View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19430_low_13 (Length: 334)

Name: NF19430_low_13
Description: NF19430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19430_low_13
NF19430_low_13
[»] chr4 (26 HSPs)
chr4 (18-138)||(34344432-34344552)
chr4 (169-222)||(13588608-13588661)
chr4 (170-251)||(20316295-20316376)
chr4 (169-226)||(17661840-17661897)
chr4 (169-266)||(17108608-17108705)
chr4 (169-242)||(25118000-25118074)
chr4 (169-221)||(9849862-9849914)
chr4 (170-266)||(12246674-12246770)
chr4 (169-236)||(11252268-11252335)
chr4 (169-204)||(23975730-23975765)
chr4 (169-242)||(10108137-10108211)
chr4 (169-266)||(16928814-16928911)
chr4 (69-139)||(20361012-20361082)
chr4 (169-221)||(14573339-14573392)
chr4 (69-118)||(16924462-16924511)
chr4 (169-242)||(19547185-19547258)
chr4 (169-221)||(9053896-9053948)
chr4 (169-221)||(25024997-25025049)
chr4 (169-240)||(18447575-18447646)
chr4 (169-241)||(7613626-7613699)
chr4 (170-251)||(10089570-10089651)
chr4 (173-221)||(19883666-19883715)
chr4 (169-221)||(20828293-20828346)
chr4 (169-205)||(1832224-1832260)
chr4 (169-240)||(11512161-11512233)
chr4 (169-221)||(19556692-19556744)
[»] chr7 (26 HSPs)
chr7 (18-138)||(46419943-46420063)
chr7 (169-266)||(2506920-2507017)
chr7 (169-222)||(9722341-9722394)
chr7 (69-138)||(7306100-7306169)
chr7 (169-221)||(1254850-1254902)
chr7 (169-242)||(8038909-8038983)
chr7 (69-138)||(1534009-1534078)
chr7 (169-221)||(5046988-5047040)
chr7 (75-139)||(19764428-19764492)
chr7 (169-252)||(4900454-4900537)
chr7 (169-242)||(2505733-2505807)
chr7 (169-266)||(8317551-8317648)
chr7 (69-118)||(41201843-41201892)
chr7 (69-140)||(21781054-21781124)
chr7 (71-121)||(6649008-6649058)
chr7 (69-139)||(7916207-7916277)
chr7 (169-242)||(24751333-24751404)
chr7 (169-221)||(9079036-9079089)
chr7 (69-118)||(18342011-18342059)
chr7 (177-242)||(20175992-20176057)
chr7 (169-221)||(21502744-21502797)
chr7 (69-118)||(38705937-38705985)
chr7 (175-241)||(3736235-3736300)
chr7 (169-240)||(13252792-13252864)
chr7 (171-263)||(15611152-15611243)
chr7 (169-240)||(26249210-26249282)
[»] chr6 (26 HSPs)
chr6 (18-139)||(3018140-3018260)
chr6 (169-265)||(32759859-32759955)
chr6 (173-258)||(16175673-16175758)
chr6 (169-266)||(10822127-10822223)
chr6 (169-221)||(27961104-27961156)
chr6 (173-252)||(16167712-16167791)
chr6 (169-241)||(17383648-17383720)
chr6 (169-240)||(21079856-21079927)
chr6 (169-219)||(20404167-20404217)
chr6 (169-266)||(22564659-22564756)
chr6 (169-266)||(14723575-14723671)
chr6 (69-138)||(31519894-31519963)
chr6 (169-240)||(9339113-9339184)
chr6 (75-118)||(28902846-28902889)
chr6 (174-219)||(9507426-9507472)
chr6 (173-219)||(21060560-21060606)
chr6 (169-263)||(30356153-30356247)
chr6 (69-118)||(4449230-4449278)
chr6 (69-138)||(4968258-4968327)
chr6 (169-221)||(9898021-9898074)
chr6 (169-221)||(13216459-13216512)
chr6 (69-118)||(13338109-13338158)
chr6 (69-118)||(13507563-13507611)
chr6 (69-138)||(17311449-17311518)
chr6 (169-221)||(3358033-3358085)
chr6 (169-240)||(21760542-21760614)
[»] chr5 (22 HSPs)
chr5 (18-139)||(37278276-37278397)
chr5 (169-237)||(17831583-17831651)
chr5 (175-266)||(24263860-24263951)
chr5 (169-241)||(28254781-28254853)
chr5 (169-221)||(26253359-26253411)
chr5 (169-223)||(18939410-18939465)
chr5 (171-240)||(19761716-19761785)
chr5 (169-266)||(19006958-19007056)
chr5 (169-240)||(19052991-19053063)
chr5 (175-221)||(34488753-34488800)
chr5 (169-223)||(18227502-18227556)
chr5 (169-266)||(23387657-23387754)
chr5 (169-222)||(26348332-26348386)
chr5 (169-217)||(15520865-15520914)
chr5 (169-222)||(23338831-23338884)
chr5 (169-242)||(29989135-29989208)
chr5 (69-118)||(33891917-33891965)
chr5 (69-118)||(37574902-37574950)
chr5 (169-221)||(17336480-17336532)
chr5 (169-240)||(20860229-20860301)
chr5 (169-240)||(22845930-22846002)
chr5 (169-221)||(28280172-28280224)
[»] chr8 (24 HSPs)
chr8 (169-264)||(35861574-35861668)
chr8 (169-266)||(28904077-28904174)
chr8 (170-266)||(13833713-13833809)
chr8 (169-222)||(14077013-14077066)
chr8 (169-266)||(24090988-24091084)
chr8 (169-266)||(24851054-24851151)
chr8 (68-138)||(44462714-44462784)
chr8 (68-138)||(44470245-44470315)
chr8 (69-138)||(11722660-11722729)
chr8 (169-221)||(24518741-24518793)
chr8 (169-240)||(15176567-15176638)
chr8 (69-118)||(16375930-16375979)
chr8 (169-234)||(17649692-17649757)
chr8 (169-240)||(24109169-24109241)
chr8 (169-220)||(24381481-24381533)
chr8 (69-141)||(35631430-35631502)
chr8 (169-223)||(17976128-17976182)
chr8 (169-266)||(18570419-18570516)
chr8 (169-241)||(7985007-7985080)
chr8 (75-140)||(9763183-9763248)
chr8 (169-221)||(14271731-14271784)
chr8 (169-217)||(19784938-19784987)
chr8 (169-221)||(30117812-30117865)
chr8 (169-240)||(30832829-30832901)
[»] scaffold0086 (2 HSPs)
scaffold0086 (169-266)||(12903-13000)
scaffold0086 (169-240)||(11983-12054)
[»] chr1 (28 HSPs)
chr1 (71-137)||(44407448-44407514)
chr1 (169-266)||(14235394-14235491)
chr1 (169-266)||(26652468-26652563)
chr1 (169-242)||(10063094-10063167)
chr1 (169-241)||(27116357-27116429)
chr1 (169-238)||(27911955-27912025)
chr1 (69-138)||(2399595-2399664)
chr1 (169-221)||(16786247-16786300)
chr1 (169-221)||(21848516-21848569)
chr1 (169-241)||(26101750-26101823)
chr1 (169-242)||(31260760-31260833)
chr1 (69-138)||(34678676-34678745)
chr1 (169-240)||(17016967-17017039)
chr1 (170-240)||(13267736-13267807)
chr1 (169-239)||(16915332-16915403)
chr1 (169-266)||(33192242-33192339)
chr1 (169-221)||(7881685-7881738)
chr1 (169-221)||(15526950-15527003)
chr1 (169-241)||(15542442-15542515)
chr1 (169-221)||(15811599-15811652)
chr1 (179-252)||(24464518-24464590)
chr1 (169-221)||(25959611-25959664)
chr1 (173-221)||(35133778-35133827)
chr1 (69-118)||(49329536-49329585)
chr1 (169-240)||(18527631-18527703)
chr1 (169-240)||(21450657-21450729)
chr1 (169-240)||(22507509-22507581)
chr1 (70-138)||(25259463-25259531)
[»] chr3 (22 HSPs)
chr3 (71-140)||(47165461-47165530)
chr3 (169-251)||(3002947-3003029)
chr3 (169-221)||(26092794-26092846)
chr3 (69-139)||(33908890-33908960)
chr3 (69-118)||(18554392-18554441)
chr3 (69-118)||(23702340-23702389)
chr3 (69-118)||(23720796-23720845)
chr3 (69-118)||(23739252-23739301)
chr3 (169-220)||(18735425-18735477)
chr3 (169-240)||(19387985-19388057)
chr3 (169-221)||(20886759-20886811)
chr3 (169-240)||(31284039-31284111)
chr3 (169-240)||(8881536-8881607)
chr3 (169-221)||(3114863-3114916)
chr3 (169-221)||(5509959-5510012)
chr3 (169-222)||(15669438-15669491)
chr3 (173-242)||(23054711-23054779)
chr3 (75-119)||(6579551-6579595)
chr3 (171-266)||(8765566-8765661)
chr3 (171-266)||(13906693-13906788)
chr3 (169-240)||(13938981-13939053)
chr3 (169-221)||(28326288-28326340)
[»] scaffold0072 (1 HSPs)
scaffold0072 (169-266)||(38181-38278)
[»] scaffold0669 (1 HSPs)
scaffold0669 (69-139)||(6839-6909)
[»] chr2 (23 HSPs)
chr2 (169-222)||(32130854-32130907)
chr2 (69-138)||(35593211-35593280)
chr2 (169-242)||(34369217-34369291)
chr2 (69-138)||(4969050-4969119)
chr2 (169-242)||(8501644-8501717)
chr2 (75-140)||(11882222-11882287)
chr2 (169-266)||(17199417-17199513)
chr2 (169-222)||(32138067-32138120)
chr2 (169-266)||(32141501-32141598)
chr2 (173-242)||(32438814-32438883)
chr2 (169-221)||(16042815-16042867)
chr2 (169-221)||(29717510-29717562)
chr2 (168-222)||(18553178-18553233)
chr2 (169-266)||(25537446-25537543)
chr2 (169-242)||(27871175-27871249)
chr2 (169-266)||(34574403-34574500)
chr2 (169-221)||(19198631-19198684)
chr2 (171-220)||(22627277-22627326)
chr2 (69-138)||(37393270-37393339)
chr2 (169-240)||(25532126-25532198)
chr2 (169-221)||(25922495-25922547)
chr2 (169-240)||(27907657-27907729)
chr2 (169-221)||(30682357-30682409)
[»] scaffold0005 (1 HSPs)
scaffold0005 (169-221)||(243984-244037)
[»] scaffold0573 (1 HSPs)
scaffold0573 (75-118)||(6905-6948)
[»] scaffold0062 (1 HSPs)
scaffold0062 (169-224)||(41688-41743)
[»] scaffold0637 (1 HSPs)
scaffold0637 (169-239)||(7276-7346)
[»] scaffold0016 (1 HSPs)
scaffold0016 (169-266)||(4714-4811)
[»] scaffold0258 (1 HSPs)
scaffold0258 (169-241)||(20385-20458)
[»] scaffold0214 (1 HSPs)
scaffold0214 (69-138)||(388-456)
[»] scaffold0043 (1 HSPs)
scaffold0043 (169-198)||(88614-88643)
[»] scaffold0056 (1 HSPs)
scaffold0056 (169-240)||(22926-22998)


Alignment Details
Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 34344432 - 34344552
Alignment:
Q  18 tgtcccacttttcctgaagtcatttttccaaggacgtcccctggctttgctcctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaa 117  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34344432 tgtcccacttttcctgaagtcattttcccagggacgtcccctggctttgctcctgggaaatttgccaggggtttcaaggccttgtcaaaatccctgacaa 34344531  T
Q  118 atgaacatatttcttgtagtg 138  Q
    ||||||| |||||||||||||    
T  34344532 atgaacagatttcttgtagtg 34344552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 13588608 - 13588661
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgtttt 222  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  13588608 tttgcatgatttctttgtggattacatcaaaacaccctataattgctatgtttt 13588661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 20316376 - 20316295
