669 tgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaact 8738616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 9091005 - 9090854
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||| ||||||| ||||||||||  ||||| ||||||||| |||  | || ||  ||| ||||||||||||||||  |||||||||| ||||||||||    
T  9091005 ctgaagcaatcgtgccacgatttcc--agatcatgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttc 9090908  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  9090907 tgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaact 9090854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 2671250 - 2671158
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    ||||||||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  2671250 tgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaact 2671158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 54634894 - 54634717
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||   |||||||||||||||||  || || ||||||||||||    
T  54634894 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgc-aacttagctcac 54634796  T
Q  188 tgcctctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     | | | |||  |||||||||| ||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  54634795 -ggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 54634717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 4598922 - 4599100
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttccca-aggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  ||||||||||||||||||| |  ||||||||||||||     || |||| | |||||||    
T  4598922 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctca 4599021  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    | || ||    |||||||| ||||  | |||||| | ||||||| | ||||||||||||||||||||||||||| ||||    
T  4599022 cggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 4599100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 4601143 - 4601321
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttccca-aggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  ||||||||||||||||||| |  ||||||||||||||     || |||| | |||||||    
T  4601143 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctca 4601242  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    | || ||    |||||||| ||||  | |||||| | ||||||| | ||||||||||||||||||||||||||| ||||    
T  4601243 cggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 4601321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 6716269 - 6716092
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||   ||||| |||||||||||  || || ||| ||||||||    
T  6716269 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgc-aacctagctcac 6716171  T
Q  188 tgcctctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     | | | |||  |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||| ||| ||||    
T  6716170 -ggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaat 6716092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 36029659 - 36029719
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  36029659 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaacatt 36029719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 10055990 - 10055817
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || ||||    
T  10055990 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10055891  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    | || ||    |||| ||||||||  | |||||| | ||||||| | |||||||||||||||||||||||||||    
T  10055890 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10055817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 10058212 - 10058039
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || ||||    
T  10058212 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10058113  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    | || ||    |||| ||||||||  | |||||| | ||||||| | |||||||||||||||||||||||||||    
T  10058112 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 10060434 - 10060261
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || ||||    
T  10060434 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10060335  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    | || ||    |||| ||||||||  | |||||| | ||||||| | |||||||||||||||||||||||||||    
T  10060334 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10060261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 10062656 - 10062483
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || ||||    
T  10062656 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10062557  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    | || ||    |||| ||||||||  | |||||| | ||||||| | |||||||||||||||||||||||||||    
T  10062556 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 10064878 - 10064705
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || ||||    
T  10064878 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10064779  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    | || ||    |||| ||||||||  | |||||| | ||||||| | |||||||||||||||||||||||||||    
T  10064778 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10064705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 10067100 - 10066927
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || ||||    
T  10067100 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10067001  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    | || ||    |||| ||||||||  | |||||| | ||||||| | |||||||||||||||||||||||||||    
T  10067000 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10066927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 25637197 - 25637121
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||   ||||||||||||||    
T  25637197 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattt 25637121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 30709316 - 30709264
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 30709264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 39032075 - 39032015
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||| | ||||||| |||||||||||||||| ||||||||||||||||| |||||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaacatt 39032015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 6718453 - 6718374
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgc 167  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||   ||||| |||||||||||    
T  6718453 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgc 6718374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 10208963 - 10208785
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||||||||| ||||||||  ||||||||||||||     || |||| | || ||||    
T  10208963 gaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactca 10208864  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    | || ||    |||| ||||||||  | |||||| | || |||| | ||||||||||||||||||||||||||| ||||    
T  10208863 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagacaat 10208785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 10211163 - 10210985
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| |||||||||||  ||||||||| || ||||||||  ||||||||||||||     || |||| | || ||||    
T  10211163 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactca 10211064  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    | || ||    |||| ||||||||  | |||||| | ||||||| | ||||||||||||||||||||||| ||| ||||    
T  10211063 cggcatcctaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaat 10210985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 16264896 - 16264954
