View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19438_low_15 (Length: 428)

Name: NF19438_low_15
Description: NF19438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19438_low_15
NF19438_low_15
[»] chr5 (21 HSPs)
chr5 (89-428)||(24026180-24026531)
chr5 (15-83)||(9742383-9742451)
chr5 (15-84)||(1274357-1274425)
chr5 (15-84)||(13089785-13089854)
chr5 (15-83)||(21155987-21156055)
chr5 (17-84)||(8920077-8920144)
chr5 (15-82)||(10649436-10649503)
chr5 (17-84)||(18695317-18695384)
chr5 (15-81)||(20270572-20270638)
chr5 (17-83)||(21922150-21922216)
chr5 (15-84)||(4088442-4088511)
chr5 (15-80)||(7287193-7287258)
chr5 (15-84)||(8897381-8897449)
chr5 (15-84)||(30640789-30640858)
chr5 (15-84)||(35075579-35075648)
chr5 (15-83)||(6517712-6517780)
chr5 (15-83)||(12779610-12779677)
chr5 (15-83)||(16690499-16690567)
chr5 (15-83)||(22098255-22098323)
chr5 (15-83)||(28306136-28306203)
chr5 (15-83)||(38293362-38293430)
[»] chr7 (19 HSPs)
chr7 (15-84)||(35600670-35600739)
chr7 (15-85)||(36703875-36703945)
chr7 (15-84)||(17945067-17945135)
chr7 (15-84)||(45815259-45815328)
chr7 (15-75)||(33776367-33776427)
chr7 (24-83)||(38656535-38656594)
chr7 (17-84)||(37899322-37899389)
chr7 (16-81)||(35098708-35098772)
chr7 (15-84)||(41893914-41893983)
chr7 (16-84)||(47448825-47448893)
chr7 (17-84)||(12007191-12007258)
chr7 (17-84)||(37899218-37899285)
chr7 (15-82)||(38340386-38340453)
chr7 (15-84)||(13152592-13152660)
chr7 (15-84)||(19426579-19426647)
chr7 (49-82)||(22816951-22816984)
chr7 (23-84)||(33845041-33845102)
chr7 (15-80)||(38259066-38259131)
chr7 (15-83)||(22638887-22638955)
[»] chr4 (13 HSPs)
chr4 (15-84)||(24509391-24509460)
chr4 (15-84)||(21025600-21025669)
chr4 (15-84)||(54669586-54669655)
chr4 (15-82)||(26909375-26909442)
chr4 (17-82)||(2401611-2401676)
chr4 (15-84)||(10994156-10994224)
chr4 (17-84)||(51255745-51255812)
chr4 (15-85)||(11012139-11012208)
chr4 (15-84)||(5249867-5249936)
chr4 (15-84)||(50721748-50721817)
chr4 (15-84)||(55609169-55609237)
chr4 (15-83)||(5622458-5622525)
chr4 (15-83)||(5932767-5932835)
[»] chr3 (23 HSPs)
chr3 (15-84)||(48152289-48152358)
chr3 (15-83)||(536279-536347)
chr3 (15-80)||(29030810-29030875)
chr3 (15-84)||(41670585-41670654)
chr3 (15-84)||(21196123-21196192)
chr3 (22-84)||(35272026-35272087)
chr3 (15-84)||(48405409-48405478)
chr3 (16-84)||(10811134-10811202)
chr3 (15-79)||(45693750-45693814)
chr3 (50-84)||(23770769-23770803)
chr3 (17-83)||(29573361-29573427)
chr3 (23-85)||(32362931-32362993)
chr3 (50-84)||(37035552-37035586)
chr3 (15-84)||(16479631-16479699)
chr3 (15-84)||(37894246-37894315)
chr3 (15-84)||(49196695-49196763)
chr3 (15-84)||(50559215-50559284)
chr3 (15-83)||(14207261-14207329)
chr3 (15-83)||(14215009-14215077)
chr3 (15-83)||(16969570-16969637)
chr3 (20-84)||(48346825-48346889)
chr3 (15-83)||(51464276-51464343)
chr3 (15-83)||(55399999-55400067)
[»] chr1 (29 HSPs)
chr1 (15-84)||(49660178-49660247)
chr1 (15-84)||(11037182-11037249)
chr1 (15-84)||(43560203-43560272)
chr1 (17-84)||(33070601-33070668)
chr1 (31-80)||(39712381-39712430)
chr1 (15-82)||(9897565-9897632)
chr1 (15-84)||(9566964-9567033)
chr1 (15-84)||(9987950-9988019)
chr1 (15-84)||(11947794-11947863)
chr1 (15-84)||(37516523-37516592)
chr1 (15-84)||(49446801-49446870)
chr1 (17-84)||(46911292-46911359)
chr1 (17-84)||(48983673-48983740)
chr1 (17-83)||(44789148-44789214)
chr1 (15-84)||(10890049-10890118)
chr1 (15-84)||(15705065-15705134)
chr1 (15-84)||(21433404-21433473)
chr1 (17-82)||(30658853-30658918)
chr1 (15-84)||(34254354-34254423)
chr1 (15-84)||(37619543-37619611)
chr1 (15-84)||(48858822-48858891)
chr1 (50-83)||(50239191-50239224)
chr1 (15-84)||(52362481-52362550)
chr1 (15-83)||(649768-649836)
chr1 (15-83)||(3159376-3159443)
chr1 (16-84)||(4213071-4213139)
chr1 (15-83)||(13489662-13489730)
chr1 (15-83)||(23645411-23645478)
chr1 (15-83)||(47642610-47642678)
[»] scaffold0416 (1 HSPs)
scaffold0416 (15-80)||(6861-6926)
[»] chr6 (8 HSPs)
chr6 (15-83)||(10335550-10335618)
chr6 (15-83)||(6531186-6531254)
chr6 (32-80)||(10826504-10826552)
chr6 (17-84)||(33421759-33421826)
chr6 (15-84)||(9954547-9954615)
chr6 (15-84)||(17551382-17551451)
chr6 (15-84)||(20822871-20822940)
chr6 (24-83)||(4922741-4922801)
[»] chr2 (11 HSPs)
chr2 (15-83)||(10833649-10833717)
chr2 (15-84)||(13711370-13711439)
chr2 (15-83)||(9048405-9048473)
chr2 (15-83)||(8293229-8293297)
chr2 (17-84)||(39449122-39449189)
chr2 (22-84)||(31296856-31296917)
chr2 (17-83)||(34134776-34134842)
chr2 (15-84)||(2308326-2308394)
chr2 (15-84)||(36132973-36133041)
chr2 (16-80)||(2563707-2563771)
chr2 (15-83)||(6999071-6999139)
[»] chr8 (20 HSPs)
chr8 (15-76)||(39692302-39692363)
chr8 (15-84)||(4658266-4658335)
chr8 (15-84)||(44086516-44086585)
chr8 (15-83)||(6849265-6849332)
chr8 (15-83)||(25987790-25987858)
chr8 (17-84)||(3946239-3946306)
chr8 (17-83)||(29991412-29991478)
