View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19434_high_17 (Length: 322)
Name: NF19434_high_17
Description: NF19434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19434_high_17 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 40929425 - 40929123
Alignment:
| Q |
20 |
actcgaaacattcttactttcacaatatgaataagtccactagtatctttaggcactaaatatgcttcagactatgaggaccttgccagtagttgctatc |
119 |
Q |
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| T |
40929425 |
actcgaaacattcttactttcacaatatgaataagtccactagtatctttaggcactaaatatgcttcagactatgaggaccttgccagtagttgctatc |
40929326 |
T |
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| Q |
120 |
attgataatgcctatgtttgatgaaaatggtctttgtttgatggcagtacagttagttatatttgtcataatcgcagagttggcagtgtgattatgtcga |
219 |
Q |
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| T |
40929325 |
attgataatgcctatgtttgatgaaaatggtctttgtttgatggcagtacagttagttatatttgtcataatcgcagagttggcagtgtgattatgtcga |
40929226 |
T |
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| Q |
220 |
gttatgtatttaatcgatgttataatattttgccttcttaaccaactggcctttcctgctgagtggctgcataaattgcattgttggcattgttattcta |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40929225 |
gttatgtatttaatcgatgttataatattttgccttcttaaccaactggcctttcctgctgagtggctgcataaattgcattgttggcattgttattcta |
40929126 |
T |
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| Q |
320 |
cac |
322 |
Q |
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| T |
40929125 |
cac |
40929123 |
T |
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