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaatatacaaca 16264954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 21711768 - 21711818
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 27974491 - 27974433
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  27974491 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 37726224 - 37726290
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||||||||||||  | || ||| | ||||||| |||||||||||||||||||||||||||||||||    
T  37726224 atcgtgtcacgatatcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 37726290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 1730957 - 1730916
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  1730957 cacgatttctctgttcttccaaaccacaaatttgaagccaat 1730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 264
Target Start/End: Original strand, 1306439 - 1306595
Alignment:
Q  108 acttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccga--tcgtgtc 205  Q
    ||||||| |||||||||  ||||||||||||||||||||||| ||||| |||||||| ||  || ||||||  ||||||| | | |  |||  |||||||    
T  1306439 acttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac-gacaccacgaaatcgtgtc 1306536  T
Q  206 acgattgccaaat-cgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||| ||||||| |  | ||||||| ||||||||||||| |||| ||||||||||||||    
T  1306537 acgat-gccaaattcatgtcacgatttctctgttcttccagaccataaatttgaagccaa 1306595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 8738590 - 8738547
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  8738590 cacgatttctctgttcttccagaccacaaatttgaagccaatat 8738547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 9090828 - 9090785
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  9090828 cacgatttctctgttcttccagaccacaaatttgaagccaatat 9090785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 23200654 - 23200720
Alignment:
Q  198 atcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||||||||||| ||||||| ||| | ||||||| ||||||||||||| |||||||||||||||||||    
T  23200654 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 26928155 - 26928089
Alignment:
Q  198 atcgtgtcacgattgccaaat-cgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||||||||||| ||||||| || | ||||||| ||||||||||||| |||||||||||||||||||    
T  26928155 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 26928089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 37408111 - 37408045
Alignment:
Q  198 atcgtgtcacgattgcca-aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||||||||||| |||| ||||| | ||||||| || ||||||||||||||||||||||||||||||    
T  37408111 atcgtgtcacgat-gccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 37408045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 23198455 - 23198521
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||||||||||||  | || ||| | ||||||| ||||||||||||| |||||||||||||||||||    
T  23198455 atcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23198521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 27027273 - 27027331
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||| | || |||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtctattttcaaca 27027331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 27038608 - 27038666
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| ||||||| |||||||||||||| ||||||||||| |||||||    
T  27038608 aaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaaca 27038666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 3617218 - 3617041
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||| | ||||||  |||||||||| ||||||||||   ||||||||||||||| || |  ||||| ||||||||     || |||| | ||||||||    
T  3617218 gaccagccgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacgatttgcacccctgcaaccctagctcac 3617119  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  3617118 ggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 3617041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 40592293 - 40592252
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  40592293 cacgatttctccgttcttccaaaccacaaatttgaagccaat 40592252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 40734132 - 40734087
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 35926057 - 35926108
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| | ||||||| ||||||||||||||||| ||||||||||||||||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaatat 35926108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 16498685 - 16498642
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||| |||||||  |||||||||||||||||||||||||||    
T  16498685 cacgatttctctgtttctccaaaccacaaatttgaagccaatat 16498642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 24694697 - 24694654
Alignment:
Q  224 cacgattcctctgttcttccaaa-ccacaaatttgaagccaata 266  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  24694697 cacgatttctctgttcttccaaaaccacaaatttgaagccaata 24694654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 45282750 - 45282695
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgattt 143  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||    
T  45282750 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 45282695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 48438782 - 48438833
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaata 266  Q
    |||||| | ||||||| |||||||||| |||||||||||||| |||||||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaata 48438833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 800870 - 800698
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    ||||| |||||||||  || ||||||| |||||||||   ||||||||||||||||||||   ||||| |||||||| ||  || ||||||  |||||||    
T  800870 gaccattccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaac-cagctcac 800772  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| |||||||||| ||||    
T  800771 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaag 800698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 1306459 - 1306493
Alignment:
Q  34 aatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    ||||||||||||||||||| |||||||||||||||    
T  1306459 aatcgtgtcacgatttcccaagatcgtgtcacgat 1306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 47923368 - 47923326
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaata 266  Q
    ||||||| ||||||| || ||||||||||||||||||||||||    
T  47923368 cacgatttctctgttttttcaaaccacaaatttgaagccaata 47923326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 32143870 - 32143919
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||||| | ||||||| |||||||||| || |||||||||||||||||||    
T  32143870 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 32143919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 27986015 - 27985971
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaa 259  Q
    |||||| | ||||||| ||||||| ||||||||||||||||||||    
T  27986015 aaatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 24265931 - 24265684
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  24265931 agtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccag 24265832  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||    
T  24265831 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaaaa 24265732  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||||||||||||| ||||||||| ||||||||| ||||    
T  24265731 tcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 24265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 16880406 - 16880653
