View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19434_high_2 (Length: 823)

Name: NF19434_high_2
Description: NF19434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19434_high_2
NF19434_high_2
[»] chr6 (64 HSPs)
chr6 (1-444)||(5674229-5674673)
chr6 (1-436)||(22709200-22709636)
chr6 (45-444)||(11857158-11857567)
chr6 (45-444)||(22010189-22010598)
chr6 (48-444)||(14741926-14742335)
chr6 (144-432)||(3073042-3073330)
chr6 (162-432)||(411698-411970)
chr6 (162-444)||(16578820-16579101)
chr6 (162-444)||(16616279-16616560)
chr6 (243-436)||(2171902-2172095)
chr6 (162-444)||(16554454-16554735)
chr6 (162-444)||(16631010-16631291)
chr6 (277-444)||(30125018-30125185)
chr6 (162-432)||(34166678-34166949)
chr6 (162-445)||(33342405-33342689)
chr6 (233-432)||(27647480-27647679)
chr6 (208-444)||(25420797-25421034)
chr6 (144-444)||(6136246-6136547)
chr6 (162-444)||(6026834-6027116)
chr6 (233-444)||(5266461-5266653)
chr6 (45-382)||(14737128-14737478)
chr6 (162-432)||(34164456-34164727)
chr6 (169-444)||(6438807-6439083)
chr6 (233-432)||(13150861-13151061)
chr6 (144-337)||(25420999-25421192)
chr6 (322-432)||(6097863-6097973)
chr6 (162-382)||(16652759-16652978)
chr6 (186-382)||(5266433-5266610)
chr6 (169-437)||(16839054-16839323)
chr6 (169-437)||(33329940-33330209)
chr6 (300-432)||(23896812-23896944)
chr6 (322-432)||(26253602-26253712)
chr6 (169-437)||(6005730-6005999)
chr6 (169-437)||(33335437-33335706)
chr6 (169-350)||(28155165-28155347)
chr6 (3-436)||(5756960-5757383)
chr6 (169-446)||(5343788-5344066)
chr6 (390-444)||(14737085-14737139)
chr6 (3-142)||(31979704-31979840)
chr6 (3-142)||(5572012-5572148)
chr6 (5-140)||(31086245-31086377)
chr6 (300-437)||(5016976-5017112)
chr6 (390-437)||(28155097-28155144)
chr6 (300-437)||(31085953-31086089)
chr6 (14-142)||(31936778-31936903)
chr6 (241-315)||(6097803-6097877)
chr6 (486-540)||(14021195-14021249)
chr6 (390-444)||(16652716-16652770)
chr6 (300-437)||(10076672-10076809)
chr6 (367-432)||(34151840-34151905)
chr6 (162-221)||(2171839-2171897)
chr6 (14-104)||(5017303-5017390)
chr6 (3-62)||(18233038-18233096)
chr6 (390-437)||(24714941-24714989)
chr6 (162-221)||(6097742-6097800)
chr6 (15-62)||(14521877-14521924)
chr6 (390-437)||(18234653-18234700)
chr6 (392-439)||(21272467-21272514)
chr6 (14-104)||(22963902-22963989)
chr6 (14-104)||(23824404-23824491)
chr6 (162-220)||(27647673-27647729)
chr6 (300-362)||(3809370-3809432)
chr6 (300-362)||(22964177-22964239)
chr6 (300-362)||(23824154-23824216)
[»] chr2 (44 HSPs)
chr2 (1-444)||(9295862-9296305)
chr2 (1-444)||(11098387-11098831)
chr2 (1-445)||(14291681-14292126)
chr2 (22-436)||(25409842-25410257)
chr2 (1-436)||(3491942-3492368)
chr2 (144-432)||(4484622-4484910)
chr2 (163-436)||(32289157-32289431)
chr2 (162-436)||(30832930-30833205)
chr2 (6-436)||(40739029-40739448)
chr2 (162-432)||(6266287-6266558)
chr2 (45-444)||(39811477-39811890)
chr2 (162-444)||(12647685-12647967)
chr2 (366-444)||(44310471-44310549)
chr2 (368-444)||(32247276-32247352)
chr2 (3-382)||(28258713-28259082)
chr2 (169-437)||(19344733-19345002)
chr2 (169-437)||(19349591-19349860)
chr2 (3-137)||(36757536-36757667)
chr2 (390-439)||(8389629-8389678)
chr2 (14-140)||(33528395-33528518)
chr2 (390-439)||(10706731-10706780)
chr2 (14-142)||(14698778-14698903)
chr2 (14-142)||(33118338-33118463)
chr2 (392-437)||(33528105-33528150)
chr2 (393-437)||(20522794-20522838)
chr2 (14-137)||(21630148-21630268)
chr2 (390-438)||(21630514-21630562)
chr2 (14-137)||(34389054-34389174)
chr2 (385-437)||(36757425-36757477)
chr2 (390-438)||(39483446-39483494)
chr2 (3-137)||(23078245-23078376)
chr2 (385-436)||(28258678-28258729)
chr2 (14-142)||(10445236-10445361)
chr2 (390-439)||(23077950-23077999)
chr2 (14-140)||(13569532-13569655)
chr2 (300-349)||(2837290-2837339)
chr2 (300-410)||(29867491-29867601)
chr2 (169-315)||(32247097-32247244)
chr2 (300-352)||(33528189-33528241)
chr2 (300-382)||(45099393-45099476)
chr2 (393-439)||(13569902-13569948)
chr2 (207-350)||(34389236-34389380)
chr2 (15-104)||(2837834-2837923)
chr2 (14-63)||(35397712-35397760)
[»] chr5 (71 HSPs)
chr5 (1-444)||(24136040-24136484)
chr5 (45-444)||(27449998-27450409)
chr5 (45-444)||(27445154-27445566)
chr5 (1-315)||(35387854-35388169)
chr5 (1-444)||(31180406-31180830)
chr5 (45-444)||(43598908-43599318)
chr5 (45-444)||(43604400-43604810)
chr5 (45-444)||(43609892-43610302)
chr5 (1-359)||(38219590-38219944)
chr5 (144-436)||(26177475-26177767)
chr5 (162-432)||(18441949-18442220)
chr5 (144-436)||(26170366-26170658)
chr5 (162-432)||(9789525-9789796)
chr5 (169-444)||(1456638-1456914)
chr5 (247-432)||(29719978-29720164)
chr5 (162-444)||(40379678-40379960)
chr5 (242-436)||(16407650-16407844)
chr5 (162-444)||(16546216-16546498)
chr5 (259-447)||(30631763-30631951)
chr5 (162-444)||(40381889-40382171)
chr5 (45-444)||(43592463-43592854)
chr5 (45-444)||(15044869-15045279)
chr5 (242-436)||(16409086-16409280)
chr5 (168-432)||(29751467-29751711)
chr5 (162-445)||(10592843-10593125)
chr5 (162-444)||(16543994-16544276)
chr5 (260-444)||(22536668-22536852)
chr5 (162-432)||(25077718-25077988)
chr5 (162-432)||(25135687-25135957)
chr5 (266-444)||(29402550-29402728)
chr5 (266-432)||(29722165-29722332)
chr5 (3-436)||(9352816-9353237)
chr5 (322-433)||(36931855-36931966)
chr5 (322-436)||(15465002-15465116)
chr5 (322-432)||(29752267-29752377)
chr5 (169-437)||(33768495-33768764)
chr5 (169-437)||(33791627-33791896)
chr5 (45-160)||(1456949-1457063)
chr5 (259-437)||(28807083-28807261)
chr5 (169-437)||(2785686-2785955)
chr5 (1-129)||(30631598-30631728)
chr5 (169-436)||(37560955-37561223)
chr5 (261-436)||(37556133-37556308)
chr5 (169-437)||(31396497-31396766)
chr5 (169-437)||(31401354-31401623)
chr5 (3-240)||(15464726-15464952)
chr5 (1-140)||(36932119-36932255)
chr5 (3-140)||(14520422-14520556)
chr5 (9-142)||(31300364-31300494)
chr5 (14-142)||(24553296-24553421)
chr5 (14-142)||(28832460-28832585)
chr5 (3-137)||(11916746-11916877)
chr5 (390-437)||(14520799-14520846)
chr5 (401-444)||(43625605-43625648)
chr5 (300-436)||(11916453-11916589)
chr5 (390-439)||(12083656-12083705)
chr5 (395-432)||(35388196-35388233)
chr5 (14-142)||(42127139-42127264)
chr5 (14-140)||(11181603-11181726)
chr5 (14-140)||(17003730-17003853)
chr5 (162-220)||(22536591-22536647)
chr5 (322-359)||(35388155-35388192)
chr5 (300-349)||(42428864-42428913)
chr5 (300-352)||(213014-213066)
chr5 (304-402)||(28751032-28751132)
chr5 (14-104)||(19588948-19589035)
chr5 (14-104)||(10281955-10282044)
chr5 (162-224)||(29722330-29722391)
chr5 (14-126)||(7160689-7160798)
chr5 (144-221)||(16407848-16407923)
chr5 (304-349)||(42426685-42426730)
[»] chr3 (101 HSPs)
chr3 (1-445)||(8477557-8478003)
chr3 (1-444)||(40372256-40372700)
chr3 (1-444)||(7167437-7167882)
chr3 (1-382)||(9090823-9091205)
chr3 (1-444)||(28503319-28503768)
chr3 (1-382)||(8738585-8738967)
chr3 (1-444)||(28501152-28501601)
chr3 (1-398)||(2671111-2671490)
chr3 (1-436)||(1306140-1306595)
chr3 (162-444)||(27352081-27352363)
chr3 (144-436)||(23198229-23198521)
chr3 (162-444)||(54634710-54634991)
chr3 (3-436)||(33386146-33386569)
chr3 (162-444)||(6716085-6716366)
chr3 (144-436)||(23200428-23200720)
chr3 (169-444)||(18656752-18657029)
chr3 (144-444)||(25637013-25637313)
chr3 (162-432)||(800698-800969)
chr3 (259-444)||(22172662-22172847)
chr3 (3-436)||(27453152-27453572)
chr3 (162-444)||(3617034-3617316)
chr3 (162-444)||(4598824-4599107)
chr3 (162-444)||(4601045-4601328)
chr3 (162-432)||(10058039-10058310)
chr3 (162-432)||(10060261-10060532)
chr3 (162-432)||(10062483-10062754)
chr3 (162-432)||(10064705-10064976)
chr3 (243-436)||(26928089-26928282)
chr3 (162-446)||(10055803-10056088)
chr3 (162-432)||(10066927-10067198)
chr3 (1-382)||(32143513-32143884)
chr3 (162-444)||(10210978-10211261)
chr3 (162-382)||(45282628-45282847)
chr3 (162-382)||(6718331-6718550)
chr3 (162-436)||(7782449-7782703)
chr3 (300-436)||(37726154-37726290)
chr3 (233-444)||(10208778-10208990)
chr3 (169-436)||(2672427-2672695)
chr3 (169-436)||(2676583-2676851)
chr3 (300-436)||(37408045-37408180)
chr3 (169-336)||(24968428-24968596)
chr3 (3-182)||(27986182-27986350)
chr3 (169-437)||(32475795-32476064)
chr3 (45-160)||(22172982-22173096)
chr3 (3-382)||(27974477-27974846)
chr3 (169-437)||(32480653-32480922)
chr3 (169-437)||(8512551-8512820)
chr3 (1-140)||(26928359-26928495)
chr3 (393-444)||(8738542-8738593)
chr3 (393-444)||(9090780-9090831)
chr3 (3-182)||(21711414-21711582)
chr3 (169-336)||(8517431-8517599)
chr3 (300-382)||(27986001-27986083)
chr3 (3-140)||(39032315-39032448)
chr3 (368-439)||(36029640-36029711)
chr3 (14-140)||(40592542-40592665)
chr3 (14-140)||(47923664-47923787)
chr3 (3-140)||(8370249-8370383)
chr3 (3-136)||(16264541-16264671)
chr3 (3-104)||(36029285-36029383)
chr3 (300-432)||(27027186-27027318)
chr3 (390-439)||(30709264-30709313)
chr3 (14-140)||(1736064-1736187)
chr3 (390-437)||(21711771-21711818)
chr3 (385-436)||(27974442-27974493)
chr3 (390-444)||(6718288-6718342)
chr3 (300-437)||(27038521-27038658)
chr3 (390-436)||(32143873-32143919)
chr3 (300-432)||(40734087-40734218)
chr3 (390-444)||(45282585-45282639)
chr3 (390-439)||(16264899-16264948)
chr3 (3-142)||(6794473-6794609)
chr3 (300-439)||(35925970-35926108)
chr3 (394-437)||(1730916-1730959)
chr3 (393-444)||(16498637-16498688)
chr3 (390-437)||(39032025-39032072)
chr3 (3-104)||(35925670-35925768)
chr3 (300-432)||(40735018-40735149)
chr3 (19-142)||(26299196-26299316)
chr3 (393-437)||(40592252-40592296)
chr3 (390-438)||(48438785-48438833)
chr3 (14-140)||(24694926-24695049)
chr3 (300-362)||(5258591-5258653)
chr3 (385-431)||(27985971-27986017)
chr3 (7-140)||(37725871-37726001)
chr3 (14-142)||(1417249-1417374)
chr3 (14-142)||(3323449-3323574)
chr3 (14-142)||(3328115-3328240)
chr3 (390-438)||(24694654-24694703)
chr3 (300-349)||(29812736-29812785)
chr3 (393-438)||(47923326-47923371)
chr3 (300-352)||(6096264-6096316)
chr3 (300-352)||(8370044-8370096)
chr3 (300-352)||(16264828-16264880)
chr3 (300-352)||(46173186-46173238)
chr3 (300-335)||(3393293-3393328)
chr3 (169-224)||(22172902-22172957)
chr3 (35-104)||(4386773-4386840)
chr3 (370-446)||(24968630-24968706)
chr3 (300-349)||(44331893-44331942)
chr3 (300-349)||(49200115-49200164)
[»] chr4 (62 HSPs)
chr4 (1-446)||(24742133-24742579)
chr4 (160-436)||(13992593-13992870)
chr4 (1-436)||(28467986-28468443)
chr4 (45-444)||(51520641-51521050)
chr4 (1-382)||(29760833-29761196)
chr4 (45-444)||(9228686-9229095)
chr4 (45-445)||(9223898-9224308)
chr4 (169-444)||(56141511-56141788)
chr4 (162-432)||(31495618-31495889)
chr4 (170-444)||(5732971-5733247)
chr4 (162-445)||(7122266-7122549)
chr4 (162-447)||(8392979-8393263)
chr4 (169-444)||(3814330-3814605)
chr4 (162-444)||(8395191-8395472)
chr4 (162-444)||(5135649-5135932)
chr4 (162-444)||(5137875-5138158)
chr4 (169-444)||(18856033-18856309)
chr4 (45-405)||(18712294-18712667)
chr4 (3-436)||(31985136-31985538)
chr4 (169-437)||(45347324-45347593)
chr4 (260-432)||(7124501-7124673)
chr4 (369-444)||(18860446-18860521)
chr4 (300-437)||(5148157-5148294)
chr4 (3-439)||(16628351-16628777)
chr4 (3-140)||(16623064-16623198)
chr4 (169-350)||(45356892-45357074)
chr4 (390-444)||(29761185-29761239)
chr4 (300-437)||(6742896-6743033)
chr4 (390-439)||(3778118-3778167)
chr4 (384-437)||(8689044-8689097)
chr4 (390-439)||(38151916-38151965)
chr4 (385-437)||(5143807-5143859)
chr4 (14-140)||(3777752-3777875)
chr4 (14-140)||(5268971-5269094)
chr4 (6-140)||(5396442-5396573)
chr4 (14-140)||(10047584-10047707)
chr4 (4-182)||(38152174-38152342)
chr4 (3-140)||(6743186-6743320)
chr4 (3-140)||(36315001-36315135)
chr4 (3-140)||(36329210-36329344)
chr4 (390-439)||(16622772-16622821)
chr4 (14-142)||(25861802-25861927)
chr4 (393-437)||(5268699-5268743)
chr4 (390-438)||(10047935-10047983)
chr4 (3-104)||(5143452-5143550)
chr4 (300-352)||(54882492-54882544)
chr4 (3-137)||(8689270-8689401)
chr4 (390-437)||(54867748-54867795)
chr4 (300-362)||(2209162-2209224)
chr4 (300-362)||(26176070-26176132)
chr4 (390-438)||(9194167-9194216)
chr4 (67-140)||(54867432-54867505)
chr4 (300-352)||(3778028-3778080)
chr4 (14-100)||(5112440-5112523)
chr4 (300-335)||(5370522-5370557)
chr4 (390-433)||(36314715-36314758)
chr4 (390-433)||(36328924-36328967)
chr4 (300-358)||(12745863-12745921)
chr4 (304-362)||(46570194-46570252)
chr4 (300-350)||(52095807-52095857)
chr4 (396-433)||(5396176-5396213)
chr4 (300-349)||(5429353-5429402)
[»] chr7 (66 HSPs)
chr7 (28-444)||(2058189-2058604)
chr7 (1-401)||(1532947-1533347)
chr7 (1-436)||(21646198-21646634)
chr7 (1-436)||(18413830-18414266)
chr7 (1-436)||(18408954-18409390)
chr7 (1-444)||(21640000-21640423)
chr7 (168-432)||(24789439-24789703)
chr7 (1-444)||(20357028-20357451)
chr7 (45-444)||(4873312-4873721)
chr7 (208-436)||(39730942-39731172)
chr7 (248-433)||(43504524-43504709)
chr7 (160-445)||(18392496-18392781)
chr7 (186-444)||(12406598-12406857)
chr7 (47-444)||(24023819-24024226)
chr7 (163-453)||(25767263-25767549)
chr7 (243-436)||(48408407-48408600)
chr7 (162-444)||(6592639-6592921)
chr7 (144-444)||(6594838-6595137)
chr7 (3-436)||(2479528-2479951)
chr7 (45-444)||(12397095-12397492)
chr7 (233-447)||(20343497-20343711)
chr7 (45-444)||(31109070-31109485)
chr7 (162-444)||(1562305-1562587)
chr7 (233-444)||(32060677-32060888)
chr7 (160-346)||(18389060-18389246)
chr7 (259-436)||(21811747-21811924)
chr7 (300-436)||(47264122-47264258)
chr7 (371-444)||(1532884-1532958)
chr7 (300-437)||(21983722-21983859)
chr7 (329-436)||(44847628-44847735)
chr7 (169-437)||(16880384-16880653)
chr7 (169-437)||(16885239-16885508)
chr7 (300-436)||(21989387-21989522)
chr7 (169-437)||(24265684-24265953)
chr7 (45-115)||(12406515-12406585)
chr7 (169-336)||(24260929-24261097)
chr7 (14-146)||(46516070-46516199)
chr7 (3-140)||(47263858-47263992)
chr7 (14-140)||(20284292-20284415)
chr7 (14-140)||(23402784-23402907)
chr7 (390-439)||(79958-80007)
chr7 (370-446)||(24260819-24260895)
chr7 (3-137)||(21989100-21989231)
chr7 (300-362)||(4178434-4178496)
chr7 (14-142)||(2647466-2647591)
chr7 (14-102)||(4796477-4796562)
chr7 (304-387)||(2361608-2361691)
chr7 (14-140)||(33332221-33332344)
chr7 (18-140)||(44847896-44848015)
chr7 (300-362)||(6360576-6360638)
chr7 (14-142)||(2580593-2580717)
chr7 (300-349)||(4538997-4539046)
chr7 (300-349)||(47674389-47674438)
chr7 (300-349)||(47676582-47676631)
chr7 (14-62)||(35961020-35961067)
chr7 (390-437)||(46515809-46515857)
chr7 (153-221)||(48408605-48408672)
chr7 (14-104)||(9184981-9185068)
chr7 (3-62)||(21983478-21983536)
chr7 (300-362)||(4796225-4796287)
chr7 (14-142)||(9189775-9189901)
chr7 (390-444)||(18390508-18390562)
chr7 (300-350)||(23554711-23554761)
chr7 (144-198)||(39731201-39731253)
chr7 (300-362)||(48599942-48600004)
chr7 (390-431)||(49092241-49092282)
[»] chr8 (54 HSPs)
chr8 (1-447)||(1261411-1261859)
chr8 (1-444)||(4759534-4759979)
chr8 (1-446)||(36979570-36980016)
chr8 (1-444)||(30655839-30656282)
chr8 (1-445)||(18852626-18853071)
chr8 (1-444)||(18870021-18870465)
chr8 (1-444)||(33037287-33037712)
chr8 (1-448)||(6311491-6311939)
chr8 (1-432)||(26288082-26288504)
chr8 (1-432)||(26301339-26301761)
chr8 (1-432)||(26313333-26313755)
chr8 (45-446)||(7289425-7289827)
chr8 (28-382)||(10688661-10689016)
chr8 (162-444)||(3439088-3439368)
chr8 (169-445)||(10683738-10684015)
chr8 (162-436)||(2627327-2627602)
chr8 (45-444)||(25327664-25328054)
chr8 (162-444)||(42575626-42575909)
chr8 (169-445)||(39784324-39784601)
chr8 (322-432)||(31042921-31043031)
chr8 (144-382)||(25689604-25689841)
chr8 (233-444)||(15290143-15290355)
chr8 (233-444)||(15470512-15470724)
chr8 (300-432)||(7412807-7412939)
chr8 (169-437)||(35745702-35745971)
chr8 (1-101)||(31071035-31071134)
chr8 (3-140)||(7412532-7412666)
chr8 (390-444)||(10688618-10688672)
chr8 (3-140)||(4456220-4456354)
chr8 (390-444)||(25689561-25689615)
chr8 (390-437)||(5701959-5702006)
chr8 (300-408)||(1746665-1746773)
chr8 (14-140)||(4696379-4696502)
chr8 (14-140)||(5702251-5702374)
chr8 (3-137)||(19175528-19175659)
chr8 (14-140)||(23799347-23799470)
chr8 (390-436)||(4456578-4456624)
chr8 (14-100)||(9054231-9054314)
chr8 (300-382)||(19945786-19945869)
chr8 (300-362)||(4733485-4733547)
chr8 (45-103)||(25328122-25328180)
chr8 (163-225)||(31043128-31043189)
chr8 (300-362)||(31217916-31217978)
chr8 (300-349)||(15212459-15212508)
chr8 (14-142)||(19752163-19752288)
chr8 (300-352)||(22975986-22976038)
chr8 (390-437)||(23799099-23799146)
chr8 (300-335)||(34256951-34256986)
chr8 (300-382)||(43036062-43036145)
chr8 (300-362)||(4731318-4731380)
chr8 (390-436)||(19175233-19175279)
chr8 (14-104)||(26403034-26403123)
chr8 (300-349)||(30143015-30143064)
chr8 (300-349)||(42435655-42435704)
[»] scaffold0188 (2 HSPs)
scaffold0188 (1-436)||(17440-17857)
scaffold0188 (1-157)||(23795-23950)
[»] chr1 (55 HSPs)
chr1 (1-436)||(24202260-24202674)
chr1 (1-432)||(19365781-19366213)
chr1 (1-364)||(24786905-24787268)
chr1 (168-432)||(20622543-20622808)
chr1 (1-436)||(19360921-19361337)
chr1 (162-432)||(9986798-9987069)
chr1 (162-445)||(21053539-21053824)
chr1 (162-432)||(40281971-40282243)
chr1 (243-436)||(51764999-51765192)
chr1 (162-444)||(9036003-9036284)
chr1 (170-382)||(24793709-24793921)
chr1 (162-444)||(44203218-44203500)
chr1 (169-444)||(41390910-41391185)
chr1 (3-432)||(13604108-13604527)
chr1 (1-221)||(19358530-19358748)
chr1 (169-444)||(1054514-1054790)
chr1 (169-444)||(39445806-39446082)
chr1 (169-444)||(44023377-44023653)
chr1 (169-437)||(25439406-25439675)
chr1 (169-437)||(25444599-25444868)
chr1 (169-382)||(41398565-41398778)
chr1 (300-437)||(26644381-26644518)
chr1 (390-444)||(24793666-24793720)
chr1 (3-137)||(3281899-3282030)
chr1 (168-336)||(43988057-43988226)
chr1 (390-447)||(41398767-41398824)
chr1 (14-142)||(47098594-47098719)
chr1 (45-115)||(41398419-41398490)
chr1 (14-142)||(47102608-47102733)
chr1 (368-436)||(21536121-21536189)
chr1 (390-437)||(13598970-13599017)
chr1 (3-137)||(21536344-21536475)
chr1 (45-115)||(41390764-41390835)
chr1 (1-63)||(19379916-19379977)
chr1 (3-140)||(37069959-37070093)
chr1 (14-138)||(29652016-29652137)
chr1 (393-444)||(13659846-13659897)
chr1 (390-437)||(37070337-37070384)
chr1 (300-362)||(20762331-20762393)
chr1 (304-362)||(31658898-31658956)
chr1 (5-142)||(32889632-32889766)
chr1 (18-142)||(27104171-27104291)
chr1 (300-349)||(28220673-28220722)
chr1 (300-349)||(28223868-28223917)
chr1 (14-140)||(13598603-13598726)
chr1 (390-436)||(3282276-3282322)
chr1 (3-104)||(26644705-26644803)
chr1 (300-362)||(49918009-49918071)
chr1 (163-221)||(51765197-51765254)
chr1 (300-349)||(3156540-3156589)
chr1 (15-102)||(9022715-9022799)
chr1 (390-437)||(16124188-16124235)
chr1 (300-362)||(11348161-11348223)
chr1 (14-104)||(40816621-40816710)
chr1 (14-142)||(9476465-9476590)
[»] scaffold0491 (3 HSPs)
scaffold0491 (144-436)||(11453-11744)
scaffold0491 (241-436)||(9105-9299)
scaffold0491 (144-221)||(9027-9102)
[»] scaffold0135 (1 HSPs)
scaffold0135 (45-445)||(34553-34963)
[»] scaffold0286 (2 HSPs)
scaffold0286 (243-436)||(21948-22141)
scaffold0286 (162-221)||(22146-22204)
[»] scaffold1519 (1 HSPs)
scaffold1519 (142-408)||(519-787)
[»] scaffold0565 (1 HSPs)
scaffold0565 (162-444)||(2903-3185)
[»] scaffold0137 (1 HSPs)
scaffold0137 (144-444)||(5859-6159)
[»] scaffold0355 (2 HSPs)
scaffold0355 (169-444)||(3337-3613)
scaffold0355 (45-115)||(3679-3750)
[»] scaffold0674 (1 HSPs)
scaffold0674 (162-444)||(4028-4310)
[»] scaffold0006 (5 HSPs)
scaffold0006 (3-432)||(132765-133184)
scaffold0006 (390-437)||(6255-6302)
scaffold0006 (390-437)||(3063-3110)
scaffold0006 (393-444)||(149607-149658)
scaffold0006 (14-140)||(5888-6011)
[»] scaffold0464 (1 HSPs)
scaffold0464 (169-444)||(669-945)
[»] scaffold0140 (2 HSPs)
scaffold0140 (322-436)||(7920-8034)
scaffold0140 (3-140)||(8188-8322)
[»] scaffold0087 (3 HSPs)
scaffold0087 (3-436)||(43443-43866)
scaffold0087 (3-362)||(36388-36737)
scaffold0087 (385-437)||(36332-36384)
[»] scaffold0510 (1 HSPs)
scaffold0510 (300-432)||(1096-1228)
[»] scaffold1455 (1 HSPs)
scaffold1455 (369-444)||(1709-1784)
[»] scaffold0259 (1 HSPs)
scaffold0259 (169-437)||(1746-2015)
[»] scaffold0028 (1 HSPs)
scaffold0028 (169-437)||(148451-148720)
[»] scaffold0197 (2 HSPs)
scaffold0197 (169-437)||(18671-18940)
scaffold0197 (169-437)||(13791-14060)
[»] scaffold0665 (1 HSPs)
scaffold0665 (250-444)||(8099-8273)
[»] scaffold0098 (2 HSPs)
scaffold0098 (3-362)||(45390-45740)
scaffold0098 (392-436)||(45751-45795)
[»] scaffold0009 (1 HSPs)
scaffold0009 (169-445)||(176449-176726)
[»] scaffold0036 (2 HSPs)
scaffold0036 (3-137)||(85875-86006)
scaffold0036 (390-439)||(86156-86206)
[»] scaffold0066 (1 HSPs)
scaffold0066 (300-362)||(20861-20924)
[»] scaffold0002 (1 HSPs)
scaffold0002 (300-335)||(434218-434253)
[»] scaffold0176 (1 HSPs)
scaffold0176 (300-349)||(17710-17759)


Alignment Details
Target: chr6 (Bit Score: 337; Significance: 0; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 5674673 - 5674229
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  5674673 agaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaa 5674574  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    |||||||||||||||  |||||||||||| || ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  5674573 ccctttggttccctcctttgtaatccaagtttatctctctaagctcttccaagctctcctccaaatctgcacaagaacactttaaatactagccttcctc 5674474  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcaca 300  Q
    |||  |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| |    
T  5674473 tgatacaatcgtgtcacgatttccagatcgtgtcacgatttgcgtacgtcccaaggtatgaccagtccttatcacggatacttaacgagcaagtttcaaa 5674374  T
Q  301 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacga 400  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||  ||||| |||||||||||||||||| ||||||||    
T  5674373 atcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcatgtcacga 5674274  T
Q  401 tttctctgttcttccagaccacaaatttgaagccaa-tatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  5674273 tttctctgttcttccagaccacaaatttgaagccaactatcaaca 5674229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 22709200 - 22709636
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    |||||||| ||| |||||||||||||||||| || |||||| | |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||    
T  22709200 agaggaagtttttgatccttccaatggtgaaatc-tcactatccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaa 22709296  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctct--aagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttc 197  Q
    ||||   ||||||||  |||||||||||| || |||||||  || ||||||||| ||||  |||||| ||||||||||||||||| ||||||||| ||||    
T  22709297 ccctagagttccctcctttgtaatccaagtttttctctcttcaaactcttccaaactctactccaaaatctgcacaagaacactt-aaatactagtcttc 22709395  T
Q  198 ctctgaagcaatcgtgtcacgatttccagatcttttcacgatttgc--gtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtt 295  Q
    | || |   |||||||||||||||||||  || | ||||||||||   ||||||| ||||||| ||||||||||||||| ||| |||||| ||||| |||    
T  22709396 cactaataaaatcgtgtcacgatttccaagtcgtgtcacgatttgtatgtacgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtt 22709495  T
Q  296 tcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgt 395  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||  ||||||||||||| ||||||||||||||    
T  22709496 tgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcatggcatcacaaaatcgtgtcacgttgccaaattcgtgt 22709595  T
Q  396 cacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  22709596 catgatttctctgttcttccagaccacaaatttgaagccaa 22709636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 11857158 - 11857567
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  11857158 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 11857256  T
Q  145 tcttccaagctctttt--------cca---aatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttt 232  Q
    || | |||||||| ||        |||   ||   ||||||||||||  || ||||||| |||||||||||| ||||||| |||||||||| | ||| |     
T  11857257 tcattcaagctctcttaagttctcccagtaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaaatcgtg 11857356  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    |||||||||||    | |||||||| |||| |||||||||||  | ||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||    
T  11857357 tcacgatttgcaacggacccaaggt-tgacaagtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacg 11857455  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  ||||||||| |||||||| |  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11857456 atttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 11857555  T
Q  433 ccaatatcaaca 444  Q
    ||||||||||||    
T  11857556 ccaatatcaaca 11857567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 45 - 444
Target Start/End: Complemental strand, 22010598 - 22010189
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  22010598 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 22010500  T
Q  145 tcttccaagctcttttc----------caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttt 232  Q
    || | |||||||| ||           ||||   ||||||||||||  || ||||||| || ||||||||| ||||||| ||||||||||  ||||| |     
T  22010499 tcatacaagctctcttaagttcttcttcaaaaaagcacaagaacacaatatatactagtctccctctgaagaaatcgtgccacgatttccctagatcgtg 22010400  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    |||||||||||    | ||||||||| ||| |||||||||||  ||||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||    
T  22010399 tcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacg 22010301  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  ||||||||| | || ||| |  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22010300 atttggcgtcctgcaaactaacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 22010201  T
Q  433 ccaatatcaaca 444  Q
    ||||||||||||    
T  22010200 ccaatatcaaca 22010189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 48 - 444
Target Start/End: Complemental strand, 14742335 - 14741926
Alignment:
Q  48 gtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagctct 147  Q
    |||||||||||||||||| ||||||||| ||| ||||| ||||||||||| ||||| |||||||||||  |||| ||||||| ||||||||| ||||||     
T  14742335 gtgattacaatgtttttcccaacccaagagacactctcaacaaagacacttaacccattggttccctcctttgttatccaag-ttctctctcaaagctca 14742237  T
Q  148 tccaagctctttt-------------ccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttt 232  Q
    | |||||||| ||             |||||   ||||||||||||  || ||||||| ||||| |||||| ||||||| ||||||||||  ||||| |     
T  14742236 tacaagctctcttaaactctctttctccaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccttagatcgtg 14742137  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    ||||||| |||    | |||||||| |||| |||||||||||  ||||||||| ||||| |||||  |||||||||||||||| ||||||||||| ||||    
T  14742136 tcacgatctgcaacggacccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacg 14742038  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  ||||||||| ||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14742037 atttggcgtcctgcaaactagctcacgaccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 14741938  T
Q  433 ccaatatcaaca 444  Q
    ||||||||||||    
T  14741937 ccaatatcaaca 14741926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 144 - 432
Target Start/End: Original strand, 3073042 - 3073330
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--t 241  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||||||| ||| ||||   ||||||||||||||||||||||| | | ||||||  |    
T  3073042 ctcttccaa-ctctcttccaaatctgcacaagaacactt-aaatactagccctccactgataaaatcgtgtcacgatttccagatcgtgtaacgattagt 3073139  T
Q  242 gcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcac 341  Q
    || | | |||||||||||||||||||||||||| ||| |||||| ||||| ||||   |||||||||||||||||| |  ||||||||||||||||||||    
T  3073140 gcatccatcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacgatttggcac 3073239  T
Q  342 cctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||| | ||||||||||| || || |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  3073240 cctgtagaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagaccacaaatttgaag 3073330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 411970 - 411698
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||   |||||||||||||||||| |||  | ||||||||  ||| | |||||||||||||    
T  411970 caaatctgcacaagaacactt-aaatacatgccttccactgataaaatcgtgtcacgatttcctgattgtgtcacgattggtgcatccgtcccaaggtat 411872  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgttt-cacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 358  Q
    ||||||||||||||| ||| |||||| ||||| |||| |||||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||    
T  411871 gaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcac 411772  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    | ||||| ||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  411771 ggcaccacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaag 411698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 162 - 444
Target Start/End: Original strand, 16578820 - 16579101
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||| ||||  ||||| ||||||||||  | |||||||||||||||||| | ||| | ||||||| |||||||  ||||||  | |    
T  16578820 caaatctgcacaagaacaattta--tactacccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacg 16578917  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||| |||||||| ||||||||||| | ||||||||     
T  16578918 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacgg 16579017  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16579018 caccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 16616560 - 16616279
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||| ||||  ||||| ||||||||||  | |||||||||||||||||| | ||| | ||||||| |||||||  ||||||  | |    
T  16616560 caaatctgcacaagaacaattta--tactacccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacg 16616463  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||| |||||||| ||||||||||| | ||||||||     
T  16616462 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacgg 16616363  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16616362 caccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 243 - 436
Target Start/End: Original strand, 2171902 - 2172095
Alignment:
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 342  Q
    |||||||| ||||||| |||| |||||||||  ||| |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2171902 cgtacgtcacaaggtacgacctgtccttatcttggaaacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 2172001  T
Q  343 ctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  2172002 ctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaa 2172095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 16554735 - 16554454
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||| ||||  ||||||||||||||||  | |||||||||||||||||| | ||| | ||||||| |||||||  ||||||  | |    
T  16554735 caaatctgcacaagaacaattta--tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacg 16554638  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||| ||| |||| |||||||| || | ||||||||     
T  16554637 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacgg 16554538  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||  |||||||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16554537 caccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 16631291 - 16631010
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||| ||||  ||||||||||||||||  | |||||||||||||||||| | ||| | ||||||| |||||||  ||||||  | |    
T  16631291 caaatctgcacaagaacaattta--tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacg 16631194  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||| ||| |||| |||||||| || | ||||||||     
T  16631193 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacgg 16631094  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||  |||||||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16631093 caccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 277 - 444
Target Start/End: Complemental strand, 30125185 - 30125018
Alignment:
Q  277 gatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgt 376  Q
    ||||||||| ||||| |||||  ||||||||||||||||||||| |||||| |||||||||||  ||||||||| |||||||| ||||  ||||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgt 30125086  T
Q  377 cacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30125085 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30125018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 34166949 - 34166678
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | |||||||||||||||||||||||| | |    
T  34166949 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacg 34166851  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| ||||||||||||||||   |||||||| || | |||||    
T  34166850 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 34166751  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    | || |  ||||||| |||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  34166750 ggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 34166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 162 - 445
Target Start/End: Original strand, 33342405 - 33342689
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  33342405 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 33342503  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttccca-agatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   ||||||||||||||||||| | |||||| |||||||||   |||||||| || |||||||    
T  33342504 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcac 33342603  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
    | || |  ||||||| ||| |||| ||||| |||||||||||||||  |||||||||| ||||||||||||||| |||| |||||||    
T  33342604 ggcatc-cgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaatctcaacag 33342689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 233 - 432
Target Start/End: Complemental strand, 27647679 - 27647480
Alignment:
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    ||||||| |||||||  ||||||  | ||||||||  |||||||||||||||| ||||| ||||||| |||||||||||||||| ||  |||||| ||||    
T  27647679 tcacgatctgcgtaccacccaagaaacgaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacg 27647580  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||| ||||||||||| | |||||||| ||||  |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  27647579 attttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 27647480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 208 - 444
Target Start/End: Complemental strand, 25421034 - 25420797
Alignment:
Q  208 atcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtg 306  Q
    ||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  25421034 atcgtgtcacgattttcccaatcatgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtg 25420935  T
Q  307 tcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttct 405  Q
    ||||||||| || | |||||| |||||||||   |||||||| || |||||||| || |  |||||||||||||| | ||||| | |||||||||||||     
T  25420934 tcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacggtcccaaaattgtgtcacgatttcc 25420836  T
Q  406 ctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  25420835 ctgttcttccagaccacaaatttgaagacaatctcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 144 - 444
Target Start/End: Original strand, 6136246 - 6136547
Alignment:
Q  144 ctcttccaagctcttttc--caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatt 240  Q
    ||||||||| ||||| ||  |||||||||||||||| |||| ||||||||| |||||||||   ||||||||||||||||| ||  ||  | ||||||||    
T  6136246 ctcttccaacctcttctcttcaaatctgcacaagaa-actt-aaatactagtcttcctctgttccaatcgtgtcacgattttcccaattgtgtcacgatt 6136343  T
Q  241 tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggca 340  Q
    ||| | |||||||||| | |||||||||||||||||||||||||| ||||| |||||   |||||||||||||||||||  |||||| ||||||||        
T  6136344 tgcttccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcac 6136443  T
Q  341 ccctgcaaacc-agctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    |||||||| || |||||||| || |  ||||||||||| |||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||| |    
T  6136444 ccctgcaaccctagctcacggcatc-cgaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatct 6136542  T
Q  440 caaca 444  Q
    |||||    
T  6136543 caaca 6136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 6027116 - 6026834
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  6027116 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 6027018  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||| ||||||||||||||||||||| ||||| |||||   ||||||||||||||| || | |||||| |||||||||   |||||||| || ||||| ||    
T  6027017 accggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctctcg 6026918  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     ||||  ||||||||||||| |||||  | ||||||||||||||| || |||||||| ||||||||||||||| |||| ||||||    
T  6026917 -cacctcgaaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaagacaatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 233 - 444
Target Start/End: Original strand, 5266461 - 5266653
Alignment:
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||    
T  5266461 tcacgatttgcgtccgtttcaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacg 5266560  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  ||||||||| |||||||| ||||  ||||||||                   |||||||||||||||||||||||||||||||||||||||    
T  5266561 atttggcgtcctgcaaactagctcacggcacctcgaaatcgt-------------------gtcacgatttctctgttcttccagaccacaaatttgaag 5266641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 45 - 382
Target Start/End: Complemental strand, 14737478 - 14737128
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||| ||||||| ||||||||| ||||    
T  14737478 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaag-ttctctctcaaagc 14737380  T
Q  145 tcttccaagctctttt-------------ccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatc 229  Q
    || | |||||||| ||             |||||   ||||||||||||  || ||||||| ||||| |||||| ||||||| ||||||||||  |||||    
T  14737379 tcatacaagctctcttaagttctctttctccaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatc 14737280  T
Q  230 ttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtc 329  Q
     | ||||||| |||    | |||||||| |||| |||||||||||  ||||||||| ||||| |||||  |||||||||||||||| ||||||||||| |    
T  14737279 gtgtcacgatctgcaacggacccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgcc 14737181  T
Q  330 acgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
    ||||||||||  ||||||||| |||||||| |  | |||||||||||||||||    
T  14737180 acgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgat 14737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 34164727 - 34164456
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt--ccagatcttttcacgatttgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| || |||||| |||||||||   |||||||||||||||||  ||| ||| | ||||||||||||| |||||||||| |     
T  34164727 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgtcca-atcgtgtcacgatttgcgtccgtcccaaggaac 34164630  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctca 357  Q
    |||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| |||||| |||||||||   |||||||| || | ||||    
T  34164629 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactca 34164530  T
Q  358 cgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    || || |  ||||||| |||||||| ||| | ||||||||||||||| |||||||||||  ||||||||||||||    
T  34164529 cggcatc-cgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34164456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 169 - 444
Target Start/End: Original strand, 6438807 - 6439083
Alignment:
Q  169 gcacaagaacactttaaatactag-ccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccag 265  Q
    ||||||||||||  || ||||||| |||||| |||||| ||||||||||||||||||  ||||| | ||||||| |||    || || |||| |||||||    
T  6438807 gcacaagaacacaatatatactagtccttcc-ctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggttcccaggt-tgaccag 6438904  T
Q  266 tccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacacc 364  Q
    |||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||  ||| || ||||||  | |||||| ||||    
T  6438905 tccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctcacggcacc 6439004  T
Q  365 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     |  |||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  6439005 -tccaatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaatttcaaca 6439083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 233 - 432
Target Start/End: Complemental strand, 13151061 - 13150861
Alignment:
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcac 331  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| ||||||||||    
T  13151061 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcac 13150962  T
Q  332 gatttggcaccctgcaaacc-agctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttga 430  Q
    ||||||   |||||||| || | |||||| || |  ||||||| |||||||| ||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  13150961 gatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttga 13150863  T
Q  431 ag 432  Q
    ||    
T  13150862 ag 13150861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 144 - 337
Target Start/End: Complemental strand, 25421192 - 25420999
Alignment:
Q  144 ctcttccaagctcttt-tccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgattt 241  Q
    ||||||||| |||||| | ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | |||||||||    
T  25421192 ctcttccaacctctttcttcaaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcatgtcacgattt 25421094  T
Q  242 gcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttg 337  Q
    |||| |||||||||| | |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | ||| ||||||||||||    
T  25421093 gcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccca-atcatgtcacgatttg 25420999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 322 - 432
Target Start/End: Original strand, 6097863 - 6097973
Alignment:
Q  322 atcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacca 421  Q
    ||||||||||||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  6097863 atcgtgtcacgatttagcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaacca 6097962  T
Q  422 caaatttgaag 432  Q
    |||||||||||    
T  6097963 caaatttgaag 6097973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 162 - 382
Target Start/End: Complemental strand, 16652978 - 16652759
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||| ||||  ||||||||||||||||  | |||||||||||||||||| | ||| | ||||||| |||||||  ||||||  | |    
T  16652978 caaatctgcacaagaacaattta--tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacg 16652881  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||| || | |||||  ||||| || ||||||| ||| | ||||||||     
T  16652880 accagtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttccacgactttgcaccctacaacctagctcacgg 16652781  T
Q  361 caccatgaaatcgtgtcacgat 382  Q
    ||||  ||||||||||||||||    
T  16652780 caccccgaaatcgtgtcacgat 16652759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 186 - 382
Target Start/End: Original strand, 5266433 - 5266610
Alignment:
Q  186 atactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaa 285  Q
    ||||||| ||||||||||||||||||||||                   ||||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  5266433 atactagtcttcctctgaagcaatcgtgtc-------------------acgatttgcgtccgtttcaaggtatgaccagtccttatcaaggatacttaa 5266513  T
Q  286 tgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
    |||||| |||||  |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| ||||  ||||||||||||||||    
T  5266514 tgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 16839054 - 16839323
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||| ||||||| | | | |||||| ||||||||||||||||||  ||||| | ||||||| |||    |||||||||| ||||||||    
T  16839054 gcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggt-tgaccagt 16839152  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   ||||||| || |     
