View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19430_low_10 (Length: 413)
Name: NF19430_low_10
Description: NF19430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19430_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 375; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 9 - 395
Target Start/End: Original strand, 29607207 - 29607593
Alignment:
| Q |
9 |
gataatactacaatgagttcagatgaaggaccgtcaccagcacccagtcccagtgcggtaatatccttttccattttactttaagttacaattctatatt |
108 |
Q |
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| T |
29607207 |
gataatactacaatgagttcagatgaaggaccgtcaccagcacccagtcccagtgcggtaatatctttttccattttactttaagttacaattctatatt |
29607306 |
T |
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| Q |
109 |
tacggacctctttggtctggattatgccgcattaacgaattcatgcaatctttgtcatctgatctttatcagacagattgtactctgacttggcaaaact |
208 |
Q |
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| T |
29607307 |
tacggacctctttggtctggatcatgccgcattaacgaattcatgcaatctttgtcatctgatctttatcagacagattgtactctgacttggcaaaact |
29607406 |
T |
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| Q |
209 |
tgctaaagcttcttttatcgaatcttatgattttatgtttcacagaatggtgcacaatcttaccaagggcaatggagaaagatgttggcaactggtggaa |
308 |
Q |
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| T |
29607407 |
tgctaaagcttcttttatcgaatcttatgattttatgtttcacagaatggtgcacaatcttaccaagggcaatggagaaagatgttggcaactggtggaa |
29607506 |
T |
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| Q |
309 |
ttgctattgccattttgttatgtgtcacttgagtaactgcagaagatgctcatatgacaaaacatggattcgagcgaaacggttatt |
395 |
Q |
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| T |
29607507 |
ttgctattgccattttgttatgtgtcacttgagtaactgcagaagatgctcatatgacaaaacatggattcaagcgaaacggttatt |
29607593 |
T |
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