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  16880406 agtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccag 16880505  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||  |||||||||||| | |||||||||||||| || |||    
T  16880506 caagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctccctgatcgtgtcacgatggcaaaa 16880605  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  16880606 tcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaat 16880653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 16885261 - 16885508
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  16885261 agtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccag 16885360  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||  |||||||||||| | |||||||||||||| || |||    
T  16885361 caagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctccctgatcgtgtcacgatggcaaaa 16885460  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  16885461 tcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaat 16885508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 24261075 - 24260828
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||||||||||||||||    
T  24261075 agtcctgtcctgatgaaatcgtgccacgatttccctagatcgtgtcacgattttcaacggtcctcaagttgaccagtccttatcagagatacttaaccag 24260976  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||   |||| |||||||||||| | |||||||||||||| ||||||    
T  24260975 caagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagattacttggctcactgcctccctgatcgtgtcacgatggccaaa 24260876  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24260875 tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 24260828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 18 - 264
Target Start/End: Complemental strand, 21811993 - 21811747
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||||||||||  |||||||| ||||||||||| |||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||| ||    
T  21811993 agtcctgccctgagtaaatcgtgccacgatttcccaagatcgtgacacaatctgcaacggtctccaggttgaccagtccttatcagagatacttaactag 21811894  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||  || |||||| | |||||| || |||| |||||||||||||| || |||    
T  21811893 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctcacggcatctcagatcgtgtcacgatggcaaaa 21811794  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  21811793 tcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 21811747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 24024066 - 24023824
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  24024066 ccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaacgagcaagttt 24023967  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgcca-aatcgcg 222  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||| ||||| | |   |||||| ||||| ||||| ||||| |    
T  24023966 ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgccacga-tgccacaatcgtg 24023869  T
Q  223 acacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
     ||||||| ||||||||||||| |||||||||||||||| |||||    
T  24023868 tcacgatttctctgttcttccagaccacaaatttgaagctaatat 24023824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 31109316 - 31109068
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||  ||  ||| ||||||||||||  |||||||||||||||||||||    
T  31109316 ctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaaggcagacaagtccttatcagttatacttaaccagcaagtttct 31109217  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||||||||| || | | | |   |||||| ||||||  | |||||| | ||    
T  31109216 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttacaggcacttgaaatcgtgccacgatgccaaaatcgtgtca 31109117  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  31109116 cgatttctctgttcttccaaaccacaaatttgaagccaat-ttcaacatt 31109068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 12406612 - 12406852
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||||||| ||||||||||| | ||||||||||||| |||||||| |||  ||| ||| |||||||||||| |||||||||| |||||||||||    
T  12406612 ctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttct 12406711  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||||||||| |||||||||||||| || ||  |||||| |||||||| ||| | |   |||||||||||||  | |||||| | ||    
T  12406712 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaac-tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtca 12406810  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  12406811 cgatttctctgttcttccagaccacaaatttgaagccaatat 12406852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 4873476 - 4873716
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| |||  ||  ||| |||||||||||| |||||||||| |||||||||||    
T  4873476 ctgaagaaatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaaggaagacaagtccttatcagtgatacttaacgagcaagtttct 4873575  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    |||| |||||||||||||||||| |||||||||||||| || ||| |||||| || || || ||| | |   |||||||||||||  | |||||| | ||    
T  4873576 gaattgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtca 4873674  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  4873675 cgatttctctgttcttccagaccacaaatttgaagccaatat 4873716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 87 - 267
Target Start/End: Original strand, 2058420 - 2058599
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||    
T  2058420 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctca 2058518  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    | ||  |||  |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  2058519 cggcacctcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 2058599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 87 - 267
Target Start/End: Original strand, 21640238 - 21640418
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||| ||||| |||||||| || ||| |||||| |||||||    
T  21640238 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac-tagctca 21640336  T
Q  187 ctgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    | ||  |||   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  21640337 cggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 21640418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 12397260 - 12397382
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||||||| ||||||||||| | ||||||||||||| |||||||| |||  ||| ||| |||||||||||| |||||||||| |||||||||||    
T  12397260 ctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttct 12397359  T
Q  127 gaatcgtgtcacgatttcccaag 149  Q
    |||||||||||||||||||||||    
T  12397360 gaatcgtgtcacgatttcccaag 12397382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 86 - 267
Target Start/End: Complemental strand, 20357214 - 20357033
Alignment:
Q  86 ttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctc 185  Q
    |||||| ||||||||||  |||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| || ||| |||||| ||||||    
T  20357214 ttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctc 20357116  T
Q  186 actgc-ctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    || || |  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  20357115 acggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 20357033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 18392596 - 18392773
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || |  ||||| ||||| |||||  || |||| | ||||||||    
T  18392596 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcac 18392695  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     ||  |||| |||||||||||||| | |||||| | ||||||| | ||||||||||||||||||||||||||| ||||    