T  16839153 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatc- 16839251  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   |||||||||||| ||||||| ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  16839252 tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 16839323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 33330209 - 33329940
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  33330209 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 33330111  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   ||||||| || |     
T  33330110 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatc- 33330012  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   |||||||||||| ||||||| ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33330011 tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 300 - 432
Target Start/End: Original strand, 23896812 - 23896944
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    ||||||||||||||||| ||| |||||  ||||||||| |||||||||||||| ||||||| |  |  ||||||||||||||||||||| ||||||||||    
T  23896812 aatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacg 23896911  T
Q  400 atttctctgttcttccagaccacaaatttgaag 432  Q
    |||| ||||||||| || |||||||||||||||    
T  23896912 atttttctgttctttcaaaccacaaatttgaag 23896944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 322 - 432
Target Start/End: Complemental strand, 26253712 - 26253602
Alignment:
Q  322 atcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacca 421  Q
    ||||||||||||||||||||||||| ||| | ||||||  | ||  ||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  26253712 atcgtgtcacgatttggcaccctgctaactatctcacggtatcacaaaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagacca 26253613  T
Q  422 caaatttgaag 432  Q
    |||||||||||    
T  26253612 caaatttgaag 26253602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 6005730 - 6005999
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  6005730 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 6005828  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   ||||| | || |     
T  6005829 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcatggcatc- 6005927  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   |||||||||||| ||||||| ||| | ||||||| ||||||| ||||| ||||||||||||||||||||    
T  6005928 tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaat 6005999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 33335706 - 33335437
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||| |||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  33335706 gcacatgaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 33335608  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   ||||||| || |     
T  33335607 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatc- 33335509  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   |||||||||||| ||||||| ||| |  |||||| ||||||||||||| ||||||||||||||||||||    
T  33335508 tccgatcgtgtcacgattgccaaa-tcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaat 33335437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 169 - 350
Target Start/End: Complemental strand, 28155347 - 28155165
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| | ||| |||||| ||||||||||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  28155347 gcacaagaacacaatatatactagtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 28155249  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac 350  Q
    ||||||||  |||||||||  |||| |||||   ||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  28155248 ccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaac 28155165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 3 - 436
Target Start/End: Complemental strand, 5757383 - 5756960
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||   |||||||||||||||||    
T  5757383 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctaaatacaaagacactcaacc 5757287  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   ||| ||||  |||||||||||| ||||||||||       |||| |||||  |||||| ||||||||| ||||||| |  ||  || ||||  ||    
T  5757286 ctaaagttacctcctttgtaatccaagtttctctctct-------tcca-gctctcctccaaaatctgcacaaaaacactt-atttagcagtcttcagct 5757196  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||   ||||||| |||| |||||| ||| |  |||||||  | | |||| || |||||| |||||  |||||||  | | ||||||  |||| |||| |     
T  5757195 gataaaatcgtgccacgttttccaaatcgtgccacgattgatacatacgaccaaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaa 5757097  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    ||||||||||||||||| ||| |||||  ||||||||| |||||||||||||| |||||||||  |  |||| |||||||||||||| | |||||||||     
T  5757096 aatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgacattacaaaattgtgtcacgatgccacaatcgtgtcaca 5756997  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||| |||||  | |||| |||||| |||||||    
T  5756996 atttctctattcttttaaaccataaatttaaagccaa 5756960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 169 - 446
Target Start/End: Original strand, 5343788 - 5344066
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||| ||||||| |   | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| | || ||||||||    
T  5343788 gcacaagaacactttatatactagtccagccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaagt-tgaccagt 5343886  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac-gacacc 364  Q
    ||||||||  |||||||||  |||| |||||  ||||||||||||||||||||||||||||||||||||| ||   | | | ||   ||||||   | ||    
T  5343887 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagaagacttggctcacttcctcc 5343986  T
Q  365 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 446  Q
     ||  |||||||||||||| | || ||||| ||||||||||||||||| ||| ||||||||||||||||||||  |||||||    
T  5343987 ctg--atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaattccaacagt 5344066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 14737139 - 14737085
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737139 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14737085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 31979704 - 31979840
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||| ||||||||  |||||||||||||  ||  ||| ||||||||||||||||||    
T  31979704 aggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtgtttacaatg--tttctcaacccaaaagaacctcactacaaagacactcaacc 31979800  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaa 142  Q
    ||   ||| ||||  ||| | |||||| ||||||||||||    
T  31979801 ctaaagttacctcctttgcagtccaagtttctctctctaa 31979840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 5572148 - 5572012
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||| ||||||| ||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  | | |||||||||||| |||||    
T  5572148 aggaagcttttgatcattccaatagtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatccccactacaaagacacccaacc 5572052  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaa 142  Q
    ||   ||| |||| ||||||||||||| ||||||||||||    
T  5572051 ctaaagttacctccattgtaatccaagtttctctctctaa 5572012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 31086377 - 31086245
Alignment:
Q  5 gaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccct 104  Q
    |||||||| |||||||||||||||||| || |||| ||| |||||| |||||||||||  ||||||| ||| ||  ||| ||||||||||||||||||||    
T  31086377 gaagcttttgatccttccaatggtgaaatc-tcacaacccaaggtgtttacaatgttt--ctcaacctaagagatcctcactacaaagacactcaaccct 31086281  T
Q  105 ttggttccctcaattgtaatccaagattctctctct 140  Q
       ||| || |  |||||||||||| ||||||||||    
T  31086280 aaagttaccccctttgtaatccaagtttctctctct 31086245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 437
Target Start/End: Complemental strand, 5017112 - 5016976
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
    |||||||||||| |||| ||| |||||| |||||||  ||||||||||||||| ||||||  |     ||||||||| |||| ||   || |||||||||    
T  5017112 aatcgtgtcacgttttctcaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgcttg--gaaatcgtgacacgttgatgaaatcgtgtcac 5017015  T
Q  399 gatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  5017014 gatttttctgttcttccaaaccacaaatttgaagccaat 5016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 28155144 - 28155097
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28155144 tcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 28155097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 437
Target Start/End: Complemental strand, 31086089 - 31085953
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
    |||||||||||| ||| |||| |||||| |||||||  ||||||||||||||| ||||||  |  |  |||||| || |||| ||   || |||||||||    
T  31086089 aatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgc--ctggaaatcatgacacgctgatgaaatcgtgtcac 31085992  T
Q  399 gatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  31085991 gatttctctgttcttctaaaccacaaatttgaagccaat 31085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 31936778 - 31936903
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||  ||  ||| ||||||||||||||||||||   ||| ||    
T  31936778 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaatagatcctcactacaaagacactcaaccctaaagttacc 31936874  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  ||| |||||||| ||||||||||||    
T  31936875 tcctttgcaatccaagtttctctctctaa 31936903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 6097803 - 6097877
Alignment:
Q  241 tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgattt 315  Q
    |||||||||||| ||||| ||||||||||||||| ||| |||||| ||||| ||||   ||||||||||||||||    
T  6097803 tgcgtacgtccccaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 6097877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 486 - 540
Target Start/End: Complemental strand, 14021249 - 14021195
Alignment:
Q  486 attatacaattcagacgtgcaaaaggcaccttgttttacacgtctggattgtgta 540  Q
    |||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||    
T  14021249 attatacaatccagacatgcaaaagacaccttgttttacacatctggattgtgta 14021195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 16652770 - 16652716
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  16652770 tcgtgtcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 437
Target Start/End: Complemental strand, 10076809 - 10076672
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||| ||||| |||||||| ||||| ||| |||| ||||||||||||| |||||| |||||     |||||||| |||| ||   || || |||||||    
T  10076809 aatcgtatcacgttttcccaaaatcgtatcatgattgggcaccctgcaaaacagctctcgacattgcaaaatcgtgacacgctgatgaaatcatgtcacg 10076710  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||| ||||||||| || | ||||||||| ||||||||    
T  10076709 atttttctgttctttcaaaacacaaatttaaagccaat 10076672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 34151905 - 34151840
Alignment:
Q  367 gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    ||||||| |||||||| ||| | ||||||||||||||| |||||||||||  ||||||||||||||    
T  34151905 gaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 2171839 - 2171897
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatt 221  Q
    ||||||||||||||||||||| ||||||||||||||| ||||   |||||||||||||||    
T  2171839 caaatctgcacaagaacactt-aaatactagccttccactgataaaatcgtgtcacgatt 2171897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 5017390 - 5017303
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccct 104  Q
    |||||||||||||||||| || ||| |||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||    
T  5017390 gatccttccaatggtgaaatc-tcattacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccct 5017303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 18233038 - 18233096
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgttt 62  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||| |||||||||||    
T  18233038 aggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtgtttacaatgttt 18233096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 24714941 - 24714989
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccac-aaatttgaagccaat 437  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  24714941 tcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaat 24714989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 6097742 - 6097800
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatt 221  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||   |||||||||||||||    
T  6097742 caaatctgcacaagaacac-ttaaatactagtcttcccctgataaaatcgtgtcacgatt 6097800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 14521877 - 14521924
Alignment:
Q  15 atccttccaatggtgaactcctcactacctaaggtgattacaatgttt 62  Q
    ||||||||||||||||| | ||||||||| |||||| |||||||||||    
T  14521877 atccttccaatggtgaaattctcactacccaaggtgtttacaatgttt 14521924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 18234653 - 18234700
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||  ||||||||||||||||| ||||||||||| ||||||||    
T  18234653 tcgtgtcaacatttctctgttcttccaaaccacaaatttaaagccaat 18234700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 439
Target Start/End: Complemental strand, 21272514 - 21272467
Alignment:
Q  392 gtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||| |||||| |||| | ||||||||||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaagccaatat 21272467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 22963902 - 22963989
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccct 104  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||| ||||| ||   || ||||||||||||||||||||    
T  22963902 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaatccaagagatcttcactacaaagacactcaaccct 22963989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 23824491 - 23824404
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccct 104  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||| ||||| ||   || ||||||||||||||||||||    
T  23824491 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaatccaagagatcttcactacaaagacactcaaccct 23824404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 27647729 - 27647673
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgat 220  Q
    ||||||||||||||||||||||  ||||||| ||||||||   ||||||||||||||||    
T  27647729 caaatctgcacaagaacacttt--atactagtcttcctctattgcaatcgtgtcacgat 27647673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 3809370 - 3809432
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| || ||||| |||||||||||||| |||||||| | || |||||| |||||    
T  3809370 aatcgtgtcacgtttccccaaaatcgtgtcacgattgggcacccttcgaaacagctctcgaca 3809432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 22964177 - 22964239
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| |||||||| ||||| ||||||||   ||||||||||| |||||| |||||    
T  22964177 aatcgtgtcacgttttcccaaaatcgtatcacgattgaacaccctgcaaaacagctctcgaca 22964239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 23824216 - 23824154
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| |||||||| ||||| ||||||||   ||||||||||| |||||| |||||    
T  23824216 aatcgtgtcacgttttcccaaaatcgtatcacgattgaacaccctgcaaaacagctctcgaca 23824154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 324; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 9296305 - 9295862
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||| || |||||||||||||||||    
T  9296305 agaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaatagacactttctacaaagacactcaa 9296206  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    |||||||||||||||  |||||||||||| || ||||||||||||||||||||||||  ||||||   |||||||||||||||||||||||| |||||||    
T  9296205 ccctttggttccctcctttgtaatccaagtttttctctctaagctcttccaagctctcctccaaaaaagcacaagaacactttaaatactagtcttcctc 9296106  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcaca 300  Q
    |||||||||||||||||||||| |||||| | ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||  |    
T  9296105 tgaagcaatcgtgtcacgattttcagatcgtgtcacgatttgcgtccgacccaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctga 9296006  T
Q  301 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacga 400  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||| |||||||||||    
T  9296005 atcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacga 9295906  T
Q  401 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9295905 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 9295862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 11098831 - 11098387
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  || ||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  11098831 agaggaagctttagatccttccaactaatgtactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactca 11098732  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||  || || |||| ||||||    
T  11098731 accctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctcttctacaaatctgcacaagaacacaatatatgctagtcttcct 11098632  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||| ||||||| ||||||||||||||| | |||||||||||||||  |||||||| ||||||||||||||||  ||||||||| ||||| |||||      
T  11098631 ctgaagaaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtttgaccagtccttatcagtgatacttaacgagcaagtttcta 11098532  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| |||| |||||||||||||| |||||||| ||||||||||    
T  11098531 aatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcactatgccaaaatcgtgtcacg 11098432  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11098431 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 11098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 445
Target Start/End: Original strand, 14291681 - 14292126
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| || ||||||||||| ||||    
T  14291681 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactatctacaaagacgctca 14291780  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| |   ||||||||||||||||||  || ||||||| ||||||    
T  14291781 accctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctaaaatctgcacaagaacacaatatatactagtcttcct 14291880  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||| ||||||| ||||||||||||||| | |||||||||||||||  |||||||||||||||||||||||||  | ||||||| ||||| |||||      
T  14291881 ctgaagaaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcagtggtacttaacgagcaagtttctg 14291980  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| ||||  || ||||||||||||||||||| ||||||||||    
T  14291981 aatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgagatcgtgtcacgatgccaaaatcgtgtcacg 14292080  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14292081 atttctctgttcttccagaccacaaatttgaagccaatatcaacag 14292126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 22 - 436
Target Start/End: Original strand, 25409842 - 25410257
Alignment:
Q  22 caatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgt 121  Q
    |||||||||| || |||||||| |||||| |||||||||||||| ||||||||| ||  ||||||||||||||||||||||||   ||||||||   |||    
T  25409842 caatggtgaaatc-tcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagtgttccctcctctgt 25409940  T
Q  122 aatccaagattctctctctaagctcttccaagctctt-ttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgat 220  Q
    |||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||||| |||||  | |||||||||||   ||| ||||||||||    
T  25409941 aatccaagtttctctctctaagctcttccaagctctacttcaaaatctgcacaagaacactt-aaatatcatccttcctctgataaaattgtgtcacgat 25410039  T
Q  221 ttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttccc 318  Q
    |||||  || | |||||||| |  |||||||| ||||||| ||||| |||||||||||||||||||| ||||| |||| | |||||||||||||||||||    
T  25410040 ttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccattccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttccc 25410139  T
Q  319 aagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaga 418  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25410140 aagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaga 25410239  T
Q  419 ccacaaatttgaagccaa 436  Q
    ||||||||||||||||||    
T  25410240 ccacaaatttgaagccaa 25410257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 3491942 - 3492368
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||| ||||||||||||||||| | || |||||||| |||||| |||||||||||||  ||||||||| ||  ||| ||||||||||||||||    
T  3491942 agaggaagcttaagatccttccaatggtggaatc-tcactacccaaggtgtttacaatgttttttccaacccaagagatcctcactacaaagacactcaa 3492040  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    ||||    |||||||  |||||||||||| ||||||||||||||| | |         | | |||||||||||||||||||| ||||||||| ||||| |    
T  3492041 ccctagatttccctcctttgtaatccaagtttctctctctaagctttac---------tccaaaatctgcacaagaacactt-aaatactagtcttccac 3492130  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttca 298  Q
    |||   ||| |||||||||||||||  || | |||||||| |  |||||||| ||||||| |||| |||||||||  ||| |||||| ||||| ||||||    
T  3492131 tgataaaattgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttca 3492230  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||||||||||||||||||||||||||    
T  3492231 gaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcac 3492330  T
Q  399 gatttctctgttcttccagaccacaaatttgaagccaa 436  Q
     |||||||||||||| ||||||||||||||||||||||    
T  3492331 aatttctctgttctttcagaccacaaatttgaagccaa 3492368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 144 - 432
Target Start/End: Original strand, 4484622 - 4484910
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttg- 242  Q
    ||||||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||   ||||||||||||||||||||||| | |||||||| |     
T  4484622 ctcttccaa-ctctctttcaaatctgcacaagaacactt-aaatactagccttccactgataaaatcgtgtcacgatttccagatcgtgtcacgattggt 4484719  T
Q  243 -cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcac 341  Q
     |||||||||||||||| |||||||||||||||  || |||||| ||||| ||||   ||||||||||||||| |  |||||||||||||||||||||||    
T  4484720 acgtacgtcccaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcac 4484819  T
Q  342 cctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4484820 cctgcaaactagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 163 - 436
Target Start/End: Complemental strand, 32289431 - 32289157
Alignment:
Q  163 aaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatg 260  Q
    |||||||||||||||||||| ||||||||||| ||| ||||   |||||||||||||||||||| || | |||||||| |  |||||||||||||||| |    
T  32289431 aaatctgcacaagaacactt-aaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggagcgtacgtcccaaggtacg 32289333  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    |||||||||||||| ||| |||||| ||||| ||||   ||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||     
T  32289332 accagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaaccagctcacgg 32289233  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32289232 catcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 162 - 436
Target Start/End: Complemental strand, 30833205 - 30832930
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||   |||||||||||||||||||  || | |||||||| |  |||||||| |||||||     
T  30833205 caaatctgcacaagaacactt-aaatactagtcttccactgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtac 30833107  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    |||| |||||||||  ||| |||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30833106 gacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 30833007  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
     || || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30833006 gcatcacgaaatcgtgtcacgatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30832930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 6 - 436
Target Start/End: Original strand, 40739029 - 40739448
Alignment:
Q  6 aagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctt 105  Q
    ||||||| |||||||||||||||||| || ||| |||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||     
T  40739029 aagcttttgatccttccaatggtgaaatc-tcattacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacccta 40739125  T
Q  106 tggttccctcaattgtaatccaagattctctctctaagctct--tccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctga 203  Q
      ||||||||  |||||||||||| ||||||||  || ||||  |||||          ||| |||||||||||||||| |||||| || ||||  ||||    
T  40739126 gagttccctcctttgtaatccaagtttctctcttcaa-ctctactccaa----------aaaactgcacaagaacactt-aaatacaagtcttcaactga 40739213  T
Q  204 agcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaa 301  Q
       ||||||||||||||||||| ||| | ||||||||  | |||||||| ||||||| |||| |||||||||  | | |||||| ||||| |||| | ||    
T  40739214 taaaatcgtgtcacgatttccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaa 40739313  T
Q  302 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgat 401  Q
    | ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||  |  ||||||||||||||||||||||||||||||||||    
T  40739314 ttgtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgat 40739413  T
Q  402 ttctctgttcttccagaccacaaatttgaagccaa 436  Q
    || ||||||||||||||||||||||||||||||||    
T  40739414 ttgtctgttcttccagaccacaaatttgaagccaa 40739448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 6266558 - 6266287
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||   |||||||||||||||||||| || | ||||||||  ||||| |||||||||  |     
T  6266558 caaatctgcacaagaacactt-aaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggtgcgttcgtcccaagaaac 6266460  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    ||||| ||||||||| ||| |||||| ||| | ||||   ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  6266459 gaccattccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacg 6266360  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
     || || ||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||    
T  6266359 gcatcacgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaaatttgaag 6266287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 45 - 444
Target Start/End: Complemental strand, 39811890 - 39811477
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccc-tttggttccctcaattgtaatccaagattctctct-ctaa 142  Q
    ||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||||||||| ||||||||||||  |||  ||||||| |||||| | | ||    
T  39811890 aaggtgattacaatgtttttctcaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatccaag-ttctctgtacaaa 39811792  T
Q  143 gctcttccaagctcttt------------tccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agat 228  Q
    |||| | |||||||| |            | ||||   ||||||||||||  || ||||||| |||||||||||| ||||||| ||||||||||  ||||    
T  39811791 gctcatacaagctctctcttaagtcctacttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagat 39811692  T
Q  229 cttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgt 328  Q
    | | ||||||| |||    | ||||||| | ||| |||||||||||  |||||||||  |||| |||||  ||||||||||||||||||||||||||||     
T  39811691 cgtgtcacgatctgcaacggccccaaggca-gacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgc 39811593  T
Q  329 cacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaattt 428  Q
    |||||||||||  |||||||||  ||| |||    | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39811592 cacgatttggcgtcctgcaaacttgcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaattt 39811493  T
Q  429 gaagccaatatcaaca 444  Q
    ||||||||||||||||    
T  39811492 gaagccaatatcaaca 39811477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 162 - 444
Target Start/End: Original strand, 12647685 - 12647967
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  12647685 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 12647783  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| ||||    |||||||||||||||||||  |||||| |||||||||   |||||||| || ||||||||    
T  12647784 accagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacg 12647883  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     || |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  12647884 gcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 44310549 - 44310471
Alignment:
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44310549 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 44310471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 368 - 444
Target Start/End: Original strand, 32247276 - 32247352
Alignment:
Q  368 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32247276 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 32247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 3 - 382
Target Start/End: Complemental strand, 28259082 - 28258713
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| ||| || |||||||||||  | ||||||||| ||  ||| ||| ||||||||||||||    
T  28259082 aggaagcttttgatccttccaatggtgaaatc-tcactacccaagatgtttacaatgttt--cccaacccaagagatcctcactataaagacactcaacc 28258986  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctctt-ttccaaatctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   ||| ||||  |||||||||||| ||||||||||         ||||||||| ||| |||||| ||||||||||||| | |||  || ||||   |    
T  28258985 ctaaagttacctcctttgtaatccaagtttctctctctt--------caagctcttcttcaaaatctacacaagaacactt-atatagcagtcttcagtt 28258895  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||   ||||||| |||| |||||| ||| |  |||||||  |||||||| ||||||||| |||||  |||||||  | | ||||||  |||| |||| |     
T  28258894 gataaaatcgtgccacgttttccaaatcgtgccacgattgatgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaa 28258796  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
    ||||||||||||||||| ||| || ||| ||||||||| ||||||||||||||||||||| ||  |  |||||||||||||||    
T  28258795 aatcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 28258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 19344733 - 19345002
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||| ||| |||    ||||| |||| ||||||||    
T  19344733 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcatgatctgcaacggtccccaggt-tgaccagt 19344831  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| || ||||| ||  || ||||||   ||||||| || |     
T  19344832 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttggctcacggcatc- 19344930  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   ||||| |||||| ||||||| ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  19344931 tccgatcgtatcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 19345002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 19349591 - 19349860
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||  |||| ||||||||    
T  19349591 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtcctcaggt-tgaccagt 19349689  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  | || |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   ||||||| || |     
T  19349690 ccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatc- 19349788  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   |||||||||||| ||||||||| | | ||||||| ||||||||||||| |||||||||||||| |||||    
T  19349789 tccgatcgtgtcacgattgccaaatt-gcgacacgattcctctgttcttccaaaccacaaatttgaaaccaat 19349860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 36757667 - 36757536
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||| ||||||||  |||| ||||||||| ||  ||| ||||||||||||||||||    
T  36757667 aggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaacc 36757571  T
Q  103 ctttggttccctcaattgtaatccaagattctctc 137  Q
    ||   ||| ||||  ||||||| |||| |||||||    
T  36757570 ctaaagttacctcctttgtaattcaagtttctctc 36757536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 8389678 - 8389629
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8389678 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 8389629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 33528518 - 33528395
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| || ||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  33528518 gatccttccaatggtgaaatc-tcactacccaatgtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacc 33528422  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  33528421 tcctttgtaatccaagtttctctctct 33528395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 10706780 - 10706731
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||    
T  10706780 tcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaatat 10706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 14698903 - 14698778
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||| ||||| || |||||||| |||||| |||||||||||  | |||||| || ||  ||| ||||||||||||||||||||   ||| ||    
T  14698903 gatccttccaatagtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccgagagatcctcactacaaagacactcaaccctaaagttacc 14698807  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||||||||||| ||||||||||||    
T  14698806 tcctttgtaatccaagtttctctctctaa 14698778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 33118338 - 33118463
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||| ||| || |||||||| |||||| ||||||||||   | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  33118338 gatccttccaatggcgaaatc-tcactacccaaggtgtttacaatgttc--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacc 33118434  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||||||||||| ||||||||||||    
T  33118435 tcctttgtaatccaagtttctctctctaa 33118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 33528150 - 33528105
Alignment:
Q  392 gtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  33528150 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 33528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 20522794 - 20522838
Alignment:
Q  393 tgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 21630148 - 21630268
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| ||||||||  |||| ||||||||| ||  ||| ||||||||||||||||| ||   ||| ||    
T  21630148 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaacactaaagttacc 21630244  T
Q  114 tcaattgtaatccaagattctctc 137  Q
    ||  |||||||||||| |||||||    
T  21630245 tcctttgtaatccaagtttctctc 21630268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 21630514 - 21630562
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 438  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  21630514 tcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaata 21630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 34389054 - 34389174
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| |||||||||||| |||||||   ||| ||    
T  34389054 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacacacaaccctaaagttacc 34389150  T
Q  114 tcaattgtaatccaagattctctc 137  Q
    ||  |||||||||||| |||||||    
T  34389151 tcctttgtaatccaagtttctctc 34389174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 36757477 - 36757425
Alignment:
Q  385 caaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 36757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 39483446 - 39483494
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 438  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  39483446 tcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaata 39483494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 23078376 - 23078245
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| ||||||||||||| |||| | ||||||||| |||||| ||||||||  |||| ||||||||| || ||||   ||||||||||||||||    
T  23078376 aggaagcttttgatccttccaatgatgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagattctcatcacaaagacactcaacc 23078280  T
Q  103 ctttggttccctcaattgtaatccaagattctctc 137  Q
    |    ||| ||||  |||||||||||| |||||||    
T  23078279 caaaagttacctcctttgtaatccaagtttctctc 23078245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 385 - 436
Target Start/End: Complemental strand, 28258729 - 28258678
Alignment:
Q  385 caaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaa 28258678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 10445361 - 10445236
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | |||||| || ||  ||| ||||||||||| ||||||||   ||| ||    
T  10445361 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccgagagaacctcactacaaagacattcaaccctaaagttacc 10445265  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||||||| ||| ||||||||||||    
T  10445264 tcctttgtaatctaagtttctctctctaa 10445236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 23077999 - 23077950
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  23077999 tcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaatat 23077950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 13569532 - 13569655
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||| | |||||| ||| |||||||  | ||||||||| ||  ||| ||||||||||||| ||||||   |||  |    
T  13569532 gatccttccaatggtgaaatc-tcactatccaaggtgtttataatgttt--cccaacccaagagatcctcactacaaagacacttaaccctaaagttatc 13569628  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||| |||||||||||| ||||||||||    
T  13569629 tcatttgtaatccaagtttctctctct 13569655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 2837290 - 2837339
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||||||    
T  2837290 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 2837339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 410
Target Start/End: Complemental strand, 29867601 - 29867491
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgac---accatgaaatcgtgtcacg-atgccaaattcgtgt 395  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||| ||| || ||| ||||   ||||  |||||||||||||  ||||||| ||||||    
T  29867601 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg-aaaacaactctcgacattacca--aaatcgtgtcacgcttgccaaa-tcgtgt 29867506  T
Q  396 cacgatttctctgtt 410  Q
    |||||||||||||||    
T  29867505 cacgatttctctgtt 29867491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 315
Target Start/End: Original strand, 32247097 - 32247244
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| | ||| |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  32247097 gcacaagaacacaatatatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 32247195  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgattt 315  Q
    | ||||||  ||||||||| ||||| |||||  ||||||| ||||||||    
T  32247196 ctttatcagtgatacttaacgagcaagtttctgaatcgtgccacgattt 32247244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 33528241 - 33528189
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 352  Q
    |||||||||||| |||||||| |||||| |||||||  |||||||||||||||    
T  33528241 aatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaacca 33528189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 382
Target Start/End: Complemental strand, 45099476 - 45099393
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacacca-tgaaatcgtgtcacgat 382  Q
    ||||||||||| ||||||||| || ||||||||||| | ||||||  |||||||||| |||||  |  ||||||||||||||||    
T  45099476 aatcgtgtcacaatttcccaaaattgtgtcacgattggacaccctaaaaaccagctctcgacaataccgaaatcgtgtcacgat 45099393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 13569902 - 13569948
Alignment:
Q  393 tgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||| ||||| ||||||||| || ||||||||||||||||||||||    
T  13569902 tgtcatgatttttctgttctttcaaaccacaaatttgaagccaatat 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 207 - 350
Target Start/End: Original strand, 34389236 - 34389380
Alignment:
Q  207 aatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcg 304  Q
    |||||||||||| |||||| ||| |  |||||||  |||||||| ||||||||| |||||  |||||||  | | || ||   |||| |||| | |||||    
T  34389236 aatcgtgtcacgttttccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacgtacccagcaagtttgaaaatcg 34389334  T
Q  305 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac 350  Q
    ||||||| |||||||| |||||||||||||| | ||||||| ||||    
T  34389335 tgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaac 34389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 2837923 - 2837834
Alignment:
Q  15 atccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaaccc--aagtgactctctctacaaagacactcaaccct 104  Q
    ||||||||||||||||| | ||||||| | |||||| |||||||||||  | ||||||  ||| ||  ||| ||||||||||||||||||||    
T  2837923 atccttccaatggtgaaattctcactatccaaggtgtttacaatgttt--cccaaccctcaagagaacctcactacaaagacactcaaccct 2837834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 35397712 - 35397760
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttt 63  Q
    |||||||||||||||||| || |||||||| ||||| |||||||||||||    
T  35397712 gatccttccaatggtgaaatc-tcactacccaaggtaattacaatgtttt 35397760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 313; Significance: 1e-176; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 444
Target Start/End: Original strand, 24136040 - 24136484
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| || |||||||||||||||||    
T  24136040 agaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactttctacaaagacactcaa 24136139  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    |||||||||||||||  |||||||||||| |||||||||| ||||||||||||||||  ||||||  ||||||||||||||||| |||||||| ||||||    
T  24136140 ccctttggttccctcctttgtaatccaagtttctctctcttagctcttccaagctctactccaaaaatgcacaagaacactttatatactagctttcctc 24136239  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcaca 300  Q
    |||  |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| | |    
T  24136240 tgatacaatcgtgccacgatttccagatcgtgtcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaa 24136339  T
Q  301 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacga 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || || ||||| ||||||||||||||||||||||||||||    
T  24136340 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaattgtgtcacgatgccaaattcgtgtcacga 24136439  T
Q  401 tttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 444  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||    
T  24136440 tttctgtgttcttccagaccacaaatttgaaaccaaatatcaaca 24136484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 27449998 - 27450409
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  27449998 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 27450096  T
Q  145 tcttccaagctct-------------tttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatct 230  Q
    || | ||||||||             |||  |||   ||||||||||||  || |||||||||||||||||||||||||||| |||||||||| | |||     
T  27450097 tcattcaagctctcttaagttttttttttgtaaaaaagcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttcccaaatcg 27450196  T
Q  231 tttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtca 330  Q
    | |||||||||||||  | ||||||||| ||||||||||||||| |||||||||| ||||| |||||  |||||||||||||||||||||||||||| ||    
T  27450197 tgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcca 27450295  T
Q  331 cgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttga 430  Q
    |||||||||  ||||||||| |||||||| | || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27450296 cgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 27450395  T
Q  431 agccaatatcaaca 444  Q
    ||||||||||||||    
T  27450396 agccaatatcaaca 27450409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 27445154 - 27445566
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  27445154 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 27445252  T
Q  145 tcttccaagctct--------------tttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatc 229  Q
    || | ||||||||              |||  |||   ||||||||||||  || |||||||||||||||||||||||||||| |||||||||| | |||    
T  27445253 tcattcaagctctcttaagtttttttttttgtaaaaaagcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttcccaaatc 27445352  T
Q  230 ttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtc 329  Q
     | |||||||||||||  | ||||||||| ||||||||||||||| |||||||||| ||||| |||||  |||||||||||||||||||||||||||| |    
T  27445353 gtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcc 27445451  T
Q  330 acgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttg 429  Q
    ||||||||||  ||||||||| |||||||| | || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  27445452 acgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttg 27445551  T
Q  430 aagccaatatcaaca 444  Q
    |||||||||||||||    
T  27445552 aagccaatatcaaca 27445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 35387854 - 35388169