chr8 (15-84)||(2621784-2621853)
chr8 (15-84)||(6161947-6162015)
chr8 (15-84)||(33100472-33100541)
chr8 (15-80)||(33279552-33279617)
chr8 (15-84)||(43285966-43286035)
chr8 (15-83)||(7598708-7598776)
chr8 (15-83)||(21273714-21273781)
chr8 (15-63)||(23793093-23793141)
chr8 (15-83)||(25830249-25830317)
chr8 (15-83)||(26026896-26026964)
chr8 (15-83)||(34718115-34718183)
chr8 (22-82)||(40528749-40528809)
chr8 (36-80)||(43632360-43632404)
[»] scaffold0532 (1 HSPs)
scaffold0532 (15-83)||(10964-11032)
[»] scaffold0432 (1 HSPs)
scaffold0432 (16-84)||(6524-6592)
[»] scaffold0178 (1 HSPs)
scaffold0178 (15-83)||(9776-9844)
[»] scaffold0034 (1 HSPs)
scaffold0034 (16-84)||(101910-101978)


Alignment Details
Target: chr5 (Bit Score: 268; Significance: 1e-149; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 89 - 428
Target Start/End: Complemental strand, 24026531 - 24026180
Alignment:
Q  89 ttgttttgctagtcaaacacactttttaaaggcaaaaatgattgtttattcaaataaccagtttgg-tcatacttgccatatcatcctgttaattgcaac 187  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  24026531 ttgttttgctagtcaaacacactttttaaaggcaaaaattattgtttattcaaataaacagtttgggtcatacttgccatatcatcctgttaattgcaac 24026432  T
Q  188 atcacacaacatcgtgaatcccattggtcaagaccagtccatgtaagctgcatatgcgtcacaacttccaaatatcctctacacgcgcctcc-ttgttcn 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||     
T  24026431 atcacacaacatcgtgaatcccattggtcaagaccagtccatgtaagctgcatatgcgtcacaacttccaaatatcctctacacgcgccccccttgttct 24026332  T
Q  287 nnnnnnaaaccaacacaaacttaatttatcaatctacctcccaagaaacccaaaccctgtttccccataaaaacattacctaaaccaaaagcaagag--- 383  Q
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  24026331 ttttttaaaccaacacaaacttaatttatcaatctacctcccaagaaacccaaaccctgtttccccataaaaacattacctaaaccaaaagcaagagaca 24026232  T
Q  384 -------accaaattgaaaccatatcagatctagcaacaacagtgtcttatt 428  Q
           |||||||||||||||||||||||||||||||||||||||||||||    
T  24026231 aaactgcaccaaattgaaaccatatcagatctagcaacaacagtgtcttatt 24026180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 9742383 - 9742451
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| |||| ||||||||| |||  |||||||||||||||| |||||||||||||||||    
T  9742383 taatgtgagtatgagagatgaagttgtcagataacttgtcacaaaatggttgtcaaaatatcatttctc 9742451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 1274425 - 1274357
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| |||||||||||||||||||||||| | ||||||| ||||||||| |  |||||||||||||||    
T  1274425 taatgtgagtatgaaagataaagttgtcacaaaagttgtca-aaaatggttgttcaaatatcatttctct 1274357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 13089785 - 13089854
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||||||| |||||||||||| | ||||||| ||||||||| |  |||||||||||||||    
T  13089785 taatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 13089854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 21156055 - 21155987
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||||||| |||| ||||||| | ||||||| ||||||||| |  ||||||||||||||    
T  21156055 taatgtgagtatgaaagagaaaggtgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 21155987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 8920144 - 8920077
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||| ||| |||||||||||| | ||||||||||||||| | |  |||||||||||||||    
T  8920144 atgtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctct 8920077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 10649503 - 10649436
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttct 82  Q
    |||||| ||||||||||| |||||||||||| | ||||||| ||||||| | |  |||||||||||||    
T  10649503 taatgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttct 10649436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 18695384 - 18695317
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||| ||| |||||||||||| | ||||| ||||||||||| |  |||||||||||||||    
T  18695384 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctct 18695317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 20270638 - 20270572
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttc 81  Q
    |||||| ||||||| ||||||||||||| |||  ||||||| ||||| |||||  ||||||||||||    
T  20270638 taatgtgagtatgagagataaagttgtcccattagttgtcataaaatagttttacaaatatcatttc 20270572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 21922150 - 21922216
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||| ||||||| ||| |||||||||||| | ||||||||||||||| | |  ||||||||||||||    
T  21922150 atgtgagtatgagagagaaagttgtcacaaacgttgtcacaaaatggatgttcaaatatcatttctc 21922216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 4088511 - 4088442
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||||||| |||||||||||| | ||||| | ||||||| | |  |||||||||||||||    
T  4088511 taatgtgagtatgaaagagaaagttgtcacaaaagttgttataaaatggatgtacaaatatcatttctct 4088442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 7287193 - 7287258