Alignment:
Q  170 ttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaata 251  Q
    ||||||||||||||  |||||||||||||||||||||| |||| | |||||||| ||||| |||||||||||| | ||||||    
T  20316376 ttgcatgatttcttcttgaattacatcaaaacaccataaaattacaatgttttggaaaaactagaattacatgactcaaata 20316295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 17661840 - 17661897
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaa 226  Q
    |||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||    
T  17661840 tttgcatgatttcttcttgaattacatcaaaacaccctagaattgctatgttttgaaa 17661897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 17108608 - 17108705
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| ||||||||| || ||||| ||||| ||||||||||||| |  |||| |||||||||| | | ||||||| |||||||||||||    
T  17108608 tttgcatgatttcttcgtgaattacttcaaaaaccccataaaattgctatgtttcgggaaaactagaattaca-gactcaaatataaaaaacattacaa 17108705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 25118074 - 25118000
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt-tgaaaaaagtagaattacatg 242  Q
    |||||||||||||||  ||||||||||||||||||| || |||||||||||||  | ||||| ||||||||||||    
T  25118074 tttgcatgatttcttcttgaattacatcaaaacaccttagaattgctatgtttcaggaaaaactagaattacatg 25118000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 9849914 - 9849862
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| ||||||||||| |||||||| || |||||||||||||    
T  9849914 tttgcatgatttcttcgtgaattacataaaaacaccctaaaattgctatgttt 9849862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 12246770 - 12246674
Alignment:
Q  170 ttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||| |  || | || ||||||||| | ||| |||  ||||||||||||    
T  12246770 ttgcatgatttctttgtgaattacatcaaaataccctaaaattgctatatttcgggaagaatataattacatgactcaagtatagaaaacattacaa 12246674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 11252335 - 11252268
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaat 236  Q
    ||||||||||||||| ||||||||| ||||||| || || ||||||||||||| | ||||| ||||||    
T  11252335 tttgcatgatttcttcgtgaattacttcaaaaccccctaaaattgctatgtttcggaaaaactagaat 11252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 23975730 - 23975765
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacacc 204  Q
    ||||||||||||||||||||||||||||||||||||    
T  23975730 tttgcatgatttctttgtgaattacatcaaaacacc 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 10108137 - 10108211
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt-tgaaaaaagtagaattacatg 242  Q
    |||||||||||||||  | ||||||||||||||||| ||||||| |||||||| || ||||| || |||||||||    
T  10108137 tttgcatgatttcttcttcaattacatcaaaacaccctataattactatgtttctggaaaaattataattacatg 10108211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 16928814 - 16928911
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| ||||||||| || ||||  || || ||||||||||||||| ||||| |||||||||| | | |||||||  ||||||||||||    
T  16928814 tttgcatgatttcttcgtgaattacttcaaaaatcccttaaaattgctatgttttggaaaaactagaattaca-gactcaaatatagaaaacattacaa 16928911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 20361012 - 20361082
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtgt 139  Q
    |||| |||||||||||||||||||||| || ||||||||||||| ||||| |   || |||||||||||||    
T  20361012 cctgagaaatttgccaggggtttcaagaccctgtcaaaatccctagcaaaaggtaatgtttcttgtagtgt 20361082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 14573339 - 14573392
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttt 221  Q
    |||||||||||||||||||||||||||| |||||||  || |||||||||||||    
T  14573339 tttgcatgatttctttgtgaattacatcaaaaacacactaaaattgctatgttt 14573392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 16924462 - 16924511
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| ||||||||||||||||||||  |||||||||||||||| |||||    
T  16924462 cctggcaaatttgccaggggtttcaaacccttgtcaaaatccctagcaaa 16924511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 19547258 - 19547185
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatg 242  Q
    |||||||||||||||  ||||||||||||||||||| || ||||| | ||||| |  |||| ||||||||||||    
T  19547258 tttgcatgatttcttcttgaattacatcaaaacaccctagaattgttttgtttcgggaaaactagaattacatg 19547185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 9053896 - 9053948
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| ||| |||||||||||| ||| || |||||||||||||    
T  9053896 tttgcatgatttcttcgtgcattacatcaaaataccctaaaattgctatgttt 9053948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 25024997 - 25025049
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| ||||||||||| |||||||| || |||| ||||||||    
T  25024997 tttgcatgatttcttcgtgaattacataaaaacaccctaaaattactatgttt 25025049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 18447646 - 18447575
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    |||||||||||| || ||||||||||| |||||||| || ||||| ||||||| || || | ||||||||||    
T  18447646 tttgcatgatttgttcgtgaattacattaaaacaccctaaaattgttatgtttcgagaagaatagaattaca 18447575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 7613626 - 7613699
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttga-aaaaagtagaattacat 241  Q
    |||||||||||||||  ||||| || ||||||||||  |||||||| |||||| || ||||| |||||||||||    
T  7613626 tttgcatgatttcttcttgaatcacgtcaaaacaccccataattgccatgtttcgagaaaaactagaattacat 7613699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 251
Target Start/End: Original strand, 10089570 - 10089651
Alignment:
Q  170 ttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaata 251  Q
    ||||||||||||||  ||||||| || |||||||| || |||| ||||||||||| |||  | |||||||||| | ||||||    
T  10089570 ttgcatgatttcttcttgaattatattaaaacaccctagaatttctatgttttgagaaacctggaattacatgactcaaata 10089651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 19883715 - 19883666
Alignment:
Q  173 catgatttctttgtgaattacatc-aaaacaccatataattgctatgttt 221  Q
    ||||||||||| |||||||||||| |||||||| ||||||| ||||||||    
T  19883715 catgatttcttcgtgaattacatcaaaaacaccctataatttctatgttt 19883666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 20828346 - 20828293
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    ||||||||||||||| |||||||||||||| ||| || || |||||||||||||    
T  20828346 tttgcatgatttcttcgtgaattacatcaagaacgccctaaaattgctatgttt 20828293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 1832260 - 1832224
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacacca 205  Q
    |||||||||||| || |||||||||||||||||||||    
T  1832260 tttgcatgattttttcgtgaattacatcaaaacacca 1832224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 11512233 - 11512161
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||||||| |||| ||| |||||||| || ||||||||| ||| || || | ||||||||||    
T  11512233 tttgcatgatttctttgtggattatatcaaaaacaccctagaattgctatctttcgagaagaatagaattaca 11512161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 19556744 - 19556692
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| ||||||||| ||||||| || || ||| |||||||||    
T  19556744 tttgcatgatttcttcgtgaattacttcaaaaccccctaaaatagctatgttt 19556692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 46420063 - 46419943
Alignment:
Q  18 tgtcccacttttcctgaagtcatttttccaaggacgtcccctggctttgctcctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaa 117  Q
    |||||||||||||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  46420063 tgtcccacttttcctgaagtcattttcccagggacgtcccctgactttgctcttgggaaatttgccaggggtttcaaggccttgtcaaaatccctgacaa 46419964  T
Q  118 atgaacatatttcttgtagtg 138  Q
    ||||||| |||||||||||||    
T  46419963 atgaacagatttcttgtagtg 46419943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 2507017 - 2506920
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| |||||||| ||||||||||| || |||| ||||||||||  || | |||||||||||| | |||||||  ||||||||||||    
T  2507017 tttgcatgatttcttcgtgaattagatcaaaacaccctaaaatttctatgttttgggaataatagaattacatgactcaaatatagaaaacattacaa 2506920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 9722341 - 9722394
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgtttt 222  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  9722341 tttgcatgatttctttgtggattacatcaaaacaccctataattgctatgtttt 9722394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 7306100 - 7306169
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||||||||  |||  |||||||||||    
T  7306100 cctggcaaatttgccaggggtttcaaacccttgtcaaaatccctggcaaatggtcattattcttgtagtg 7306169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 1254902 - 1254850
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  1254902 tttgcttgatttcttcgtgaattacatcaaaacaccctataattgctatgttt 1254850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 8038909 - 8038983
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt-tgaaaaaagtagaattacatg 242  Q
    |||| ||||||||||| ||||||||||||||||||| || |||||||||||||  | ||||| ||||||||||||    