T  18392696 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaat 18392773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 260
Target Start/End: Complemental strand, 24789612 - 24789439
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    ||||||||||||||||  |||||||||| ||||||||||  |||||||||||||||||||||| |||||||||||||| ||  || |||||| |||||||    
T  24789612 tgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaac-tagctca 24789514  T
Q  187 ctgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    | ||  | |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| |||||||||||||||    
T  24789513 cggcaccacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 24789439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 6592737 - 6592914
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| ||||||||||||||| || |  ||||||||||||||     || |||| | ||||||||    
T  6592737 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 6592836  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  6592837 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 6592914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 20343684 - 20343507
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||   ||||| ||||||||||| ||| || ||| ||||||||    
T  20343684 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggc-aacctagctcac 20343586  T
Q  188 tgcctctccg--atcgtgtcacgattgcca-aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     | | | |||  |||||||||||| ||||| ||||||| ||||||| | ||||||||||| ||||||||||||||| ||||    
T  20343585 -ggcaccccgaaatcgtgtcacga-tgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaagacaat 20343507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 264
Target Start/End: Original strand, 21646402 - 21646634
Alignment:
Q  33 aaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacg---gtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttctga 128  Q
    |||||||||||||||||||  |||||||| |||||| || ||||   |||||  ||| |||||||| |||||||  |||||||||| |||||||||   |    
T  21646402 aaatcgtgtcacgatttcc--agatcgtggcacgatttg-aacgtacgtcccaaggtatgaccagttcttatcaaggatacttaacgagcaagtttgaaa 21646498  T
Q  129 atcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacac 226  Q
    ||||||||||||||| ||||| ||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||||| ||||||| | | | |||    
T  21646499 atcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaatcgtgtcacga-tgccaaatttgtgtcac 21646596  T
Q  227 gattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||| |||||||||||||||||||||||||||||||||    
T  21646597 gatttctctgttcttccaaaccacaaatttgaagccaa 21646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 6594953 - 6595130
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| ||||||||||||||| || |  ||||||||||||||     || |||| | ||||||||    
T  6594953 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 6595052  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||||||||  | |||||| | ||||||| | ||||| ||||| ||||||||||||||| ||||    
T  6595053 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagacaat 6595130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 32060704 - 32060881
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||  ||||||||||||||| || |  ||||||||||||||     || |||| | ||||||||    
T  32060704 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 32060803  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  32060804 ggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 32060881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 39731118 - 39730942
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||| | |||| ||||| |||||||| ||  || ||||||  |||||||    
T  39731118 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 39731020  T
Q  188 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || || |  | |||||||||||| ||||||| || | ||||||| ||||||||||||| |||||||||||||||||||    
T  39731019 ggcatcacaaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 48408583 - 48408407
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    ||||||||||||||  ||| ||||||| |||||||||   ||||||||||||||||| |||| ||||| |||||||| ||  || ||||||  |||||||    
T  48408583 gaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaac-cagctcac 48408485  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| |||||||||| || |||||||||||||||||||    
T  48408484 ggcatcacaaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 48408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 275
Target Start/End: Original strand, 21983792 - 21983869
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||||||||||    |||||| | ||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  21983792 atcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacatt 21983869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 1533087 - 1533012
Alignment:
Q  89 accagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    ||||||||||||||  |||||||||| || |||||||  |||||||||||||||||||||| ||||| ||||||||    
T  1533087 accagtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 1533012  T

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Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 88 - 261
Target Start/End: Original strand, 43504536 - 43504709
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   |||||||||||||||||||| | ||||| |||||||| ||  || ||||||  |||||||    
T  43504536 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaac-cagctcac 43504634  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagc 261  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| ||||||||||||||||    
T  43504635 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagc 43504709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 264
Target Start/End: Original strand, 18414090 - 18414266
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||  ||||||||| ||||||||||||| ||||| |||||||| ||  || ||||||  |||||||    
T  18414090 gaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaac-cagctcac 18414188  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     ||  | |   |||||| ||||| ||||||| ||| | ||||||| ||||||||||||| |||| ||||||||||||||    
T  18414189 ggcaccacaaaatcgtgccacga-tgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaagccaa 18414266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 47264192 - 47264267
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||||||||||  | |||||| | ||||||| |||| ||||||||||||||||||||||||||||  |||||||    
T  47264192 atcgtgtcacgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 79955 - 80013
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaatatacaaca 80013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 264
Target Start/End: Original strand, 18409214 - 18409390
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||  |||||||||||||||||| |||| ||||| || ||||| ||  || ||||||  |||||||    
T  18409214 gaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaac-cagctcac 18409312  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     ||  | |   |||||||||||| ||||||| ||| |  |||||| ||||||||||||| | |||||||||||||||||    
T  18409313 ggcaccacaaaatcgtgtcacga-tgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaa 18409390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 12397418 - 12397487
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||||||||||  | |||||| | | ||||| ||||||||||||| ||||||||||||||||||||||    
