View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19431_low_14 (Length: 292)
Name: NF19431_low_14
Description: NF19431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19431_low_14 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 13584907 - 13585083
Alignment:
| Q |
11 |
cataggcccaacaatgttttggttgttgaaaagtgtttatgttagattaattcttcttgtttttctgcaaatttggatatataagagaactgatatgaca |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13584907 |
cataggcccaacaatgttttggttgttgaaaagtgtttatgttagattaattcttcttgtttttctgcaaatttggatatataagagaactggtatgaca |
13585006 |
T |
|
| Q |
111 |
atgatgagtttgatgttctctatttttccacatgtcctttatttgttctatgatgttattcctacctttggtggtgc |
187 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13585007 |
atgatgagtttgatgttctccatttttccacatgtcctttatttattctatgatgttattcctacctttggtggtgc |
13585083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University