View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19432_low_2 (Length: 446)
Name: NF19432_low_2
Description: NF19432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19432_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 10 - 430
Target Start/End: Complemental strand, 46038292 - 46037872
Alignment:
| Q |
10 |
gaagaagagatgtactataatagcaagtagagtatgataaaaacgattattttaatcatggattgaactataatattccaagataatttgaccttaatga |
109 |
Q |
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| T |
46038292 |
gaagcagagatgtactataatagcaagtagagtatgataaaaacgattattttaatcatggattgaactataatattccaagataatttgatcttaatga |
46038193 |
T |
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| Q |
110 |
agttttactaactatttaaattcaaccatttagttagatttttagatcaaagtatgcttgagttgtgtaagtttggtgtggatttctaggaggaacttaa |
209 |
Q |
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| T |
46038192 |
agttttactaactatttaaattcaaccatttagttagatttttacatcaaagtatgcttgagttgtgtaagtttggtgtggatttctaggaggaacttaa |
46038093 |
T |
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| Q |
210 |
cagcggttataaaatcaaatttgagtttcttacaatcttgtcattgaagatgttctaaggatcatgctagcttctattccaaaagcacatgttaaagatt |
309 |
Q |
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| T |
46038092 |
cagcggttataaaatcaaatttgagtttcttacaatcttgtcattgaagatgttctaaggatcatgctagcttatattccaaaagcacatgttaaagatt |
46037993 |
T |
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| Q |
310 |
tccacaaataataattatgcattgaaaatagtaattttcaactttttgaagaatgtacaaagttttcaatatgcaatttctatatttagtgcacttacaa |
409 |
Q |
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| T |
46037992 |
tccacaaatagtaattatgcattgaaaaaagtaattttcaactttttgaagaatgtacaaagttttcaatatgcaatttctatatttagtgcacttacaa |
46037893 |
T |
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| Q |
410 |
acaaacaatgatgttagtttt |
430 |
Q |
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| T |
46037892 |
acaaacaatgatgttagtttt |
46037872 |
T |
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