T  12397418 atcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaatat 12397487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 21989482 - 21989531
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    ||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  21989482 cacgatttctctgttcttccaaaccacaaatttgaagccaactttcaaca 21989531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 1562403 - 1562479
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| ||||  ||||| ||||||||    
T  1562403 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 2479885 - 2479960
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||||||||||  | |||||| | ||| ||| |||||||||| ||||||||||||||||||||||  |||||||    
T  2479885 atcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaaatttcaaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 44847694 - 44847619
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||||||||||  | |||||| | ||||||| ||||||||||  |||||||||||||||||||||  |||||||    
T  44847694 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttcaaca 44847619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 1532958 - 1532893
Alignment:
Q  199 tcgtgtcacgattgccaaat-cgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |||||||||||| ||||||| || | ||||||| ||||||||||||| |||||||||||||||||||    
T  1532958 tcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1532893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 25767361 - 25767437
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||| |||||||||  ||| ||||||| |||||||||   |||||||||||||||||||||  ||||| ||||||||    
T  25767361 gacctgtccttatcctagaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgattt 25767437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 1562513 - 1562580
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  1562513 atcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 1562580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 18389160 - 18389215
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgattt 143  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||    
T  18389160 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 18389215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 1533048 - 1533014
Alignment:
Q  34 aatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    ||||||||||||||||||| |||||||||||||||    
T  1533048 aatcgtgtcacgatttcccaagatcgtgtcacgat 1533014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 21640279 - 21640313
Alignment:
Q  34 aatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    ||||||||||||||||||| |||||||||||||||    
T  21640279 aatcgtgtcacgatttcccaagatcgtgtcacgat 21640313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 266
Target Start/End: Complemental strand, 176704 - 176456
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||    
T  176704 agtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaagttgaccagtccttatcagagatacttaaccag 176605  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||    
T  176604 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaaaa 176505  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaata 266  Q
    ||| ||||||||||||||||||| ||||||||| ||||||||| |||||    
T  176504 tcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaata 176456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 172; Significance: 3e-92; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 691 - 938
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||   |||||||||||||||||||||||||||||||||    
T  691 agtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggaaccaaagttgaccagtccttatcagagatacttaaccag 790  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||    
T  791 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaa 890  T
Q  218 tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  891 tcgtgtcacgatttctctgttcttccataccacaaatttgaagccaat 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 2e-90; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 25 - 265
Target Start/End: Complemental strand, 45347564 - 45347324
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  45347564 ccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagttt 45347465  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgcgac 224  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| || ||||  |||||||||||||| | |||||| | |    
T  45347464 ctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcatctctaatcgtgtcacgattccaaaatcgtgtc 45347365  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| || |||||||||| ||||||||||||||||||||    
T  45347364 acgatttctttgttcttccagaccacaaatttgaagccaat 45347324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 25 - 275
Target Start/End: Original strand, 18856062 - 18856311
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  18856062 ccctgaagaaatcgtgccacgatttccctagatcatgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagttt 18856161  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgcgac 224  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||||| | |    
T  18856162 ctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtc 18856261  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  18856262 acgatttctctgttcttccagaccacaaatttgaagccaat-ttcaacatt 18856311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 45357052 - 45356861
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  45357052 agtcctccccagaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccag 45356953  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacga 209  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| || ||||  ||||||||||||    
T  45356952 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcatctcaaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 5732992 - 5733242
Alignment:
Q  18 agtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccag 117  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  5732992 agtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccag 5733091  T
Q  118 caagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaa 216  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||| || ||| ||||||||   |||| ||  | |   |||||||||||||  | ||    
T  5733092 caagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgccaaa 5733191  T
Q  217 atcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||| | || |||| |||||||||| || ||||||||||||||||||||||    
T  5733192 atcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatat 5733242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 9224144 - 9223904
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| |||  ||| ||| |||||||||||| |||||||||| |||||||||||    
T  9224144 ctgaagaaattgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttct 9224045  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||| | |   |||||||||||||  | |||||| | ||    
T  9224044 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtca 9223946  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  9223945 cgatttctctgttcttccagaccacaaatttgaagccaatat 9223904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 9228931 - 9228691
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||  ||| ||| |||||||||||| |||||||||| |||||||||||    
T  9228931 ctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttct 9228832  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| ||||||  ||||||| ||| | |   |||||||||||||  | |||||| | ||    