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    |||||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||||||  ||||||||| ||| ||||||||||||||||||||    
T  35387854 agaggaagttttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgttttttccaacccaagagaccctctctacaaagacactcaa 35387952  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttcc-aaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||   ||||||||  |||||||||||| || |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||    
T  35387953 ccctagagttccctcctttgtaatccaagtttttctctctaagctcttccaagctctcttccaaaatctgcacaagaacac-ttaaatactagccttcct 35388051  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
    ||||   ||||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||     
T  35388052 ctgataaaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtacgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttg 35388151  T
Q  298 acaatcgtgtcacgattt 315  Q
    | ||||||||||| ||||    
T  35388152 aaaatcgtgtcacaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 1 - 444
Target Start/End: Original strand, 31180406 - 31180830
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||    
T  31180406 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactca 31180505  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||| ||||||| |||||||||||||||||||||||| |   | ||||   ||||||||||||  || ||||||| ||||||    
T  31180506 accctttggttccctcctttgttatccaag-ttctctctctaagctcttccaagccccgcttcaaaaa-gcacaagaacacaatatatactagtcttcct 31180603  T
Q  200 ctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
    |||||||||||||| ||||||||||  ||||| | |||||||||||||  | |||||||| ||||||||||||||||  ||||||||| ||| | || ||    
T  31180604 ctgaagcaatcgtgccacgatttcccaagatcatgtcacgatttgcgtctgacccaaggt-tgaccagtccttatcagtgatacttaacgagaaagtctc 31180702  T
Q  298 acaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtca 397  Q
      |||||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||| |||||||||                   ||||    
T  31180703 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacaccttgaaatcgt-------------------gtca 31180783  T
Q  398 cgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31180784 cgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 31180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 43598908 - 43599318
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  43598908 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 43599006  T
Q  145 tcttccaagctctttt--------cca---aatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttt 232  Q
    || | |||||||| ||        |||   ||    |||||||||||  || ||||||||||||||||||||||||||||||||||||||| | ||| |     
T  43599007 tcattcaagctctcttaagttctcccagtaaaaaaacacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtg 43599106  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    |||||||||||||  | ||||||||| ||||||||||||||| |||||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||    
T  43599107 tcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacg 43599205  T
Q  333 atttggcaccctgcaaaccagctcacgacaccat-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaa 431  Q
    |||||||  ||||||||| |||||||| | || | ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43599206 atttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 43599305  T
Q  432 gccaatatcaaca 444  Q
    |||||||||||||    
T  43599306 gccaatatcaaca 43599318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 43604400 - 43604810
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  43604400 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 43604498  T
Q  145 tcttccaagctctttt--------cca---aatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttt 232  Q
    || | |||||||| ||        |||   ||    |||||||||||  || ||||||||||||||||||||||||||||||||||||||| | ||| |     
T  43604499 tcattcaagctctcttaagttctcccagtaaaaaaacacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtg 43604598  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    |||||||||||||  | ||||||||| ||||||||||||||| |||||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||    
T  43604599 tcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacg 43604697  T
Q  333 atttggcaccctgcaaaccagctcacgacaccat-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaa 431  Q
    |||||||  ||||||||| |||||||| | || | ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43604698 atttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 43604797  T
Q  432 gccaatatcaaca 444  Q
    |||||||||||||    
T  43604798 gccaatatcaaca 43604810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 43609892 - 43610302
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  43609892 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 43609990  T
Q  145 tcttccaagctctttt--------cca---aatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttt 232  Q
    || | |||||||| ||        |||   ||    |||||||||||  || ||||||||||||||||||||||||||||||||||||||| | ||| |     
T  43609991 tcattcaagctctcttaagttctcccagtaaaaaaacacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtg 43610090  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    |||||||||||||  | ||||||||| ||||||||||||||| |||||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||    
T  43610091 tcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacg 43610189  T
Q  333 atttggcaccctgcaaaccagctcacgacaccat-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaa 431  Q
    |||||||  ||||||||| |||||||| | || | ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43610190 atttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 43610289  T
Q  432 gccaatatcaaca 444  Q
    |||||||||||||    
T  43610290 gccaatatcaaca 43610302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 1 - 359
Target Start/End: Original strand, 38219590 - 38219944
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||||||||| ||||||||| ||  ||| ||||||||||||||||    
T  38219590 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaa 38219688  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctctt-ttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||   ||||||||  |||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||      |||||||||||||    
T  38219689 ccctagagttccctcctttgtaatccaagtttctctctctaagctcttcaaagctcttcttcaaaatctgcacaagaacac------tactagccttcct 38219782  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
    ||||   ||| ||||||||||||||| ||| | |||||||| |  |||||||| ||||||| ||||||||||||||| ||| ||||||  |||| ||||     
T  38219783 ctgataaaattgtgtcacgatttccaaatcgtgtcacgattggaacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacaagcaagtttg 38219882  T
Q  298 acaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38219883 aaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaaccagctcacg 38219944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 144 - 436
Target Start/End: Complemental strand, 26177767 - 26177475
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--t 241  Q
    ||||||||| |||| ||| |||||||| ||||||||||| ||||||||||| ||| ||||   |||||||||||||||||||| || | ||||||||  |    
T  26177767 ctcttccaa-ctctcttcaaaatctgcgcaagaacactt-aaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggt 26177670  T
Q  242 gcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcac 341  Q
    |||| |||||||||||| ||||||||||||||| ||| |||||| ||||| ||||   |||||||||||||||||||| |||||||||||||||||||||    
T  26177669 gcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcac 26177570  T
Q  342 cctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26177569 cctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 26177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 162 - 432
Target Start/End: Original strand, 18441949 - 18442220
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||   |||||||||||||||||||| || | ||||||||  ||||| |||||||||  |     
T  18441949 caaatctgcacaagaacactt-aaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggtgcgttcgtcccaagaaac 18442047  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    ||||||||||||||| ||| |||||| ||||| ||||   ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18442048 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacg 18442147  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
     || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18442148 gcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 18442220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 144 - 436
Target Start/End: Complemental strand, 26170658 - 26170366
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--t 241  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||||||| ||| ||||   |||||||||||||| ||||| || | ||||||||  |    
T  26170658 ctcttccaa-ctctcttcaaaatctgcacaagaacactt-aaatactagccctccactgataaaatcgtgtcacgatatccaggtcgtgtcacgattggt 26170561  T
Q  242 gcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcac 341  Q
    |||| |||||||||||| ||||||||||||||| ||| |||||| ||||| ||||   |||  ||||||||||||||| |||||||||||||||||||||    
T  26170560 gcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcac 26170461  T
Q  342 cctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||||| || ||  ||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  26170460 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaagccaa 26170366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 162 - 432
Target Start/End: Original strand, 9789525 - 9789796
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||   |||||||||||||||| ||| || | |||||| |  ||||| |||| ||||  |     
T  9789525 caaatctgcacaagaacactt-aaatactagccctccactgataaaatcgtgtcacgattttcaggtcgtgtcacgaatggtgcgttcgtcgcaagaaac 9789623  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    ||||||||||||||| ||| |||||| ||||| ||||   ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  9789624 gaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacg 9789723  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
     || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9789724 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9789796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 169 - 444
Target Start/End: Complemental strand, 1456914 - 1456638
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| |||||||| ||| ||||||| ||||||||||  ||| | | ||||||||||| |  | ||||||||| ||| |||    
T  1456914 gcacaagaacacaatatatactagtcttcctctaaagaaatcgtgccacgatttcccaagaccgtgtcacgatttgcatctgacccaaggta-gacaagt 1456816  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccat 366  Q
    |||||||| ||||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||||||  |||| |||| |||||||| | || |    
T  1456815 ccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaactagctcacggcccctt 1456716  T
Q  367 gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1456715 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 1456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 247 - 432
Target Start/End: Complemental strand, 29720164 - 29719978
Alignment:
Q  247 cgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgttt-cacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctg 345  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||| |||| |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  29720164 cgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctg 29720065  T
Q  346 caaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    || || |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29720064 cagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29719978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 40379960 - 40379678
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  40379960 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 40379862  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||||||||| || ||||||||||| || ||||||||    
T  40379861 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacg 40379762  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     |||| |  |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  40379761 gcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 40379678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 242 - 436
Target Start/End: Complemental strand, 16407844 - 16407650
Alignment:
Q  242 gcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcac 341  Q
    ||||||||||||||||| |||| |||||||||| ||| |||||| ||||| ||||   ||||||||||||||| | ||||||||||||||||||||||||    
T  16407844 gcgtacgtcccaaggtacgaccggtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcac 16407745  T
Q  342 cctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||||| || ||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16407744 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 16407650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 16546498 - 16546216
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  16546498 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 16546400  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||||||||| || ||||||||||| || ||||||||    
T  16546399 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacg 16546300  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     |||| |  |||||||||||||| ||||| ||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16546299 gcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 259 - 447
Target Start/End: Original strand, 30631763 - 30631951
Alignment:
Q  259 tgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 358  Q
    ||||||||||||||||  ||||||||| ||||| |||||  ||||||||||||||||||||| ||||||||||||||||||  |||||||||  ||||||    
T  30631763 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcac 30631862  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagtt 447  Q
    | ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30631863 ggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagtt 30631951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 40382171 - 40381889
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  40382171 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 40382073  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||||||||| || ||||||||||| || ||||||||    
T  40382072 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacg 40381973  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     |||| |  |||||||||||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  40381972 gcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 43592463 - 43592854
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  43592463 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 43592561  T
Q  145 tcttccaagctctttt--------cca---aatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttt 232  Q
    || | |||||||| ||        |||   ||   ||||||||||||  || ||||||||||||||| ||||||||||||||||||||||| | ||| |     
T  43592562 tcattcaagctctcttaagttctcccagtaaaaaagcacaagaacacaatatatactagccttcctccgaagcaatcgtgtcacgatttcccaaatcgtg 43592661  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    |||||||||||||  | ||||||||| ||||||||||||||| |||||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||    
T  43592662 tcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacg 43592760  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  ||||||||| |||||||| | || |               ||   || |||||||||||||||||||||||||||||||||||||||||||    
T  43592761 atttggcgtcctgcaaactagctcacggccccct---------------tg---aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43592842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 15044869 - 15045279
Alignment:
Q  45 aaggtgattacaatgtttttctcaa-cccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctct-ctaa 142  Q
    ||||||||||||||||||||| ||| |||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| |||||||| | ||    
T  15044869 aaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctacaaa 15044967  T
Q  143 gctcttccaagctcttttc----------caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatct 230  Q
    |||| | |||||||| ||           ||||   ||||||||||||  || ||||||| ||||| |||||| ||||||| ||||||||||  |||||     
T  15044968 gctcatacaagctctcttaagttcttcttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcg 15045067  T
Q  231 tttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtca 330  Q
    | ||||||| |||    | ||| |||| ||||||||||||||||  ||||||||||||||| |||||  |||||||||||||||||||||||||||| ||    
T  15045068 tgtcacgatctgcaacggaccccaggt-tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcca 15045166  T
Q  331 cgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttga 430  Q
    |||||||||  |||||||||  ||||||| || | | ||||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||    
T  15045167 cgatttggcgtcctgcaaactggctcacggcatc-tcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttga 15045265  T
Q  431 agccaatatcaaca 444  Q
    ||||||||||||||    
T  15045266 agccaatatcaaca 15045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 242 - 436
Target Start/End: Complemental strand, 16409280 - 16409086
Alignment:
Q  242 gcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcac 341  Q
    ||||||||||||| ||| ||||||||||||||| ||| |||||| ||||| ||||   ||||||||||||||| | |||||||||||||| |||||||||    
T  16409280 gcgtacgtcccaatgtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggcac 16409181  T
Q  342 cctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    | ||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16409180 cttgcaaaccagctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 16409086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 168 - 432
Target Start/End: Original strand, 29751467 - 29751711
Alignment:
Q  168 tgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| ||| | |||||||||||||||  |||||||||||||||||    
T  29751467 tgcacaagaacactttatatactagccttcctctaaagcaatcgtgtcacgattttccaaatcgtgtcacgatttgcgtacaacccaaggtatgaccagt 29751566  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccat 366  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||                     ||||||||||||||| | |||||||| |||||     
T  29751567 ccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacga---------------------tttggcaccctgcaacctagctcacggcaccac 29751645  T
Q  367 gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||||||  |||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  29751646 gaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagaccacaaatttgaag 29751711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 162 - 445
Target Start/End: Complemental strand, 10593125 - 10592843
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| | ||||||| |||||||||  | |||||||||||||||||| | ||| | ||||||| |||||||  || |||  | |    
T  10593125 caaatctgcacaagaacactt-acatactagtcttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccaccgaagaaacg 10593027  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    |||||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| || | |||||| |||||||| ||||||||||| | | ||||||     
T  10593026 accagtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctatctcacgg 10592927  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
    ||||  ||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  10592926 cacccggaa-tcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 10592843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 16544276 - 16543994
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  16544276 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 16544178  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||||||||| || |||||||| || || |||||||     
T  16544177 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagctcaca 16544078  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     |||| |  |||||||||||||| ||||| ||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16544077 gcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 260 - 444
Target Start/End: Original strand, 22536668 - 22536852
Alignment:
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    |||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||  || ||| |||||||| ||||||||||| | ||||||||    
T  22536668 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaacctagctcacg 22536767  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     ||||  |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  22536768 gcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 22536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 25077988 - 25077718
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  25077988 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 25077890  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||||||||||  |||||| |||||||||   |||| ||| || ||||||||    
T  25077889 accagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcacg 25077790  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
     |||| |  ||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  25077789 gcacc-tccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25077718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 25135957 - 25135687
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  25135957 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 25135859  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||||||||||  |||||| |||||||||   |||| ||| || ||||||||    
T  25135858 accagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcacg 25135759  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
     |||| |  ||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  25135758 gcacc-tccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 266 - 444
Target Start/End: Complemental strand, 29402728 - 29402550
Alignment:
Q  266 tccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacacca 365  Q
    |||||||||  ||||||||| ||||| |||||  |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||| | |  |     
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccact 29402629  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29402628 tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 29402550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 266 - 432
Target Start/End: Complemental strand, 29722332 - 29722165
Alignment:
Q  266 tccttatcaaggatacttaatgagcatgttt-cacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacacc 364  Q
    ||||||||| ||| |||||| ||||| |||| |||||||||||||||||||||||  ||||||||||||||||||||| |||| || |||||||  ||||    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcacc 29722233  T
Q  365 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29722232 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29722165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 3 - 436
Target Start/End: Complemental strand, 9353237 - 9352816
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||| ||||    
T  9353237 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacacttaacc 9353141  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctg 202  Q
    ||   ||| ||||  |||||||||||| ||||||||||    || |||   |||    | |||||||||||||||||||| |||||| || ||||  |||    
T  9353140 ctaaagttacctcctttgtaatccaagtttctctctct----tcatcct--ctcc---caaaatctgcacaagaacactt-aaataccagtcttcagctg 9353051  T
Q  203 aagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcaca 300  Q
    |   ||||||| |||| |||||| ||| |  |||||||  |  ||||| ||||||||| |||||  |||||||  | | ||||||  |||| |||| | |    
T  9353050 ataaaatcgtgccacgttttccaaatcgtgccacgattgatatgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaa 9352952  T
Q  301 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacga 400  Q
    |||||||||||||||| ||  |||||| ||||||||| ||||||||||||||||||||| ||  |  ||||||||||||||||||| | ||| |||||||    
T  9352951 atcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccacaatcgcgtcacga 9352852  T
Q  401 tttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||| || |||||||||||||||||||    
T  9352851 tttctctgttctttcaaaccacaaatttgaagccaa 9352816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 322 - 433
Target Start/End: Complemental strand, 36931966 - 36931855
Alignment:
Q  322 atcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacca 421  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  36931966 atcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaacca 36931867  T
Q  422 caaatttgaagc 433  Q
    ||||||||||||    
T  36931866 caaatttgaagc 36931855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 322 - 436
Target Start/End: Original strand, 15465002 - 15465116
Alignment:
Q  322 atcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacca 421  Q
    |||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  15465002 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagacca 15465101  T
Q  422 caaatttgaagccaa 436  Q
    |||||||||||||||    
T  15465102 caaatttgaagccaa 15465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 322 - 432
Target Start/End: Original strand, 29752267 - 29752377
Alignment:
Q  322 atcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacca 421  Q
    |||||| |||||||||||||||||||| | |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29752267 atcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacca 29752366  T
Q  422 caaatttgaag 432  Q
    |||||||||||    
T  29752367 caaatttgaag 29752377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 33768495 - 33768764
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  33768495 gcacaagaacactttaaatactagtcatgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 33768593  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   ||||||| || |     
T  33768594 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatc- 33768692  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   |||||||||||| ||||||| ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33768693 tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33768764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 33791627 - 33791896
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  33791627 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 33791725  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   ||||||| || |     
T  33791726 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatc- 33791824  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   |||||||||||| ||||||| ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33791825 tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33791896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 1457063 - 1456949
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  1457063 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 1456965  T
Q  145 tcttccaagctctttt 160  Q
    ||||||||||||||||    
T  1456964 tcttccaagctctttt 1456949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 259 - 437
Target Start/End: Complemental strand, 28807261 - 28807083
Alignment:
Q  259 tgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 357  Q
    ||||||||||||||||  |||||||||  | || |||||   ||||||||||||||||||||||||||| |||||||| |||||||||||||   |||||    
T  28807261 tgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctca 28807162  T
Q  358 cgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    || || | | | |||||||||||||  |||| ||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  28807161 cggcatc-tcagatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaat 28807083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 2785686 - 2785955
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacg-tcccaaggtatgaccag 265  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||  ||| |||| |||| |||||||    
T  2785686 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca-acgctccccaggt-tgaccag 2785783  T
Q  266 tccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacc 364  Q
    |||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   ||||||| || |    
T  2785784 tccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatc 2785883  T
Q  365 atgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
     |   |||||||||||| ||||||| ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  2785884 -tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 2785955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 30631598 - 30631728
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctc-actacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactc 98  Q
    |||||||||||||||||||||||| |  |||||||||| |||||| ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||    
T  30631598 agaggaagctttagatccttccaactaatgaactcctccactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactc 30631697  T
Q  99 aaccctttggttccctcaattgtaatccaag 129  Q
    ||||| |||||||||||  |||| |||||||    
T  30631698 aacccattggttccctcctttgttatccaag 30631728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 169 - 436
Target Start/End: Complemental strand, 37561223 - 37560955
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| | ||||||    
T  37561223 gcacaagaacacaatatatactagtcctgccctgaagaaatcgtgccacgatttccctagatcatgtcacgatctgcaacggtccccaggt-taaccagt 37561125  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||   ||||||||||||||||||||||||||| ||||||||| | || |  ||||  | |||||| || |     
T  37561124 ccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacggcatc- 37561026  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    | | |||||||||||||    || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  37561025 tcagatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37560955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 261 - 436
Target Start/End: Complemental strand, 37556308 - 37556133
Alignment:
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacg 359  Q
    ||||||||||||||  |||||||||  |||| |||||   |||||||||| |||||||||||||||| ||||||||| | || |  ||||  | ||||||    
T  37556308 accagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37556209  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
     || | | | |||||||||||||  | || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  37556208 gcatc-tcagatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37556133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 31396766 - 31396497
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||||||||||| || | | | |||||| ||||||||||||||| ||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  31396766 gcacaagaacactttaaatacaagtcctgccctgaagaaatcgtgtcacgattaccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 31396668  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacgacacca 365  Q
    ||||||||  || ||||||  | || || ||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||  |||||||  |  |     
T  31396667 ccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctc- 31396569  T
Q  366 tgaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   ||||||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  31396568 tccgatcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 31396497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 31401623 - 31401354
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||||||||||| || | | | |||||| ||||||||||||||| ||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  31401623 gcacaagaacactttaaatacaagtcctgccctgaagaaatcgtgtcacgattaccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 31401525  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  || ||||||  |||| |||||  |||| ||||||||||||||||||||||| |||||||| ||  || ||||||  |||||||  | |      
T  31401524 ccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgc-ctc 31401426  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   |||||||||||| ||||||| ||||| ||||||| |||| |||| ||| ||||||||||||||||||||    
T  31401425 tccgatcgtgtcacgattgccaaa-tcgtgacacgattcctctattctcccaaaccacaaatttgaagccaat 31401354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 3 - 240
Target Start/End: Original strand, 15464726 - 15464952
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||| |||| |||  |||| ||||||||| ||  ||| ||||||||||||||||||    
T  15464726 aggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtgtttacgatg--tttcccaacccaagagatcctcactacaaagacactcaacc 15464822  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttcc-aaatctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   ||| |||   |||||||||||| |||||||||        | ||||||||  ||| |||||||||||||||||| ||||||||||| ||||  ||    
T  15464823 ctaaagtttccttctttgtaatccaagtttctctctc--------ttcaagctctcctccaaaatctgcacaagaacac-ttaaatactagtcttctact 15464913  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt 240  Q
    ||   ||||||| ||||||||||| ||| | ||||||||    
T  15464914 gataaaatcgtgccacgatttccaaatcgtgtcacgatt 15464952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 36932255 - 36932119
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    |||||||||||| |||||||||||||||||| | ||||||||| |||||| ||||||||  |||| ||||||||| ||   || ||| ||||||||||||    
T  36932255 agaggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcatcactataaagacactcaa 36932159  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||||   ||||||||  ||| |||||||| ||||||||||    
T  36932158 ccctaaagttccctcctttgcaatccaagtttctctctct 36932119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 14520422 - 14520556
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||| | |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||    
T  14520422 aggaagcttttgatccttccaatggtgaaatc-tcactatccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 14520518  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||| ||||  |||||||| ||| ||||||||||    
T  14520519 ctaaagttacctcctttgtaatctaagtttctctctct 14520556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 31300494 - 31300364
Alignment:
Q  9 ctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttgg 108  Q
    |||| |||||||||||||||||| || |||||||| |||||| |||||||||||  ||||||||||| ||  ||| |||||||||||||||||| |   |    
T  31300494 cttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--ctcaacccaagagaacctcactacaaagacactcaaccttaaag 31300398  T
Q  109 ttccctcaattgtaatccaagattctctctctaa 142  Q
    || ||||  ||| |||||||| ||||||||||||    
T  31300397 ttacctcctttgcaatccaagtttctctctctaa 31300364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 24553421 - 24553296
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||| ||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| |||||||||||||||||||||  ||| ||    
T  24553421 gatccttctaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacccttaagttacc 24553325  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||||||||||| |||| |||||||    
T  24553324 tcctttgtaatccaagtttctttctctaa 24553296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 28832460 - 28832585
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||| ||   ||| ||    
T  28832460 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaactctaaagttacc 28832556  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||||||||||| ||||||||||||    
T  28832557 tcctttgtaatccaagtttctctctctaa 28832585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 11916877 - 11916746
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||| ||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||| ||||||||    
T  11916877 aggaagtttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagaaactcaacc 11916781  T
Q  103 ctttggttccctcaattgtaatccaagattctctc 137  Q
    ||   ||| ||||  |||||||||||| |||||||    
T  11916780 ctaaagttacctcctttgtaatccaagtttctctc 11916746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 14520799 - 14520846
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14520799 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 14520846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 43625605 - 43625648
Alignment:
Q  401 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 43625648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 436
Target Start/End: Complemental strand, 11916589 - 11916453
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
    |||||||||||| |||||||| |||||| |||||||  |||||||||||||||  |||||  | |    |||||||| |||| ||   || | |||||||    
T  11916589 aatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccacactcactgc-ctggaaaatcgtgacacgttgatgaaattgtgtcac 11916491  T
Q  399 gatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||| || |||||||||||||||||||    
T  11916490 gatttctctgttctttcaaaccacaaatttgaagccaa 11916453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 12083705 - 12083656
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  12083705 tcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaatat 12083656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 395 - 432
Target Start/End: Original strand, 35388196 - 35388233
Alignment:
Q  395 tcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaag 35388233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 42127264 - 42127139
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| ||||||  ||||||||||  ||||||||||| ||  ||| ||||||||| |||||||| |   ||| ||    
T  42127264 gatccttccaatggtgaaatc-tcactacccaaggtgtatacaatgttt--ctcaacccaagagaacctcactacaaagatactcaaccttaaagttacc 42127168  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||||||||||| ||||| ||||||    
T  42127167 tcctttgtaatccaagtttctcactctaa 42127139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 11181726 - 11181603
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| |  |||||||| |||||| |||||||||||  | ||||||||| ||  ||| |||||||||||||||||| |   ||| ||    
T  11181726 gatccttccaatggtgaaatt-tcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccataaagttacc 11181630  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||| ||||| ||||||||||    
T  11181629 tcctttgtaaaccaagtttctctctct 11181603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 17003853 - 17003730
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| ||||||||  ||||  |||||||| ||  ||| ||||||||||| ||||||||   |||  |    
T  17003853 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatg--tttccaaacccaagagaacctcactacaaagacattcaaccctaaagttatc 17003757  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  17003756 tcctttgtaatccaagtttctctctct 17003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 22536591 - 22536647
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgat 220  Q
    ||||||||||||||||||||||  |||||||||||||||||  | ||||||||||||||    
T  22536591 caaatctgcacaagaacacttt--atactagccttcctctgttgaaatcgtgtcacgat 22536647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 359
Target Start/End: Original strand, 35388155 - 35388192
Alignment:
Q  322 atcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    |||||||||| |||||||||||||||||||||||||||    
T  35388155 atcgtgtcacaatttggcaccctgcaaaccagctcacg 35388192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 42428864 - 42428913
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||||||    
T  42428864 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 42428913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 213066 - 213014
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 352  Q
    |||||||||||| |||||||| |||||||||||||| | | ||||||||||||    
T  213066 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacgccctgcaaacca 213014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 28751032 - 28751132
Alignment:
Q  304 gtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacga-tgccaaat-tcgtgtcacgat 401  Q
    |||||||| |||||||| ||||||||||||||   ||||||||||| || ||| |||||  | |||||||||  |||| |||||||| ||||||||||||    
T  28751032 gtgtcacgttttcccaaaatcgtgtcacgattgaacaccctgcaaaacaactctcgacattacgaaatcgtgaaacgattgccaaatatcgtgtcacgat 28751131  T
Q  402 t 402  Q
    |    
T  28751132 t 28751132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 19588948 - 19589035
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccct 104  Q
    |||||||||||||||||| || ||||| || ||| || |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||    
T  19588948 gatccttccaatggtgaaatc-tcactgcccaagatgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccct 19589035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 10281955 - 10282044
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaaccc--aagtgactctctctacaaagacactcaaccct 104  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||  ||| ||  ||| ||||||||||||||||||||    
T  10281955 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cacaaccctcaagagaacctcactacaaagacactcaaccct 10282044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 29722391 - 29722330
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc 224  Q
    ||||||||||||||||||| ||||||||  ||||||| ||||   ||||||||||||||||||    
T  29722391 caaatctgcacaagaacac-ttaaatacatgccttccactgataaaatcgtgtcacgatttcc 29722330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 7160798 - 7160689
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    ||||||||||||| |||| || |||||  | ||||||||||||||||||  | ||| ||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  7160798 gatccttccaatgatgaaatc-tcactgtccaaggtgattacaatgttt--cccaatccaagagaacctcactacaaagacactcaaccctaaagttacc 7160702  T
Q  114 tcaattgtaatcc 126  Q
    ||| |||||||||    
T  7160701 tcatttgtaatcc 7160689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 16407923 - 16407848
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatt 221  Q
    ||||||||| |||| ||| ||||||||||||||| |||| ||||||||||| ||| ||||   |||||||||||||||    
T  16407923 ctcttccaa-ctctcttcaaaatctgcacaagaatactt-aaatactagccctccactgataaaatcgtgtcacgatt 16407848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 42426685 - 42426730
Alignment:
Q  304 gtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||| |||||||| |||||||||||||| | |||||||||||    
T  42426685 gtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 42426730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 101)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 445
Target Start/End: Original strand, 8477557 - 8478003
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  8477557 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactca 8477656  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctg--cacaagaacactttaaatactagccttc 197  Q
    ||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||| |||||||  ||  ||||||||||||| ||||||||||||||    
T  8477657 accctttggttccctcctctgtaatccaagtttctctctctaagctcttccaagctctcttccaaaaatgaacacaagaacactt-aaatactagccttc 8477755  T
Q  198 ctctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  8477756 ctctgaagcaatcgtgtcacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttc 8477855  T
Q  298 acaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtca 397  Q
     ||||||||||||||||||||||||||||| |||||||||||| || |||||| |||||||| ||||  |||||||||||||||||||||| ||||||||    
T  8477856 tcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtca 8477955  T
Q  398 cgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||    
T  8477956 caatttctctgttcttccagaccacaaatttgaagccaatgtcaacag 8478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 40372700 - 40372256
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  40372700 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactca 40372601  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||  || ||||||| ||||||    
T  40372600 accctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcttacaaatctgcacaagaacacaatatatactagtcttcct 40372501  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||| ||||||||||||||||||||||| |  |||||||||||| ||| || |||||||||||||||||||||||||||||||| ||||| |||||      
T  40372500 ctgaagaaatcgtgtcacgatttccagatcgtggcacgatttgcgtccgttcccaggtatgaccagtccttatcaaggatacttaacgagcaagtttctg 40372401  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| ||||  |||||||||||||||||||||| ||||||||||    
T  40372400 aatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacg 40372301  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40372300 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 40372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 1 - 444
Target Start/End: Original strand, 7167437 - 7167882