T  8038909 tttggatgatttctttttgaattacatcaaaacaccctagaattgctatgtttcaggaaaaactagaattacatg 8038983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 1534078 - 1534009
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| ||||||||||||||||||| | || ||||||||||| |||||||||  ||| ||||||||||||    
T  1534078 cctggcaaatttgccaggggtttcatgtccctgtcaaaatccttggcaaatgtgcatttttcttgtagtg 1534009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 5047040 - 5046988
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| |||||||||||||||||||  || |||||||||||||    
T  5047040 tttgcatgatttcttcgtgaattacatcaaaacactctaaaattgctatgttt 5046988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 19764428 - 19764492
Alignment:
Q  75 aaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtgt 139  Q
    ||||||||||||||||||||  |||||||||||||||||||||| |  |||  ||||||||||||    
T  19764428 aaatttgccaggggtttcaaacccttgtcaaaatccctggcaaaaggtcattattcttgtagtgt 19764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 4900537 - 4900454
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatat 252  Q
    ||||||||||||||| |  |||||  |||||||||| |||||||||||||||| |  |||||||| |||||||| | |||||||    
T  4900537 tttgcatgatttcttcggtaattaggtcaaaacaccctataattgctatgtttagggaaaagtaggattacatgacacaaatat 4900454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 2505733 - 2505807
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaaca-ccatataattgctatgttttgaaaaaagtagaattacatg 242  Q
    |||||||||||||||  ||||||||||||||||| || || ||||||||||||| |  |||| ||||||||||||    
T  2505733 tttgcatgatttcttcttgaattacatcaaaacacccttaaaattgctatgtttcgggaaaactagaattacatg 2505807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 8317648 - 8317551
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| ||||||||| || |||||||| |  ||||||||||||| | ||||| |||||||||| | | |||||||  ||||||||||||    
T  8317648 tttgcatgatttcttcgtgaattacttcaaaaacaccctcaaattgctatgtttcggaaaaactagaattaca-gactcaaatatagaaaacattacaa 8317551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 41201843 - 41201892
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| |||||||||||||| |||||  ||||||||||||||||||||||    
T  41201843 cctggaaaatttgccaggggcttcaaacccttgtcaaaatccctggcaaa 41201892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 21781054 - 21781124
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtgtt 140  Q
    ||||| ||||||||||||||||||||  ||||| |||||||||||||||| |  |||  |||||||||||||    
T  21781054 cctggcaaatttgccaggggtttcaa-accttgacaaaatccctggcaaaaggtcattattcttgtagtgtt 21781124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 6649058 - 6649008
Alignment:
Q  71 tgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatga 121  Q
    ||||||||||||||||||||| | | || ||||||||||||||| ||||||    
T  6649058 tgggaaatttgccaggggttttatgcccctgtcaaaatccctggaaaatga 6649008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 7916277 - 7916207
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtgt 139  Q
    ||||| |||||||||||||||| |||  || ||||||||||||||| |||    |||||||||||||||||    
T  7916277 cctggcaaatttgccaggggttccaaacccctgtcaaaatccctggtaaaatgtcatatttcttgtagtgt 7916207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 24751404 - 24751333
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatg 242  Q
    |||||||| |||||| |||||||||||||||||||| || |||||  |||||||   |||| ||||||||||||    
T  24751404 tttgcatggtttcttcgtgaattacatcaaaacaccctagaattg--atgtttttggaaaaatagaattacatg 24751333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 9079089 - 9079036
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| ||||||||| || |||||  ||||||||||||||||||    
T  9079089 tttgcatgatttcttcgtgaattacttcaaaaacctcatataattgctatgttt 9079036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 18342011 - 18342059
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||||    
T  18342011 cctggcaaatttgccaggggtttcaa-accttgacaaaatccctggcaaa 18342059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 20175992 - 20176057
Alignment:
Q  177 atttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatg 242  Q
    |||||||  ||||||||||||||||||| || ||||||| ||||| |  |||| ||||||||||||    
T  20175992 atttcttcatgaattacatcaaaacaccctagaattgctgtgtttcgggaaaattagaattacatg 20176057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 21502744 - 21502797
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| ||||||||| || |||||||| || |||||||||||||    
T  21502744 tttgcatgatttcttcgtgaattacctcaaaaacaccctagaattgctatgttt 21502797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 38705937 - 38705985
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||||    
T  38705937 cctggcaaatttgccaggggtttcaa-accttgacaaaatccctggcaaa 38705985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 3736235 - 3736300
Alignment:
Q  175 tgatttctttgtgaattacatcaa-aacaccatataattgctatgttttgaaaaaagtagaattacat 241  Q
    |||||||||||||||||||||||| |||||| || ||||||  ||||| || |||| |||||||||||    
T  3736235 tgatttctttgtgaattacatcaataacaccctaaaattgc--tgtttcgagaaaaatagaattacat 3736300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 13252864 - 13252792
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| |||||| | || || ||||| |||||||||  |||| ||||||||||    
T  13252864 tttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgttatgttttgggaaaactagaattaca 13252792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 15611243 - 15611152
Alignment:
Q  171 tgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacatta 263  Q
    ||||||||||||| |||||||||| ||||||||  || | ||||||||||| |  || | ||||||||||  || ||||||| ||||||||||    
T  15611243 tgcatgatttcttcgtgaattacaacaaaacactctaaatttgctatgtttcgggaagaatagaattaca-agctcaaatataaaaaacatta 15611152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 26249282 - 26249210
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| || ||||| || || ||||||||||||||   |||| ||||||||||    
T  26249282 tttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgttttaggaaaactagaattaca 26249210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 3018140 - 3018260
Alignment:
Q  18 tgtcccacttttcctgaagtcatttttccaaggacgtcccctggctttgctcctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaa 117  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3018140 tgtcccactttttctgaagtcattttccca-ggacgtcccctggctctgctcctgggaaattttccaggggcttcaaggccttgtcaaaatccctggcaa 3018238  T
Q  118 atgaacatatttcttgtagtgt 139  Q
    ||||||| ||||||||||||||    
T  3018239 atgaacagatttcttgtagtgt 3018260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 32759859 - 32759955
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattaca 265  Q
    ||||||||||||||| |||||||||||||||||| | || |||||||||||||||  ||||||||||||||||| | ||||| |  |||||||||||    
T  32759859 tttgcatgatttcttcgtgaattacatcaaaacatcctagaattgctatgttttgggaaaagtagaattacatgactcaaatttagaaaacattaca 32759955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 16175673 - 16175758
Alignment:
Q  173 catgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaa 258  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||||||||   |||||||||||||||| | ||||||| |||||    
T  16175673 catgatttcttcgtgaattacatcaaaacaccatagaattactatgttttggggaaagtagaattacatgactcaaatataaaaaa 16175758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 10822127 - 10822223
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| || ||||||||||||||||| || |||||||||||||| | |||| |||||||||||  |  ||||||  ||||||||||||    
T  10822127 tttgcatgatttcttcgt-aattacatcaaaacaccctagaattgctatgttttaagaaaattagaattacataacaaaaatatagaaaacattacaa 10822223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 27961104 - 27961156
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||||||    
T  27961104 tttgcatgatttcttcgtgaattacatcaaaacaccctagaattgctatgttt 27961156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 252
Target Start/End: Original strand, 16167712 - 16167791
Alignment:
Q  173 catgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatat 252  Q
    ||||||||||||  |||||||||||||||||| ||||||| ||||||| ||  |||| |||||||||||| | |||||||    
T  16167712 catgatttctttaagaattacatcaaaacaccctataattactatgttatgggaaaattagaattacatgactcaaatat 16167791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 17383648 - 17383720
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacat 241  Q
    ||||||||||||||| | ||||||| ||||||| || || |||||||||||||||  |||| |||||||||||    
T  17383648 tttgcatgatttcttcgcgaattacttcaaaaccccctaaaattgctatgttttgggaaaactagaattacat 17383720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 21079927 - 21079856
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    |||||||||||||||  |||||||||||||||||||||| |||| |||||| | | ||| | ||||||||||    
T  21079927 tttgcatgatttcttcttgaattacatcaaaacaccataaaatttctatgtatcggaaataatagaattaca 21079856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 20404217 - 20404167
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgt 219  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||| |||||    