T  9228831 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-gagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtca 9228733  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  9228732 cgatttctctgttcttccagaccacaaatttgaagccaatat 9228691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 267
Target Start/End: Original strand, 3814359 - 3814600
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||||| ||||||||||||||||||||    
T  3814359 ccctgaagaaatcgtgtcacgatttccctagatcttgtcacgatctgcaacggttctcaggttgaccagtccttatcagtgatacttaaccagcaagttt 3814458  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcga 223  Q
    ||||||||||||||||||||||||  ||||| |||||||| || ||  |||||||| ||| || | | | |   |||||||||||||  | |||||| |     
T  3814459 ctgaatcgtgtcacgatttcccaa-atcgtgacacgatttggcgtcttgcaaactt-gcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgt 3814556  T
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  3814557 cacgatttctctgttcttccagaccacaaatttgaagccaatat 3814600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 27 - 276
Target Start/End: Complemental strand, 56141757 - 56141508
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||||||| ||||||||||| ||||||||||||||| |||| | | |||  ||| |||||||||||||||| |||||||||| |||||||||||    
T  56141757 ctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttct 56141658  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgatttt-gcttccagcaaacttagctcactgcctctcc-gatcgtgtcacgattgccaaatcgcgac 224  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||| |||||| ||||||||  || ||||  |||||||||||||  | |||||| | |    
T  56141657 gaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaaac-tagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtc 56141559  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatta 276  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  56141558 acgatttctctgttcttccagaccacaaatttgaagccaata-tcaacatta 56141508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 24742333 - 24742572
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggt-tgaccagtccttatcagagatacttaaccagcaagtttc 125  Q
    |||||||||||||||||||||||||  |||||||| |||||| |||  | || ||| ||| ||||||||||||||||  |||||||||| ||||||||||    
T  24742333 ctgaagaaatcgtgtcacgatttcc--agatcgtggcacgatttgcgtccgttcccaggtatgaccagtccttatcaaggatacttaacgagcaagtttc 24742430  T
Q  126 tgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaatcgcgac 224  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||| |||||||| ||  |||   |||||||||||||  | |||||| | |    
T  24742431 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtc 24742529  T
Q  225 acgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  24742530 acgatttctctgttcttccagaccacaaatttgaagccaatat 24742572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 18712502 - 18712348
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||| |||||| |||  ||||||| |||||||||||| |||||||||| |||||||||    
T  18712502 ccctgaagaaatcgtgccacgattttcctagattgtgtcacgatcttcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagttt 18712403  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  18712402 ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 18712348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 51520806 - 51521045
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||| ||| ||| ||||||||||| | ||||||||||||| |||  | | |||  ||| || ||||||||||||| |||||||||| |||||||||||    
T  51520806 ctgaagcaattgtgccacgatttcccaa-atcgtgtcacgatttgcgtctgacccaaggtagatcagtccttatcagggatacttaacgagcaagtttct 51520904  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||| ||||||||||| |||||||||||||| || ||| |||||| |||||||| ||| | |   |||||||||||||  | |||||| | ||    
T  51520905 gaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtca 51521003  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  51521004 cgatttctctgttcttccagaccacaaatttgaagccaatat 51521045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 29761073 - 29761165
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaact 179  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  29761073 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 29761165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 18860403 - 18860514
Alignment:
Q  154 tgccacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaa 253  Q
    |||||||||||||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||||| | ||||||| ||||||||||||| ||||||||    
T  18860403 tgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaa 18860502  T
Q  254 tttgaagccaat 265  Q
    ||||||||||||    
T  18860503 tttgaagccaat 18860514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 7122451 - 7122279
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||   ||||||||||||||     || |||| | ||||||||    
T  7122451 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 7122352  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     || ||    |||||||||||||  | |||||| | ||||||| | ||||||||||| |||||||||||||||    
T  7122351 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 7124673 - 7124501
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||   ||||||||||||||     || |||| | ||||||||    
T  7124673 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 7124574  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     || ||    |||||||||||||  | |||||| | ||||||| | ||||||||||| |||||||||||||||    
T  7124573 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 8393166 - 8392989
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| ||||||||||||||| || |  ||||||||||||||     || |||| | ||||||||    
T  8393166 gaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 8393067  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  8393066 ggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 8392989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 28468162 - 28467986
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    ||||||||||||||| ||| ||||||| |||||||||   |||||||||||||||| ||||| ||||| |||||||| ||  || ||||||  |||||||    
T  28468162 gaccagtccttatcatagaaacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac 28468064  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || || |   ||||||| |||| ||||||| ||| | ||||||| ||||||||||||| |||||||||||||||||||    
T  28468063 ggcatcacaaaatcgtgttacga-tgccaaattcgtgtcacgatttctctgttcttccataccacaaatttgaagccaa 28467986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 5143803 - 5143869
Alignment:
Q  209 attgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    ||||| |||||| | ||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  5143803 attgcaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacatt 5143869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 8395375 - 8395198
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| || |||||||||||| || |  |||||| |||||||     || |||| | ||||||||    
T  8395375 gaccagtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttgcacccctgcaaccctagctcac 8395276  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  8395275 ggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 8395198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 16628403 - 16628343
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaacatt 16628343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 3778124 - 3778175
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  3778124 cacgatttctctgttcttccaaaccacaaatttgaagccaatatacaacatt 3778175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 264
Target Start/End: Original strand, 13992693 - 13992870
Alignment:
Q  87 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    ||||||||||||||||   | ||||||| |||||||||   |||||||||||||||||||||  ||||| |||||||| ||  || ||||||  ||||||    
T  13992693 tgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaacc-agctca 13992791  T
Q  187 ctgcctctccga-tcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    |  | || |  | ||||||||||| ||||||| ||| | ||||||| ||||||||||||| |||||||||||||||||||    
T  13992792 cgacatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 13992870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 38151968 - 38151910
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 38151910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 8689094 - 8689038
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaa 271  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||| |||||    
T  8689094 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaa 8689038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 5148244 - 5148302
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  5148244 aaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaattttcaaca 5148302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 16622824 - 16622766
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||||| | ||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaatatacaaca 16622766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 260
Target Start/End: Original strand, 31495717 - 31495889
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||   ||||| |||||||| ||  || ||||||  |||||||    
T  31495717 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaac-cagctcac 31495815  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaag 260  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| |||||||||||||||    
T  31495816 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 31495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 5268740 - 5268699
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  5268740 cacgatttctctgttcttccaaaccacaaatttgaagccaat 5268699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 6742946 - 6742886
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacatt 275  Q
    |||||| | ||||||| |||||||||||||||||| ||||||||||||||| | |||||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaatttacaacatt 6742886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 10047932 - 10047983
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaata 266  Q
    |||||| | |||||||  ||||||||||||||||||||||||||||||||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaata 10047983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 5135834 - 5135656
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||| ||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || ||||    
T  5135834 gaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactca 5135735  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    | || ||    |||| ||||||||  | |||||| | ||||||| | |||||||||||| |||||||||||||| ||||    
T  5135734 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaat 5135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 5138060 - 5137882
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||| ||||||||||  |||||||||| |||||||||||  |||||||||||| ||||||||  ||||| ||||||||     || |||| | || ||||    
T  5138060 gaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactca 5137961  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    | || ||    |||| ||||||||  | |||||| | ||||||| | |||||||||||| |||||||||||||| ||||    
T  5137960 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaat 5137882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 5396213 - 5396164
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    ||||||| |||||||||| ||||||||||||||||||| ||| |||||||    
T  5396213 cacgatttctctgttctttcaaaccacaaatttgaagctaattttcaaca 5396164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 29761182 - 29761234
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| | ||||||| ||||||||||||| |||||||||||||||| |||||    
T  29761182 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcaaatat 29761234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 54867745 - 54867795
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| | ||||| | |||| |||||||||||||||||||||||||||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaat 54867795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 8393222 - 8393183
Alignment:
Q  32 gaaatcgtgtcacgatttccctagatcgtgtcacgatctgc 72  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  8393222 gaaatcgtgtcacgatttccc-aaatcgtgtcacgatctgc 8393183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 8395431 - 8395392
Alignment:
Q  32 gaaatcgtgtcacgatttccctagatcgtgtcacgatctgc 72  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  8395431 gaaatcgtgtcacgatttccc-aaatcgtgtcacgatctgc 8395392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 9194164 - 9194216
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaa-ccacaaatttgaagccaata 266  Q
    |||||| | ||| ||| ||||||||||||||| ||||||||||||||||||||    
T  9194164 aaatcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaata 9194216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 25 - 267
Target Start/End: Complemental strand, 3584 - 3342
Alignment:
Q  25 ccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagttt 124  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||| |||||||||    
T  3584 ccctgaagaaatcgtgtcacgattttcctagatcgtgtcacgatctgcaacggtccccaggttgactagtccttatcattgatacttaacgagcaagttt 3485  T
Q  125 ctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcga 223  Q
    ||||||||||||||||||||||||| |||||||||||||| || |||  ||||| |||||||| ||| | |   |||||||||||||  | |||||| |     
T  3484 ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaac-tagctcacggccacttgaaatcgtgtcacgatgtcaaaatcgtgt 3386  T
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||    
T  3385 cacgatttctcttttcttccagaccacaaatttgaagccaatat 3342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 34799 - 34559
Alignment:
Q  27 ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttct 126  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| |||  ||| ||| |||||||||||| |||||||||| |||||||||||    
T  34799 ctgaagaaatagtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttct 34700  T
Q  127 gaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgaca 225  Q
    ||||||||||||||||||||||| |||||||||||||| || ||  ||||||  | || || ||| | |   || ||||||||||  | |||||| | ||    
T  34699 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcatgcaaac-aaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtca 34601  T
Q  226 cgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  34600 cgatttctctgttcttccagaccacaaatttgaagccaatat 34559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 8091 - 8199
Alignment:
Q  71 gcaacggtcccccggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttc 170  Q
    ||||||| |||  ||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| || ||    
T  8091 gcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtc 8190  T
Q  171 cagcaaact 179  Q
    | |||||||    
T  8191 ctgcaaact 8199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 8216 - 8268
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 8268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 4126 - 4303
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||   ||||||||||||||     || |||| | ||||||||    