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgttttt-ctcaacccaagtgactctctctacaaagacactc 98  Q
    |||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||||||||| | ||||||||| ||| ||||| ||||||||||||    
T  7167437 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaacccaagagacactctcaacaaagacactc 7167536  T
Q  99 aaccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcc 198  Q
    |||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||  || ||||||| |||||    
T  7167537 aaccctttggttccctcctttgttatccaagtttctctctctaagctcttccaagctctatcccaaatctgcacaagaacacaatatatactagtcttcc 7167636  T
Q  199 tctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttca 298  Q
    ||||||| ||||||| || ||||| || ||| | |||||||||||||  | |||||||||||||||||||||||||  ||||||||| ||||| |||||     
T  7167637 tctgaagaaatcgtgccatgattttcaaatcgtgtcacgatttgcgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttct 7167736  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
     |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| |||| |||||| |||||||||||||||| |||||||||    
T  7167737 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaattgtgtcacgatgccaaaatcgtgtcac 7167836  T
Q  399 gatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  7167837 gatttctctgttcttccagaacacaaatttgaagccaatatcaaca 7167882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 9091205 - 9090823
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||| ||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||  |||||||||||||||||||    
T  9091205 agaggaagctttagatcctttcaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactca 9091106  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||  | ||||   ||||||||||||  || ||||||| ||||||    
T  9091105 accctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagacttcct 9091006  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||||||||||| ||||||||||||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||      
T  9091005 ctgaagcaatcgtgccacgatttccagatcatgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctg 9090906  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
    |||||||||||||||||||||||||||| |||||||| ||  ||||||||| |||||||| |||| ||||||| |||||||||    
T  9090905 aatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcaccttgaaatcatgtcacgat 9090823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 28503768 - 28503319
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||| |||||| ||||||||| ||| ||||| |||||||||||||    
T  28503768 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatatttttcccaacccaagagacactctcaacaaagacactca 28503669  T
Q  100 acccttt-ggttccctcaattgtaatccaagat---tctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagcct 195  Q
    ||||||| |||||||||  |||| ||||||| |   ||||||||||||||||||||||||||  | ||||   ||||||||||||  || ||||||| ||    
T  28503668 acccttttggttccctcctttgttatccaagttctctctctctctaagctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagtct 28503569  T
Q  196 tcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatg 293  Q
    |||||||||||||||||| ||||||||||  ||||| | |||||||||||||  | |||||||| |||| ||||||||||| |||||||||| ||||| |    
T  28503568 tcctctgaagcaatcgtgccacgatttcccaagatcgtgtcacgatttgcgtctgacccaaggt-tgacaagtccttatcagggatacttaacgagcaag 28503470  T
Q  294 tttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgt 393  Q
    ||||  ||| |||||||||||||||||||||||| |||||||||||  || |||||| |||||||| | || ||||||||||||||||||||||| ||||    
T  28503469 tttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgt 28503370  T
Q  394 gtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28503369 gtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 8738967 - 8738585
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||| ||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||  |||||||||||||||||||    
T  8738967 agaggaagctttagatcctttcaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactca 8738868  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    |||| |||||||||||  ||| |||||||| |||||||||||||||||||||||||||  | ||||   ||||||||||||  || ||||||| ||||||    
T  8738867 acccattggttccctcctttgcaatccaagtttctctctctaagctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagacttcct 8738768  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||||||||||| ||||||||||||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||      
T  8738767 ctgaagcaatcgtgccacgatttccagatcatgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctg 8738668  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
    |||||||||||||||||||||||||||| |||||||| ||  ||||||||| |||||||| |||| ||||||| |||||||||    
T  8738667 aatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcaccttgaaatcatgtcacgat 8738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 28501601 - 28501152
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||    
T  28501601 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactca 28501502  T
Q  100 acccttt-ggttccctcaattgtaatccaagat---tctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagcct 195  Q
     |||||| |||||||||  |||| ||||||| |   ||||||||||||||||||||||||||  | ||||   ||||||| ||||  || ||||||| ||    
T  28501501 tcccttttggttccctcctttgttatccaagttctctctctctctaagctcttccaagctctccttcaaaaaagcacaagtacacaatatatactagtct 28501402  T
Q  196 tcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatg 293  Q
    |||||||||||||||||| ||||||||||  ||||| | ||| |||||||||  | |||||||| |||| ||||||||||| |||||||||| ||||| |    
T  28501401 tcctctgaagcaatcgtgccacgatttcccaagatcgtgtcatgatttgcgtctgacccaaggt-tgacaagtccttatcagggatacttaacgagcaag 28501303  T
Q  294 tttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgt 393  Q
    ||||  |||||||||||||||| ||||||||||| ||||||||||   ||||||||| |||||||| | || ||||||||||||||||||||||| ||||    
T  28501302 tttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgt 28501203  T
Q  394 gtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28501202 gtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 1 - 398
Target Start/End: Complemental strand, 2671490 - 2671111
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  2671490 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactca 2671391  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||  || ||||||| ||||||    
T  2671390 accctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctttcacaaatctgcacaagaacacaatatatactagtcttcct 2671291  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||| ||||||||||||                   ||||||||||  |||||||||||||||||||||||||||||||||||| ||||| |||||      
T  2671290 ctgaagaaatcgtgtcacg-------------------atttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcta 2671210  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| |||| ||||||| ||||||||||||||| |||||||||    
T  2671209 aatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcatgtcacgatgccaaaatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 1306140 - 1306595
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||| ||||||||||||||||||| || |||||||| |||||| |||||||||||||| ||||||||| ||  ||| ||||||||||||||||    
T  1306140 agaggaagcttaagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaa 1306238  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaat-ctgcacaagaacactttaaatactagccttcct 199  Q
    | ||   ||||||||  || ||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||| ||||||||| |||||     
T  1306239 ctctagagttccctcctttataatccaagtttctctctctaagctcttccaagctctcctccaaaaactgcacaagaacactt-aaatactagtcttcca 1306337  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgc---------------------gtacgtcccaaggtatgaccagtccttatcaagga 278  Q
    ||||   |||||||||||||||||||  || | ||||||||| |                     ||||||| ||||||| |||| |||||||||  |||    
T  1306338 ctgataaaatcgtgtcacgatttccaagtcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctgga 1306437  T
Q  279 tacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtca 378  Q
     |||||| ||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1306438 aacttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtca 1306537  T
Q  379 cgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  1306538 cgatgccaaattcatgtcacgatttctctgttcttccagaccataaatttgaagccaa 1306595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 27352363 - 27352081
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatga 261  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||||||| ||||||||||| ||| | ||||||||||||| |||||||||||||||    
T  27352363 caaatctgcacaagaacacaatatatattagccttcctctgaagcaatcgtgccacgatttccaaatcgtgtcacgatttgcgtccgtcccaaggtatga 27352264  T
Q  262 ccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgac 361  Q
    |||||||||||||  |||| |||| ||||| |||||  |||||||||||||||||||||||||||| ||||||||||    |||||||| |||||||| |    
T  27352263 ccagtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaaacaagctcacggc 27352164  T
Q  362 accatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| |||| ||||||||||    
T  27352163 accttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaaatttaaagctaatatcaaca 27352081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 144 - 436
Target Start/End: Original strand, 23198229 - 23198521
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttg- 242  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||||| ||||| ||||   ||||||||||||||||||| ||| | |||||||| |     
T  23198229 ctcttccaa-ctctcttcaaaatctgcacaagaacactt-aaatactagtcttccactgataaaatcgtgtcacgatttccaaatcgtgtcacgattggt 23198326  T
Q  243 -cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcac 341  Q
     |||||||| ||||||| ||||||||||||||  ||| |||||| ||||| ||||   ||||||||||||||| | | | ||||||||||||||||||||    
T  23198327 acgtacgtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcac 23198426  T
Q  342 cctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||||| || ||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23198427 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23198521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 54634991 - 54634710
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||||| ||  ||| | ||| |||||||||||  ||||||  | |    
T  54634991 caaatctgcacaagaacacttta--tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcatgatttgcgtaccacccaagaaaag 54634894  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||  |||||| |||||||| |||||||||||   ||||||||     
T  54634893 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctcacgg 54634794  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||  ||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  54634793 caccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 54634710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 3 - 436
Target Start/End: Complemental strand, 33386569 - 33386146
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  ||||||||||| ||  ||| ||||||||||||||||||    
T  33386569 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--ctcaacccaagagatcctcactacaaagacactcaacc 33386473  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   |||| |||  |||||||||||| ||||||||||         ||||||||  |||||| ||||||||||||||||| |||||| || ||||  ||    
T  33386472 ctaaagttctctcctttgtaatccaagtttctctctctt--------caagctctactccaaaatctgcacaagaacactt-aaataccagtcttcagct 33386382  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||   ||||||| ||| ||||||| ||| | ||||||||  | |||||| |||||| || |||||  |||||||  | | ||||||  |||| |||| |     
T  33386381 gataaaatcgtgccacaatttccaaatcgtgtcacgattgatacgtacgacccaagatacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaa 33386283  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||||||||||||||||    
T  33386282 aatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacg 33386183  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||| | ||||||||||||||||||||    
T  33386182 atttctctgttctttcggaccacaaatttgaagccaa 33386146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 6716366 - 6716085
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||||||||  |||||| |||||||||  | |||||||||||||||| ||| ||| | |||||||  ||||||  ||||||  | |    
T  6716366 caaatctgcacaagaacacttta--tactagtcttcctctgttgaaatcgtgtcacgattttccaaatcgtgtcacgatccgcgtaccacccaagaaacg 6716269  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||  |||||| |||||||| ||||||||||| | ||||||||     
T  6716268 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacgg 6716169  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||    
T  6716168 caccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaatctcaaca 6716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 144 - 436
Target Start/End: Original strand, 23200428 - 23200720
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttg- 242  Q
    ||||||||| |||| ||| |||||||||||| ||||||| |||||| || ||||| ||||   ||||||||||||||||||| ||| | |||||||| |     
T  23200428 ctcttccaa-ctctcttcaaaatctgcacaaaaacactt-aaataccagtcttccactgataaaatcgtgtcacgatttccaaatcgtgtcacgattggt 23200525  T
Q  243 -cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcac 341  Q
     |||| ||| ||||||| ||||||||||||||  ||| |||||| ||||| ||||   ||||||||||||||| | | | ||||||||||||||||||||    
T  23200526 acgtaagtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcac 23200625  T
Q  342 cctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||||  || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23200626 cctgcaaaccagctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 169 - 444
Target Start/End: Original strand, 18656752 - 18657029
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  18656752 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 18656850  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagct-cacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||| |||||    
T  18656851 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcacca 18656950  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     |||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  18656951 cgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 18657029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 144 - 444
Target Start/End: Complemental strand, 25637313 - 25637013
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttg 242  Q
    ||||||||| ||| | | ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||    
T  25637313 ctcttccaacctcctcttcaaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttg 25637215  T
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 342  Q
    ||| |||||||||| | |||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||  |||||| |||||||||   ||    
T  25637214 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgatttgcaccc 25637115  T
Q  343 ctgcaaacc-agctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 441  Q
    |||||| || ||||| || ||||  |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||| ||| |||| |||    
T  25637114 ctgcaaccctagctctcg-cacctcgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagacaatctca 25637016  T
Q  442 aca 444  Q
    |||    
T  25637015 aca 25637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 800969 - 800698
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtat 259  Q
    ||||| ||||||||||||||| ||||| ||||| ||  ||||   ||||||||||||||||||||  | | ||||||||  ||||| |||||||||  |     
T  800969 caaatatgcacaagaacactt-aaatattagccctctactgataaaatcgtgtcacgatttccaggccgtgtcacgattggtgcgttcgtcccaagaaac 800871  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    ||||| ||||||||| ||| |||||| ||||| ||||   ||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  800870 gaccattccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacg 800771  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
     || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  800770 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaag 800698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 259 - 444
Target Start/End: Complemental strand, 22172847 - 22172662
Alignment:
Q  259 tgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 358  Q
    ||||||||||||||||  ||| ||||| ||||| |||||  |||||||||||||||||||||||||||| |||||||||||  |||||||||  ||||||    
T  22172847 tgaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 22172748  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    | ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172747 ggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 22172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 3 - 436
Target Start/End: Original strand, 27453152 - 27453572
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  |  |||||||| ||  ||| |||||  |||||||||||    
T  27453152 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttgcc--aacccaagagatcctcactaca--gacactcaacc 27453246  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctg 202  Q
    ||   ||||||||  |||||||||||| ||||||||||         |||||||| ||| ||| |||||||||||||||| ||| ||||| ||||  |||    
T  27453247 ctaaagttccctcctttgtaatccaagtttctctctctt--------caagctctcttcaaaaactgcacaagaacacttaaaa-actagtcttcaactg 27453337  T
Q  203 aagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcaca 300  Q
    |   ||||||| ||||||||||| ||| | ||||||||  | |||||||| ||||||| |||||  |||||||  | | ||||||  |||| |||| | |    
T  27453338 ataaaatcgtgccacgatttccaaatcgtgtcacgattgatacgtacgtcacaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaa 27453436  T
Q  301 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacga 400  Q
    |||||||||||||| | ||  ||| ||||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||||||||||||||||| |    
T  27453437 atcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaa 27453536  T
Q  401 tttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||| |||| ||||||||||||||||||||||    
T  27453537 tttctctgctctttcagaccacaaatttgaagccaa 27453572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 3617316 - 3617034
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  3617316 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 3617218  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||| |||||||||   |||||||| || ||||||||    
T  3617217 accagccgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacgatttgcacccctgcaaccctagctcacg 3617118  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     || |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3617117 gcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 162 - 444
Target Start/End: Original strand, 4598824 - 4599107
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  4598824 caaatctgcacaagaacactt-aagtactagtcttcctctgtttcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 4598922  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttccca-agatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   ||||||||||||||||||| | |||||| |||||||||   |||||||| || |||||||    
T  4598923 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcac 4599022  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    | || |  ||||||||||| |||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  4599023 ggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 162 - 444
Target Start/End: Original strand, 4601045 - 4601328
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  4601045 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 4601143  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttccca-agatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   ||||||||||||||||||| | |||||| |||||||||   |||||||| || |||||||    
T  4601144 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcac 4601243  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    | || |  ||||||||||| |||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  4601244 ggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 10058310 - 10058039
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | |||||||||||||||||||||||| | |    
T  10058310 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacg 10058212  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| ||||||||||||||||   |||||||| || | |||||    
T  10058211 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 10058112  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    | || |  ||||||| |||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  10058111 ggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 10060532 - 10060261
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | |||||||||||||||||||||||| | |    
T  10060532 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacg 10060434  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| ||||||||||||||||   |||||||| || | |||||    
T  10060433 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 10060334  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    | || |  ||||||| |||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  10060333 ggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10060261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 10062754 - 10062483
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | |||||||||||||||||||||||| | |    
T  10062754 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacg 10062656  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| ||||||||||||||||   |||||||| || | |||||    
T  10062655 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 10062556  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    | || |  ||||||| |||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  10062555 ggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 10064976 - 10064705
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | |||||||||||||||||||||||| | |    
T  10064976 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacg 10064878  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| ||||||||||||||||   |||||||| || | |||||    
T  10064877 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 10064778  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    | || |  ||||||| |||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  10064777 ggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10064705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 243 - 436
Target Start/End: Complemental strand, 26928282 - 26928089
Alignment:
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 342  Q
    |||| ||| ||||||| |||| |||||||||  | | |||||| ||||| |||| | ||||||||||||||| | |||||| ||||||||||||||||||    
T  26928282 cgtaagtcacaaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagattgtgtcacgatttggcacc 26928183  T
Q  343 ctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||| ||  |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26928182 ctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 26928089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 162 - 446
Target Start/End: Complemental strand, 10056088 - 10055803
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  10056088 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 10055990  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| ||||||||||||||||   |||||||| || | |||||    
T  10055989 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 10055890  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 446  Q
    | || |  ||||||| |||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||  ||||||||    
T  10055889 ggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaacagt 10055803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 10067198 - 10066927
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  10067198 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 10067100  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| ||||||||||||||||   |||||||| || | |||||    
T  10067099 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 10067000  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    | || |  ||||||| |||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  10066999 ggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10066927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 32143513 - 32143884
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    |||||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||| |  |||||||| ||   || ||||||||||||||||    
T  32143513 agaggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttttcc--aacccaagagatcatcactacaaagacactcaa 32143609  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcct 199  Q
    ||||   ||||||||  |||||||||||  ||||||||||         ||| ||||  |||||| ||||||||||||||||| |||||| || ||||      
T  32143610 ccctagagttccctcctttgtaatccaaatttctctctctt--------caa-ctctcctccaaaatctgcacaagaacactt-aaatacaagtcttcaa 32143699  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
    ||||   ||||||||||||||||||| ||| | ||||||||  | |||||||| ||||||| |||| |||||||||  | | |||||| ||||| ||||     
T  32143700 ctgataaaatcgtgtcacgatttccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacctgtccttatcttgaaaacttaacgagcaagtttg 32143799  T
Q  298 acaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
    | ||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| || ||  |||||||||||||||    
T  32143800 aaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 10211261 - 10210978
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  10211261 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 10211163  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   ||||||||| || |||||||| |||||| |||||||||   |||||||| || | |||||    
T  10211162 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactcac 10211063  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    | || | | |||||| |||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||| ||| |||| ||||||    
T  10211062 ggcatcct-aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 162 - 382
Target Start/End: Complemental strand, 45282847 - 45282628
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||||||||  ||||||||||||||||  | |||||||||||||||| ||  ||| | ||||||| |||||||  ||||||  | |    
T  45282847 caaatctgcacaagaacacttta--tactagccttcctctgttgaaatcgtgtcacgattttcccaatcgtgtcacgatctgcgtaccacccaagaaacg 45282750  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||||||||| || ||||||||||| | ||||||||     
T  45282749 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctcacgg 45282650  T
Q  361 caccatgaaatcgtgtcacgat 382  Q
    ||||  ||||||||||||||||    
T  45282649 caccccgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 162 - 382
Target Start/End: Complemental strand, 6718550 - 6718331
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttc-cagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||||||||  |||||| |||||||||  | ||||||||||||||||  || ||| | |||||||  ||||||  ||||||  | |    
T  6718550 caaatctgcacaagaacacttta--tactagtcttcctctgttgaaatcgtgtcacgatttttcaaatcgtgtcacgatccgcgtaccacccaagaaacg 6718453  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||  |||||| |||||||| ||||||||||| | ||||||||     
T  6718452 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacgg 6718353  T
Q  361 caccatgaaatcgtgtcacgat 382  Q
    ||||  ||||||||||||||||    
T  6718352 caccccgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 162 - 436
Target Start/End: Original strand, 7782449 - 7782703
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||   ||||||||||||||||||||||| | |||||||| |  ||| |||||||||| |     
T  7782449 caaatctgcacaagaacactt-aaatactagccctccactgataaaatcgtgtcacgatttccagatcgtgtcacgattggtacgttcgtcccaaggcac 7782547  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    ||||||||||||||| ||| |||||| ||||| ||||   |||||||||||||                     |||||||||||||||||||||||||     
T  7782548 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacga---------------------tttggcaccctgcaaaccagctcacc 7782626  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
     || || |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  7782627 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctagaccacaaatttgaagccaa 7782703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 300 - 436
Target Start/End: Original strand, 37726154 - 37726290
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    ||||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||| || ||  |||||||||||||||  |||||||||||||||    
T  37726154 aatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatatcaaattcgtgtcacg 37726253  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||| |||||||||||||||||||    
T  37726254 atttctctgttcttccaaaccacaaatttgaagccaa 37726290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 233 - 444
Target Start/End: Complemental strand, 10208990 - 10208778
Alignment:
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcac 331  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||| |||| ||||| |||||   |||||||||||| |||||||| |||||| |||    
T  10208990 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccac 10208891  T
Q  332 gatttggcaccctgcaaacc-agctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttga 430  Q
    ||||||   |||||||| || | |||||| || |  ||||||| |||||||| ||||| |||||||| |||||| ||||||||||| |||||||||||||    
T  10208890 gatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttga 10208792  T
Q  431 agccaatatcaaca 444  Q
    || |||| ||||||    
T  10208791 agacaatctcaaca 10208778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 169 - 436
Target Start/End: Complemental strand, 2672695 - 2672427
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  2672695 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 2672597  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   |||| || || |     
T  2672596 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcccggcatc- 2672498  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |   |||||||||||||  |||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2672497 tccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2672427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 169 - 436
Target Start/End: Complemental strand, 2676851 - 2676583
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  2676851 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 2676753  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  ||| |||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   |||| ||||| |     
T  2676752 ccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcccgacatc- 2676654  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |   |||||||||||||  |||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2676653 tccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2676583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 300 - 436
Target Start/End: Complemental strand, 37408180 - 37408045
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||||||| |  | |||||| ||||||||| ||||||||||||||||||||| ||| |  ||||||||||||||||||| | ||||||||||    
T  37408180 aatcgtgtcacgatttacaca-atcgtgccacgatttgacaccctgcaaaccagctcacggcactacaaaatcgtgtcacgatgccacaatcgtgtcacg 37408082  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||| |||||||||| |||||||||||||||||||    
T  37408081 atttctttgttcttccaaaccacaaatttgaagccaa 37408045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 169 - 336
Target Start/End: Original strand, 24968428 - 24968596
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| ||| | |||||| ||||||| ||||||||||  ||||| |  ||||||||||    ||||| |||| ||||||||    
T  24968428 gcacaagaacactttaaatactagtcttgccctgaagaaatcgtgccacgatttccctagatcgtggcacgatttgcaacggtccccaggt-tgaccagt 24968526  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 336  Q
    ||||||||  || ||||||  |||| |||||  |||||||||||||||||||||||||||| ||||||||    
T  24968527 ccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 24968596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 3 - 182
Target Start/End: Complemental strand, 27986350 - 27986182
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||    
T  27986350 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 27986254  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactt 182  Q
    ||   ||||||||  |||||||||||| ||||||       ||||||||| |||| ||||||||||||||||||||||||    
T  27986253 ctaaagttccctcctttgtaatccaagtttctct-------ctcttccaa-ctctcttccaaatctgcacaagaacactt 27986182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 32475795 - 32476064
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | | |||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| | | |||||||||    
T  32475795 gcacaagaacactttaaatactagtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaag-atgaccagt 32475893  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcac-gacacc 364  Q
    ||||||||  |||||||||  |||| |||||  ||||||||||||||||||||||||||||||||||||| ||   | |  |||  | ||||| | | ||    
T  32475894 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcactgcctcc 32475993  T
Q  365 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
     |||  ||||||||||||| | || ||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  32475994 ctga--tcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32476064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 22173096 - 22172982
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| ||||||||||   |||  ||||||| |||||| |||||||    
T  22173096 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctactttgctatccaag-ttctctttctaagc 22172998  T
Q  145 tcttccaagctctttt 160  Q
    || | |||||||||||    
T  22172997 tcatacaagctctttt 22172982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 3 - 382
Target Start/End: Complemental strand, 27974846 - 27974477
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | | ||||||| ||  ||| ||||||||||||||||||    
T  27974846 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccgacccaagagatcctcactacaaagacactcaacc 27974750  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctct-tttccaaatctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   ||| ||||  |||||||||||| |||||||||        | ||||||||  ||| |||||||||||||||||| ||| |||  || ||||  ||    
T  27974749 ctaaagttacctcctttgtaatccaagtttctctctc--------ttcaagctctccttcaaaatctgcacaagaacac-ttatataacagtcttcagct 27974659  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||   ||||||| ||| ||||||| ||| | ||||||||  | |||||| |||||||||  ||||  |||||||| | | | ||||  |||| |||| |     
T  27974658 gataaaatcgtgccacaatttccaaatcatgtcacgattgatacgtacgacccaaggtacaacca-accttatcatgaaaatttaaccagcaagtttgaa 27974560  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
    |||| ||||| |||||  ||  |||||| ||||||||| ||||||||||||||||||||| ||  |  |||||||||||||||    
T  27974559 aatcatgtcaagatttaacacaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 27974477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 32480653 - 32480922
Alignment:
Q  169 gcacaagaacactttaaatactag-ccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccag 265  Q
    |||||||||||||||||||||||| ||| |||  |||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| | | ||||||||    
T  32480653 gcacaagaacactttaaatactagtcctgccta-gaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaag-atgaccag 32480750  T
Q  266 tccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcac-gacac 363  Q
    |||||||||  |||||||||  |||| |||||  ||||||||||||||||||||||||||||||||||||| ||   | |  |||  | ||||| | | |    
T  32480751 tccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcactgcctc 32480850  T
Q  364 catgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    | |||  ||||||||||||| | || ||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  32480851 cctga--tcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32480922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 8512551 - 8512820
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | |   |||| | ||||||| ||||||||||  ||||| | ||||||| |||    ||||| | || ||||||||    
T  8512551 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagt-tgaccagt 8512649  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac-gacacc 364  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||  ||||||| | | ||    
T  8512650 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctcc 8512749  T
Q  365 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
     ||  ||||||||||||   |||| ||||| ||||||| ||||||||| ||| ||||| ||||||||| ||||    
T  8512750 ctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 8512820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 26928495 - 26928359
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    |||||||||||| |||||||||||||||||| || ||| |||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||    
T  26928495 agaggaagcttttgatccttccaatggtgaaatc-tcattacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaa 26928399  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||||   ||||||||  |||||||||||| || |||||||    
T  26928398 ccctagagttccctcgtttgtaatccaagtttttctctct 26928359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 8738593 - 8738542
Alignment:
Q  393 tgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8738593 tgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 9090831 - 9090780
Alignment:
Q  393 tgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9090831 tgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9090780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 21711414 - 21711582
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||  |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||    
T  21711414 aggaagcttttgatccttccaatggtgaaatc-tcactactcaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 21711510  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactt 182  Q
    ||   ||| ||||  |||||||||||| |||||||||        | |||||||| ||| ||||||||||||||||||||    
T  21711511 ctaaagttacctcctttgtaatccaagtttctctctc--------ttcaagctctcttcaaaatctgcacaagaacactt 21711582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 169 - 336
Target Start/End: Original strand, 8517431 - 8517599
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | |   |||| | ||||||| ||||||||||  ||||| | ||||||| |||    ||||| | || ||||||||    
T  8517431 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagt-tgaccagt 8517529  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 336  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| ||||||||    
T  8517530 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 8517599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 300 - 382
Target Start/End: Complemental strand, 27986083 - 27986001
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
    ||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||| || ||  |||||||||||||||    
T  27986083 aatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 27986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 39032448 - 39032315
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  |  |||||||| || |||| ||||||||||||||||||    
T  39032448 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttacc--aacccaagaga-tctcactacaaagacactcaacc 39032353  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||| ||||  |||||||||||| ||||||||||    
T  39032352 ctaaagttacctcctttgtaatccaagtttctctctct 39032315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 368 - 439
Target Start/End: Original strand, 36029640 - 36029711
Alignment:
Q  368 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    |||||||| |||| ||  ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36029640 aaatcgtgacacgttgataaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 36029711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 40592665 - 40592542
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  40592665 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacc 40592569  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  40592568 tcctttgtaatccaagtttctctctct 40592542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 47923787 - 47923664
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| || |||| |||||||||||||||| |||   ||| ||    
T  47923787 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagattctcactacaaagacactcaatcctaaagttacc 47923691  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  47923690 tcctttgtaatccaagtttctctctct 47923664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 8370383 - 8370249
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    ||||| |||| |||||||||||||||||| || |||||||| ||| || |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||    
T  8370383 aggaaacttttgatccttccaatggtgaaatc-tcactacccaagatgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 8370287  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||| ||||  |||||||||||| ||||||||||    
T  8370286 ctaaagttacctcctttgtaatccaagtttctctctct 8370249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 16264541 - 16264671
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||| ||||||||  |||| ||||||||| ||  |||  |||||||||||||||||    
T  16264541 aggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcattacaaagacactcaacc 16264637  T
Q  103 ctttggttccctcaattgtaatccaagattctct 136  Q
    ||   ||| ||||  |||||||||||| ||||||    
T  16264638 ctaaagttacctcctttgtaatccaagtttctct 16264671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 36029285 - 36029383
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||| ||||||||  |||| ||||||||| ||  ||| ||||||||||||||||||    
T  36029285 aggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaacc 36029381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 300 - 432
Target Start/End: Original strand, 27027186 - 27027318
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
    |||||||||||| |||||||| |||||| |||||||  |||| |||||||||| ||||||  | |   |||||||||| ||| ||   || |||||||||    
T  27027186 aatcgtgtcacgttttcccaaaatcgtgacacgattgagcactctgcaaaccatgctcactgc-ctgggaaatcgtgttacgttgatgaaatcgtgtcac 27027284  T
Q  399 gatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||||||||||||| |||||||||||||||    
T  27027285 gatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 30709313 - 30709264
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30709313 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 30709264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 1736187 - 1736064
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||  ||  ||| ||||||||||||||||||||   ||| ||    
T  1736187 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaatagatcctcactacaaagacactcaaccctaaagttacc 1736091  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  1736090 tcctttgtaatccaagtttctctctct 1736064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 21711771 - 21711818
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21711771 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 385 - 436
Target Start/End: Complemental strand, 27974493 - 27974442
Alignment:
Q  385 caaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 27974442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 6718342 - 6718288
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6718342 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 300 - 437
Target Start/End: Original strand, 27038521 - 27038658
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
    |||||||||||  |||||||| |||||| || ||||  ||||||||||||||| ||||||  | |   |||||||||||||| ||   || |||||||||    
T  27038521 aatcgtgtcacattttcccaaaatcgtgacatgattgagcaccctgcaaaccatgctcactgc-ctgggaaatcgtgtcacgttgatgaaatcgtgtcac 27038619  T
Q  399 gatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||||||||||| ||||| |||||||| |||||||||||    
T  27038620 gatttctctgtttttccaaaccacaaacttgaagccaat 27038658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 390 - 436
Target Start/End: Original strand, 32143873 - 32143919
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32143873 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 32143919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 300 - 432
Target Start/End: Complemental strand, 40734218 - 40734087
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
    |||||||||||| |||||||| |||||| |||||||  ||||||||||||||| ||||||  |     ||||||||| || | ||   || |||||||||    
T  40734218 aatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgcttg--gaaatcgtgacatgttgatgaaatcgtgtcac 40734121  T