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcattt 80  Q
    |||||| ||||||||||| |||||||||||| | ||||| | ||||||||| |  |||||||||||    
T  7287193 taatgtgagtatgaaagagaaagttgtcacaaaagttgtaaaaaaatggttgtttaaatatcattt 7287258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 8897449 - 8897381
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||||||| | |||||||| | ||||||||| ||||||||| |  |||||||||||||||    
T  8897449 taatgtgagtatgaaagagagagttgtcaaa-aggttgtcataaaatggttgtacaaatatcatttctct 8897381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 30640858 - 30640789
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||| ||||| ||| |||||||| ||| | ||||||||||||||| | |  |||||||||||||||    
T  30640858 taatgtaaatatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctct 30640789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 35075579 - 35075648
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||||  ||||||| |||||| || |  |||||||||||||||    
T  35075579 taatgtgagtatgagagaaaaagttgtcacatcagttgtcaaaaaatgattgttcaaatatcatttctct 35075648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 6517780 - 6517712
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||| | |  ||||||||||||||    
T  6517780 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 6517712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 12779610 - 12779677
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| |||||||||||||| | | ||||||||||| ||||| |  ||||||||||||||    
T  12779610 taatgtgagtatgagagataaagttgtca-aaaagttgtcacaaattggttgtacaaatatcatttctc 12779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 16690567 - 16690499
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||||||| |||||||||||| | ||||| |  |||||||| |  ||||||||||||||    
T  16690567 taatgtgagtatgaaagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctc 16690499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 22098323 - 22098255
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||||| | ||||||||| |  ||||||||||||||    
T  22098323 taatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 22098255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 28306136 - 28306203
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| |||||||||||||||| | ||||| | ||||||||| |  ||||||||||||||    
T  28306136 taatgtgagtatgagagataaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctc 28306203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 38293362 - 38293430
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| |  |||| | ||||||||| | |||||||||||||||    
T  38293362 taatgtgagtatgatagagaaagttgtcacaaaaattgttataaaatggttgtaaaaatatcatttctc 38293430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 35600739 - 35600670
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  35600739 taatgtgagtatgaaagataaaattgtcacataggttgtcacaaaatggttgtcaaaatatcatttctct 35600670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 36703875 - 36703945
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctctc 85  Q
    |||||| ||||||| ||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  36703875 taatgtgagtatgagagataaaattgtcacatatgttgtcacaaaatggttgtcaaaatatcatttctctc 36703945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 17945135 - 17945067
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  17945135 taatgtgagtatgagagataaagttgtcacatag-ttgtcacaaaatggttgtcaaaatatcatttctct 17945067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 45815259 - 45815328
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  45815259 taatgtgagtatgagagataaagttgtcacatatattgtcacaaaatggttgtcaaaatatcatttctct 45815328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 33776427 - 33776367
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatat 75  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||    
T  33776427 taatgtgagtatgagagataaagttgtcatataggttgtcacaaaatggttgtcaaaatat 33776367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 38656594 - 38656535
Alignment:
Q  24 tatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    ||||| |||||||||||||| ||| ||| ||||||||||||| |||||||||||||||||    
T  38656594 tatgagagataaagttgtcaaataagttctcacaaaatggttgtcaaaatatcatttctc 38656535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 37899389 - 37899322
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||| |||||||||||||||| | ||||||||||||||| | |  |||||||||||||||    
T  37899389 atgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctct 37899322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 35098708 - 35098772
Alignment:
Q  16 aatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttc 81  Q
    ||||| ||||||||||| |||||||||||||| ||||||| ||||||||| |  ||||||||||||    
T  35098708 aatgtgagtatgaaagagaaagttgtcacata-gttgtcaaaaaatggttgttcaaatatcatttc 35098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 41893983 - 41893914