T  20404217 tttgcatgatttcttcgtgaattacatcaaaacatcataaaattgttatgt 20404167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 22564756 - 22564659
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| |||||||||||||| |||||| || ||||||||||||| || || |  ||||||||| | | |||||||  ||||||||||||    
T  22564756 tttgcatgatttcttcgtgaattacatcaacaacaccctaaaattgctatgtttcgagaagaacagaattaca-gactcaaatatagaaaacattacaa 22564659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 14723575 - 14723671
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| ||||||||| ||||||  || || |||||||||||||   ||||| |||||||||| | | |||||||  ||||||||||||    
T  14723575 tttgcatgatttcttcgtgaattacttcaaaaacccctaaaattgctatgtttcagaaaaactagaattaca-gactcaaatatagaaaacattacaa 14723671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 31519963 - 31519894
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| |||||||||||||||| |||  || |||||||||||||||||||    ||||||||||||||||    
T  31519963 cctggcaaatttgccaggggttccaaacccctgtcaaaatccctggcaaaatgtcatatttcttgtagtg 31519894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 9339184 - 9339113
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    |||| ||||||||||  ||||||||||||||| ||| || ||||||||||||| | ||| | ||||||||||    
T  9339184 tttgaatgatttcttcatgaattacatcaaaataccctaaaattgctatgtttcggaaagaatagaattaca 9339113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 28902889 - 28902846
Alignment:
Q  75 aaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    |||||||||||||| |||||  ||||||||||||||||||||||    
T  28902889 aaatttgccaggggcttcaaacccttgtcaaaatccctggcaaa 28902846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 9507472 - 9507426
Alignment:
Q  174 atgatttctttgtgaattacatc-aaaacaccatataattgctatgt 219  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||    
T  9507472 atgatttcttcgtgaattacatcaaaaacaccctataattgctatgt 9507426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 21060606 - 21060560
Alignment:
Q  173 catgatttctttgtgaattacatcaaaacaccatataattgctatgt 219  Q
    |||||||||||  ||||||||||||||||||| || |||||||||||    
T  21060606 catgatttcttcttgaattacatcaaaacaccgtaaaattgctatgt 21060560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 30356153 - 30356247
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacatta 263  Q
    ||||||||||||||  |||||||||||||||||| | || ||||| ||||||| |  || | |||||||||||| | || ||||  |||||||||    
T  30356153 tttgcatgatttctccgtgaattacatcaaaacatcctagaattgatatgtttcgggaataatagaattacatgactcatatatataaaacatta 30356247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 4449230 - 4449278
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||||    
T  4449230 cctggcaaatttgccaggggtttcaa-accttgacaaaatccctggcaaa 4449278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 4968327 - 4968258
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| |||||||| |||||||||||  ||||| |||||||||||||||| |  |||  |||||||||||    
T  4968327 cctggcaaatttgcgaggggtttcaaacccttgacaaaatccctggcaaaaggtcattattcttgtagtg 4968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 9898074 - 9898021
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    |||| |||||||||| |||||||||||||| |||||| || |||||||||||||    
T  9898074 tttgtatgatttcttcgtgaattacatcaagaacaccctaaaattgctatgttt 9898021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 13216512 - 13216459
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttt 221  Q
    ||||||||||||||||| |||||||||| |||||||| || |||||||| ||||    
T  13216512 tttgcatgatttctttgcgaattacatcaaaaacaccctagaattgctaagttt 13216459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 13338109 - 13338158
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| |||||||||||||| |||||  |||||||||||||| |||||||    
T  13338109 cctggcaaatttgccaggggcttcaaacccttgtcaaaatccttggcaaa 13338158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 13507611 - 13507563
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||||    
T  13507611 cctggcaaatttgccaggggtttcaa-accttgacaaaatccctggcaaa 13507563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 17311449 - 17311518
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| |||||| ||||||||| |||  || |||||||||||||||||||    ||||||||||||||||    
T  17311449 cctggcaaatttcccaggggttccaaacccctgtcaaaatccctggcaaaatgtcatatttcttgtagtg 17311518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 3358033 - 3358085
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    |||||||||||||||   ||||||| |||||||||||||  ||||||||||||    
T  3358033 tttgcatgatttcttcacgaattacgtcaaaacaccataatattgctatgttt 3358085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 21760614 - 21760542
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| |||||| | || || ||||||||||||| |  |||| ||||||||||    
T  21760614 tttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgtttcgcgaaaactagaattaca 21760542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 37278397 - 37278276
Alignment:
Q  18 tgtcccacttttcctgaagtcatttttccaaggacgtcccctggctttgctcctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaa 117  Q
    |||| ||||||| |||||||| |||| ||| || | |||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||| ||||||    
T  37278397 tgtctcactttttctgaagtcgttttcccagggtcatcccctggctttgctcctcgaaaatttgtcaggggtttcaaggccctgtcaaaatccttggcaa 37278298  T
Q  118 atgaacatatttcttgtagtgt 139  Q
    ||| ||| ||||||||||||||    
T  37278297 atggacaaatttcttgtagtgt 37278276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 17831583 - 17831651
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaatt 237  Q
    ||||||||||||||||||||| || ||||||||||| || |||||||||||||||  ||||||| ||||    
T  17831583 tttgcatgatttctttgtgaaatatatcaaaacaccctaaaattgctatgttttgggaaaagtataatt 17831651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 24263951 - 24263860
Alignment:
Q  175 tgatttctttgtgaattacatcaa-aacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||| ||| | |||||||||| | | |||||||  ||||||||||||    
T  24263951 tgatttctttgtgaattacatcaagaacaccctaaaattgctatgttttggaaagaatagaattaca-gactcaaatatagaaaacattacaa 24263860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 28254781 - 28254853
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacat 241  Q
    ||||||||||||||| ||||||| ||||||||||| | | ||||||||||||| |  ||||||||||||||||    
T  28254781 tttgcatgatttcttcgtgaattgcatcaaaacactaaagaattgctatgtttcgggaaaagtagaattacat 28254853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 26253359 - 26253411
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    |||||||||||| || |||||||||||||||||||| || |||||||||||||    
T  26253359 tttgcatgattttttcgtgaattacatcaaaacaccctaaaattgctatgttt 26253411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 18939410 - 18939465
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttttg 223  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||    
T  18939410 tttgcatgatttcttcgtgaattacatcaagaacaccctaaaattgctatgttttg 18939465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 19761785 - 19761716
Alignment:
Q  171 tgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||| |||||||||| ||||||| | || |||||||||||||||  || | ||||||||||    
T  19761785 tgcatgatttcttcgtgaattacaacaaaacatcctaaaattgctatgttttgggaagaatagaattaca 19761716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 19007056 - 19006958
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatat--aattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||| ||||||| ||||||||| | ||||||||  ||  |||||||||||||||| |||| |||||||||| | | |||||||  ||||||||||||    
T  19007056 tttgcataatttcttcgtgaattactttaaaacaccccatcaaattgctatgttttgagaaaattagaattaca-gactcaaatatagaaaacattacaa 19006958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 19052991 - 19053063
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| |||||| | || || |||||||||||||||  |||| ||||||||||    
T  19052991 tttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgttttgggaaaactagaattaca 19053063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 34488753 - 34488800
Alignment:
Q  175 tgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||    
T  34488753 tgatttctttgtgaattacatcaagaacaccctaaaattgctatgttt 34488800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 18227502 - 18227556
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttg 223  Q
    ||||||||||||||| |||||||||||| ||||| | || |||||||| ||||||    
T  18227502 tttgcatgatttcttcgtgaattacatctaaacatcctaaaattgctaggttttg 18227556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 23387754 - 23387657
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| ||||||||  |||||| | ||||| |||||||||||||| | |||| |||| ||||| | | |||||||  ||||||||||||    
T  23387754 tttgcatgatttcttcgtgaattatttcaaaagccccataaaattgctatgttttaagaaaactagatttaca-gactcaaatatagaaaacattacaa 23387657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 26348332 - 26348386
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgtttt 222  Q