Q  399 gatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||||||||||||| |||||||||||||||    
T  40734120 gatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 45282639 - 45282585
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  45282639 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 45282585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 439
Target Start/End: Original strand, 16264899 - 16264948
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  16264899 tcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaatat 16264948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 6794609 - 6794473
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| | || ||||||||||||| || |||||||| |||||| |||||||||||  | |||| |||| ||  ||| |||||| |||||||||||    
T  6794609 aggaagcttttgttcattccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaactcaagagaacctcactacaatgacactcaacc 6794513  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaa 142  Q
    ||   ||| ||||  |||||||||||| ||||||||||||    
T  6794512 ctaaagttacctcctttgtaatccaagtttctctctctaa 6794473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 439
Target Start/End: Original strand, 35925970 - 35926108
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
    |||||||||||| |||| |||  ||||| |||||||  ||||||||||||||| ||||||  | |   ||||||||| |||| ||   || |||||||||    
T  35925970 aatcgtgtcacgttttctcaaactcgtgacacgattgagcaccctgcaaaccatgctcactgc-ctgggaaatcgtgacacgttgatgaaatcgtgtcac 35926068  T
Q  399 gatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  35926069 gatttctctgttcttccaaacc-caaatttgaagccaatat 35926108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 1730959 - 1730916
Alignment:
Q  394 gtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaat 1730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 16498688 - 16498637
Alignment:
Q  393 tgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  16498688 tgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 16498637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 39032072 - 39032025
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  39032072 tcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 39032025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 35925670 - 35925768
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||| ||||||||  |||| ||||||||  ||  ||| ||||||||||| ||||||    
T  35925670 aggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaaaagatcctcactacaaagacattcaacc 35925766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 432
Target Start/End: Complemental strand, 40735149 - 40735018
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
    |||||||||||| |||||||| |||||| |||||||  ||||||||||||||| ||||||    |   ||||||||| |||| ||   || |||||||||    
T  40735149 aatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcac--tgcttggaaatcgtgacacgttgatgaaatcgtgtcac 40735052  T
Q  399 gatttctctgttcttccagaccacaaatttgaag 432  Q
    ||||| ||||||| |||| |||||||||||||||    
T  40735051 gatttatctgttcatccaaaccacaaatttgaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 26299196 - 26299316
Alignment:
Q  19 ttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaat 118  Q
    ||||||||||||| || |||||||| |||||| ||||||||  |||| ||||||||| ||  ||| ||||||||||| ||||||||   ||| ||||  |    
T  26299196 ttccaatggtgaaatc-tcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacattcaaccctaaagttacctcctt 26299292  T
Q  119 tgtaatccaagattctctctctaa 142  Q
    | ||||||||| ||||||||||||    
T  26299293 tataatccaagtttctctctctaa 26299316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 40592296 - 40592252
Alignment:
Q  393 tgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  40592296 tgtcacgatttctccgttcttccaaaccacaaatttgaagccaat 40592252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 48438785 - 48438833
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 438  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||||    
T  48438785 tcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaata 48438833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 24695049 - 24694926
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||| ||||||||||||| || |||| ||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  24695049 gatcattccaatggtgaaatc-tcaccacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacc 24694953  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||  ||||||||||    
T  24694952 tcctttgtaatccaaatttctctctct 24694926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 5258591 - 5258653
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    ||||||||||||||||||||| |||||||||||||| | | || || |||||||||| |||||    
T  5258591 aatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccttgaaaaccagctctcgaca 5258653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 27986017 - 27985971
Alignment:
Q  385 caaattcgtgtcacgatttctctgttcttccagaccacaaatttgaa 431  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 37725871 - 37726001
Alignment:
Q  7 agctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacccttt 106  Q
    |||||| ||||||| |||||||||| || |||||| | |||||| ||| |||||||  | | ||||||| ||  ||| ||||||||||||||||||||      
T  37725871 agcttttgatcctttcaatggtgaaatc-tcactatccaaggtgtttataatgttt--ccccacccaagagatcctcactacaaagacactcaaccctaa 37725967  T
Q  107 ggttccctcaattgtaatccaagattctctctct 140  Q
     ||| ||||  |||||||||||| ||||||||||    
T  37725968 agtttcctcctttgtaatccaagtttctctctct 37726001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 1417374 - 1417249
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    ||||||| |||||||||| || ||||||||||| ||| |||||||||||  | |||||||||  |  ||| ||||||||||||||||||||   ||| ||    
T  1417374 gatcctttcaatggtgaaatc-tcactacctaaagtgtttacaatgttt--cccaacccaagataacctcactacaaagacactcaaccctaaagttacc 1417278  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  ||||||| |||| || |||||||||    
T  1417277 tcctttgtaattcaagtttttctctctaa 1417249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 3323574 - 3323449
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||| ||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||| ||||||||||||||||   ||| ||    
T  3323574 gatcattccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactataaagacactcaaccctaaagttacc 3323478  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||||||| ||| || |||||||||    
T  3323477 tcctttgtaatcgaagtttgtctctctaa 3323449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 3328240 - 3328115
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    ||||||||||||| |||| || |||||||| |||||| ||||||||||||   ||||||||| ||  ||| ||||||||||| ||||||||   |||  |    
T  3328240 gatccttccaatgctgaaatc-tcactacccaaggtgtttacaatgtttt--ccaacccaagagaagctcactacaaagacattcaaccctaaagttatc 3328144  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  || ||||||||| ||||||||||||    
T  3328143 tcctttctaatccaagtttctctctctaa 3328115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 24694703 - 24694654
Alignment:
Q  390 tcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaata 438  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  24694703 tcgtatcacgatttctctgttcttccaaaaccacaaatttgaagccaata 24694654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 29812785 - 29812736
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||||||    
T  29812785 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 29812736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 47923371 - 47923326
Alignment:
Q  393 tgtcacgatttctctgttcttccagaccacaaatttgaagccaata 438  Q
    |||||||||||||||||| || || |||||||||||||||||||||    
T  47923371 tgtcacgatttctctgttttttcaaaccacaaatttgaagccaata 47923326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 6096264 - 6096316
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 352  Q
    |||||||||||| |||||||| |||||||||| ||| | ||||||||||||||    
T  6096264 aatcgtgtcacgttttcccaaaatcgtgtcacaattggacaccctgcaaacca 6096316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 8370096 - 8370044
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 352  Q
    |||||||||||| |||||||| |||||| |||||||  |||||||||||||||    
T  8370096 aatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaacca 8370044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 16264828 - 16264880
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 352  Q
    |||||||||||| |||||||| |||||| |||||||  |||||||||||||||    
T  16264828 aatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaacca 16264880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 46173238 - 46173186
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 352  Q
    |||||||||| | |||||||| |||||||||||||| | ||||||||||||||    
T  46173238 aatcgtgtcatgttttcccaaaatcgtgtcacgattggacaccctgcaaacca 46173186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 3393328 - 3393293
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatt 335  Q
    ||||||||||||||||||||| ||||||||||||||    
T  3393328 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 3393293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 22172957 - 22172902
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc 224  Q
    ||||||||||||  || ||||||| |||||||||||| ||||||| ||||||||||    
T  22172957 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcc 22172902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 4386840 - 4386773
Alignment:
Q  35 ctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccct 104  Q
    ||||||||  ||||||||||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||    
T  4386840 ctcactactcaaggtgattacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccct 4386773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 446
Target Start/End: Original strand, 24968630 - 24968706
Alignment:
Q  370 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 446  Q
    |||||||||||| ||||||| ||||| ||||||| || |||||||||| ||||| ||||||||| ||||  |||||||    
T  24968630 atcgtgtcacgattgccaaa-tcgtgacacgattcctttgttcttccaaaccactaatttgaagtcaattccaacagt 24968706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 44331893 - 44331942
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| ||| |||| |||||||||||||| | |||||||||||    
T  44331893 aatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgcaaa 44331942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 49200115 - 49200164
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| || ||||| |||||||||||||| | |||||||||||    
T  49200115 aatcgtgtcacgtttccccaacatcgtgtcacgattggacaccctgcaaa 49200164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 299; Significance: 1e-168; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 446
Target Start/End: Original strand, 24742133 - 24742579
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  24742133 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactca 24742232  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||  | |||||||||||||||||||  || ||||||| ||||||    
T  24742233 accctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctacaaatctgcacaagaacacaatatatactagtcttcct 24742332  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||| ||||||||||||||||||||||| |  |||||||||||| ||| || |||||||||||||||||||||||||||||||| ||||| |||||      
T  24742333 ctgaagaaatcgtgtcacgatttccagatcgtggcacgatttgcgtccgttcccaggtatgaccagtccttatcaaggatacttaacgagcaagtttctg 24742432  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| ||||  |||||||||||||||||||||| ||||||||||    
T  24742433 aatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacg 24742532  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaatatcaacagt 446  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24742533 atttctctgttcttccagaccacaaatttgaagccaatatcaacagt 24742579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 160 - 436
Target Start/End: Original strand, 13992593 - 13992870
Alignment:
Q  160 tccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggt 257  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||   ||||||||||||||||||||||| | ||||||||  | |||||||| ||||||    
T  13992593 tccaaatctgcacaagaacactt-aaatactagtcttccactgataaaatcgtgtcacgatttccagatcgtgtcacgattgatacgtacgtcacaaggt 13992691  T
Q  258 atgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctca 357  Q
    ||||||||||||||||| | | |||||| ||||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13992692 atgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctca 13992791  T
Q  358 cgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13992792 cgacatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 13992870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 1 - 436
Target Start/End: Complemental strand, 28468443 - 28467986
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| ||||||| |||||| ||||||||| ||  ||| ||||||||||||| ||    
T  28468443 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacacttaa 28468345  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttcc-aaatctgcacaagaacacttta--aatactagccttc 197  Q
    ||||   ||||||||  |||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||||| |  | |||||| ||||    
T  28468344 ccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaatctgcacaagaacacttaaatactactagtcttc 28468245  T
Q  198 ctctgaagcaatcg------------------tgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaagg 277  Q
    | ||||   |||||                  ||||||||||||||  || | ||||||||||  |||||||| ||||||| |||||||||||||||  |    
T  28468244 cactgataaaatcgtgtcacgatttaaaatcgtgtcacgatttccaagtcgtgtcacgatttgtacgtacgtcacaaggtacgaccagtccttatcatag 28468145  T
Q  278 atacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtc 377  Q
    | |||||| ||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||||     
T  28468144 aaacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtt 28468045  T
Q  378 acgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28468044 acgatgccaaattcgtgtcacgatttctctgttcttccataccacaaatttgaagccaa 28467986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 51520641 - 51521050
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  ||   ||||||| ||||||||||||||    
T  51520641 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctccttttctatccaag-ttctctctctaagc 51520739  T
Q  145 tcttccaagctctttt----cc-------aaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttt 232  Q
    || | |||||||| ||    ||       |||   ||||||||||||  || |||||||||||||||||||||||| ||| |||||||||| | ||| |     
T  51520740 tcattcaagctctcttaagtcctacttgtaaaaaagcacaagaacacaatatatactagccttcctctgaagcaattgtgccacgatttcccaaatcgtg 51520839  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    |||||||||||||  | ||||||||| || |||||||||||| |||||||||| ||||| |||||  |||||||||| ||||||||||||||||| ||||    
T  51520840 tcacgatttgcgtctgacccaaggta-gatcagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacg 51520938  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  ||||||||| |||||||| | || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51520939 atttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 51521038  T
Q  433 ccaatatcaaca 444  Q
    ||||||||||||    
T  51521039 ccaatatcaaca 51521050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 29760833 - 29761196
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgttttt-ctcaacccaagtgactctctctacaaagacactc 98  Q
    |||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||||||||| | ||||||||| ||| ||||||||||||||||||    
T  29760833 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaacccaagagacactctctacaaagacactc 29760932  T
Q  99 aaccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcc 198  Q
    |||||||||||||||||  |||||||||||| ||||| ||||||| |||||||||||| |  ||||||||||||||||||||  || ||||||| |||||    
T  29760933 aaccctttggttccctcctttgtaatccaagtttctcactctaagttcttccaagctc-tccccaaatctgcacaagaacacaatatatactagtcttcc 29761031  T
Q  199 tctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttca 298  Q
    ||||||| ||||||| |                   ||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||     
T  29761032 tctgaagaaatcgtgcc-------------------acgatttgcgtccgtaccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttct 29761112  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
     |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| ||||  ||||||||||||||||    
T  29761113 gaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 45 - 444
Target Start/End: Complemental strand, 9229095 - 9228686
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||| |  |||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  9229095 aaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 9228997  T
Q  145 tcttccaagctcttttc----------caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttt 232  Q
    || | |||||||| ||           ||||   ||||||||||||  || ||||||| |||||||||||| ||||||| ||||||||||  ||||| |     
T  9228996 tcatacaagctctcttaagattcacttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtg 9228897  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    ||||||| |||    | ||||||||| ||| |||||||||||  ||||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||    
T  9228896 tcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacg 9228798  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  ||||||||| |||||||| |  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9228797 atttggcgtcctgcaaacgagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9228698  T
Q  433 ccaatatcaaca 444  Q
    ||||||||||||    
T  9228697 ccaatatcaaca 9228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 45 - 445
Target Start/End: Complemental strand, 9224308 - 9223898
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||| |  |||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  9224308 aaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 9224210  T
Q  145 tcttccaagctcttttc----------caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttt 232  Q
    || | |||||||| ||           ||||   ||| ||||||||  || ||||||| |||||||||||| ||| ||| ||||||||||  ||||| |     
T  9224209 tcatacaagctctcttaagattcacttcaaaaaagcagaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttccctagatcgtg 9224110  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    ||||||| |||    | ||||||||| ||| |||||||||||  ||||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||    
T  9224109 tcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacg 9224011  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  ||||||||| |||||||| |  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9224010 atttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9223911  T
Q  433 ccaatatcaacag 445  Q
    |||||||||||||    
T  9223910 ccaatatcaacag 9223898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 169 - 444
Target Start/End: Complemental strand, 56141788 - 56141511
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| |||||||||||| ||||||| ||||||||||  ||||| | ||||||||||| |  | ||||||||| |||||||    
T  56141788 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgacccaaggta-gaccagt 56141690  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt-ggcaccctgcaaaccagctcacgacacca 365  Q
    |||||||| |||||||||| ||||| |||||  |||||||||||||||||||||||||||| |||||||| |||  ||||||||| |||||||||| ||     
T  56141689 ccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaaactagctcacgacccct 56141590  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
      ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56141589 ccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 56141511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 162 - 432
Target Start/End: Original strand, 31495618 - 31495889
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||| ||||| ||| ||||   |||||||||||||||||||| |  | ||||||||  ||||| |||||||||  |     
T  31495618 caaatctgcacaagaacactt-aaatattagccctccactgataaaatcgtgtcacgatttccaggttgtgtcacgattggtgcgttcgtcccaagaaac 31495716  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    ||||||||||||||| ||| |||||| ||||| ||||   ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  31495717 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacg 31495816  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
     || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31495817 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 31495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 170 - 444
Target Start/End: Original strand, 5732971 - 5733247
Alignment:
Q  170 cacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagtc 267  Q
    |||||||||||  || ||||||| | ||| |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| |||||||||    
T  5732971 cacaagaacacaatatatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagtc 5733069  T
Q  268 cttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagct-cacgacaccat 366  Q
    |||||||  |||||||||  |||| |||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||| |||||     
T  5733070 cttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccac 5733169  T
Q  367 gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  5733170 gaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 5733247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 162 - 445
Target Start/End: Complemental strand, 7122549 - 7122266
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  7122549 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 7122451  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||||||||||  |||||| |||||||||   |||||||| || ||||||||    
T  7122450 accagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacg 7122351  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
     || |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||    
T  7122350 gcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaactcaacag 7122266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 162 - 447
Target Start/End: Complemental strand, 8393263 - 8392979
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||||||||  ||||||||||||||||  | |||||||||||||||||| | ||| | ||||||| |||||||  ||||||  | |    
T  8393263 caaatctgcacaagaacacttta--tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaaag 8393166  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    |||||||||||||| |||||||||| ||||| |||||   ||||||||||||||| || | |||||| |||||||||   |||||||| || ||||||||    
T  8393165 accagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacg 8393066  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagtt 447  Q
     || |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  8393065 gcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacagtt 8392979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 169 - 444
Target Start/End: Original strand, 3814330 - 3814605
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| ||||| |||||| ||||||||||||||||||  ||||||| ||||||| |||    || |  |||| ||||||||    
T  3814330 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgtcacgatttccctagatcttgtcacgatctgcaacggttctcaggt-tgaccagt 3814428  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccat 366  Q
    ||||||||  |||||||||  |||| |||||  ||||||||||||||||||||| |||||| |||||||||||  | |||||||  ||| |||    | |    
T  3814429 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa-atcgtgacacgatttggcgtcttgcaaacttgcttacggtcactt 3814527  T
Q  367 gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3814528 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 3814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 8395472 - 8395191
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc-agatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||||||||  ||||||||||||||||  | |||||||||||||||||| | ||| | ||||||| |||||||  ||||||  | |    
T  8395472 caaatctgcacaagaacacttta--tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacg 8395375  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    |||||||||||||| |||||||||| ||||| |||||   || |||||||||||| || | ||||||  ||||||||   |||||||| || ||||||||    
T  8395374 accagtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttgcacccctgcaaccctagctcacg 8395275  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     || |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8395274 gcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 5135932 - 5135649
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt--ccagatcttttcacgatttgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| || |||||| |||||||||   |||||||||||||||||  ||| ||| | ||||||||||||| |||||||||| |     
T  5135932 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgtcca-atcgtgtcacgatttgcgtccgtcccaaggaac 5135835  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctca 357  Q
    |||| ||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| |||||| |||||||||   |||||||| || | ||||    
T  5135834 gaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactca 5135735  T
Q  358 cgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    || || |  ||||||| |||||||| ||||| ||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5135734 cggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 5138158 - 5137875
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt--ccagatcttttcacgatttgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| || |||||| |||||||||   |||||||||||||||||  ||| ||| | ||||||||||||| |||||||||| |     
T  5138158 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgtcca-atcgtgtcacgatttgcgtccgtcccaaggaac 5138061  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctca 357  Q
    |||| ||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| |||||| |||||||||   |||||||| || | ||||    
T  5138060 gaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactca 5137961  T
Q  358 cgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    || || |  ||||||| |||||||| ||||| ||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5137960 cggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 169 - 444
Target Start/End: Original strand, 18856033 - 18856309
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| ||||| |||||| ||||||| ||||||||||  ||||| | ||||||| |||    || || |||| ||||||||    
T  18856033 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcatgtcacgatctgcaacggttcccaggt-tgaccagt 18856131  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  ||||||||||||||||||||||||| || |||||||| ||| || ||||||  | |||||| ||||     
T  18856132 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctcacggcacc- 18856230  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18856231 tccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 45 - 405
Target Start/End: Complemental strand, 18712667 - 18712294
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    |||||||| |||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||  ||||    
T  18712667 aaggtgataacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctaaaagc 18712569  T
Q  145 tcttccaagctcttttc-------------caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatc 229  Q
    |||   ||| |||| ||             ||||   ||||||||||||  || ||||||| ||||| |||||| ||||||| |||||||| |  ||||     
T  18712568 tctcttaagttcttctcttaagtcttacttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgattttcctagatt 18712469  T
Q  230 ttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtc 329  Q
     | ||||||| | |    | |||||||| |||| |||||||||||  ||||||||| ||||| |||||  |||||||||||||||||||||||||||| |    
T  18712468 gtgtcacgatcttcaacggacccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcc 18712370  T
Q  330 acgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttct 405  Q
    ||||||||||  ||||||||| |||||||| |  | ||||||||||||||||||||||| ||||||||||||||||    
T  18712369 acgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttct 18712294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 3 - 436
Target Start/End: Complemental strand, 31985538 - 31985136
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| ||||||||| |||||||| |  |||||||| |||||| |||||||||||  | ||||||||| ||  |||  |||||| ||||||||||    
T  31985538 aggaagcttttgatccttcccatggtgaaatt-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcaatacaaaaacactcaacc 31985442  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctg 202  Q
    ||   ||||||||  |||||||||||| ||||||||||         |||||||  ||| |||||||||||||||||||| ||||||||| ||||  |||    
T  31985441 ctaaagttccctcctttgtaatccaagtttctctctctt--------caagctcacttcaaaatctgcacaagaacactt-aaatactagtcttcaactg 31985351  T
Q  203 aagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcaca 300  Q
    |   ||||||| ||||||||||| ||| | ||||||||  |||||||||| ||||||| ||||||||||||||  | | ||||||  |||| |||| | |    
T  31985350 ataaaatcgtgccacgatttccaaatcgtgtcacgattgatgcgtacgtcacaaggtacgaccagtccttatcctgaaaacttaaccagcaagtttgaaa 31985251  T
Q  301 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacga 400  Q
    ||||||||||||                     ||||||||||||| ||| ||||||||  | ||  |||||||||||||||||||||||||||||||||    
T  31985250 atcgtgtcacga---------------------tttggcaccctgctaactagctcacggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacga 31985172  T
Q  401 tttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||| |||| |||||||||||||||||    
T  31985171 tttctctgttctttcagatcacaaatttgaagccaa 31985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 45347593 - 45347324
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || |||||||  |||| |||||| ||||||| ||||||||||  ||||| | ||||||| |||    || || |||| ||||||||    
T  45347593 gcacaagaacacaatatatactagttttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggttcccaggt-tgaccagt 45347495  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||| || ||||||  | |||||| || |     
T  45347494 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcatc- 45347396  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |  |||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  45347395 tctaatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaat 45347324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 260 - 432
Target Start/End: Complemental strand, 7124673 - 7124501
Alignment:
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    |||||||||||||||||||||||||| ||||| |||||   |||||||||||||||||||  |||||| |||||||||   |||||||| || |||||||    
T  7124673 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 7124574  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    | || |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  7124573 ggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 369 - 444
Target Start/End: Original strand, 18860446 - 18860521
Alignment:
Q  369 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18860446 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 437
Target Start/End: Original strand, 5148157 - 5148294
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||| | |||| ||| |||||| ||||||| | |||||||||||| |||||||||||     ||||||||||||| ||  ||| ||||||||||    
T  5148157 aatcgtgtcaagttttcacaaaatcgtgccacgattggtcaccctgcaaactagctcacgacattgcaaaatcgtgtcacggtgataaaatcgtgtcacg 5148256  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  5148257 atttctctattcttccaaaccacaaatttgaagccaat 5148294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 439
Target Start/End: Complemental strand, 16628777 - 16628351
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||| ||||||||  |||| ||||||||| ||  ||| ||||||||||||||||||    
T  16628777 aggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaacc 16628681  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctct-tttccaaatctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   ||| ||||  ||| |||||||  ||||||||||    |||    ||||||  ||| ||||||| |||| ||||| ||| |||  ||||||| |||    
T  16628680 ctaaagttacctcctttgcaatccaattttctctctct----tct----agctctccttcaaaatctgaacaaaaacac-ttatatagcagccttcatct 16628590  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaag-gatacttaatgagcatgtttca 298  Q
    |    |||||||||||| |||||| ||| |  |||||||  |||||||| ||||||||| |||||  |||||||| |  | |  |||  |||| |||| |    
T  16628589 gtcaaaatcgtgtcacgttttccaaatcgtgacacgattggtgcgtacgacccaaggtacgacca-accttatcatgaaaaaagtaacaagcaagtttga 16628491  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtca 397  Q
     |||||||||||| |||||||| |||||| |||||||  |||||||||||| || ||||||    ||   |||||||| |||  ||   || ||||||||    
T  16628490 aaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaagcatgctcac--tgcctgaaaatcgtgacacattgatgaaatcgtgtca 16628393  T
Q  398 cgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  16628392 cgatttctctgttcttccaaaccacaaatttgaagccaatat 16628351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 16623198 - 16623064
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||    
T  16623198 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 16623102  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||| ||||  |||||||||||| ||||||||||    
T  16623101 ctaaagttacctcctttgtaatccaagtttctctctct 16623064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 169 - 350
Target Start/End: Complemental strand, 45357074 - 45356892
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| | ||| | |||| ||||||||||||||||||  ||||| | ||||||| |||    || || |||| ||||||||    
T  45357074 gcacaagaacacaatatatactagtcctccccagaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggttcccaggt-tgaccagt 45356976  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac 350  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||| || ||||||    
T  45356975 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaac 45356892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 390 - 444
Target Start/End: Original strand, 29761185 - 29761239
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29761185 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagcaaatatcaaca 29761239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 437
Target Start/End: Complemental strand, 6743033 - 6742896
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||| |||||||| | |||| ||||||| ||||||||| ||| |||||| ||||      |||||||| |||| ||   || ||||||||||    
T  6743033 aatcgtgtcacgttttcccaaaaacgtgccacgattaggcaccctgaaaaacagctctcgacgttgcaaaatcgtgacacgttgatgaaatcgtgtcacg 6742934  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  6742933 atttctctgttcttccaaaccataaatttgaagccaat 6742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 390 - 439
Target Start/End: Original strand, 3778118 - 3778167
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3778118 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 3778167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 8689097 - 8689044
Alignment:
Q  384 ccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 38151965 - 38151916
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38151965 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 38151916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 385 - 437
Target Start/End: Original strand, 5143807 - 5143859
Alignment:
Q  385 caaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5143859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 3777752 - 3777875
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||| ||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  3777752 gatcattccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacc 3777848  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  3777849 tcctttgtaatccaagtttctctctct 3777875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 5269094 - 5268971
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||| | |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  5269094 gatccttccaatggtgaaatc-tcactatccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacc 5268998  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  5268997 tcctttgtaatccaagtttctctctct 5268971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 5396573 - 5396442
Alignment:
Q  6 aagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctt 105  Q
    ||||||| ||| |||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||     
T  5396573 aagcttttgattcttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacccta 5396477  T
Q  106 tggttccctcaattgtaatccaagattctctctct 140  Q
      ||  ||||  |||||||||||| ||||||||||    
T  5396476 aagtaacctcctttgtaatccaagtttctctctct 5396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 10047584 - 10047707
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  |||  |||||||||||||||||||   ||| ||    
T  10047584 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcattacaaagacactcaaccctaaagttacc 10047680  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  10047681 tcctttgtaatccaagtttctctctct 10047707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 182
Target Start/End: Complemental strand, 38152342 - 38152174
Alignment:
Q  4 ggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccc 103  Q
    ||||||||| |||||||||||||||||| |  |||||||| |||||| ||||||| |||  | || |||||| ||  ||| |||||||||||||||||||    
T  38152342 ggaagcttttgatccttccaatggtgaattg-tcactacccaaggtgtttacaatattt--cccatcccaagagatcctcactacaaagacactcaaccc 38152246  T
Q  104 tttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactt 182  Q
    |   ||| ||||| ||||||||||| ||| |||||     ||||||| |||||||||| ||||||||||| ||||||||    
T  38152245 taaagttacctcatttgtaatccaa-attttctct-----ctcttcc-agctcttttcaaaatctgcacaggaacactt 38152174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 6743320 - 6743186
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||| ||| |||||||||||||||||| || ||| |||| |||||| |||||||||||  | ||||||||| ||  ||| |||||||||||||||| |    
T  6743320 aggaagtttttgatccttccaatggtgaaatc-tcattacccaaggtgtttacaatgttt--cccaacccaagagatcctcgctacaaagacactcaaac 6743224  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||| ||||  |||||||||||| ||||||||||    
T  6743223 ctcaagttacctcctttgtaatccaagtttctctctct 6743186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 36315135 - 36315001
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| ||||||||||||||| || || |||||||| || ||| |||||||||||  | ||||||||| ||  ||||||||||||||||| ||||    
T  36315135 aggaagcttttgatccttccaatggttaaatc-tcactacccaatgtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactaaacc 36315039  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||| ||||  |||||||||||| || |||||||    
T  36315038 ctaaagttacctcctttgtaatccaagtttatctctct 36315001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 36329344 - 36329210
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| ||||||||||||||| || || |||||||| || ||| |||||||||||  | ||||||||| ||  ||||||||||||||||| ||||    
T  36329344 aggaagcttttgatccttccaatggttaaatc-tcactacccaatgtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactaaacc 36329248  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||| ||||  |||||||||||| || |||||||    
T  36329247 ctaaagttacctcctttgtaatccaagtttatctctct 36329210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 16622821 - 16622772
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  16622821 tcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaatat 16622772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 25861927 - 25861802
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||  |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  25861927 gatccttccaatggtgaaatc-tcactactcaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacc 25861831  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    |   |||||||||||| ||||||||||||    
T  25861830 ttctttgtaatccaagtttctctctctaa 25861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 5268743 - 5268699
Alignment:
Q  393 tgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  5268743 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5268699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 10047935 - 10047983
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 438  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||    
T  10047935 tcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaata 10047983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 5143452 - 5143550
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||  |||||||||||||||||| | |||||||||||||||| |||||| |  |||| ||| ||||| ||  ||| ||||||||||||||||||    
T  5143452 aggaagcttatgatccttccaatggtgaaat-ctcactacctaaggtgtttacaaag--tttcccaatccaagagatcctcactacaaagacactcaacc 5143548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 54882544 - 54882492
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 352  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||||||||||    
T  54882544 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaacca 54882492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 8689401 - 8689270
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    ||||| |||| |||||||||||||||||| || |||||| | |||||| ||| |||||||  | ||||||||| ||  ||| ||||||||||||| ||||    
T  8689401 aggaaacttttgatccttccaatggtgaaatc-tcactatccaaggtgtttaaaatgttt--cccaacccaagagatcctcactacaaagacactaaacc 8689305  T
Q  103 ctttggttccctcaattgtaatccaagattctctc 137  Q
    ||   ||| ||||  |||||||||||| |||||||    
T  8689304 ctaaagttacctcctttgtaatccaagtttctctc 8689270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 54867748 - 54867795
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  54867748 tcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaat 54867795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 2209224 - 2209162
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| || ||||| |||||||||||||| ||||| ||||||| |||||| |||||    
T  2209224 aatcgtgtcacgtttccccaaaatcgtgtcacgattgggcactctgcaaaacagctctcgaca 2209162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 26176070 - 26176132
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| |||||||| || |||||||| || ||||||||||||| |||||| |||||    
T  26176070 aatcgtgtcacgttttcccaaaattgtgtcacggttgggcaccctgcaaaacagctctcgaca 26176132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 9194167 - 9194216
Alignment:
Q  390 tcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaata 438  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  9194167 tcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaata 9194216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 54867432 - 54867505
Alignment:
Q  67 caacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||||||||| || |||| ||||||||||||||||||||   ||| ||||  |||||||||||| ||||||||||    
T  54867432 caacccaagagattctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 54867505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 3778028 - 3778080
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 352  Q
    |||||||||||| |||||||| |||||| |||||||  |||||||||||||||    
T  3778028 aatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaacca 3778080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 5112440 - 5112523
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    |||||||||||||||||| || |||||||| |||||| ||||||||  |||| ||||||||| ||  ||| | ||||||||||||||    
T  5112440 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatg--tttcccaacccaagagaacctcacaacaaagacactcaa 5112523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 5370522 - 5370557
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatt 335  Q
    ||||||||||||||||||||| ||||||||||||||    
T  5370522 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 5370557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 36314758 - 36314715
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 433  Q
    |||||||||||||||||| |||||| | ||||||||||||||||    
T  36314758 tcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 36328967 - 36328924
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 433  Q
    |||||||||||||||||| |||||| | ||||||||||||||||    
T  36328967 tcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 12745863 - 12745921
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 358  Q
    |||||||||||| |||||||| ||| |||||||||| | |||||||| || ||||||||    