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||||||| |||||||||||| | ||||||| ||||||| | |  |||||||||||||||    
T  41893983 taatgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 41893914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 47448893 - 47448825
Alignment:
Q  16 aatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    ||||| ||||||| ||| |||||||||||| | ||||||| ||||||||| |  |||||||||||||||    
T  47448893 aatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 47448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 12007191 - 12007258
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||| ||| |||||||||||| | ||||||| ||||||||| |  |||||||||||||||    
T  12007191 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 12007258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 37899218 - 37899285
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||| ||| |||||||||||| |  |||||||||||||| | |  |||||||||||||||    
T  37899218 atgtaagtatgagagagaaagttgtcacaaaaattgtcacaaaatggatgttcaaatatcatttctct 37899285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 38340386 - 38340453
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttct 82  Q
    |||||| ||||||| |||||||||||||||| | ||||| | |||||| ||||  |||||||||||||    
T  38340386 taatgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgcttttacaaatatcatttct 38340453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 13152660 - 13152592
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||||| |  |||||||||||||||    
T  13152660 taatgtgagtatgagagagaaagttgtcacaaaagttgtca-aaaatggttgttcaaatatcatttctct 13152592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 19426647 - 19426579
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||| | || |||||||||||||||| |  |||||||||||||||    
T  19426647 taatgtgagtatgagagagaaagttgtcaaaaag-ttgtcacaaaatggttgtacaaatatcatttctct 19426579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 22816984 - 22816951
Alignment:
Q  49 gttgtcacaaaatggttttcaaaatatcatttct 82  Q
    ||||||||||||||||| ||||||||||||||||    
T  22816984 gttgtcacaaaatggttgtcaaaatatcatttct 22816951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 33845102 - 33845041
Alignment:
Q  23 gtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||| |||||||||||| | ||||||| ||| ||||| |  |||||||||||||||    
T  33845102 gtatgaaagagaaagttgtcacaaaagttgtcaaaaagtggttattcaaatatcatttctct 33845041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 38259131 - 38259066
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcattt 80  Q
    |||||| ||||||||||| |||||||||||| | ||| ||| ||||||||| |  |||||||||||    
T  38259131 taatgttagtatgaaagagaaagttgtcacaaaagttatcaaaaaatggttgtacaaatatcattt 38259066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 22638887 - 22638955
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||||||||||||||| ||| |||||||| | ||||||| ||||| | | |  ||||||||||||||    
T  22638887 taatgtaagtatgaaagagaaatttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctc 22638955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 24509391 - 24509460
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  24509391 taatgtgagtatgagagataaagttgtcacatagattgtcacaaaatggttgtcaaaatatcatttctct 24509460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 21025669 - 21025600
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| |||| || ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  21025669 taatgtgagtaagagagataaagttgtcacataaattgtcacaaaatggttgtcaaaatatcatttctct 21025600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 54669586 - 54669655
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    ||||||||||||||||||||||||||||| | | |||||||| |||||| | |  |||||||||||||||    
T  54669586 taatgtaagtatgaaagataaagttgtcataaaagttgtcaccaaatggatgttgaaatatcatttctct 54669655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 26909442 - 26909375
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttct 82  Q
    |||||| ||||||| |||||||||| |||||||| |||||||||||| |||   ||||||||||||||    
T  26909442 taatgtgagtatgagagataaagttctcacatagattgtcacaaaatagttgataaaatatcatttct 26909375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 2401676 - 2401611
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttct 82  Q
    |||| ||||||| |||||||||||||||| | ||||||||||||||| | |  |||||||||||||    
T  2401676 atgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttct 2401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 10994156 - 10994224
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| |||||||||||||| | || |||||||||||||||| |  |||||||||||||||    
T  10994156 taatgtgagtatgagagataaagttgtcaaa-agattgtcacaaaatggttgtacaaatatcatttctct 10994224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 51255812 - 51255745
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||| ||| |||||||||||| | ||||||| ||||||||| |  |||||||||||||||    
