View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19438_high_63 (Length: 227)
Name: NF19438_high_63
Description: NF19438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19438_high_63 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 11757089 - 11757309
Alignment:
| Q |
1 |
catagtatctctctcctttggccagagagcaatgttttttataagcnnnnnnnntgtaaacttttatatttatgctatttttccaggcattcgtggtatt |
100 |
Q |
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| T |
11757089 |
catagtatctctctcctttggccagagagcaatgttttttataagcaaaaaaaatgtaaacttttatatttatgctatttttccaggcattcgtggtatt |
11757188 |
T |
|
| Q |
101 |
tgcaagatgtcctgtactcctgtttgtcataatatattgattattgataattaatttgccttctaaaaaagagagagtggggttagaggacagcaaaatt |
200 |
Q |
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||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
11757189 |
tgcaagatgtcttgtactcctgtttgttataatatattgattattgataattaatttgccttctaaaaaagaaagagtggggttagaggacagcaaaatt |
11757288 |
T |
|
| Q |
201 |
acgttggaaatgcgtgattat |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
11757289 |
acgttggaaatgcgtgattat |
11757309 |
T |
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