T  12745863 aatcgtgtcacgttttcccaaaatcatgtcacgattggacaccctgccaaacagctcac 12745921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 46570194 - 46570252
Alignment:
Q  304 gtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||| |||||||| ||| |||||||||| ||||||||||| | |||||| |||||    
T  46570194 gtgtcacgttttcccaaaatcttgtcacgattgggcaccctgcagaacagctctcgaca 46570252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 52095807 - 52095857
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac 350  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||| ||||    
T  52095807 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaac 52095857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 5396213 - 5396176
Alignment:
Q  396 cacgatttctctgttcttccagaccacaaatttgaagc 433  Q
    |||||||||||||||||| || ||||||||||||||||    
T  5396213 cacgatttctctgttctttcaaaccacaaatttgaagc 5396176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 5429402 - 5429353
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||| ||||| |||||||| |||||||||||||| | |||||||||||    
T  5429402 aatcgtatcacgttttcccaaaatcgtgtcacgattagacaccctgcaaa 5429353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 290; Significance: 1e-162; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 28 - 444
Target Start/End: Original strand, 2058189 - 2058604
Alignment:
Q  28 tgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatcca 127  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  2058189 tgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatcca 2058288  T
Q  128 agattctctctctaagctcttccaagctct-tttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccag 226  Q
    || ||||||||||||||||||||||||||| ||| |||||||||||||||||||  || |||||||||||||||||||||||||||| ||||||||||||    
T  2058289 ag-ttctctctctaagctcttccaagctctcttttcaaatctgcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttccag 2058387  T
Q  227 atcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgt 326  Q
    ||| | |||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||    
T  2058388 atcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 2058487  T
Q  327 gtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaat 426  Q
    | |||||||||||  ||||||||| |||||||| |||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2058488 gccacgatttggcgtcctgcaaactagctcacggcacc-tcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 2058586  T
Q  427 ttgaagccaatatcaaca 444  Q
    ||||||||||||||||||    
T  2058587 ttgaagccaatatcaaca 2058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 401
Target Start/End: Complemental strand, 1533347 - 1532947
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  1533347 agaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaa 1533248  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||    |||||||| ||||||||||| || |||||||||||||||    
T  1533247 ccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccctcaaatctgtacaagaacactatatatactagccttcctc 1533148  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcaca 300  Q
    ||||||||||||| ||||||||||||||| | |||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| | ||||||||    
T  1533147 tgaagcaatcgtgccacgatttccagatcgtgtcacgatttgtgtatgtcccaaggtataaccagtccttatcaaggatacttaacgagtaagtttcaca 1533048  T
Q  301 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacga 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||   ||||| |||||||||||||||||||||||||||    
T  1533047 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcacctcaaaatcatgtcacgatgccaaattcgtgtcacga 1532948  T
Q  401 t 401  Q
    |    
T  1532947 t 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 21646198 - 21646634
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    |||||||| |||||||||||||||||||||| || |||||||| |||||| |||||||||||||| ||||||||| ||  ||||||||||||||||||||    
T  21646198 agaggaagatttagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaa 21646296  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcct 199  Q
    ||||   ||| ||||  |||||||| ||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||    
T  21646297 ccctagagtttcctcctttgtaatctaagtttctctctctaagctcttccaagctcttccccaaaatctgcacaagaacactt-aaatactagccttcct 21646395  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
    ||||   ||||||||||||||||||||||| |  |||||||||  |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||     
T  21646396 ctgataaaatcgtgtcacgatttccagatcgtggcacgatttgaacgtacgtcccaaggtatgaccagttcttatcaaggatacttaacgagcaagtttg 21646495  T
Q  298 acaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtca 397  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||    
T  21646496 aaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtca 21646595  T
Q  398 cgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  21646596 cgatttctctgttcttccaaaccacaaatttgaagccaa 21646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 18413830 - 18414266
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||| ||||||||||||||||||| || |||||||| |||||| ||||| |||||||| ||||||||| ||  ||| ||||||||||||||||    
T  18413830 agaggaagcttaagatccttccaatggtgaaatc-tcactacccaaggtgtttacattgtttttcccaacccaagagatcctcactacaaagacactcaa 18413928  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcct 199  Q
    ||||   ||||||||  |||||||||||| |||||||||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||| |||||     
T  18413929 ccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaatctgcacaagaacactt-aaatactagtcttcca 18414027  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
     |||   ||| |||||||||||||||  || | |||||||| |  |||||||| ||||||| ||||||||||||||| ||| ||||||  |||| ||||     
T  18414028 atgataaaattgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacaagcaagtttg 18414127  T
Q  298 acaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtca 397  Q
    | |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  18414128 agaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacggcaccacaaaatcgtgccacgatgccaaattcgtgtca 18414227  T
Q  398 cgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  18414228 cgatttctctgttcttccagaccataaatttgaagccaa 18414266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 18408954 - 18409390
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||| ||||||||  ||||||||| || |||||||| |||||| |||||||||||||| ||||||||| ||  ||| ||||||||||||||||    
T  18408954 agaggaagcttaagatccttttaatggtgaaatc-tcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaa 18409052  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcct 199  Q
    ||||   ||||||||  |||||||| ||| |||||||||||||||||||||||||||  |||||| ||||||| ||||||||| ||||||||| |||||     
T  18409053 ccctagagttccctcctttgtaatctaagtttctctctctaagctcttccaagctctcctccaaaatctgcacgagaacactt-aaatactagtcttcca 18409151  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
    ||||   |||||||||||||||||||  || | |||||||| |  |||||||| ||||||| ||||||||||||||| ||| ||||||  |||| ||||     
T  18409152 ctgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacaagcaagtttg 18409251  T
Q  298 acaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtca 397  Q
    | ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |    
T  18409252 agaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacggcaccacaaaatcgtgtcacgatgccaaattcgtgtta 18409351  T
Q  398 cgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  18409352 cgatttctctgttcttccagaacacaaatttgaagccaa 18409390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 444
Target Start/End: Original strand, 21640000 - 21640423
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||||||||| ||||||||| ||  ||||||||||||||||||||    
T  21640000 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaa 21640098  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    ||||   ||||||||  |||||||||||| |||||||||||||||||||||||||||  | ||||   ||||||||||||  || ||||||| || | ||    
T  21640099 ccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaatagcacaagaacacaatatatactagtctccttc 21640198  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcaca 300  Q
    |||||||||||||||||                   ||||||||| ||| |||||| |||||||||||||||||  ||||||||||||||| |||||  |    
T  21640199 tgaagcaatcgtgtcac-------------------gatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctga 21640279  T
Q  301 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacga 400  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||| ||||  |||||||||||||||||||||| |||||||||||    
T  21640280 atcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacga 21640379  T
Q  401 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21640380 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 21640423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 168 - 432
Target Start/End: Complemental strand, 24789703 - 24789439
Alignment:
Q  168 tgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtc 267  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| | ||| |||||||||||  ||||||||||||||||||    
T  24789703 tgcacaagaacactttatatactagccttcctctgaagcaatcgtgtcacgatttccaaatcgtgtcaagatttgcgtacaacccaaggtatgaccagtc 24789604  T
Q  268 cttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatg 367  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| |    
T  24789603 cttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaactagctcacggcaccacg 24789504  T
Q  368 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24789503 aaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 24789439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 20357451 - 20357028
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||    
T  20357451 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactca 20357352  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||| ||||||| ||||||| ||||||||| |||||||||  | ||||   ||||||||||||  || ||||||| ||||||    
T  20357351 accctttggttccctcctttgttatccaag-ttctctcactaagctctaccaagctctccttcaaaaa-gcacaagaacacaatatatactagtcttcct 20357254  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||||||||||| |||||||                   |||||  | |||||||| ||||| ||||||||||||||||||||| ||||| |||||      
T  20357253 ctgaagcaatcgtgccacgatt-------------------tgcgtctgacccaaggtttgaccggtccttatcaaggatacttaacgagcaagtttctg 20357173  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||| ||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  20357172 aatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacg 20357073  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20357072 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 20357028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 4873312 - 4873721
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||| ||||||| ||||||||||||||    
T  4873312 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaag-ttctctctctaagc 4873410  T
Q  145 tcttccaagctcttttc----------caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttt 232  Q
    ||||||||||||| ||           ||||   ||||||||||||  || ||||||| |||||||||||| ||||||| ||||||||||  ||||| |     
T  4873411 tcttccaagctctcttaagttcttcttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtg 4873510  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    |||||||||||    | ||||||| | ||| |||||||||||  ||||||||| ||||| |||||  ||| |||||||||||||||||||||||| ||||    
T  4873511 tcacgatttgcaacggacccaaggaa-gacaagtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacg 4873609  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  ||||||||| | || ||| |  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4873610 atttggcgtcctgcaaactatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4873709  T
Q  433 ccaatatcaaca 444  Q
    ||||||||||||    
T  4873710 ccaatatcaaca 4873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 208 - 436
Target Start/End: Complemental strand, 39731172 - 39730942
Alignment:
Q  208 atcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgt 305  Q
    |||||||||||||||||||||| | |||||||| |  |||||||||||||||| ||||||||||||||| ||| |||||| ||||| ||||   ||||||    
T  39731172 atcgtgtcacgatttccagatcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgt 39731073  T
Q  306 gtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttct 405  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||||||||||||||||||||||    
T  39731072 gtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttct 39730973  T
Q  406 ctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||||||||||||||||||    
T  39730972 ctgttcttccagaccacaaatttgaagccaa 39730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 248 - 433
Target Start/End: Original strand, 43504524 - 43504709
Alignment:
Q  248 gtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgca 347  Q
    ||||||||||| ||||||||||||||| ||| |||||| ||||| ||||   |||||||||||||||||||| |||||||||||||||||||||||||||    
T  43504524 gtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgca 43504623  T
Q  348 aaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 433  Q
    |||||||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43504624 aaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagc 43504709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 160 - 445
Target Start/End: Original strand, 18392496 - 18392781
Alignment:
Q  160 tccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggta 258  Q
    ||||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| |    
T  18392496 tccaaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaa 18392594  T
Q  259 tgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctca 357  Q
     |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||||||||| || ||||||||||| || ||||||    
T  18392595 cgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctca 18392694  T
Q  358 cgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
    || |||| |  |||||||||||||| ||||| ||||| ||||||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  18392695 cggcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacag 18392781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 186 - 444
Target Start/End: Original strand, 12406598 - 12406857
Alignment:
Q  186 atactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatactt 283  Q
    ||||||| |||||||||||| ||||||| ||||||||||  | ||| | |||||||||||    | ||||||||| ||| |||||||||||  |||||||    
T  12406598 atactagtcttcctctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatactt 12406696  T
Q  284 aatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatg 383  Q
    || ||||| |||||  |||||||||||||||||||||||||||| |||||||||||  | ||||||| |||||||| |  | ||||||||||||||||||    
T  12406697 aacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaactagctcacggccacttgaaatcgtgtcacgatg 12406796  T
Q  384 ccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406797 ccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 12406857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 47 - 444
Target Start/End: Complemental strand, 24024226 - 24023819
Alignment:
Q  47 ggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagctc 146  Q
    |||||||||||||||||||  |||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||| ||||||    
T  24024226 ggtgattacaatgtttttccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctcaaagctc 24024128  T
Q  147 ttccaagctcttt------------tccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttt 232  Q
     | |||||||| |            | ||||   ||||||||||||| ||  |||||| ||||| |||||| ||||||| ||||||||||  ||||| |     
T  24024127 atacaagctctctcttatgtcttacttcaaaaaagcacaagaacactata--tactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtg 24024030  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    ||||||| |||    ||||| |||| ||||||||||||||||  ||||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||    
T  24024029 tcacgatctgcaacggtccccaggt-tgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacg 24023931  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  ||||||||| ||||| |  |  | |||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  24023930 atttggcgtcctgcaaactagctctctgccacttgaaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24023831  T
Q  433 ccaatatcaaca 444  Q
    | ||||||||||    
T  24023830 ctaatatcaaca 24023819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 163 - 453
Target Start/End: Original strand, 25767263 - 25767549
Alignment:
Q  163 aaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatg 260  Q
    |||||||||||||||||||| ||||||||| |||||  |||   |||||||||||||||||||  || | |||||||| |  |||||||| ||||| | |    
T  25767263 aaatctgcacaagaacactt-aaatactagtcttccattgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggcacg 25767361  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||| |||||||||   || |||||| ||||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  25767362 acctgtccttatcctagaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgg 25767461  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaacagtttgtgaa 453  Q
    || || |||||||||||||||||||||||| ||||||||||||||      ||||||||||||||||||||||| |||||||||| | ||||||    
T  25767462 catcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttct------ttccagaccacaaatttgaagccaaatatcaacaatatgtgaa 25767549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 243 - 436
Target Start/End: Complemental strand, 48408600 - 48408407
Alignment:
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 342  Q
    |||||||  ||||||| ||||||||||||||   || |||||| ||||| ||||   ||||||||||||||||| |||||||||||||||||||||||||    
T  48408600 cgtacgttacaaggtacgaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcacc 48408501  T
Q  343 ctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48408500 ctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 48408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 162 - 444
Target Start/End: Original strand, 6592639 - 6592921
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  6592639 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 6592737  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| |||||   ||||||||||||||| || | |||||| |||||||||   |||||||| || ||||||||    
T  6592738 accagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacg 6592837  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     || |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6592838 gcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 144 - 444
Target Start/End: Original strand, 6594838 - 6595137
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttg 242  Q
    ||||||||| |||| ||| |||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||    
T  6594838 ctcttccaacctctcttc-aaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttg 6594935  T
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 342  Q
    ||| |||||||||| | |||||||||||||||||||||||||| ||||| |||||   ||||||||||||||| || | |||||| |||||||||   ||    
T  6594936 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcaccc 6595035  T
Q  343 ctgcaaacc-agctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 441  Q
    |||||| || |||||||| || |  |||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||| |||| |||    
T  6595036 ctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagacaatctca 6595134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 3 - 436
Target Start/End: Original strand, 2479528 - 2479951
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||| ||||||||||||||    
T  2479528 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactataaagacactcaacc 2479624  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   ||||||||  |||||||||||| ||||||||||         ||||||||| |||||| ||||||||||||||||| | ||||||| ||||  ||    
T  2479625 ctaaagttccctcctttgtaatccaagtttctctctctt--------caagctcttctccaaaatctgcacaagaacactt-atatactagtcttcaact 2479715  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||   ||||||| |||| |||||| ||| |  || ||||  |||||||| ||||||||| |||||  |||||||  | | ||||||  | || |||| |     
T  2479716 gataaaatcgtgccacgttttccaaatcatgccatgattgatgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccaacaagtttgaa 2479814  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||| |||||||| ||| |||||| ||||||||| ||||||||||||||||||||| ||  |  ||||||||||||||||||||| |||||||||     
T  2479815 aatcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacggcattagaaaatcgtgtcacgatgccaaaatcgtgtcaca 2479914  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||| || |||||||||||||||||||    
T  2479915 atttctctgttcttacaaaccacaaatttgaagccaa 2479951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 12397095 - 12397492
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  12397095 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 12397193  T
Q  145 tcttccaagctctttt-----------ccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatctt 231  Q
    || | |||||||| ||           | |||   ||||||||||||  || |||||||  ||||||||||| ||||||| ||||||||||  | ||| |    
T  12397194 tcatacaagctctcttaagttcttcttcaaaaaaggcacaagaacacaatatatactagtattcctctgaagaaatcgtgccacgatttccccaaatcgt 12397293  T
Q  232 ttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcac 331  Q
     |||||||||||    | ||||||||| ||| |||||||||||  ||||||||| ||||| |||||  ||||||||||||||||||||||||| || |      
T  12397294 gtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcatggc-- 12397390  T
Q  332 gatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaa 431  Q
               |||||||| |||||||| |  | ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12397391 -----------ctgcaaactagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaa 12397479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 233 - 447
Target Start/End: Complemental strand, 20343711 - 20343497
Alignment:
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    ||||||| |||||||  ||||||  | |||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||  |||||| ||||    
T  20343711 tcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacg 20343612  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||| ||| || |||| | |||||||| ||||  |||||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||||||||||    
T  20343611 attttgcatccggcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaag 20343512  T
Q  433 ccaatatcaacagtt 447  Q
     |||| |||||||||    
T  20343511 acaatctcaacagtt 20343497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 45 - 444
Target Start/End: Complemental strand, 31109485 - 31109070
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctt-tggttccctcaattgtaatccaagattctctctct-aa 142  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| | ||||||||||  |||  ||||||| || ||||||| ||    
T  31109485 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatatggttccctcctttgctatccaagtttttctctcttaa 31109386  T
Q  143 gctcttccaagctcttt------------tccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agat 228  Q
    |||| | |||||||| |            | ||||   ||||||||||||  || ||||||| |||||||||||| ||||||| ||||||||||  ||||    
T  31109385 gctcatacaagctctctcttaagtttatcttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagat 31109286  T
Q  229 cttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgt 328  Q
    | | ||||||| |||    | ||||||| | ||| |||||||||||   ||||||||  |||| |||||  ||||||||||||||||||||||||||||     
T  31109285 cgtgtcacgatctgcaacggccccaaggca-gacaagtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgc 31109187  T
Q  329 cacgatttggcaccctgcaaacc-agctcac-gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaat 426  Q
    |||||||||||  |||||||||  |||| || | |||  |||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  31109186 cacgatttggcgtcctgcaaacttagcttacaggcact-tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaat 31109088  T
Q  427 ttgaagccaatatcaaca 444  Q
    ||||||||||| ||||||    
T  31109087 ttgaagccaatttcaaca 31109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 162 - 444
Target Start/End: Original strand, 1562305 - 1562587
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||| | ||||||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||| ||||| | |    
T  1562305 caaatctgcacaagaacacat-aaatactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcacaaggaacg 1562403  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| |||| |||||| ||||||||   ||||   |||| |    |       
T  1562404 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgatttaaaacccaaaaaacaaaaaaaaag 1562503  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     | || |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1562504 aaacacgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 233 - 444
Target Start/End: Original strand, 32060677 - 32060888
Alignment:
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||| |||||   ||||||||||||||| || | |||||| ||||    
T  32060677 tcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacg 32060776  T
Q  333 atttggcaccctgcaaacc-agctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaa 431  Q
    |||||   |||||||| || |||||||| || |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  32060777 atttgcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 32060875  T
Q  432 gccaatatcaaca 444  Q
    | |||| ||||||    
T  32060876 gacaatctcaaca 32060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 160 - 346
Target Start/End: Original strand, 18389060 - 18389246
Alignment:
Q  160 tccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggta 258  Q
    ||||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| |    
T  18389060 tccaaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaa 18389158  T
Q  259 tgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgc 346  Q
     |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || | |||||||||||| || |||||||||    
T  18389159 cgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgc 18389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 259 - 436
Target Start/End: Complemental strand, 21811924 - 21811747
Alignment:
Q  259 tgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 357  Q
    ||||||||||||||||  |||||||||  |||| |||||   ||||||||||||||||||||||||||| |||||||| |||||||||||||   |||||    
T  21811924 tgaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctca 21811825  T
Q  358 cgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    || || | | | |||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  21811824 cggcatc-tcagatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 21811747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 300 - 436
Target Start/End: Original strand, 47264122 - 47264258
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    ||||||||||||||||| ||  || ||| ||||||||| |||||| |||||||||||||||||  |  ||||||||||||||||||||| ||||||||||    
T  47264122 aatcgtgtcacgatttcacacaattgtgccacgatttgacaccctacaaaccagctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacg 47264221  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||| |||||||| |||||||||||||||||||    
T  47264222 atttctctattcttccaaaccacaaatttgaagccaa 47264258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 1532958 - 1532884
Alignment:
Q  371 tcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1532958 tcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaaca 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 300 - 437
Target Start/End: Original strand, 21983722 - 21983859
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||| |||| ||| ||| || | ||||| | ||||||||||||||||||||||||     ||||||||||||||||   || ||||||||||    
T  21983722 aatcgtgtcacgttttcacaaaatcatgccgcgattggtcaccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcgtgtcacg 21983821  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  21983822 atttctctgttcttccaaaccacaaatttgaagccaat 21983859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 329 - 436
Target Start/End: Complemental strand, 44847735 - 44847628
Alignment:
Q  329 cacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaattt 428  Q
    |||||| || || |||||||||||||||||||||  |  ||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  44847735 cacgatctgacatcctgcaaaccagctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaattt 44847636  T
Q  429 gaagccaa 436  Q
    ||||||||    
T  44847635 gaagccaa 44847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 16880384 - 16880653
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | | |||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  16880384 gcacaagaacactttaaatactagtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 16880482  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcac-gacacc 364  Q
    ||||||||  || ||||||  |||| |||||  ||||||||||| |||||||||||||||| |||||||| ||  || |||||| | |||||| | | ||    
T  16880483 ccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctcc 16880582  T
Q  365 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
     ||  |||||||||||||| |||| ||||| ||||||| ||||| ||||||| ||||| ||||||||| ||||    
T  16880583 ctg--atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaat 16880653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 16885239 - 16885508
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | | |||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  16885239 gcacaagaacactttaaatactagtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 16885337  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcac-gacacc 364  Q
    ||||||||  || ||||||  |||| |||||  ||||||||||| |||||||||||||||| |||||||| ||  || |||||| | |||||| | | ||    
T  16885338 ccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctcc 16885437  T
Q  365 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
     ||  |||||||||||||| |||| ||||| ||||||| ||||| ||||||| ||||| ||||||||| ||||    
T  16885438 ctg--atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaat 16885508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 300 - 436
Target Start/End: Original strand, 21989387 - 21989522
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||| |||| ||| |||||| ||||||| | | ||||||||||||||||||||||     ||||||||||||||||   || || |||||||    
T  21989387 aatcgtgtcacg-tttcacaaaatcgtgccacgattggtcgccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcttgtcacg 21989485  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||| |||||||||||||||||||    
T  21989486 atttctctgttcttccaaaccacaaatttgaagccaa 21989522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 24265953 - 24265684
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | |   |||| | ||||||| ||||||||||  ||||| | ||||||| |||    ||||| | || ||||||||    
T  24265953 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagt-tgaccagt 24265855  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac-gacacc 364  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||  ||||||| | | ||    
T  24265854 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctcc 24265755  T
Q  365 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
     ||  ||||||||||||   |||| ||||| ||||||| ||||||||| ||| ||||| ||||||||| ||||    
T  24265754 ctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 24265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 12406515 - 12406585
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctc 115  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||    
T  12406515 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctc 12406585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 169 - 336
Target Start/End: Complemental strand, 24261097 - 24260929
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | |   |||| | ||||||| ||||||||||  ||||| | ||||||||| |    ||||  | || ||||||||    
T  24261097 gcacaagaacactttaaatactagtcctgtcctgatgaaatcgtgccacgatttccctagatcgtgtcacgattttcaacggtcctcaagt-tgaccagt 24260999  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 336  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||||||||||||    
T  24260998 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 24260929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 46516199 - 46516070
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | |||| |||| ||  ||| ||||||||||||||||||||   ||| ||    
T  46516199 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaactcaagagatcctcactacaaagacactcaaccctaaagttacc 46516103  T
Q  114 tcaattgtaatccaagattctctctctaagctc 146  Q
    ||  |||||||||||| ||||||||||||||||    
T  46516102 tcctttgtaatccaagtttctctctctaagctc 46516070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 47263858 - 47263992
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||  ||||||||  |||| ||||| ||| || |||| ||||||||||||||||||    
T  47263858 aggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtatttacaatg--tttcccaaccgaagagattctcactacaaagacactcaacc 47263954  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||| ||||  || ||||||||| ||||||||||    
T  47263955 ctaaagttacctcctttataatccaagtttctctctct 47263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 20284292 - 20284415
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  20284292 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacc 20284388  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  || ||||||||| ||||||||||    
T  20284389 tcctttataatccaagtttctctctct 20284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 23402907 - 23402784
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||| ||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  23402907 gatcattccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacc 23402811  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  23402810 tcctttgtaatccaagtttctctctct 23402784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 439
Target Start/End: Original strand, 79958 - 80007
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 439  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  79958 tcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaatat 80007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 370 - 446
Target Start/End: Complemental strand, 24260895 - 24260819
Alignment:
Q  370 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 446  Q
    |||||||||||||| | || ||||| ||||||| ||||||||| ||| ||||||||||||||||||||  |||||||    
T  24260895 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattccaacagt 24260819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 21989100 - 21989231
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||  ||||||||||||||| || || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| |||||||||||||||| |    
T  21989100 aggaagcttatgatccttccaatggtaaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaac 21989196  T
Q  103 ctttggttccctcaattgtaatccaagattctctc 137  Q
    ||   ||| ||||  |||||||||||| |||||||    
T  21989197 ctaaagttacctcctttgtaatccaagtttctctc 21989231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 4178496 - 4178434
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    ||||||||||||||||||||| |||||||||||||| | | ||||| |||||||||| |||||    
T  4178496 aatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaccagctctcgaca 4178434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 2647591 - 2647466
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||| ||||||  | ||||||||| ||  ||| ||||||||||||||||||||   |||  |    
T  2647591 gatccttccaatggtgaaatc-tcactacccaaggtgcttaccatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttatc 2647495  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  ||||| |||||| ||||||||||||    
T  2647494 tcctttgtagtccaagtttctctctctaa 2647466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 4796562 - 4796477
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||||||||||| || |||||||| |||||| ||||||||||||   ||||||||| ||  ||| ||||||||||||||||||    
T  4796562 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaacc 4796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 304 - 387
Target Start/End: Original strand, 2361608 - 2361691
Alignment:
Q  304 gtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaa 387  Q
    |||||||| || ||||| ||||||||||||||||||| ||| |||| |||||| |||||   | ||||||||||||||| ||||    
T  2361608 gtgtcacgtttccccaaaatcgtgtcacgatttggcatcctacaaaacagctctcgacattgtaaaatcgtgtcacgattccaa 2361691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 33332344 - 33332221
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| ||| || |||||||||||  ||||||||||| ||  ||  ||||||| ||||||||||||   ||| ||    
T  33332344 gatccttccaatggtgaaatc-tcactacccaagatgtttacaatgttt--ctcaacccaagagaaccttactacaaaaacactcaaccctaaagttacc 33332248  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| |||| |||||    
T  33332247 tcctttgtaatccaagtttctatctct 33332221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 44848015 - 44847896
Alignment:
Q  18 cttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaa 117  Q
    |||||||||||||| || |||||| | |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||||      
T  44848015 cttccaatggtgaaatc-tcactatccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcct 44847919  T
Q  118 ttgtaatccaagattctctctct 140  Q
    || ||||||||| ||||||||||    
T  44847918 ttataatccaagtttctctctct 44847896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 6360576 - 6360638
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| || ||||| |||||||||| ||| ||||||||||||| |||||| |||||    
T  6360576 aatcgtgtcacgtttccccaaaatcgtgtcacaattgggcaccctgcaaaacagctctcgaca 6360638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 2580593 - 2580717
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    ||||||| |||||||||| || |||||||| |||||| |||||||||||| |  |||||||| ||  ||| | ||||||||||||||||||   ||| ||    
T  2580593 gatcctttcaatggtgaaatc-tcactacccaaggtgtttacaatgttttcc--aacccaagagaacctcac-acaaagacactcaaccctaaagttacc 2580688  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  ||| |||||||| ||||||||||||    
T  2580689 tcctttgcaatccaagtttctctctctaa 2580717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 4538997 - 4539046
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| |||||||| |||||||||||||| |||||||| ||||    
T  4538997 aatcgtgtcacgttttcccaaaatcgtgtcacgattaggcacccttcaaa 4539046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 47674389 - 47674438
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||||||    
T  47674389 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 47674438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 47676582 - 47676631
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||||||    
T  47676582 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 47676631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 35961020 - 35961067
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgttt 62  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||    
T  35961020 gatccttccaatggtgaaatc-tcactacctaaggtgtttacaatgttt 35961067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 46515857 - 46515809
Alignment:
Q  390 tcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaat 437  Q
    |||||||||||||||||||||||||| | |||| |||||||||||||||    
T  46515857 tcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaat 46515809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 48408672 - 48408605
Alignment:
Q  153 gctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatt 221  Q
    ||||| ||| |||||||||||||||||| ||||||||||| ||||| ||||   |||||||||||||||    
T  48408672 gctctcttcaaaatctgcacaagaacac-ttaaatactagtcttccactgataaaatcgtgtcacgatt 48408605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 9185068 - 9184981
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccct 104  Q
    |||||||||||||||||| || |||||||| |||||| ||||||||  |||| ||||||||| ||  ||  ||||||||| ||||||||||    
T  9185068 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatg--tttcccaacccaagagaaccttactacaaagatactcaaccct 9184981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 21983478 - 21983536
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgttt 62  Q
    |||||||||  |||||||||||||||||| | ||||||||| |||||| |||||||||||    
T  21983478 aggaagcttatgatccttccaatggtgaaat-ctcactacccaaggtgtttacaatgttt 21983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 4796287 - 4796225
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| ||| |||| ||||||||||||||  |||||||||||| || ||| |||||    
T  4796287 aatcgtgtcacgtttttccaaaatcgtgtcacgattgagcaccctgcaaaacaactctcgaca 4796225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 9189901 - 9189775
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaag-acactcaaccctttggttcc 112  Q
    |||||||||||||||||| || |||||||| |||||| ||||||||  |||| ||||||||| ||  ||  |||||||| ||||||||||||   |||      
T  9189901 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatg--tttcccaacccaagagaaccttactacaaagaacactcaaccctaaagttat 9189805  T
Q  113 ctcaattgtaatccaagattctctctctaa 142  Q
    |||  ||| |||||||| ||||||||||||    
T  9189804 ctcctttgcaatccaagtttctctctctaa 9189775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 390 - 444
Target Start/End: Original strand, 18390508 - 18390562
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||| ||||||||| ||||||||| | ||||||||||||||| |||| ||||||    
T  18390508 tcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 23554761 - 23554711
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac 350  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||| ||||    
T  23554761 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaac 23554711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 39731253 - 39731201
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcc 198  Q
    ||||||||| |||| ||| |||||||||||||||||||| |||||||||||||||    
T  39731253 ctcttccaa-ctctcttcaaaatctgcacaagaacactt-aaatactagccttcc 39731201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 48599942 - 48600004
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| || ||||  ||||||||||||||  |||||||||||| |||||| |||||    
T  48599942 aatcgtgtcacgtttccccataatcgtgtcacgattgtgcaccctgcaaaacagctctcgaca 48600004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 49092241 - 49092282
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaa 431  Q
    ||||||||| ||||||||||||||||| || |||||||||||    
T  49092241 tcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 447
Target Start/End: Complemental strand, 1261859 - 1261411
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  1261859 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaa 1261761  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    ||||   ||||||||  |||||||||||| |||||||||||||||||||||||||||  | ||||   ||||||||||||||||||||||||||||||||    
T  1261760 ccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaagcacaagaacactttaaatactagccttcctc 1261661  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttca 298  Q
    |||   ||||||||||||||||||||||| | ||||||||||  |||| |||||||||||||||||||||||||||||||||||||| ||||| |||| |    
T  1261660 tgataaaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtatgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttga 1261561  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||||||||||||||||||||| |    
T  1261560 aaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcgc 1261461  T
Q  399 gatttctctgttcttccagaccacaaatttgaagcc-aatatcaacagtt 447  Q
    ||||||| |||||||||| |||||||||||||| || |||||||||||||    
T  1261460 gatttctgtgttcttccaaaccacaaatttgaaaccaaatatcaacagtt 1261411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 4759979 - 4759534
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgttttt-ctcaacccaagtgactctctctacaaagacactc 98  Q
    |||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  4759979 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaacccaagagactctctctacaaagacactc 4759880  T
Q  99 aaccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcc 198  Q
    |||||||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||  | ||||   ||||||||||||  || ||||||| |||||    
T  4759879 aaccctttggttacctcctttgcaatccaagattctctctctaagctcttccaagctctccttcaaacaagcacaagaacacaatatatactagtcttcc 4759780  T
Q  199 tctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttca 298  Q
