View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19431_low_4 (Length: 397)
Name: NF19431_low_4
Description: NF19431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19431_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 16 - 391
Target Start/End: Original strand, 41578825 - 41579200
Alignment:
| Q |
16 |
atgggctgatgatacaattatttcaacactgaagagaaacagatctacggcgaagtgatcaaagaattttagagattctcccaagtcactatgaatgaga |
115 |
Q |
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| T |
41578825 |
atgggctgatgatacaattatttcaacactgaagataaaccgatctacggcgaagtgatcaaagaattttagagattgtcccaagtcactatgaatgaga |
41578924 |
T |
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| Q |
116 |
ttacaactaatactttgggtacaactacgaaaatcacaagaaaaattattgctttagtcacaacaaccttggatgaaagcattattttaatttgaacaag |
215 |
Q |
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| T |
41578925 |
ttacaactaatactttgggtacaactacgaaaatcacaagaaaaattattgctttagtcacaacaaccttggatgaaagcattattttaatttgaacaag |
41579024 |
T |
|
| Q |
216 |
agttactggaaaagattggagtcaagaaagaagattcttaaaaaactccataagtcctgttgttataaactctgcctctcgtatgaagaataagtatagc |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
41579025 |
agttactggaaaagattggagtcaagaaagaagattcttaaaaaactccataagtcctgttgttataaactctgcctctcgtatgaagaattagtatagc |
41579124 |
T |
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| Q |
316 |
gtacttttttaaaccgataatgtgttgcattattttcaaaagtgcttctacttctagataggttagctgctgggaa |
391 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41579125 |
gtacttttttaaaccgataatgtgttgcattattttcaaaagtgcttctacttctagataggttagctgctgggaa |
41579200 |
T |
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