T  51255812 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 51255745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 11012208 - 11012139
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctctc 85  Q
    |||||||||||||| |||||||||||| | | | ||||||| ||||||||| |  ||||||||||||||||    
T  11012208 taatgtaagtatgagagataaagttgtta-aaaagttgtcataaaatggttgtacaaatatcatttctctc 11012139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 5249936 - 5249867
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| |||||||||    |||||||||||||||    
T  5249936 taatgtgagtatgagagagaaagttgtcacaaatgttgtcataaaatggttgcacaaatatcatttctct 5249867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 50721748 - 50721817
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||||||| |||||| ||||| | ||||||| ||| ||||| |  |||||||||||||||    
T  50721748 taatgtgagtatgaaagagaaagttatcacaaaagttgtcaaaaattggttgttcaaatatcatttctct 50721817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 55609169 - 55609237
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||| ||||||||||| |  |||||||||||||||    
T  55609169 taatgtgagtatgagagagaaagttgtcacaaaagttgt-acaaaatggttgtacaaatatcatttctct 55609237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 5622525 - 5622458
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||||||| |||||||||||| | ||||| | ||||||||| |  ||||||||||||||    
T  5622525 taatgtgagtatgaaagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctc 5622458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 5932767 - 5932835
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||| ||||| |  ||||||||||||||    
T  5932767 taatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctc 5932835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 7e-22; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 48152289 - 48152358
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  48152289 taatgtgagtatgagagataaagttgtcacatagattgtcacaaaatggttgtcaaaatatcatttctct 48152358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 536279 - 536347
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  536279 taatgtgagtgtgagagataaagttgtcacataggttgtcacaaaatggttgtcaaaatatcatttctc 536347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 29030810 - 29030875
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcattt 80  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  29030810 taatgtaagtatgagagataaagttgtcacctaggttgtcacaaaatgattgtcaaaatatcattt 29030875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 41670585 - 41670654
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||  |||||||||||||    
T  41670585 taatgtgagtatgagagataaagttgtcacctaggttgtcacaaaatggttgtcatgatatcatttctct 41670654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 21196192 - 21196123
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||||| ||| |||||||||||| | ||||||||||||||| | |  |||||||||||||||    
T  21196192 taatgtaagtatgagagagaaagttgtcacagaagttgtcacaaaatggatgttcaaatatcatttctct 21196123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 35272087 - 35272026
Alignment:
Q  22 agtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||||||||||||| | ||||||||||||| ||||| |  |||||||||||||||    
T  35272087 agtatgaaagataaagttgtcaaa-aggttgtcacaaagtggttgtacaaatatcatttctct 35272026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 48405478 - 48405409
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||| ||| | ||||||||||||||||| |  |||||||||||||||    
T  48405478 taatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttctct 48405409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 10811202 - 10811134
Alignment:
Q  16 aatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    ||||| ||||||| ||| |||||||||||| | ||||||| ||||||||| |  |||||||||||||||    
T  10811202 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgttcaaatatcatttctct 10811134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 45693814 - 45693750
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatt 79  Q
    |||||| | ||||| ||||||||||||||| ||  |||||||||||||||| |||| ||||||||    
T  45693814 taatgtgactatgagagataaagttgtcacctaaattgtcacaaaatggttgtcaagatatcatt 45693750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 23770769 - 23770803
Alignment:
Q  50 ttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||||||| ||||||||||||||||||    
T  23770769 ttgtcacaaaatggttgtcaaaatatcatttctct 23770803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 29573361 - 29573427
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||| ||||||| ||| |||||||||||| | ||||| ||||||||||| |  ||||||||||||||    
T  29573361 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 29573427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 32362993 - 32362931
Alignment:
Q  23 gtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctctc 85  Q