    ||||||| ||||||||||||||||||||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||     
T  4759779 tctgaagaaatcgtgtcacgatttccagatcgtgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttct 4759680  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
     |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| ||||  ||||||||||||||||| |||| |||||||||    
T  4759679 aaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtcac 4759580  T
Q  399 gatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4759579 gatttctctgttcttccagaccacaaatttgaagccaatatcaaca 4759534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 446
Target Start/End: Original strand, 36979570 - 36980016
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||| | ||||| ||| ||| |||||||||||||||||||    
T  36979570 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttcc-caacctaagagacactctctacaaagacactca 36979668  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctg--cacaagaacactttaaatactagccttc 197  Q
    |||||||||||||||   |||||||||||| |||||||||||||||||||||||||||| ||||||   |  ||||||||||||| ||||||||||||||    
T  36979669 accctttggttcccttctttgtaatccaagtttctctctctaagctcttccaagctcttctccaaaaaagaacacaagaacactt-aaatactagccttc 36979767  T
Q  198 ctctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||||||  |||||||||||||||||||||||||  ||||||||| ||||| |||||    
T  36979768 ctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcagagatacttaacgagcaagtttc 36979867  T
Q  298 acaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtca 397  Q
      |||||||||||||||| ||||||||||| |||||||||||  ||||||||| |||||||| ||||  |||||||||||||||||||||| ||||||||    
T  36979868 tgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtca 36979967  T
Q  398 cgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 446  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979968 cgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 36980016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 444
Target Start/End: Original strand, 30655839 - 30656282
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||    
T  30655839 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactca 30655938  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||| ||||||| |||||||| ||||||||||||||||||  | ||||    |||||||||||  || ||||||| ||||||    
T  30655939 accctttggttccctcctttgttatccaag-ttctctctttaagctcttccaagctctccttcaaaaaaacacaagaacacaatatatactagtcttcct 30656037  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||  | |||||||| ||||||||||||||||||||||||||| ||||| |||||      
T  30656038 ctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctg 30656137  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  30656138 aatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacg 30656237  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30656238 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 30656282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 1 - 445
Target Start/End: Complemental strand, 18853071 - 18852626
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||| |||||| ||||||||| ||| ||||| |||||||||||||    
T  18853071 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatatttttcccaacccaagagacactctcaacaaagacactca 18852972  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||| ||||||| |||||||||||||||||||||||||||  | ||||   ||||||||||||  || ||||||| ||||||    
T  18852971 accctttggttccctcctttgttatccaagtttctctctctaagctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagtcttcct 18852872  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||||||||||| ||||||||||| ||| | ||||||| |||||  | |||||||||||||||||||||||||  ||||||||| ||||| |||||      
T  18852871 ctgaagcaatcgtgccacgatttccaaatcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctg 18852772  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| |||| ||||||||||||||||||||||| |||| |||||    
T  18852771 aatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacg 18852672  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18852671 atttctctgttcttccagaccacaaatttgaagccaatatcaacag 18852626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 18870465 - 18870021
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||    
T  18870465 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactca 18870366  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||| ||||| | |||||||||||||||||||||||||||  | ||||   ||||||||||||  || ||||||| ||| ||    
T  18870365 accctttggttccctcctttgttatccatgtttctctctctaagctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagtctttct 18870266  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||||||||||| |||||||| || ||| | ||||||| |||||  | ||||||||||||||||||||||| |  ||||||||| ||||| |||||      
T  18870265 ctgaagcaatcgtgccacgattttcaaatcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctg 18870166  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  18870165 aatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacg 18870066  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18870065 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 18870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 33037712 - 33037287
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||    
T  33037712 agaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacgaagacactca 33037613  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||  | ||||   ||||||||||||  || ||||||| || | |    
T  33037612 accctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagtctcctt 33037513  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||||||||||||||||||                   |||||| ||| |||||| |||||||||||||||||  ||||||||||||||| |||||      
T  33037512 ctgaagcaatcgtgtcacgat-------------------ttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctg 33037432  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||| ||||  |||||||||||||||||||||| ||||||||||    
T  33037431 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacg 33037332  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33037331 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 33037287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 448
Target Start/End: Original strand, 6311491 - 6311939
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||| ||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||    
T  6311491 agaggaagcttttgatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactca 6311590  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||  ||||||| |||| |||||||||||||||||||||| |  ||||   ||||||||||||  || ||||||| ||||||    
T  6311591 accctttggttccctcctttgctatccaag-ttctatctctaagctcttccaagctctctctcaaaaaagcacaagaacacaatatatactagtcttcct 6311689  T
Q  200 ctgaagcaatcgtgtcacgatttccag--atcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
    |||||| ||| ||| ||||||||||    ||| | ||||||||||| |  | |||||||| |||| ||||||||| |  ||||||||| ||||| |||||    
T  6311690 ctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggt-tgacaagtccttattagtgatacttaacgagcaagtttc 6311788  T
Q  298 acaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtca 397  Q
      |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||    
T  6311789 tgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtca 6311888  T
Q  398 cgatttctctgttcttccagaccacaaatttgaagccaatatcaacagttt 448  Q
     |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6311889 tgatttctctgttcttccagaccacaaatttgaagccaataacaacagttt 6311939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 432
Target Start/End: Original strand, 26288082 - 26288504
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||||||||| |||| |||| || |||||||||||||||| ||||    
T  26288082 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaa 26288180  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    ||||   |||||| |  |||||||||||| |||||||||||||||||||         | | |||||||||||||||||||| ||||||||||||||| |    
T  26288181 ccctagagttcccccctttgtaatccaagtttctctctctaagctcttc---------tccaaaatctgcacaagaacactt-aaatactagccttccac 26288270  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttca 298  Q
    |||   |||||||||||||||||||| || |  ||| ||| |  |||||||| ||||||| ||||||||||||||| ||| |||||| ||||| |||| |    
T  26288271 tgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttga 26288370  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
     ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||  ||||| |||||||||||||||||||||||||    
T  26288371 aaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcac 26288470  T
Q  399 gatttctctgttcttccagaccacaaatttgaag 432  Q
    ||||||||||||||||||||||||||||||||||    
T  26288471 gatttctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 432
Target Start/End: Original strand, 26301339 - 26301761
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||||||||| |||| |||| || |||||||||||||||| ||||    
T  26301339 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaa 26301437  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    ||||   |||||| |  |||||||||||| |||||||||||||||||||         | | |||||||||||||||||||| ||||||||||||||| |    
T  26301438 ccctagagttcccccctttgtaatccaagtttctctctctaagctcttc---------tccaaaatctgcacaagaacactt-aaatactagccttccac 26301527  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttca 298  Q
    |||   |||||||||||||||||||| || |  ||| ||| |  |||||||| ||||||| ||||||||||||||| ||| |||||| ||||| |||| |    
T  26301528 tgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttga 26301627  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
     ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||  ||||| |||||||||||||||||||||||||    
T  26301628 aaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcac 26301727  T
Q  399 gatttctctgttcttccagaccacaaatttgaag 432  Q
    ||||||||||||||||||||||||||||||||||    
T  26301728 gatttctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 432
Target Start/End: Original strand, 26313333 - 26313755
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||||||||| |||| |||| || |||||||||||||||| ||||    
T  26313333 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaa 26313431  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    ||||   |||||| |  |||||||||||| |||||||||||||||||||         | | |||||||||||||||||||| ||||||||||||||| |    
T  26313432 ccctagagttcccccctttgtaatccaagtttctctctctaagctcttc---------tccaaaatctgcacaagaacactt-aaatactagccttccac 26313521  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttca 298  Q
    |||   |||||||||||||||||||| || |  ||| ||| |  |||||||| ||||||| ||||||||||||||| ||| |||||| ||||| |||| |    
T  26313522 tgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttga 26313621  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
     ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||  ||||| |||||||||||||||||||||||||    
T  26313622 aaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcac 26313721  T
Q  399 gatttctctgttcttccagaccacaaatttgaag 432  Q
    ||||||||||||||||||||||||||||||||||    
T  26313722 gatttctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 45 - 446
Target Start/End: Complemental strand, 7289827 - 7289425
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  7289827 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 7289729  T
Q  145 tcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttg 242  Q
    ||||||||||||| || ||||   ||||||||||||  || ||||||| |||||||||||| ||||||| ||||||||||  ||||| | ||||||||||    
T  7289728 tcttccaagctctctttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttg 7289629  T
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 342  Q
    | |  |  |||||||| ||| ||||||||||| |||||||||| ||||| |||||  |||||||||||||||| |||||||||||||||||||||||  |    
T  7289628 catctgatccaaggta-gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtc 7289530  T
Q  343 ctgcaaaccagctcacgacaccat-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 441  Q
    |||||||| |||||| | | || | |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  7289529 ctgcaaactagctcatggctcccttgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaagtcaatatca 7289430  T
Q  442 acagt 446  Q
    |||||    
T  7289429 acagt 7289425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 10689016 - 10688661
Alignment:
Q  28 tgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatcca 127  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||  |||| |||||    
T  10689016 tgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgttatcca 10688917  T
Q  128 agattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--a 225  Q
    || |||||| ||| |||||||||||||||| || |||| ||||||||||||||  || ||||||| |||||||||||| ||| ||| ||||||||||       
T  10688916 agtttctctttcttagctcttccaagctctctttcaaaactgcacaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttcccac 10688817  T
Q  226 gatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcg 325  Q
     ||| | ||||||||||| |  | |||||||| |||| ||||||||| |  ||||||||| ||||| |||||  ||||||||||||||||||||||||||    
T  10688816 aatcgtgtcacgatttgcatctgacccaaggt-tgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcg 10688718  T
Q  326 tgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
    || |||||||||||  ||||||||| |||||||| |||| |||||||||||||||||    
T  10688717 tgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 3439368 - 3439088
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||||||||  |||||| |||||||||  | |||||||||||||||| ||  ||| |  |||||| |||||||  ||||||  | |    
T  3439368 caaatctgcacaagaacacttta--tactagtcttcctctgttgaaatcgtgtcacgattttcccaatcgtgccacgatatgcgtaccacccaagaaacg 3439271  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||     
T  3439270 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaacctagctcacgg 3439172  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||  |||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  3439171 caccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 169 - 445
Target Start/End: Complemental strand, 10684015 - 10683738
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | |   |||| | ||||||| ||||||||||  ||||| | ||||||| |||    ||||| | || ||||||||    
T  10684015 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagt-tgaccagt 10683917  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccat 366  Q
    ||||||||  ||||||||| ||||| |||||  |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| |||| |    
T  10683916 ccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctt 10683817  T
Q  367 gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10683816 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 10683738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 162 - 436
Target Start/End: Complemental strand, 2627602 - 2627327
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||||||||| |||   ||   |||||||||||||||| |||||| | |||| | |  |||||||||| ||||  |     
T  2627602 caaatctgcacaagaacactt-aaatactagccctccaacgataaaatcgtgtcacgatttacagatcgtgtcacaaatggtgcgtacgtcacaagaaac 2627504  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    ||||| ||||||||| ||| |||||| ||||| ||||   ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  2627503 gaccaatccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacg 2627404  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
      | || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2627403 gaatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 2627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 45 - 444
Target Start/End: Complemental strand, 25328054 - 25327664
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||||| ||||||||| ||| |||||  ||||||||| |||||| | || ||||||  |||   |||||| ||||||||||        
T  25328054 aaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaacccataggatccctcctttgatctccaag-ttctctctct---- 25327960  T
Q  145 tcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttg 242  Q
          ||| |||| | ||||   ||||||||||||  || ||||||| ||||| |||||| ||||||| ||||||||||  ||||| | ||||||  ||    
T  25327959 -----taagttcttcttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgagctg 25327865  T
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 342  Q
    |    | |||||||| |||| |||||||||||  ||||||||| ||||| |||||  |||||||||||||||||||||||||||| || ||||||||  |    
T  25327864 caacggacccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtc 25327766  T
Q  343 ctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaa 442  Q
    |||||||| |||||||  |  | |||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25327765 ctgcaaactagctcacagccacttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaa 25327666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 162 - 444
Target Start/End: Original strand, 42575626 - 42575909
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  42575626 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaaggaaag 42575724  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 358  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| |||||| |||||||||   |||||||| || | |||||    
T  42575725 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcac 42575824  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    | || |  ||||||||||| |||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  42575825 ggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 169 - 445
Target Start/End: Complemental strand, 39784601 - 39784324
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| ||||| |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  39784601 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 39784503  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacacca 365  Q
    ||||||||  |||||||||  | || |||||  |||||||||||||||||||||||||||| |||||||| ||| || ||||||  | |||||| ||||     
T  39784502 ccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacc- 39784404  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
    |  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39784403 tccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacag 39784324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 322 - 432
Target Start/End: Complemental strand, 31043031 - 31042921
Alignment:
Q  322 atcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacca 421  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31043031 atcgtgtcacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagacca 31042932  T
Q  422 caaatttgaag 432  Q
    |||||||||||    
T  31042931 caaatttgaag 31042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 144 - 382
Target Start/End: Complemental strand, 25689841 - 25689604
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccaga-tcttttcacgatttg 242  Q
    ||||||||| ||||| | ||||  ||||||||||||||| |||||||||||||||||||  |||||||||||||||||| |  | || | ||||||||||    
T  25689841 ctcttccaacctcttcttcaaagatgcacaagaacactt-aaatactagccttcctctgttgcaatcgtgtcacgattttctcaatcgtgtcacgatttg 25689743  T
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 342  Q
     ||||   |||||| | |||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||||  |||||| |||||||| |||||    
T  25689742 tgtacaaaccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcacc 25689643  T
Q  343 ctgcaaaccagctcacgacaccatgaaatcgtgtcacgat 382  Q
    |||||| | |||||||| ||||  ||||||||||||||||    
T  25689642 ctgcaacctagctcacggcacc-cgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 233 - 444
Target Start/End: Complemental strand, 15290355 - 15290143
Alignment:
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcac 331  Q
    ||||||||||||| |||||||||| |  ||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| ||||||||||    
T  15290355 tcacgatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcac 15290256  T
Q  332 gatttggcaccctgcaaacc-agctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttga 430  Q
    ||||||   |||||||| || | |||||| || |  ||||||||||| | || ||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  15290255 gatttgcacccctgcaaccctaactcacggcatc-cgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 15290157  T
Q  431 agccaatatcaaca 444  Q
    || |||| ||||||    
T  15290156 agacaatctcaaca 15290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 233 - 444
Target Start/End: Complemental strand, 15470724 - 15470512
Alignment:
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcac 331  Q
    ||||||||||||| |||||||||| |  ||||||||||||||||||||||||| ||||| |||||   |||||||||||| |||||||| ||||||||||    
T  15470724 tcacgatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcac 15470625  T
Q  332 gatttggcaccctgcaaacc-agctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttga 430  Q
    ||||||   |||||||| || | |||||| || |  ||||||||||| | || ||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  15470624 gatttgcacccctgcaaccctaactcacggcatc-cgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 15470526  T
Q  431 agccaatatcaaca 444  Q
    || |||| ||||||    
T  15470525 agacaatctcaaca 15470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 300 - 432
Target Start/End: Original strand, 7412807 - 7412939
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    ||||||||||||||||| ||| || ||  ||||||||| ||||||||||||||||||||| ||  |   |||||||||||||||||||| ||||||||||    
T  7412807 aatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggcattacagaatcgtgtcacgatgccaaaatcgtgtcacg 7412906  T
Q  400 atttctctgttcttccagaccacaaatttgaag 432  Q
    ||||||||||||||||| |||||||||||||||    
T  7412907 atttctctgttcttccaaaccacaaatttgaag 7412939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 169 - 437
Target Start/End: Original strand, 35745702 - 35745971
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  35745702 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 35745800  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  ||  |||||   ||||||| || |     
T  35745801 ccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctcacggcatc- 35745899  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   |||||||||||| ||||||| ||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  35745900 tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 35745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31071134 - 31071035
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||| ||||||||||||||||||| || |||||||| |||||| |||||||||||||| ||||||||| ||  ||| ||||||||||||||||    
T  31071134 agaggaagcttaagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaa 31071036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 7412532 - 7412666
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| ||||||| |||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||||||||||||||||||||||    
T  7412532 aggaagcttttgatcctttcaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactcaacc 7412628  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||| ||||  |||||||||||| ||||||||||    
T  7412629 ctaaagttacctcctttgtaatccaagtttctctctct 7412666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 10688672 - 10688618
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10688672 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 4456220 - 4456354
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||| ||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||| ||||||||||||    
T  4456220 aggaagcttttgatccttctaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacagagacactcaacc 4456316  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||| ||||  |||||||||||| ||||||||||    
T  4456317 ctaaagttacctcctttgtaatccaagtttctctctct 4456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 25689615 - 25689561
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  25689615 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaatctcaaca 25689561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 5702006 - 5701959
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5702006 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 300 - 408
Target Start/End: Original strand, 1746665 - 1746773
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgac---accatgaaatcgtgtcacga-tgccaaattcgtgt 395  Q
    ||||||||||||||||||||| |||||||||||||| | | ||||| ||| |||||| ||||   ||||  |||||||||||||| ||||||||| ||||    
T  1746665 aatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctg-aaaacagctctcgacattacca--aaatcgtgtcacgattgccaaatt-gtgt 1746760  T
Q  396 cacgatttctctg 408  Q
    |||||||||||||    
T  1746761 cacgatttctctg 1746773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 4696502 - 4696379
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||| ||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   |||  |    
T  4696502 gatctttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttatc 4696406  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  4696405 tcctttgtaatccaagtttctctctct 4696379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 5702374 - 5702251
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||| ||||||||||||| || |||||||| |||||| ||||||| |||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  5702374 gatcattccaatggtgaaatc-tcactacccaaggtgtttacaatattt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacc 5702278  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  5702277 tcctttgtaatccaagtttctctctct 5702251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 19175659 - 19175528
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    ||||| |||| |||||||||||| ||||| || |||||||| |||||| |||||||||||  | ||| ||||| ||  ||| ||||||||||||||||||    
T  19175659 aggaaacttttgatccttccaatagtgaaatc-tcactacccaaggtgtttacaatgttt--cccaatccaagagatcctcactacaaagacactcaacc 19175563  T
Q  103 ctttggttccctcaattgtaatccaagattctctc 137  Q
    ||   ||| ||||  |||||||||||| |||||||    
T  19175562 ctaaagttacctcctttgtaatccaagtttctctc 19175528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 23799470 - 23799347
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || || ||||  |||||| ||||||||||   | ||||||||| ||  ||||||||||||||||||||||||   ||| ||    
T  23799470 gatccttccaatggtgaaatc-tccctactcaaggtgtttacaatgttc--cccaacccaagagatcctctctacaaagacactcaaccctaaagttacc 23799374  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||| ||||||||||    
T  23799373 tcctttgtaatccaagtttctctctct 23799347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 436
Target Start/End: Original strand, 4456578 - 4456624
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||    
T  4456578 tcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 4456624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 9054314 - 9054231
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    |||||||||||||||||| | ||||||||| |||||||||| ||||||||   ||||||||| || |||| ||||||| ||||||||    
T  9054314 gatccttccaatggtgaaat-ctcactacccaaggtgattataatgtttt--ccaacccaagagaatctcactacaaaaacactcaa 9054231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 300 - 382
Target Start/End: Original strand, 19945786 - 19945869
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccat-gaaatcgtgtcacgat 382  Q
    |||||||||||||||||| || |||||||||||||| | | ||||| |||||||||| |||||  ||  |||||||||||||||    
T  19945786 aatcgtgtcacgatttcctaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattatcaaaatcgtgtcacgat 19945869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 4733547 - 4733485
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| |||||||| ||||||||||||||   ||||||| ||| ||||||||||||    
T  4733547 aatcgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctggaaaacagctcacgaca 4733485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 25328180 - 25328122
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccc 103  Q
    ||||||||||||||||||||| ||||||||| ||| |||||  ||||||||| ||||||    
T  25328180 aaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaaccc 25328122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 31043189 - 31043128
Alignment:
Q  163 aaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcca 225  Q
    |||||||||||||||||||| ||||||||| ||||| ||||   |||||||||||||||||||    
T  31043189 aaatctgcacaagaacactt-aaatactagtcttccactgataaaatcgtgtcacgatttcca 31043128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 31217978 - 31217916
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    ||||||||||||||||||||| |||||||||| ||| | | ||||| |||||||||| |||||    
T  31217978 aatcgtgtcacgatttcccaaaatcgtgtcacaattggacgccctgaaaaccagctctcgaca 31217916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 15212508 - 15212459
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||||||    
T  15212508 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 15212459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 19752288 - 19752163
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    ||||||||||||| |||| || |||||||| |||||| ||||||| |||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  19752288 gatccttccaatgatgaaatc-tcactacccaaggtgtttacaatattt--cacaacccaagagaacctcactacaaagacactcaaccctaaagttacc 19752192  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||  ||||||| ||||||||||||    
T  19752191 tcctttgcgatccaagtttctctctctaa 19752163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 22976038 - 22975986
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 352  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||| ||||||    
T  22976038 aatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaacca 22975986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 23799146 - 23799099
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||||| ||||||||||||||||| || |||||||||||||| |||||    
T  23799146 tcgtgttacgatttctctgttctttcaaaccacaaatttgaaaccaat 23799099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 34256951 - 34256986
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatt 335  Q
    ||||||||||||||||||||| ||||||||||||||    
T  34256951 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 34256986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 382
Target Start/End: Complemental strand, 43036145 - 43036062
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacgacaccatgaaatcgtgtcacgat 382  Q
    |||||||||||| ||| |||| |||||||||||||| | ||||||||||| || ||||||| ||    ||||||||||||||||    
T  43036145 aatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcgaaatcgtgtcacgat 43036062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 4731380 - 4731318
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||| ||||| | |||||||| |||||||||||||| | ||||||| ||| ||||||||||||    
T  4731380 aatcatgtcatgttttcccaaaatcgtgtcacgattggacaccctgtaaaacagctcacgaca 4731318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 390 - 436
Target Start/End: Complemental strand, 19175279 - 19175233
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||| |||||||| |||||||||||| ||| |||||||||||||||    
T  19175279 tcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaa 19175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 26403123 - 26403034
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaaccc--aagtgactctctctacaaagacactcaaccct 104  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||  ||| ||  ||| ||||||||||||||||||||    
T  26403123 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaaccctcaagagaacctcactacaaagacactcaaccct 26403034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 30143064 - 30143015
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||  |||||||| |||||||||||||| | |||||||||||    
T  30143064 aatcgtgtcacattttcccaaaatcgtgtcacgattggacaccctgcaaa 30143015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 42435655 - 42435704
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| || ||||| |||||||||||||| | |||||||||||    
T  42435655 aatcgtgtcacgtttccccaaaatcgtgtcacgattggacaccctgcaaa 42435704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 229; Significance: 1e-126; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 436
Target Start/End: Complemental strand, 17857 - 17440
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||| ||  ||||||||||||||||||||    
T  17857 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaa 17759  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctctt-ttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||   ||||||||  |||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||||     
T  17758 ccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaatctgcacaagaacactt-aaatactagccttcca 17660  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||||   |||||||||||||||   |                 |||||||| ||||||| ||||| |||||||||||||||||||| ||||| |||| |     
T  17659 ctgataaaatcgtgtcacgattggaa-----------------cgtacgtcacaaggtacgaccaatccttatcaaggatacttaacgagcaagtttgaa 17577  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||    
T  17576 aatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 17477  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||||||||||||||||||||||||    
T  17476 atttctctgttcttccagaccacaaatttgaagccaa 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 23950 - 23795
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||| ||  ||||||||||||||||||||    
T  23950 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaa 23852  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctct 157  Q
    ||||   ||||||||  |||||||||||| |||||||||||||||||||||||||||    
T  23851 ccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctct 23795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 436
Target Start/End: Complemental strand, 24202674 - 24202260
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  24202674 agaggaagctttagatccttccaatggtgagatc-tcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaa 24202576  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctc 200  Q
    ||||   ||||||||  |||||||||||| ||||||||||||||||||||||||||| | | |||| ||||||||||||| |||||||||||||||||||    
T  24202575 ccctaaagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctccaaaatatgcacaagaacac-ttaaatactagccttcctc 24202477  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttca 298  Q
    |||  |||||||||||||||||||||||| | ||||||||||  ||| ||||||||| ||||||||||||||||||||||||||||| ||||| |||| |    
T  24202476 tgatacaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtgcgtcccaagatatgaccagtccttatcaaggatacttaacgagcaagtttga 24202377  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcac 398  Q
     |||||||||||||                     |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  24202376 aaatcgtgtcacga---------------------tttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcac 24202298  T
Q  399 gatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24202297 gatttctctgttcttccagaccacaaatttgaagccaa 24202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 432
Target Start/End: Complemental strand, 19366213 - 19365781
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| ||||||| |||||| ||||||||| ||  ||| ||||||||||||||||    
T  19366213 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacactcaa 19366115  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcct 199  Q
    ||||   ||||||||  |||||||||||| |||||||||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||| |||||     
T  19366114 ccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaatctgcacaagaacactt-aaatactagtcttcca 19366016  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttc 297  Q
    ||||   |||||||||||||||||||  || | |||||||| |  |||||||| ||| ||| |||| |||||||||  ||| | |||| ||||| ||||     
T  19366015 ctgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaatgtacgacctgtccttatcctggaaaattaacgagcaagtttg 19365916  T
Q  298 acaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtca 397  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||||||||||||||    
T  19365915 aaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtca 19365816  T
Q  398 cgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||||||||||| ||||||||||||||||||    
T  19365815 cgatttctctgttctttcagaccacaaatttgaag 19365781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 24787268 - 24786905
Alignment:
Q  1 agaggaagctttagatccttccaa-tggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactca 99  Q
    |||||||||||||||||||||||| |  ||||||||||||| || |||||||||| |||||||||| ||||||||| ||| ||||| |||||||||||||    
T  24787268 agaggaagctttagatccttccaactaatgaactcctcactgcccaaggtgattataatgtttttcccaacccaagagacactctcaacaaagacactca 24787169  T
Q  100 accctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||||||||||||||  |||| ||||||| |||||||||||||||||||||||||||  | ||||   ||||||||||||  || ||||||| ||||||    
T  24787168 accctttggttccctcctttgttatccaag-ttctctctctaagctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagtcttcct 24787070  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||  | |||||||| ||||||||||||||||||||||||||| ||||| |||||      
T  24787069 ctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctg 24786970  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacacc 364  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| ||||    
T  24786969 aatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 24786905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 168 - 432
Target Start/End: Original strand, 20622543 - 20622808
Alignment:
Q  168 tgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||| |  ||||||||||||||  |||||||||||||||||    
T  20622543 tgcacaagaacactttatatactagccttcctctgaagcaattgtgtcacgattttccaaatcatgccacgatttgcgtaccacccaaggtatgaccagt 20622642  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccat 366  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||| |||||     
T  20622643 ccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccac 20622742  T
Q  367 gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20622743 gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 20622808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 436
Target Start/End: Complemental strand, 19361337 - 19360921
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||||||| | ||||||||| ||  ||| ||||||||||||||||    
T  19361337 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttttcc-caacccaagagatcctcactacaaagacactcaa 19361240  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcct 199  Q
    ||||   ||||||||  |||||||| ||| |||||||||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||| |||||     
T  19361239 ccctagagttccctcctttgtaatctaagtttctctctctaagctcttccaagctctcctccaaaatctgcacaagaacactt-aaatactagtcttcca 19361141  T
Q  200 ctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||||   |||||||||||||||   |                 |||||||| ||||||| |||| |||||||||  ||| |||||| ||||| |||| |     
T  19361140 ctgataaaatcgtgtcacgattggta-----------------cgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaa 19361058  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||| ||||||||||||||||    
T  19361057 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacg 19360958  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||| ||||||||||||||||||||||    
T  19360957 atttctctgttctttcagaccacaaatttgaagccaa 19360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 9987069 - 9986798
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||   ||| ||||||||||||||||||| | ||||||||  ||| | |||||||||||||    
T  9987069 caaatctgcacaagaacactt-aaatactagccctccactgataaaattgtgtcacgatttccagatcgtgtcacgattggtgcatccgtcccaaggtat 9986971  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 359  Q
    ||||||||||||| | ||| |||||| ||||| ||||   ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  9986970 gaccagtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcacactgcagaccagctcacg 9986871  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
     ||||| |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  9986870 gcaccacgaaatcgtgttacgatgtcaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9986798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 162 - 445
Target Start/End: Complemental strand, 21053824 - 21053539
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||   |||||||||||||||||| |||| | ||||||||  ||| | |||| ||||||||    
T  21053824 caaatctgcacaagaacactt-aaatacatgccttccactgataaaatcgtgtcacgatttcctgatcgtgtcacgattggtgcatccgtctcaaggtat 21053726  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgttt-cacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 358  Q
    ||||||||||||||| ||| |||||| ||||| |||| |||||||||||||||||||||||  ||||||||||||||||||||| ||||  | |||||||    
T  21053725 gaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccttgcattctagctcac 21053626  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
      ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  21053625 tgcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 21053539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 162 - 432
Target Start/End: Complemental strand, 40282243 - 40281971
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtat 259  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||   |||||||||||||||||| |||| | ||||||||  ||| | |||||||||||||    
T  40282243 caaatctgcacaagaacactt-aaatacatgccttccactgataaaatcgtgtcacgatttcctgatcgtgtcacgattggtgcatccgtcccaaggtat 40282145  T
Q  260 gaccagtccttatcaaggatacttaatgagcatgttt-cacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 358  Q
    ||||||||||||||| ||| |||||| ||||| |||| ||||||||||||||||||| |||  ||||||||||||||||||||||||||| | |||||||    
T  40282144 gaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacctagctcac 40282045  T
Q  359 gacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    | |||||  ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  40282044 ggcaccactaaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaag 40281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 243 - 436
Target Start/End: Complemental strand, 51765192 - 51764999
Alignment:
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 342  Q
    |||||||| ||||||||||||||||||||||| ||| |||||| ||||| ||||   ||||||||||||||| | |||||||||||||||||||||||||    
T  51765192 cgtacgtcacaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcacc 51765093  T
Q  343 ctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  51765092 ctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaa 51764999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 9036284 - 9036003
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||||||||||||||  |||||| |||||||||  | |||||||||||||||| ||  ||| | ||||||| ||||||   ||||||  | |    
T  9036284 caaatctgcacaagaacacttta--tactagtcttcctctgttgaaatcgtgtcacgattttcccaatcgtgtcacgatctgcgtaacacccaagaaacg 9036187  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacga 360  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||  ||| || ||| ||||| || ||||||||||| | ||||||||     
T  9036186 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctagctcacgg 9036087  T
Q  361 caccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9036086 caccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 170 - 382
Target Start/End: Complemental strand, 24793921 - 24793709
Alignment:
Q  170 cacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatttgcgtacgtcccaaggtatgaccagtcct 269  Q
    |||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||||  | |||||||| |||||||||||    
T  24793921 cacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtcct 24793822  T
Q  270 tatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaa 369  Q
    |||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||| ||||  |||    
T  24793821 tatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaa 24793722  T
Q  370 atcgtgtcacgat 382  Q
    |||||||||||||    
T  24793721 atcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 44203500 - 44203218
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  44203500 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 44203402  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| |||||   ||||||||||||||| || | |||||| |||||||||   |||||||| || ||||||||    