    ||||||||||||||| |||||||||||||||| |||| || ||||||||| ||||    
T  26348332 tttgcatgatttcttcgtgaattacatcaaaaccaccctagaattgctatttttt 26348386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 15520865 - 15520914
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctat 217  Q
    |||||||||||||||  ||||||||||| ||||||||||| |||||||||    
T  15520865 tttgcatgatttcttcttgaattacatcaaaaacaccataaaattgctat 15520914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 23338831 - 23338884
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgtttt 222  Q
    ||||||||||||||| ||||||||| | ||||| | ||| ||||||||||||||    
T  23338831 tttgcatgatttcttcgtgaattactttaaaaccctataaaattgctatgtttt 23338884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 29989208 - 29989135
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatg 242  Q
    |||| ||||||||||| ||||||||||||||| ||  || ||||| ||||||||  | ||| ||||||||||||    
T  29989208 tttgtatgatttctttttgaattacatcaaaatactttagaattgttatgtttttgagaaattagaattacatg 29989135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 33891917 - 33891965
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||||    
T  33891917 cctggcaaatttgccaggggtttcaa-accttgacaaaatccctggcaaa 33891965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 37574902 - 37574950
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||||    
T  37574902 cctggcaaatttgccaggggtttcaa-accttgacaaaatccctggcaaa 37574950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 17336532 - 17336480
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    |||||||||||| ||  ||||||||||||||||||| || ||||| |||||||    
T  17336532 tttgcatgatttattcttgaattacatcaaaacaccctagaattgatatgttt 17336480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 20860229 - 20860301
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    |||||||||||| || ||||||||| || ||||| || || ||||||||||||| || |||| ||||||||||    
T  20860229 tttgcatgatttattcgtgaattacttcaaaaaccccctaaaattgctatgtttcgagaaaactagaattaca 20860301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 22846002 - 22845930
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||| |||| |||| |||||||||||||| |||||| || |||||||||||||||  || | ||||||||||    
T  22846002 tttgcttgatctcttcgtgaattacatcaagaacaccctaaaattgctatgttttgggaagaatagaattaca 22845930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 28280172 - 28280224
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    |||||||||||||||  ||||||||||||||||||  || ||||| |||||||    
T  28280172 tttgcatgatttcttcttgaattacatcaaaacactctagaattgttatgttt 28280224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 35861668 - 35861574
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattac 264  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||| |  ||||||  ||||||||||    
T  35861668 tttgcatgatttctttgtgaattacatcaaaacacccta-gattgctatgttttggaaaaagtagaattacatgacttaaatatagaaaacattac 35861574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 28904174 - 28904077
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||||||    |||| || ||||||||| | |||||||  ||||||||||||    
T  28904174 tttgcatgatttgttcgtgaattacatcaaaacatcatataattgctatgtttcaggaaaaatataattacatgactcaaatatagaaaacattacaa 28904077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 13833809 - 13833713
Alignment:
Q  170 ttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||| ||||||||||||||||||||||| || ||||| |||||||||  ||||||| ||||| ||| |  ||||||  ||||||||||||    
T  13833809 ttgcatgatttatttgtgaattacatcaaaacaccttagaattgttatgttttgggaaaagtataattatatgactaaaatatagaaaacattacaa 13833713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 14077013 - 14077066
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgtttt 222  Q
    |||||||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  14077013 tttgcatgatttcttcatgaattacatcaaaacaccataaaattgctatgtttt 14077066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 24091084 - 24090988
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| ||||||||| ||||| | || || |||||||||||||||| |||| |||||||||| | | |||||||  ||||||||||||    
T  24091084 tttgcatgatttcttcgtgaattacttcaaacccccctaaaattgctatgttttgagaaaactagaattaca-gactcaaatatagaaaacattacaa 24090988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 24851151 - 24851054
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    |||||||||||| ||||||||||||||||||||| | || |||||||||||||||  || | |||||||| ||| | ||||| |  ||||||||||||    
T  24851151 tttgcatgatttatttgtgaattacatcaaaacatcctaaaattgctatgttttgggaagaatagaattatatgactcaaatgtagaaaacattacaa 24851054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 44462784 - 44462714
Alignment:
Q  68 tcctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    |||||| |||||| |||||||||||| | ||||||||||||||||||||||||  |||  |||||||||||    
T  44462784 tcctggaaaatttcccaggggtttcatgtccttgtcaaaatccctggcaaatgggcattattcttgtagtg 44462714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 44470315 - 44470245
Alignment:
Q  68 tcctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    |||||| |||||| |||||||||||| | ||||||||||||||||||||||||  |||  |||||||||||    
T  44470315 tcctggaaaatttcccaggggtttcatgtccttgtcaaaatccctggcaaatgggcattattcttgtagtg 44470245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 11722660 - 11722729
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||| |  |||  |||||||||||    
T  11722660 cctggcaaatttgccaggggtttcaaacccttgtcaaaatccctggcaaaaggtcattattcttgtagtg 11722729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 24518793 - 24518741
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||||||||||||||||||||||| |||||||| || ||||| |||||||    
T  24518793 tttgcatgatttctttgtgaattacatgaaaacaccttaaaattgttatgttt 24518741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 15176638 - 15176567
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| ||||||  || || |||||||||||||||  |||| ||||||||||    
T  15176638 tttgcatgatttcttcgtgaattacttcaaaaacccctaaaattgctatgttttgggaaaactagaattaca 15176567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 16375930 - 16375979
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||||    
T  16375930 cctggcaaatttgccaggggtttcaaacccttgacaaaatccctggcaaa 16375979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 17649692 - 17649757
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtaga 234  Q
    ||||||||||||||| || ||||||||||||||| | || ||||| ||||||| || |||||||||    
T  17649692 tttgcatgatttcttcgtaaattacatcaaaacatcctagaattgatatgtttcgagaaaagtaga 17649757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 24109241 - 24109169
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||||||||||||| || ||||| || || |||||||||||| ||  |||| ||||||||||    
T  24109241 tttgcatgatttctttgtgaattacttcaaaaaccccctaaaattgctatgttctgggaaaactagaattaca 24109169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 24381533 - 24381481
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgtt 220  Q
    ||||||||||||||| |||||||||||| |||||||| || ||||||||||||    
T  24381533 tttgcatgatttcttcgtgaattacatcaaaaacaccctaaaattgctatgtt 24381481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 35631430 - 35631502
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtgtta 141  Q
    ||||| |||||| |||||||||||||  || |||||||||| ||||||||||   || |||||||||||||||    
T  35631430 cctggtaaattttccaggggtttcaaacccctgtcaaaatctctggcaaatggtaatgtttcttgtagtgtta 35631502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 17976128 - 17976182
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttg 223  Q
    |||||||||||||||  |||||||||||||||||||  | || ||||||||||||    
T  17976128 tttgcatgatttcttattgaattacatcaaaacacccaagaaatgctatgttttg 17976182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 18570419 - 18570516
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| ||||||||| || ||||| || |  |||||||||||||||  |||| |||||||||| | | |||||||  ||||||||||||    
T  18570419 tttgcatgatttcttcgtgaattacttcaaaaaccccctcaaattgctatgttttgggaaaactagaattaca-gactcaaatatagaaaacattacaa 18570516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 7985007 - 7985080
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttttgaaaaaagtagaattacat 241  Q
    ||||| ||||||||| ||||||||| |||| |||||| || ||||||||||||| || || | |||||||||||    
T  7985007 tttgcttgatttcttcgtgaattacttcaagaacaccctaaaattgctatgtttcgagaagaatagaattacat 7985080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 9763248 - 9763183
Alignment:
Q  75 aaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtgtt 140  Q
    |||||||||| |||||||||  ||||| |||||||||||||||| |  |||  |||||||||||||    
T  9763248 aaatttgccaagggtttcaaacccttgacaaaatccctggcaaaaggtcattattcttgtagtgtt 9763183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 14271731 - 14271784
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    ||||||||||||||| |||||||||||||| |||||| || |||| ||||||||    
T  14271731 tttgcatgatttcttcgtgaattacatcaagaacaccctaaaatttctatgttt 14271784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 19784987 - 19784938