    |||||| |||||||||||||| | | ||||||| ||||||||| |  ||||||||||||||||    
T  32362993 gtatgagagataaagttgtcataaaagttgtcaaaaaatggttgttcaaatatcatttctctc 32362931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 37035552 - 37035586
Alignment:
Q  50 ttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||||||| ||||||||||||||||||    
T  37035552 ttgtcacaaaatggttgtcaaaatatcatttctct 37035586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 16479699 - 16479631
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||| ||||||||||| |  |||||||||||||||    
T  16479699 taatgtgagtatgagagagaaagttgtcacaaaagttgt-acaaaatggttgtacaaatatcatttctct 16479631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 37894246 - 37894315
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||| | ||||||||| |  |||||||||||||||    
T  37894246 taatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctct 37894315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 49196763 - 49196695
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| ||| |||||||| || |||||||||||||||| |  |||||||||||||||    
T  49196763 taatgtgagtatgagagagaaaattgtcacaaag-ttgtcacaaaatggttgtacaaatatcatttctct 49196695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 50559215 - 50559284
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||||| ||| ||| |||||||| | ||||||| ||||| ||| |  |||||||||||||||    
T  50559215 taatgtaagtatgagagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatcatttctct 50559284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 14207261 - 14207329
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||||| ||||||| ||| |  ||||||||||||||    
T  14207261 taatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttctc 14207329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 14215009 - 14215077
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||||| ||||||| ||| |  ||||||||||||||    
T  14215009 taatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttctc 14215077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 16969570 - 16969637
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||| | | ||||||| ||||||||| | |||||||||||||||    
T  16969570 taatgtgagtatgagagagaaagttgtcaaaaaagttgtca-aaaatggttgttaaaatatcatttctc 16969637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 48346889 - 48346825
Alignment:
Q  20 taagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    ||||||||||||| |||||||||||| | ||||||| |||||| || |  ||||||| |||||||    
T  48346889 taagtatgaaagagaaagttgtcacaaacgttgtcaaaaaatgattgttcaaatatcttttctct 48346825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 51464276 - 51464343
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| |||||||||||||| | | ||||||||||| ||||| |  ||||||||||||||    
T  51464276 taatgtgagtatgagagataaagttgtca-aaaagttgtcacaaagtggttgtacaaatatcatttctc 51464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 55400067 - 55399999
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||| | |  ||||||||||||||    
T  55400067 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 55399999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 49660247 - 49660178
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  49660247 taatgtgagtatgagagataaagttgtcacataggttgtcacaaaatggttgttaaaatatcatttctct 49660178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 11037249 - 11037182
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||||| |||||||||| |||||  |||||||||||||||||| ||||||||||||||||||    
T  11037249 taatgtaagtatgagagataaagttatcaca--ggttgtcacaaaatggttgtcaaaatatcatttctct 11037182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 43560272 - 43560203
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||    
T  43560272 taatgtgagtatgagagataaagttgtcacctagattgtcacaaaatggttgtgaaaatatcatttctct 43560203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 33070668 - 33070601
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||||| ||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  33070668 atgtgagtatgaaaaataaaattgtcacataagttgtcataaaatggttgtcaaaatatcatttctct 33070601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 39712430 - 39712381
Alignment:
Q  31 gataaagttgtcacataggttgtcacaaaatggttttcaaaatatcattt 80  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  39712430 gataaagttgtcacatagattatcacaaaatggttgtcaaaatatcattt 39712381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 9897565 - 9897632
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttct 82  Q
    |||||| ||||| |||||||||||||||||| | ||||||| ||||||||| |  |||||||||||||    
T  9897565 taatgtgagtattaaagataaagttgtcacaaaagttgtcaaaaaatggttctacaaatatcatttct 9897632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 9566964 - 9567033
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||||| |  |||||||||||||||    