T  44203401 accagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacg 44203302  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     |||| |  |||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44203301 gcacc-tccaatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 44203218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 169 - 444
Target Start/End: Original strand, 41390910 - 41391185
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| ||||| |||||| ||||||| ||||||||||  ||||| | ||||||| |||    | ||| |||| ||||||||    
T  41390910 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcagcggaccccaggt-tgaccagt 41391008  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccat 366  Q
    ||||||||  ||||||||||||||| |||||  |||| ||||||||||||||||||||||| |||||||||||  |||||||||  ||||||| || | |    
T  41391009 ccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcatc-t 41391107  T
Q  367 gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41391108 caaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaaatcaaca 41391185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 3 - 432
Target Start/End: Complemental strand, 13604527 - 13604108
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||| ||||||||    
T  13604527 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagatactcaacc 13604431  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   ||||||||  |||||||||||| ||||||||||      ||  |||||||  |||||| | ||||||||||||||| | |||  || ||||  ||    
T  13604430 ctaaagttccctcctttgtaatccaagtttctctctct------tt--aagctctcctccaaaatttgcacaagaacactt-atatagcagtcttcagct 13604340  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||   ||||||| |||| |||||| ||| | ||||||||  | |||||| ||||||||| |||||  |||||||  | | ||||||  |||| |||| |     
T  13604339 gataaaatcgtgccacgttttccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaa 13604241  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||| |||||||||| | ||| |||||||||||||||| ||| |||||||||||||||||||| ||  |||||||| |||||| ||| | ||||||||||    
T  13604240 aatcatgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacg 13604141  T
Q  400 atttctctgttcttccagaccacaaatttgaag 432  Q
    ||||||||||||||||| |||||||||||||||    
T  13604140 atttctctgttcttccaaaccacaaatttgaag 13604108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 19358748 - 19358530
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||||||| | ||||||||  ||  ||| ||||||||||||||||    
T  19358748 agaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttttcc-caacccaaaagatcctcactacaaagacactcaa 19358651  T
Q  101 ccctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttcc-aaatctgcacaagaacactttaaatactagccttcct 199  Q
    ||||   ||||||||  |||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||| ||||||||||| |||||     
T  19358650 ccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaatctgcacaagaacac-ttaaatactagtcttcca 19358552  T
Q  200 ctgaagcaatcgtgtcacgatt 221  Q
    ||||   |||||||||||||||    
T  19358551 ctgataaaatcgtgtcacgatt 19358530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 169 - 444
Target Start/End: Complemental strand, 1054790 - 1054514
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| | ||| |||||| ||||||||||||||||||  ||||| | ||||||| |||    || || |||| ||||||||    
T  1054790 gcacaagaacacaatatatactagtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggttcccaggt-tgaccagt 1054692  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||||||  |||||||||  | |||||| ||||     
T  1054691 ccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcacggcacc- 1054593  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |  |||||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1054592 tccaatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1054514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 169 - 444
Target Start/End: Original strand, 39445806 - 39446082
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  39445806 gcacaagaacacaatatatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 39445904  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacacca 365  Q
    ||||||||  ||||||||| ||||| |||||   ||||||||| ||||||||||||||||| |||||||||||  |||||||||  | |||||| || |     
T  39445905 ccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcacggcatc- 39446003  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    | ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39446004 tcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 39446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 169 - 444
Target Start/End: Complemental strand, 44023653 - 44023377
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || |||| || | ||| |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  44023653 gcacaagaacacaatatataccagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 44023555  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||| || ||||||  | |||||| ||||     
T  44023554 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacc- 44023456  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44023455 tccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 44023377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 25439675 - 25439406
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  |||||||||| | ||| |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  25439675 gcacaagaacacaataaatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacagtccccaggt-tgaccagt 25439577  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||   ||||||||||||||||||||||||||| |||||||| ||| |||||||||   ||||||| || |     
T  25439576 ccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctcacggcatc- 25439478  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    | |||||||||||||||  | || ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25439477 tcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 25444868 - 25444599
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  |||||||||| | ||| |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| |||| ||||||||    
T  25444868 gcacaagaacacaataaatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccctaggt-tgaccagt 25444770  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    ||||||||  |||||||||  | || |||||   ||||||||||||||||||||||||||| |||||||| ||| ||| |||||   ||||||| || |     
T  25444769 ccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctcacggcatc- 25444671  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    | |||||||||||||||  | || ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25444670 tcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 169 - 382
Target Start/End: Original strand, 41398565 - 41398778
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || ||||||| ||||| |||||| ||||||| ||||||||||  ||||| | ||||||| |||    | ||| |||| ||||||||    
T  41398565 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcagcggaccccaggt-tgaccagt 41398663  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccat 366  Q
    ||||||||| ||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||  |||||||||  ||||||| || | |    
T  41398664 ccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcatc-t 41398762  T
Q  367 gaaatcgtgtcacgat 382  Q
     |||||||||||||||    
T  41398763 caaatcgtgtcacgat 41398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 300 - 437
Target Start/End: Complemental strand, 26644518 - 26644381
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||||||||||| |||| ||| |||||| ||||||||| |||| |||||||||||||| ||||  |  ||||||||| |||||| |||| |||| |||||    
T  26644518 aatcgtgtcacgttttcacaaaatcgtgccacgatttgacaccgtgcaaaccagctcatgacattacaaaatcgtgttacgatgacaaaatcgtatcacg 26644419  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||| ||||||||||||| ||||||||||| ||||||||    
T  26644418 attcctctgttcttccaaaccacaaatttaaagccaat 26644381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 24793720 - 24793666
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24793720 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 24793666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 3281899 - 3282030
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||    
T  3281899 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 3281995  T
Q  103 ctttggttccctcaattgtaatccaagattctctc 137  Q
     |   ||| ||||| |||||||||||| |||||||    
T  3281996 ataaagttacctcatttgtaatccaagtttctctc 3282030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 43988226 - 43988057
Alignment:
Q  168 tgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccag 265  Q
    ||||||||| ||||||||||||||| | | | |||||| ||||||| ||||||||||  ||||| | ||||||| |||    ||||| | || |||||||    
T  43988226 tgcacaagagcactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaagt-tgaccag 43988128  T
Q  266 tccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 336  Q
    |||||||||  |||||||||  |||| |||||  |||||||||||||||| ||||||||||| ||||||||    
T  43988127 tccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattt 43988057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 447
Target Start/End: Original strand, 41398767 - 41398824
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagtt 447  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  41398767 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaaatcaacagtt 41398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 47098719 - 47098594
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  47098719 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcgctacaaagacactcaaccctaaagttacc 47098623  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||||||||||| ||||||||||||    
T  47098622 tcctttgtaatccaagtttctctctctaa 47098594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 41398419 - 41398490
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccc-tttggttccctc 115  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| ||||||||||||    
T  41398419 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatttggttccctc 41398490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 47102733 - 47102608
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    ||||||||||||| |||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||||   ||| ||    
T  47102733 gatccttccaatgatgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacc 47102637  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||||||||||| ||||||||||||    
T  47102636 tcctttgtaatccaagtttctctctctaa 47102608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 436
Target Start/End: Complemental strand, 21536189 - 21536121
Alignment:
Q  368 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||| ||   || ||||||||||||||||||||||||||| |||||||||||||||||||    
T  21536189 aaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21536121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 13598970 - 13599017
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13598970 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 13599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 21536475 - 21536344
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || | |||||| |||||| |||||||||||| |  |||| ||| ||  ||| ||||||||||||||||||    
T  21536475 aggaagctttcgatccttccaatggtgaaatctt-actacccaaggtgtttacaatgttttcc--aacctaagagatcctcactacaaagacactcaacc 21536379  T
Q  103 ctttggttccctcaattgtaatccaagattctctc 137  Q
    ||   ||| ||||  |||||||||||| |||||||    
T  21536378 ctaaagttacctcctttgtaatccaagtttctctc 21536344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 41390764 - 41390835
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaa-ccctttggttccctc 115  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||| || ||||||||||||    
T  41390764 aaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaatccatttggttccctc 41390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19379977 - 19379916
Alignment:
Q  1 agaggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttt 63  Q
    ||||||||||||||||||||||||||||||| | ||||||||| |||||| ||||||||||||    
T  19379977 agaggaagctttagatccttccaatggtgaaat-ctcactacccaaggtgtttacaatgtttt 19379916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 37069959 - 37070093
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| | |||| || | |||||| ||||||||  |||| ||||||||| ||  ||| ||||||||||||||||||    
T  37069959 aggaagcttttgatccttccaatggtgaaat-ctcattatccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaacc 37070055  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
     |   ||| ||||  |||||||||||| ||||||||||    
T  37070056 ataaagttacctcctttgtaatccaagtttctctctct 37070093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 29652016 - 29652137
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||  ||  ||| ||||||||||||||||||||   ||| ||    
T  29652016 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaaaagatcctcactacaaagacactcaaccctaaagttacc 29652112  T
Q  114 tcaattgtaatccaagattctctct 138  Q
    ||  |||||||||||| ||||||||    
T  29652113 tcctttgtaatccaagtttctctct 29652137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 13659846 - 13659897
Alignment:
Q  393 tgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  13659846 tgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 13659897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 37070337 - 37070384
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  37070337 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaat 37070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 20762393 - 20762331
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    ||||||||||||||||||||| |||||||||||||| | | ||||| |||||||||| |||||    
T  20762393 aatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaccagctctcgaca 20762331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 31658956 - 31658898
Alignment:
Q  304 gtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||| |||||| |||||    
T  31658956 gtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaaacagctctcgaca 31658898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 32889632 - 32889766
Alignment:
Q  5 gaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccct 104  Q
    |||||||| || ||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||   |  ||| ||||||||||||||||||||    
T  32889632 gaagcttttgaaccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaaaaaaacctcactacaaagacactcaaccct 32889728  T
Q  105 ttggttccctcaattgtaatccaagattctctctctaa 142  Q
       ||| ||||  ||| |||||||| ||||||||||||    
T  32889729 aaagttacctcctttgcaatccaagtttctctctctaa 32889766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 27104291 - 27104171
Alignment:
Q  18 cttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaa 117  Q
    |||||||||||||| || |||||||| |||||| ||| |||||||  | ||||||||| ||| ||| |||||||||||||||||| |   ||| ||||      
T  27104291 cttccaatggtgaaatc-tcactacccaaggtgcttataatgttt--cccaacccaagagac-ctcactacaaagacactcaaccttaaagttacctcct 27104196  T
Q  118 ttgtaatccaagattctctctctaa 142  Q
    |||||||||||| ||||||||||||    
T  27104195 ttgtaatccaagtttctctctctaa 27104171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 28220673 - 28220722
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  28220673 aatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaa 28220722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 28223868 - 28223917
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  28223868 aatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaa 28223917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 13598603 - 13598726
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| ||||||||  |||  ||||||||| ||  ||| |||||||||||||||||| |   ||| ||    
T  13598603 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatg--tttgccaacccaagagatcctcactacaaagacactcaaccataaagttacc 13598699  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||  ||||||||||    
T  13598700 tcctttgtaatccaattttctctctct 13598726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 436
Target Start/End: Original strand, 3282276 - 3282322
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||    
T  3282276 tcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaa 3282322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 26644803 - 26644705
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||  |||||| |||||||||||  | ||||||||  ||   || ||||||||||||||||||    
T  26644803 aggaagcttttgatccttccaatggtgaaatc-tcactactcaaggtgtttacaatgttt--cccaacccaaaagatcttcactacaaagacactcaacc 26644707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 49918071 - 49918009
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| ||| | || |||||||||||||| ||||||||||||| |||||| |||||    
T  49918071 aatcgtgtcacgtttttcgaaaatcgtgtcacgattgggcaccctgcaaaacagctctcgaca 49918009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 51765254 - 51765197
Alignment:
Q  163 aaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatt 221  Q
    |||||||||||||||||||| ||||||||||||||| ||||   |||||||||||||||    
T  51765254 aaatctgcacaagaacactt-aaatactagccttccactgataaaatcgtgtcacgatt 51765197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 3156589 - 3156540
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||| | | |||||||| ||||||||||||||||||||||||||||    
T  3156589 aatcgtgttatgttttcccaaaatcgtgtcacgatttggcaccctgcaaa 3156540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 9022799 - 9022715
Alignment:
Q  15 atccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    ||||||||||||||||| || |||||||  |||||| |||||||||||  ||||||||||| ||  ||| ||||||||||| ||||||    
T  9022799 atccttccaatggtgaaatc-tcactacgaaaggtgtttacaatgttt--ctcaacccaagagaacctcactacaaagacattcaacc 9022715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 16124235 - 16124188
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||| |||||||||||||||||||||| ||||||||||| || |||||    
T  16124235 tcgtatcacgatttctctgttcttccaaaccacaaatttaaaaccaat 16124188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 11348223 - 11348161
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    |||||||||||| ||  |||| |||||||||||||| | ||||||||||| |||||| |||||    
T  11348223 aatcgtgtcacgtttctccaaaatcgtgtcacgattagacaccctgcaaaacagctctcgaca 11348161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 40816710 - 40816621
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaaccc--aagtgactctctctacaaagacactcaaccct 104  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||  ||| ||  ||| ||||||||||||||||||||    
T  40816710 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaaccctcaagagaacctcactacaaagacactcaaccct 40816621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 9476465 - 9476590
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||| ||||||||| || |||||||| ||| || |||||||||||  | ||||| ||| ||  ||| ||||||||||| |||||||    ||| ||    
T  9476465 gatccttcaaatggtgaaatc-tcactacccaagatgtttacaatgttt--cccaaccaaagagaacctcactacaaagacattcaacccaaaagttacc 9476561  T
Q  114 tcaattgtaatccaagattctctctctaa 142  Q
    ||  |||||||||||| ||||||||||||    
T  9476562 tcctttgtaatccaagtttctctctctaa 9476590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 184; Significance: 4e-99; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 144 - 436
Target Start/End: Original strand, 11453 - 11744
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt--t 241  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||||||||||| ||||   ||||||||||||||||||||||| | ||||||||  |    
T  11453 ctcttccaa-ctctcttcaaaatctgcacaagaacactt-aaatactagccttccactgataaaatcgtgtcacgatttccagatcgtgtcacgattggt 11550  T
Q  242 gcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcac 341  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||| ||||| ||||   ||||||||||||||||||||| ||||||||||||||||||||    
T  11551 gcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcgtgtcacgatttggcac 11649  T
Q  342 cctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11650 cctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaagccaa 11744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 241 - 436
Target Start/End: Original strand, 9105 - 9299
Alignment:
Q  241 tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggca 340  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||| ||||| ||||   ||||||||||||||||||||| ||| |||||||||||||||    
T  9105 tgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcatgtcacgatttggca 9203  T
Q  341 ccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9204 ccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 9027 - 9102
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatt 221  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||||||||||| ||||   |||||||||||||||    
T  9027 ctcttccaa-ctctcttcaaaatctgcacaagaacactt-aaatactagccttccactgataaaatcgtgtcacgatt 9102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 135; Significance: 6e-70; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 45 - 445
Target Start/End: Complemental strand, 34963 - 34553
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccctcaattgtaatccaagattctctctctaagc 144  Q
    ||||||||||||||||||| |  |||||||| ||| ||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||||||||||||||    
T  34963 aaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagc 34865  T
Q  145 tcttccaagctcttttc----------caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttt 232  Q
    || | |||||||| ||           ||||   ||| ||||||||  || ||||||| |||||||||||| ||| ||| ||||||||||  ||||| |     
T  34864 tcatacaagctctcttaagattcacttcaaaaaagcaaaagaacacaatatatactagtcttcctctgaagaaatagtgccacgatttccctagatcgtg 34765  T
Q  233 tcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacg 332  Q
    ||||||| |||    | ||||||||| ||| |||||||||||  ||||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||    
T  34764 tcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacg 34666  T
Q  333 atttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 432  Q
    |||||||  | ||||||| | || ||| |  | |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34665 atttggcgtcatgcaaacaaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 34566  T
Q  433 ccaatatcaacag 445  Q
    |||||||||||||    
T  34565 ccaatatcaacag 34553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 126; Significance: 2e-64; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 243 - 436
Target Start/End: Complemental strand, 22141 - 21948
Alignment:
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 342  Q
    |||||||| ||||||| |||| ||||||||||  ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||  |    
T  22141 cgtacgtcacaaggtacgacctgtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtc 22042  T
Q  343 ctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||| |||||||| ||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  22041 ctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaa 21948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 22204 - 22146
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatt 221  Q
    ||||||||||||||||||||| ||||||||||||||| ||||   |||||||||||||||    
T  22204 caaatctgcacaagaacactt-aaatactagccttccactgataaaatcgtgtcacgatt 22146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 123; Significance: 9e-63; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 142 - 408
Target Start/End: Complemental strand, 787 - 519
Alignment:
Q  142 agctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcttttcacgatt 240  Q
    ||||| ||||||||||  |||||| ||||||||||||||||| ||||||||| ||||| ||||   ||||||||||||||||||| ||| | |||| |||    
T  787 agctcatccaagctctcctccaaaatctgcacaagaacactt-aaatactagtcttccactgataaaatcgtgtcacgatttccaaatcgtgtcacaatt 689  T
Q  241 tg--cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttgg 338  Q
     |  |||||||| ||||||| ||||||||| ||||  ||| |||||| |||||  ||| | ||||||||||||||| | |||||||||||||||||||||    
T  688 ggtacgtacgtcacaaggtacgaccagtccctatcctggaaacttaacgagcaaatttgaaaatcgtgtcacgattcctcaagatcgtgtcacgatttgg 589  T
Q  339 caccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 408  Q
    |||||||||||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  588 caccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 121; Significance: 1e-61; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 162 - 444
Target Start/End: Original strand, 2903 - 3185
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    ||||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||||| |||||||||| | |    
T  2903 caaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 3001  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    |||||||||||||||| |||||||| ||||| |||||   |||||||||||||||||||  |||||| |||||||||   |||||||| || ||||||||    
T  3002 accagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacg 3101  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     || |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3102 gcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 120; Significance: 6e-61; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 144 - 444
Target Start/End: Complemental strand, 6159 - 5859
Alignment:
Q  144 ctcttccaagctcttttccaaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttg 242  Q
    ||||||||| |||| ||| |||||||||||||||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||| | ||||||||||    
T  6159 ctcttccaacctctcttc-aaatctgcacaagaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttg 6062  T
Q  243 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacga-tttcccaagatcgtgtcacgatttggcac 341  Q
    ||| |||||||||| | |||||||||||||||||||||||||| ||||| ||||||| |||||||||||| ||| |||  |||||| ||||| || ||||    
T  6061 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaatttgcac 5962  T
Q  342 cctgcaaacc-agctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatc 440  Q
    ||||||| || |||||||| |||| |  |||||||||||||  ||||| ||||| ||||||||| ||||||||||||||||||||||||||| |||| ||    
T  5961 cctgcaaccctagctcacggcacc-tccaatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctc 5863  T
Q  441 aaca 444  Q
    ||||    
T  5862 aaca 5859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 119; Significance: 2e-60; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 169 - 444
Target Start/End: Complemental strand, 3613 - 3337
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||| ||  || ||||||| ||||| |||||| |||||||||||||||| |  ||||| | ||||||| |||    ||||| |||| |||| |||    
T  3613 gcacaagaatacaatatatactagtcttcccctgaagaaatcgtgtcacgattttcctagatcgtgtcacgatctgcaacggtccccaggt-tgactagt 3515  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccat 366  Q
    ||||||||  ||||||||| ||||| |||||  |||||||||||||||||||||||||||| |||||||||||  ||| ||||| |||||||| |  | |    
T  3514 ccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaactagctcacggccactt 3415  T
Q  367 gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3414 gaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaatatcaaca 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 3750 - 3679
Alignment:
Q  45 aaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccc-tttggttccctc 115  Q
    |||||||||||||||||||||  |||| ||| ||| ||||| ||||||||||||||||| ||||||||||||    
T  3750 aaggtgattacaatgtttttcctaacctaagagacactctcaacaaagacactcaacccatttggttccctc 3679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 117; Significance: 4e-59; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 162 - 444
Target Start/End: Original strand, 4028 - 4310
Alignment:
Q  162 caaatctgcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcttttcacgatttgcgtacgtcccaaggtatg 260  Q
    |||||||||||| |||||||| || |||||| |||||||||   ||||||||||||||||| ||  ||  | ||||||||||||| |||||||||| | |    
T  4028 caaatctgcacaggaacactt-aagtactagtcttcctctgttccaatcgtgtcacgattttcccaattgtgtcacgatttgcgtccgtcccaaggaacg 4126  T
Q  261 accagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 359  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||||||||||||||||  |||||| |||||||||   |||||||| || ||||||||    
T  4127 accagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacg 4226  T
Q  360 acaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
     |||| | ||||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  4227 gcacc-taaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 105; Significance: 5e-52; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 3 - 432
Target Start/End: Complemental strand, 133184 - 132765
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||| ||||||||    
T  133184 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagaaactcaacc 133088  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   ||||||||  |||||||||||| ||||||||||      ||  |||||||  |||||| | ||||||||||||||| | |||  || ||||  ||    
T  133087 ctaaagttccctcctttgtaatccaagtttctctctct------tt--aagctctcctccaaaatttgcacaagaacactt-atatagcagtcttcagct 132997  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||   ||||||| |||| |||||| ||| | ||||||||  | |||||| ||||||||| |||||  |||||||  | | ||||||  |||| |||| |     
T  132996 gataaaatcgtgccacgttttccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaa 132898  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||| |||||||||| | ||| |||||||||||||||| ||| |||||||||||||||||||| ||  |||||||| |||||| ||| | ||||||||||    
T  132897 aatcatgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacg 132798  T
Q  400 atttctctgttcttccagaccacaaatttgaag 432  Q
    ||||||||||||||||| |||||||||||||||    
T  132797 atttctctgttcttccaaaccacaaatttgaag 132765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 6255 - 6302
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6255 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 3063 - 3110
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  3063 tcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaat 3110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 149607 - 149658
Alignment:
Q  393 tgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  149607 tgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 149658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 5888 - 6011
Alignment:
Q  14 gatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaaccctttggttccc 113  Q
    |||||||||||||||||| || |||||||| |||||| ||||||||  |||  ||||||||| ||  ||| |||||||||||||||||| |   ||| ||    
T  5888 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatg--tttgccaacccaagagatcctcactacaaagacactcaaccataaagttacc 5984  T
Q  114 tcaattgtaatccaagattctctctct 140  Q
    ||  |||||||||||  ||||||||||    
T  5985 tcctttgtaatccaattttctctctct 6011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 92; Significance: 3e-44; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 169 - 444
Target Start/End: Original strand, 669 - 945
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    ||||||||||||  || |||| || | ||| |||||| ||||||||||||||||||  ||||| | ||||||| |||    |  |||| || ||||||||    
T  669 gcacaagaacacaatatataccagtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggaaccaaagt-tgaccagt 767  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacacca 365  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||| || ||||||  | |||||| ||||     
T  768 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacc- 866  T
Q  366 tgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |  |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  867 tccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaatttcaaca 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 91; Significance: 1e-43; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 322 - 436
Target Start/End: Complemental strand, 8034 - 7920
Alignment:
Q  322 atcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacca 421  Q
    ||||||||||||||||||||||||||||||| |||||| || ||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8034 atcgtgtcacgatttggcaccctgcaaaccaactcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagacca 7935  T
Q  422 caaatttgaagccaa 436  Q
    |||||||||||||||    
T  7934 caaatttgaagccaa 7920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 8322 - 8188
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    ||||||||||  ||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||    
T  8322 aggaagcttttaatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 8226  T
Q  103 ctttggttccctcaattgtaatccaagattctctctct 140  Q
    ||   ||||||||  |||||||||||| ||||||||||    
T  8225 ctaaagttccctcctttgtaatccaagtttctctctct 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 85; Significance: 4e-40; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 3 - 436
Target Start/End: Complemental strand, 43866 - 43443
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||  | ||||||||  ||  ||| ||||||||||||||||||    
T  43866 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaaaagatcctcactacaaagacactcaacc 43770  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttccaaa-tctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   ||| ||||  |||||||||||| ||||||||||       |||| |||||  |||||| ||||||||| ||||||| | |||  ||  |||  ||    
T  43769 ctaaagttacctcctttgtaatccaagtttctctctct-------tcca-gctctcctccaaaatctgcacaaaaacactt-atatagcagtattcagct 43679  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||   ||||||| |||| |||||| ||| |  |||||||  | | |||| ||||||||| |||||  |||||||  | | ||||||  |||| |||| |     
T  43678 gataaaatcgtgccacgttttccaaatcgtgccacgattgatacatacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaa 43580  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    |||| |||||||||||| ||| |||||  ||||||||| ||||||| ||||||||||||||||  |  ||||||||||||||||||| | ||||||||||    
T  43579 aatcatgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcacgacattacaaaatcgtgtcacgatgccacaatcgtgtcacg 43480  T
Q  400 atttctctgttcttccagaccacaaatttgaagccaa 436  Q
    |||||||| |||||||| |||| ||||||||||||||    
T  43479 atttctctattcttccaaaccataaatttgaagccaa 43443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 3 - 362
Target Start/End: Complemental strand, 36737 - 36388
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||| |||||||||||| |  |||||||| ||  ||| ||||||||||||||||||    
T  36737 aggaagcttttgatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgttttcc--aacccaagagatcctcactacaaagacactcaacc 36641  T
Q  103 ctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctct-tttccaaatctgcacaagaacactttaaatactagccttcctct 201  Q
    ||   ||| ||||  |||||||||||| |||||||||        | ||||||||  ||| |||||||||||||||||||||  |||  || ||||  ||    
T  36640 ctaaagttacctcctttgtaatccaagtttctctctc--------ttcaagctctccttcaaaatctgcacaagaacacttt-tatagcagtcttcagct 36550  T
Q  202 gaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcac 299  Q
    ||   ||||||| |||| |||||| ||| |  || ||||  |||||||| ||||||||| |||||  |||||||  | | || ||   |||| |||| |     
T  36549 gataaaatcgtgccacgttttccaaatcgtgccatgattggtgcgtacgacccaaggtacgacca-accttatcctgaaaacgtacccagcaagtttgaa 36451  T
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
    ||| |||||||| |||| ||| |||||| ||||||||| ||||||||||||||||||||||||    
T  36450 aattgtgtcacgttttcacaaaatcgtgccacgatttgacaccctgcaaaccagctcacgaca 36388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 36384 - 36332
Alignment:
Q  385 caaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |||| |||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaat 36332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 300 - 432
Target Start/End: Complemental strand, 1228 - 1096
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacg 399  Q
    ||||||||||||||||| ||| |||||  ||||||||| |||||||||||||| ||||||| |  |  ||||||||||||||||||||| ||||||||||    
T  1228 aatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacg 1129  T
Q  400 atttctctgttcttccagaccacaaatttgaag 432  Q
    |||| ||||||||| || |||||||||||||||    
T  1128 atttttctgttctttcaaaccacaaatttgaag 1096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 369 - 444
Target Start/End: Complemental strand, 1784 - 1709
Alignment:
Q  369 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 2015 - 1746
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||| ||||||| | | | |||||| ||||||||||||||||||  ||||| | ||||||| |||    |||||||||| ||||||||    
T  2015 gcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggt-tgaccagt 1917  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac-gacacc 364  Q
    ||||||||  || ||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   |||||| | | ||    
T  1916 ccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctcc 1817  T
Q  365 atgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
      |  |||||||||||| ||||||| ||||| ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  1816 ccg--atcgtgtcacgattgccaaa-tcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 148720 - 148451
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||| ||||||| | | | |||||| ||||||||||||||||||  ||||| | ||||||| |||    |||||||||| ||||||||    
T  148720 gcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggt-tgaccagt 148622  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac-gacacc 364  Q
    ||||||||  || ||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||   |||||| | | ||    
T  148621 ccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctcc 148522  T
Q  365 atgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
      |  |||||||||||| ||||||| ||||| ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  148521 ccg--atcgtgtcacgattgccaaa-tcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 148451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 18940 - 18671
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||| ||| | | | |||||| ||||||| ||||||||||  ||||| | |||||||||||    ||||| ||| |||||||||    
T  18940 gcacaagaacactttaaatattagtcctgccctgaagaaatcgtgccacgatttccttagatcgtgtcacgatttgcaacggtccccagg-atgaccagt 18842  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacacca 365  Q
    | ||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||  |||||||  | |      
T  18841 ctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgc-ctc 18743  T
Q  366 tgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
    |   |||||||||||| ||||||| ||| | ||||||| ||||||||| ||| ||||||||||||||||||||    
T  18742 tccgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaat 18671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 169 - 437
Target Start/End: Complemental strand, 14060 - 13791
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | |   |||| | ||||||| ||||||||||  ||||| | ||||||| |||    ||||| | || ||||||||    
T  14060 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagt-tgaccagt 13962  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac-gacacc 364  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||  ||||||| | | ||    
T  13961 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctcc 13862  T
Q  365 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 437  Q
     ||  ||||||||||||   |||| ||||| ||||||| ||||||||| ||| ||||| ||||||||| ||||    
T  13861 ctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 13791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 250 - 444
Target Start/End: Original strand, 8099 - 8273
Alignment:
Q  250 cccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||| |||| |||||||||||  ||||||||| ||||| |||||  |||||||||||||||| ||||||||||| |||||||||||  ||||||||    
T  8099 cccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaa 8197  T
Q  350 ccagctcacgacaccatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 444  Q
    | |||||||| |  | |||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8198 ctagctcacggccacttgaaatcgt-------------------gtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 61; Significance: 9e-26; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 3 - 362
Target Start/End: Original strand, 45390 - 45740
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctac-aaagacactcaac 101  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||| ||||||||  |||| ||||||||| ||  ||| |||| ||||||| |||||    
T  45390 aggaagcttttgatccttccaatggtgaaat-ctcactacccaaggtgtttacaatg--tttcacaacccaagagatcctcactacaaaagacattcaac 45486  T
Q  102 cctttggttccctcaattgtaatccaagattctctctctaagctcttccaagctcttttcc-aaatctgcacaagaacactttaaatactagccttcctc 200  Q
    |||   ||| ||||  |||||||||||| |||||||||        | ||||||||||||| |||| ||||||||||||| |||||||| |  ||||  |    
T  45487 cctaaagttacctcctttgtaatccaagtttctctctc--------ttcaagctcttttccaaaatttgcacaagaacac-ttaaataccaatcttcagc 45577  T
Q  201 tgaagcaatcgtgtcacgatttccagatcttttcacgatt--tgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaatgagcatgtttca 298  Q
    |||   ||||||| |||| |||||| ||| | ||||||||  |  ||||| ||||||||| |||||  |||||||  | | |||||   |||| |||| |    
T  45578 tgataaaatcgtgccacgttttccaaatcgtgtcacgattgatatgtacgacccaaggtacgacca-accttatcctgaaaacttagccagcaagtttga 45676  T
Q  299 caatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgaca 362  Q
     ||||||||||||||||| ||  |||||| ||||||||| ||||||||||| ||||||||||||    
T  45677 aaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaatcagctcacgaca 45740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 45751 - 45795
Alignment:
Q  392 gtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 436  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  45751 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 45795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 169 - 445
Target Start/End: Complemental strand, 176726 - 176449
Alignment:
Q  169 gcacaagaacactttaaatactagccttcctctgaagcaatcgtgtcacgatttcc--agatcttttcacgatttgcgtacgtcccaaggtatgaccagt 266  Q
    |||||||||||||||||||||||| | |   |||| | ||||||| ||||||||||  ||||| | ||||||| |||    | ||||| || ||||||||    
T  176726 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaagt-tgaccagt 176628  T
Q  267 ccttatcaaggatacttaatgagcatgtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac-gacacc 364  Q
    ||||||||  |||||||||  |||| |||||  |||||||||||||||||||||||||||| |||||||| ||  || ||||||  ||||||| | | ||    
T  176627 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctcc 176528  T
Q  365 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 445  Q
     ||  ||||||||||||   |||| ||||| ||||||| ||||||||| ||| ||||| ||||||||| ||||| ||||||    
T  176527 ctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaataccaacag 176449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 85875 - 86006
Alignment:
Q  3 aggaagctttagatccttccaatggtgaactcctcactacctaaggtgattacaatgtttttctcaacccaagtgactctctctacaaagacactcaacc 102  Q
    |||||| ||| |||||||||||||||||| || |||||||| || ||| |||||||||||  | ||||||||| ||  ||| ||||||||||||||||||    
T  85875 aggaagtttttgatccttccaatggtgaaatc-tcactacccaaagtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 85971  T
Q  103 ctttggttccctcaattgtaatccaagattctctc 137  Q
    ||   ||| ||||  |||||||||||| |||||||    
T  85972 ctaaagttacctcctttgtaatccaagtttctctc 86006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 439
Target Start/End: Original strand, 86156 - 86206
Alignment:
Q  390 tcgtgtcacgatttctctgttcttccagaccac-aaatttgaagccaatat 439  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  86156 tcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaatat 86206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 20861 - 20924
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacgaca 362  Q
    |||||||||||| |||||||| ||||||||| |||| | ||||||||||| || ||||||||||    
T  20861 aatcgtgtcacgttttcccaaaatcgtgtcatgattggacaccctgcaaaacatgctcacgaca 20924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 434253 - 434218
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatt 335  Q
    ||||||||||||||||||||| ||||||||||||||    
T  434253 aatcgtgtcacgatttcccaaaatcgtgtcacgatt 434218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 17710 - 17759
Alignment:
Q  300 aatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 349  Q
    |||||||||||| |||||||| ||||||||||| || | |||||||||||    
T  17710 aatcgtgtcacgttttcccaaaatcgtgtcacggttggacaccctgcaaa 17759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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