View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19431_high_14 (Length: 287)
Name: NF19431_high_14
Description: NF19431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19431_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 14059975 - 14059719
Alignment:
| Q |
18 |
agcattaccatttaaagctaatgcttaactgctacataaccatgatttaatttaaagaaaattgacctttagcccgtagttcctattgattaatcagcaa |
117 |
Q |
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| T |
14059975 |
agcattaccatttaaagctaatgcttaactgctacataaccatgatttaatttaaagaaaattgacctttagcccgtagttcctattgattaatcagcaa |
14059876 |
T |
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| Q |
118 |
tattaaaagtcaattcttgaacaagaaaattt-aaccaattcatacattttatttctgatgggtgatggatcaataaatggataaacttttgacaatgtt |
216 |
Q |
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|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14059875 |
tattaaaagtcaattcttgaacaagaaaatttaaatcaattcatacattttatttctgatgggtgatggatcaataaatggataaacttttgacaatgtt |
14059776 |
T |
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| Q |
217 |
gctttggaataggcttttcagttcttgtataactaaacctgtcttatacatttttat |
273 |
Q |
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| T |
14059775 |
gctttggaataggcttttcagttcttgtataactaaacctgtcttatacatttttat |
14059719 |
T |
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