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctat 217  Q
    ||||||||||||||| |||||||||||| |||||||| || |||||||||    
T  19784987 tttgcatgatttcttcgtgaattacatcaaaaacaccctaaaattgctat 19784938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 30117865 - 30117812
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    ||||||||||||||| ||||||||| |||| |||||| || |||||||||||||    
T  30117865 tttgcatgatttcttcgtgaattacctcaagaacaccctaaaattgctatgttt 30117812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 30832829 - 30832901
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| || |||||  | || ||||||||||||| | ||||| ||||||||||    
T  30832829 tttgcatgatttcttcgtgaattacttcaaaaacctcctaaaattgctatgtttcggaaaaactagaattaca 30832901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 13000 - 12903
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||| |||||||||||||||||||||||||||| | || |||||||||||||    ||||||||||| ||||| | ||||||| |||||||||||||    
T  13000 tttgcttgatttctttgtgaattacatcaaaacatcctagaattgctatgtttcaggaaaagtagaataacatgactcaaatatgaaaaacattacaa 12903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 11983 - 12054
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    |||| |||||||||| || ||||| ||||||||||| || |||||||||||||||  || | ||||||||||    
T  11983 tttgtatgatttcttcgtaaattaaatcaaaacaccctagaattgctatgttttgggaagaatagaattaca 12054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 8e-18; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 44407514 - 44407448
Alignment:
Q  71 tgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagt 137  Q
    ||||||||||||||||||||||| | || ||||||||||| |||||||||| |||||||||||||||    
T  44407514 tgggaaatttgccaggggtttcatgtccctgtcaaaatccttggcaaatgagcatatttcttgtagt 44407448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 14235491 - 14235394
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||||| |  || | || ||||||||| | |||||||  ||||||||||||    
T  14235491 tttgcatgatttcttcgtgaattacatcaaaacaccctaaaattgctatgtttcgggaataatataattacatgactcaaatatagaaaacattacaa 14235394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 26652468 - 26652563
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| || ||||||||||||||||| ||||||| |||  |||||  |||| |||||||||||| | |||||||  ||||| ||||||    
T  26652468 tttgcatgatttcttcgtaaattacatcaaaacaccttataatttcta--ttttgggaaaaatagaattacatgactcaaatatataaaacgttacaa 26652563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 10063167 - 10063094
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatg 242  Q
    |||| ||||||| || || ||||||||||||||| | || ||||| ||||||||||||||| ||||||||||||    
T  10063167 tttgtatgatttattcgtaaattacatcaaaacatcctagaattgttatgttttgaaaaaaatagaattacatg 10063094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 27116429 - 27116357
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacat 241  Q
    ||||||||||||||||||||||||||| |||| ||| || ||||||||||||| |  || | |||||||||||    
T  27116429 tttgcatgatttctttgtgaattacataaaaaaaccctagaattgctatgtttcgggaagaatagaattacat 27116357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 27911955 - 27912025
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt-tgaaaaaagtagaatta 238  Q
    |||||||||||| ||  ||||||||||||||||||| || |||||||||||||  ||||||| ||||||||    
T  27911955 tttgcatgattttttcttgaattacatcaaaacaccctagaattgctatgtttccgaaaaaactagaatta 27912025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 2399595 - 2399664
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| |||||||||||||||  |||  ||||||||||||||||||||||    ||||||||||||||||    
T  2399595 cctggcaaatttgccaggggtaccaaacccttgtcaaaatccctggcaaaatgtcatatttcttgtagtg 2399664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 16786300 - 16786247
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||    
T  16786300 tttgcatgatttcttcgtgaattagatcaaaaacaccataaaattgctatgttt 16786247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 21848516 - 21848569
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttt 221  Q
    |||||||||||||||||||||||||||| |||||||| || |||| ||||||||    
T  21848516 tttgcatgatttctttgtgaattacatcaaaaacaccctaaaatttctatgttt 21848569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 26101750 - 26101823
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgttttgaaaaaagtagaattacat 241  Q
    ||||||||||||||| ||||| |||||||||| |||| |||||||||||||||| |  || | |||||||||||    
T  26101750 tttgcatgatttcttcgtgaactacatcaaaaacaccctataattgctatgtttcgggaagaatagaattacat 26101823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 31260833 - 31260760
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatg 242  Q
    |||||||||||||||  | ||||||||||||||||| || ||||| |||||||||  |||| || |||||||||    
T  31260833 tttgcatgatttcttcttaaattacatcaaaacaccttaaaattgatatgttttgggaaaactataattacatg 31260760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 34678676 - 34678745
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| ||||||||||||||| ||||  |||||||||||||||||||||| |  |||  |||||||||||    
T  34678676 cctggcaaatttgccaggggtatcaaacccttgtcaaaatccctggcaaaaggtcattattcttgtagtg 34678745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 17017039 - 17016967
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgtttt-gaaaaaagtagaattaca 240  Q
    |||||||||||| ||  || |||||||||||||||  || |||||||||||||| ||||||| ||||||||||    
T  17017039 tttgcatgatttattcttggattacatcaaaacactctagaattgctatgttttggaaaaaactagaattaca 17016967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 13267736 - 13267807
Alignment:
Q  170 ttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    |||||||||||||| ||||||||| || ||||| ||||| ||||| |||||||||  |||| ||||||||||    
T  13267736 ttgcatgatttcttcgtgaattacttcaaaaaccccataaaattgttatgttttgggaaaactagaattaca 13267807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 16915403 - 16915332
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacacc-atataattgctatgttttgaaaaaagtagaattac 239  Q
    ||||||||||||||| ||||||||| |||||| |||  |  ||||||||||||| || ||||||||||||||    
T  16915403 tttgcatgatttcttcgtgaattacttcaaaaaacctctcaaattgctatgtttcgagaaaagtagaattac 16915332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 33192242 - 33192339
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||| ||||||||||||||||||| || |||||||| || ||||||||||||| |  || | |||||||||| | | |||||||  ||||||||||||    
T  33192242 tttgcttgatttctttgtgaattacttcaaaaacaccctaaaattgctatgtttagggaagaatagaattaca-gactcaaatatagaaaacattacaa 33192339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 7881685 - 7881738
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| |||||||||||| |||||| | || |||||||||||||    
T  7881685 tttgcatgatttcttcgtgaattacatcaaaaacatcctaaaattgctatgttt 7881738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 15527003 - 15526950
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    |||||||||||||||||||||||||| ||| |||| | || |||||||||||||    
T  15527003 tttgcatgatttctttgtgaattacaacaagaacatcctaaaattgctatgttt 15526950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 15542515 - 15542442
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgttttgaaaaaagtagaattacat 241  Q
    ||||| ||||||||| ||||||||| |||||| | || || ||||||||||||| | ||||| |||||||||||    
T  15542515 tttgcgtgatttcttcgtgaattacttcaaaaaccccttaaaattgctatgtttcggaaaaactagaattacat 15542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 15811652 - 15811599
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    ||||||||||||||| |||||||||||||| ||| || || |||||||||||||    
T  15811652 tttgcatgatttcttcgtgaattacatcaagaaccccctaaaattgctatgttt 15811599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 24464518 - 24464590
Alignment:
Q  179 ttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatat 252  Q
    ||||| |||| ||| ||||||||| |||||||||||||||||| |   |||||||||||||||| | |||||||    
T  24464518 ttcttcgtgagttatatcaaaacaacatataattgctatgtttcg-ggaaagtagaattacatgactcaaatat 24464590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 25959664 - 25959611
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    ||||| ||||||||| |||||||| ||||| ||||||||| |||||||||||||    
T  25959664 tttgcttgatttcttcgtgaattaaatcaagaacaccataaaattgctatgttt 25959611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 35133778 - 35133827
Alignment:
Q  173 catgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    ||||||||||| |||||||||||||| |||||| || |||||||||||||    
T  35133778 catgatttcttcgtgaattacatcaagaacaccctaaaattgctatgttt 35133827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 49329536 - 49329585
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| ||||||||||||||||||||  | ||| ||||||||||||||||    
T  49329536 cctggcaaatttgccaggggtttcaaaccattgacaaaatccctggcaaa 49329585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 18527703 - 18527631
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| || ||||| || || ||||||||||||| |  |||| ||||||||||    