T  4126 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 4225  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     ||  ||   |||||||||||||| | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  4226 ggcacctaaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 4303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 22124 - 21948
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||| ||||||||||| |||||||||| |||||||||   |||||||||||||||||||||| ||||| |||||||| || ||| |||||| ||||||||    
T  22124 gacctgtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac-tagctcac 22026  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     ||  |||   |||||||||||| ||||||| ||  | | ||||| ||||||||||||| |||||||||||||| ||||    
T  22025 ggcacctcgaaatcgtgtcacga-tgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaa 21948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 22084 - 22050
Alignment:
Q  34 aatcgtgtcacgatttccctagatcgtgtcacgat 68  Q
    ||||||||||||||||||| |||||||||||||||    
T  22084 aatcgtgtcacgatttcccaagatcgtgtcacgat 22050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 3001 - 3178
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||   ||||||||| |||||||||||| |||||||||||||||||||   ||||||||||||||     || |||| | ||||||||    
T  3001 gaccagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 3100  T
Q  188 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
     || ||    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  3101 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 3178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 17616 - 17440
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    ||||| |||||||||  |||||||||| |||||||||   |||| ||||||||||||||||| ||||| |||||||| ||  || ||||||  |||||||    
T  17616 gaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac 17518  T
Q  188 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| ||||||||||||| |||||||||||||||||||    
T  17517 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 6044 - 5866
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttc-ccaaggtcgtgccacgattttgcttccagcaaacttagctca 186  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||  |||   ||||| ||||| |||||  || |||| | |||||||    
T  6044 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaatttgcaccctgcaaccctagctca 5945  T
Q  187 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    | ||  |||| |||||||||||| | | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  5944 cggcacctccaatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 5866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 1783 - 1716
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||||||||||| | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  1783 atcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 1716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 264
Target Start/End: Original strand, 9124 - 9299
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   |||||||||||||||||||||  || || |||||||| ||  || ||||||  |||||||    
T  9124 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaa-tcatgtcacgatttggcaccctgcaaacc-agctcac 9221  T
Q  188 tgcctctccga-tcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || || |  | ||||||||||| ||||||| ||| | ||||||| ||||||||||||| |||||||||||||||||||    
T  9222 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 264
Target Start/End: Original strand, 11569 - 11744
Alignment:
Q  88 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattttgcttccagcaaacttagctcac 187  Q
    |||||||||||||||  || ||||||| |||||||||   |||||||||||||||||||||  ||||| |||||||| ||  || ||||||  |||||||    
T  11569 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcgtgtcacgatttggcaccctgcaaac-cagctcac 11666  T
Q  188 tgcctc-tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
     || || |   |||||||||||| ||||||| ||| | ||||||| ||||||||||||| ||||||| |||||||||||    
T  11667 ggcatcatgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaagccaa 11744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 36370 - 36324
Alignment:
Q  227 gattcctctgttcttccaaaccacaaatttgaagccaatattcaaca 273  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  36370 gatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 36324  T

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Target: scaffold0087; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 43509 - 43443
Alignment:
Q  198 atcgtgtcacgattgcca-aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||||||||||| |||| ||||| | ||||||| |||| ||||||||||||| ||||||||||||||    
T  43509 atcgtgtcacgat-gccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaa 43443  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 6252 - 6302
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 6302  T

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Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 3072 - 3110
Alignment:
Q  227 gattcctctgttcttccaaaccacaaatttgaagccaat 265  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  3072 gatttctctgttcttccaaaccacaaatttgaagccaat 3110  T

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Target: scaffold0006; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 132801 - 132765
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaag 260  Q
    ||||||| |||||||||||||||||||||||||||||    
T  132801 cacgatttctctgttcttccaaaccacaaatttgaag 132765  T

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Target: scaffold0006; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 149610 - 149653
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaatat 267  Q
    ||||||| |||||||  |||||||||||||||||||||||||||    
T  149610 cacgatttctctgtttctccaaaccacaaatttgaagccaatat 149653  T

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Target: scaffold0098 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 45755 - 45795
Alignment:
Q  224 cacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  45755 cacgatttctctgttcttccaaaccacaaatttgaagccaa 45795  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 86153 - 86214
Alignment:
Q  215 aaatcgcgacacgattcctctgttcttccaaaccac-aaatttgaagccaatattcaacatt 275  Q
    |||||| | ||||||| |||| |||||||||||||| ||||||||||||||||| |||||||    
T  86153 aaatcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaatatacaacatt 86214  T

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Target: scaffold0510 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 1158 - 1082
Alignment:
Q  198 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaatattcaacat 274  Q
    |||||||||||||  | |||||| | |||||||  ||||||||| |||||||||||||||||| |||  ||||||||    
T  1158 atcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaacat 1082  T

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Target: scaffold0510; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 1248 - 1192
Alignment:
Q  108 acttaaccagcaagtttctgaatcgtgtcacgatttcccaaggtcgtgccacgattt 164  Q
    |||||||||||||||||   ||||||||||||||||| |||  |||| |||||||||    
T  1248 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgattt 1192  T

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Target: scaffold0140 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 7986 - 7920
Alignment:
Q  198 atcgtgtcacgattgccaaat-cgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 264  Q
    ||||||||||||| ||||||| || | ||||||| |||||||||| || |||||||||||||||||||    
T  7986 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 7920  T

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