View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19434_low_31 (Length: 201)
Name: NF19434_low_31
Description: NF19434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19434_low_31 |
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Alignment Details
Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 32244450 - 32244534
Alignment:
| Q |
1 |
tgaatgagaacaaatgtatatggcatgggatggtcccatgcattctgcgtcgattctttacatgttgatatcattacttcttttt |
85 |
Q |
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| T |
32244450 |
tgaatgagaacaaatgtatatggcatgggatggtcccatgcattctgcgtcgattctttacatgttgatatcattacttcttttt |
32244534 |
T |
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Target: chr1; HSP #2
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 32250159 - 32250243
Alignment:
| Q |
1 |
tgaatgagaacaaatgtatatggcatgggatggtcccatgcattctgcgtcgattctttacatgttgatatcattacttcttttt |
85 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32250159 |
tgaatgagaacaaatatatatggcatgggatggtcccatgcattctgcgtcgattctttacatgttgatatcattacttcttttt |
32250243 |
T |
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