T  18527703 tttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactagaattaca 18527631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 21450657 - 21450729
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| |||||| | || || ||||||||||||| |  |||| ||||||||||    
T  21450657 tttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgtttcggtaaaattagaattaca 21450729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 22507581 - 22507509
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| || ||||| || || ||||||||||||| |  |||| ||||||||||    
T  22507581 tttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactagaattaca 22507509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 25259531 - 25259463
Alignment:
Q  70 ctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    |||| ||||||||||||||||| | | || ||||||||||| ||||||||   ||| ||||||||||||    
T  25259531 ctggcaaatttgccaggggttttatgtccctgtcaaaatccttggcaaatatgcatttttcttgtagtg 25259463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 47165530 - 47165461
Alignment:
Q  71 tgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtgtt 140  Q
    ||||||||| ||||||||||||| | || ||||||||||||| |||||||| ||||||||||||||||||    
T  47165530 tgggaaattcgccaggggtttcatgtccctgtcaaaatccctagcaaatgagcatatttcttgtagtgtt 47165461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 3002947 - 3003029
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaata 251  Q
    |||||||||||||||  ||||||||||||||||||| || |||||||||||||    ||||||||||||||||| | ||||||    
T  3002947 tttgcatgatttcttcttgaattacatcaaaacaccgtagaattgctatgtttcaggaaaagtagaattacatgactcaaata 3003029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 26092794 - 26092846
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  26092794 tttgcatgatttcttcttgaattacatcaaaacaccatagaattgctatgttt 26092846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 33908890 - 33908960
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtgt 139  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||| |  |||  ||||||||||||    
T  33908890 cctggcaaatttgccaggggtttcaaacccttgtcaaaatccctggcaaagggtcattattcttgtagtgt 33908960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 18554392 - 18554441
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| |||||||||||||| |||||  ||||||||||||||||||||||    
T  18554392 cctggcaaatttgccaggggcttcaaacccttgtcaaaatccctggcaaa 18554441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 23702389 - 23702340
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| |||||||||||||| |||||  ||||||||||||||||||||||    
T  23702389 cctggaaaatttgccaggggcttcaaacccttgtcaaaatccctggcaaa 23702340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 23720845 - 23720796
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| |||||||||||||| |||||  ||||||||||||||||||||||    
T  23720845 cctggaaaatttgccaggggcttcaaacccttgtcaaaatccctggcaaa 23720796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 23739301 - 23739252
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    ||||| |||||||||||||| |||||  ||||||||||||||||||||||    
T  23739301 cctggaaaatttgccaggggcttcaaacccttgtcaaaatccctggcaaa 23739252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 18735477 - 18735425
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgtt 220  Q
    |||||||||||||||||||||||||||||| |||| | || ||||||||||||    
T  18735477 tttgcatgatttctttgtgaattacatcaagaacaacctaaaattgctatgtt 18735425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 19388057 - 19387985
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    |||| |||||||||| |||||||||||||| ||||||||| ||||| |||||||||  || | ||||||||||    
T  19388057 tttgaatgatttcttcgtgaattacatcaagaacaccataaaattgatatgttttgggaagaatagaattaca 19387985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 20886759 - 20886811
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| ||||||||||||||||| || || |||||| ||||||    
T  20886759 tttgcatgatttcttcgtgaattacatcaaaacgccttaaaattgccatgttt 20886811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 31284111 - 31284039
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| || ||||||||| |||||||| || |||||||||||||||  || | ||||||||||    
T  31284111 tttgcatgatttcttcgtcaattacatcaaaaacaccctaaaattgctatgttttgggaataatagaattaca 31284039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 8881607 - 8881536
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| ||||||| || || ||||||||| |||||  |||| || |||||||    
T  8881607 tttgcatgatttcttcgtgaattacttcaaaaccccctaaaattgctatattttgggaaaactataattaca 8881536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 3114916 - 3114863
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    ||||||||||||||| |||||| ||||||| |||||| || |||||||||||||    
T  3114916 tttgcatgatttcttcgtgaataacatcaagaacaccctaaaattgctatgttt 3114863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 5509959 - 5510012
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    ||||||||||||||| |||||||||||||| |||| | || |||||||||||||    
T  5509959 tttgcatgatttcttcgtgaattacatcaagaacatcctaaaattgctatgttt 5510012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 15669491 - 15669438
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgtttt 222  Q
    ||||||| |||||||| ||||||||| | ||||||| || ||||||||||||||    
T  15669491 tttgcatcatttctttttgaattacaacgaaacaccctaaaattgctatgtttt 15669438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 23054779 - 23054711
Alignment:
Q  173 catgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatg 242  Q
    ||||||||||| |||||||||||||||| | | || ||||| ||||||| | ||||||||||||| ||||    
T  23054779 catgatttcttcgtgaattacatcaaaatatcttaaaattgatatgtttcg-aaaaagtagaatttcatg 23054711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 6579595 - 6579551
Alignment:
Q  75 aaatttgccaggggtttcaaggccttgtcaaaatccctggcaaat 119  Q
    ||||||| ||||||||| | |||| ||||||||||||||||||||    
T  6579595 aaatttgtcaggggttttacggccctgtcaaaatccctggcaaat 6579551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 8765566 - 8765661
Alignment:
Q  171 tgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||| ||||||||| || ||||| || || |||||||||||||  | |||| |||||||||| | | |||||||  ||||||||||||    
T  8765566 tgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcaagaaaactagaattaca-gactcaaatatagaaaacattacaa 8765661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 266
Target Start/End: Complemental strand, 13906788 - 13906693
Alignment:
Q  171 tgcatgatttctttgtgaa-ttacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||||||| ||||| ||||||| | || ||||||||||||| |  || | |||||||||| | | |||||||  ||||||||||||    
T  13906788 tgcatgatttctttgtgaatttacaacaaaacatcctaaaattgctatgtttcgggaagaatagaattaca-gactcaaatatagaaaacattacaa 13906693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 13939053 - 13938981
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| || ||||| ||||| |||||| |||||| | ||||| ||||| ||||    
T  13939053 tttgcatgatttcttcgtgaattacttcaaaaaccccataaaattgcaatgtttcggaaaaactagaactaca 13938981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 28326340 - 28326288
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| || ||||||||||||||||| || |||  ||||||||    
T  28326340 tttgcatgatttcttcgtcaattacatcaaaacaccctaaaataactatgttt 28326288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 38181 - 38278
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||| ||||||| |  ||||  ||||||||||| | |||||||  ||||||||||||    
T  38181 tttgcgtgatttcttcgtgaattacatcaaaacaccctaaaattgttatgtttcgggaaaaagagaattacatgactcaaatatagaaaacattacaa 38278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 6839 - 6909
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtgt 139  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||| |  |||  ||||||||||||    
T  6839 cctggcaaatttgccaggggtttcaaaaccttgtcaaaatccctggcaaagggtcattattcttgtagtgt 6909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 32130907 - 32130854
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgtttt 222  Q
    |||| ||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  32130907 tttgtatgatttctttgtgaattacatcaaaacatcctataattgttatgtttt 32130854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 35593280 - 35593211
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||| |  |||  |||||||||||    
T  35593280 cctggcaaatttgccaggggtttcaaacccttgtcaaaatccctggcaaagggtcattattcttgtagtg 35593211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 34369217 - 34369291
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaag-tagaattacatg 242  Q
    ||||||||||||| |  ||||||| |||||||||||||| ||||||||||||| |  ||||| ||||||||||||    
T  34369217 tttgcatgatttcatcttgaattatatcaaaacaccataaaattgctatgtttcgggaaaagctagaattacatg 34369291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 4969050 - 4969119
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| ||||||||||||||||||||  ||||||||||||| |||||||| |  |||  |||||||||||    
T  4969050 cctggcaaatttgccaggggtttcaaacccttgtcaaaatctctggcaaagggtcattattcttgtagtg 4969119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 8501717 - 8501644
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatg 242  Q
    |||||||||||| ||||||||||||||||||||||| || ||||  |||||||    |||| ||||||||||||    
T  8501717 tttgcatgatttatttgtgaattacatcaaaacaccctaaaatttatatgtttcttgaaaaatagaattacatg 8501644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 11882222 - 11882287
Alignment:
Q  75 aaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtgtt 140  Q
    ||||||||||||||| ||||  |||||||||||||||||||||| |  |||  |||||||||||||    
T  11882222 aaatttgccaggggtatcaaacccttgtcaaaatccctggcaaaaggtcattattcttgtagtgtt 11882287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 17199417 - 17199513
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    |||||||||||||||  |||||||| ||||||| || |  |||||||||||||||  |||| |||||||||| | | |||||||  ||||||||||||    
T  17199417 tttgcatgatttcttcatgaattacttcaaaaccccctcaaattgctatgttttgggaaaactagaattaca-gactcaaatatagaaaacattacaa 17199513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 32138120 - 32138067
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgtttt 222  Q
    ||||||||||||||| ||||||||| |||||||| | |||||||| ||||||||    
T  32138120 tttgcatgatttcttcgtgaattacgtcaaaacatcctataattgttatgtttt 32138067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 32141598 - 32141501
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| ||||||| |||||||||| | || |||||||||||||    || | | |||||||||| | |||||||  ||||||||||||    
T  32141598 tttgcatgatttcttcgtgaatttcatcaaaacatcttagaattgctatgtttcaggaagaattgaattacatgactcaaatatagaaaacattacaa 32141501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 32438883 - 32438814
Alignment:
Q  173 catgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattacatg 242  Q
    ||||||||||| |||||||||||  ||||||| || ||||||||||||| |  ||||||||| |||||||    
T  32438883 catgatttcttcgtgaattacatttaaacaccctagaattgctatgtttcgggaaaagtagagttacatg 32438814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 16042867 - 16042815
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    |||||||||||||||  |||||||||| |||||||| || |||||||||||||    
T  16042867 tttgcatgatttcttcttgaattacattaaaacaccctaaaattgctatgttt 16042815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 29717562 - 29717510
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||| ||||||| |||||||||||||||| ||| || |||||||||||||    
T  29717562 tttgcattatttcttcgtgaattacatcaaaaaaccttagaattgctatgttt 29717510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 18553178 - 18553233
Alignment:
Q  168 ctttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgtttt 222  Q
    ||||||||||||||||  |||||||||| || ||||||||| ||||||||||||||    
T  18553178 ctttgcatgatttcttcatgaattacattaagaacaccataaaattgctatgtttt 18553233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 25537446 - 25537543
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| ||||||||| |||||| | || || ||||||||||||| |  |||| |||||||||| | | |||||||  ||||||||||||    
T  25537446 tttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgtttcgggaaaactagaattaca-gactcaaatatagaaaacattacaa 25537543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 27871175 - 27871249
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt-tgaaaaaagtagaattacatg 242  Q
    ||||||||||||||   ||||||||||||||||||  || ||||| |||||||  ||||||| ||||||||||||    
T  27871175 tttgcatgatttctccttgaattacatcaaaacactctagaattgttatgtttcggaaaaaattagaattacatg 27871249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 34574403 - 34574500
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||||||||||||| |||||| | || || |||||||| |||| |  |||| |||||||||||  | |||||||  ||||||||||||    
T  34574403 tttgcatgatttctttgtgaattacttcaaaacccccctaaaattgctaagtttcgggaaaactagaattacat-actcaaatatataaaacattacaa 34574500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 19198684 - 19198631
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttt 221  Q
    ||||||||||||||||||||||| |||||| ||||||  | |||||||||||||    
T  19198684 tttgcatgatttctttgtgaatttcatcaagaacacctaaaaattgctatgttt 19198631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 22627277 - 22627326
Alignment:
Q  171 tgcatgatttctttgtgaattacatcaaaacaccatataattgctatgtt 220  Q
    ||||||||||||| |||||||||| ||||||| | || ||||||||||||    
T  22627277 tgcatgatttcttcgtgaattacaacaaaacatcctaaaattgctatgtt 22627326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 37393270 - 37393339
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| ||||||||||||||| ||||  |||||||||||||| ||||||| |  |||  |||||||||||    
T  37393270 cctggcaaatttgccaggggtatcaaacccttgtcaaaatccttggcaaaaggtcattattcttgtagtg 37393339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 25532126 - 25532198
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa-aacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||| | |||| |||||| || ||||||||||||| |  |||| ||||||||||    
T  25532126 tttgcatgatttcttcgtgaattgcttcaagaacaccctaaaattgctatgtttcgggaaaactagaattaca 25532198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 25922495 - 25922547
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    ||||||||||||||| ||||||||| ||||||| || |  |||||||||||||    
T  25922495 tttgcatgatttcttcgtgaattacttcaaaaccccctcaaattgctatgttt 25922547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 27907729 - 27907657
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||||||| || |||| ||| || ||||||||||||| |  |||| ||||||||||    
T  27907729 tttgcatgatttcttcgtgaattacttcaaaaaaaccctaaaattgctatgtttcgggaaaactagaattaca 27907657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 30682409 - 30682357
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttt 221  Q
    |||||||||||||||  |||| ||||||| |||||| || |||||||||||||    
T  30682409 tttgcatgatttcttcttgaactacatcataacaccctagaattgctatgttt 30682357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 244037 - 243984
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttt 221  Q
    |||||||||||||||||||||||||||| |||||||  || |||||||||||||    
T  244037 tttgcatgatttctttgtgaattacatcaaaaacacactaaaattgctatgttt 243984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 6905 - 6948
Alignment:
Q  75 aaatttgccaggggtttcaaggccttgtcaaaatccctggcaaa 118  Q
    |||||||||||||| |||||  ||||||||||||||||||||||    
T  6905 aaatttgccaggggcttcaaacccttgtcaaaatccctggcaaa 6948  T

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Target: scaffold0062 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 41743 - 41688
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttga 224  Q
    ||||||||||||||| |||| |||| |||||| ||| || ||||||||||||||||    
T  41743 tttgcatgatttcttcgtgatttacctcaaaaaaccctaaaattgctatgttttga 41688  T

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Target: scaffold0637 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 7276 - 7346
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaacaccatataattgctatgttttgaaaaaagtagaattac 239  Q
    ||||||||||||||| |||||||| ||  ||||||| || ||||||||||||| |  |||| |||||||||    
T  7276 tttgcatgatttcttcgtgaattagatgtaaacaccctagaattgctatgtttcgggaaaattagaattac 7346  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 4714 - 4811
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaaaa-caccatataattgctatgttttgaaaaaagtagaattacatggcgcaaatattaaaaacattacaa 266  Q
    ||||||||||||||| ||||||||  |||||| | ||||| |||||||||||||| | |||| |||| ||||| | | |||||||  ||||||||||||    
T  4714 tttgcatgatttcttcgtgaattatttcaaaagccccataaaattgctatgttttaagaaaactagatttaca-gactcaaatatagaaaacattacaa 4811  T

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Target: scaffold0258 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 20458 - 20385
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattacat 241  Q
    ||||||||||||||| ||||||||| || ||||| || |  |||||||||||||||  |||| |||||||||||    
T  20458 tttgcatgatttcttcgtgaattacttcaaaaaccccctcaaattgctatgttttgggaaaactagaattacat 20385  T

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Target: scaffold0214 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 388 - 456
Alignment:
Q  69 cctgggaaatttgccaggggtttcaaggccttgtcaaaatccctggcaaatgaacatatttcttgtagtg 138  Q
    ||||| ||||||||||||||||||||  ||||| |||||||||||||||| |  |||  |||||||||||    
T  388 cctggcaaatttgccaggggtttcaaa-ccttgacaaaatccctggcaaaaggccattattcttgtagtg 456  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Complemental strand, 88643 - 88614
Alignment:
Q  169 tttgcatgatttctttgtgaattacatcaa 198  Q
    ||||||||||||||||||||||||||||||    
T  88643 tttgcatgatttctttgtgaattacatcaa 88614  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 22926 - 22998
Alignment:
Q  169 tttgcatgatttctttgtgaattacatc-aaaacaccatataattgctatgttttgaaaaaagtagaattaca 240  Q
    ||||||||||||||| ||||| ||| || ||||| || |||||||||||||||| |  |||| ||||||||||    
T  22926 tttgcatgatttcttcgtgaaatacttcaaaaactccttataattgctatgtttcgggaaaactagaattaca 22998  T

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