T  9566964 taatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 9567033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 9988019 - 9987950
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||||||| |||||||||||| | ||||||| ||| ||||| |  |||||||||||||||    
T  9988019 taatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaattggttgttcaaatatcatttctct 9987950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 11947863 - 11947794
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||||| |  |||||||||||||||    
T  11947863 taatgtcagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgtacaaatatcatttctct 11947794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 37516592 - 37516523
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||||||| |||||| |||  |||| |||||||| || ||||||||||||||||||    
T  37516592 taatgtgagtatgagagataaaattgtcatataaattgttacaaaatgattgtcaaaatatcatttctct 37516523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 49446801 - 49446870
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||||| ||| |||||||||||| |  |||  |||||||||||||  |||||||||||||||    
T  49446801 taatgtaagtatgagagagaaagttgtcacaaaaattggtacaaaatggttttacaaatatcatttctct 49446870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 46911359 - 46911292
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||||||| |||||||| ||| | ||||||||||||||| | |  |||||||||||||||    
T  46911359 atgtgagtatgaaagaaaaagttgtaacaaaagttgtcacaaaatggatgttgaaatatcatttctct 46911292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 48983673 - 48983740
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||| ||| |||||||||||| | ||||||| ||||||||| |  |||||||||||||||    
T  48983673 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 48983740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 44789148 - 44789214
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||| ||||||||||| |||||||| ||| | ||||||||||||||| | |  ||||||||||||||    
T  44789148 atgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctc 44789214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 10890049 - 10890118
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||| | |  |||||||||||||||    
T  10890049 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 10890118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 15705065 - 15705134
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||| | |  |||||||||||||||    
T  15705065 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 15705134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 21433404 - 21433473
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||| | ||| |||||||||||| | ||||| ||||||||||| |  |||||||||||||||    
T  21433404 taatgtgagtataagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctct 21433473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 30658853 - 30658918
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttct 82  Q
    |||| ||||||||||| |||||||| ||| | ||||||||||||||| | |  |||||||||||||    
T  30658853 atgtgagtatgaaagaaaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttct 30658918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 34254354 - 34254423
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| |||||||||||||||| | ||||||| ||||||  | |  |||||||||||||||    
T  34254354 taatgtgagtatgagagataaagttgtcacagaagttgtcataaaatgaatgttcaaatatcatttctct 34254423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 37619611 - 37619543
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||| ||| ||||||||| || |||||||||||||||    
T  37619611 taatgtgagtatgagagagaaagttgtcacaaaagttatca-aaaatggttgtccaaatatcatttctct 37619543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 48858891 - 48858822
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||| ||||| |  |||||||||||||||    
T  48858891 taatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctct 48858822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 50239191 - 50239224
Alignment:
Q  50 ttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||||||||||||| |||||||||||||||||    
T  50239191 ttgtcacaaaatggttgtcaaaatatcatttctc 50239224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 52362550 - 52362481
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||| | |  |||||||||||||||    
T  52362550 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 52362481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 649836 - 649768
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||||| | ||||||||| |  ||||||||||||||    
T  649836 taatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttctc 649768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 3159443 - 3159376
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    ||||||||||| |||||| |||||||||||| | ||||| | ||||||||| |  ||||||||||||||    
T  3159443 taatgtaagtacgaaagaaaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctc 3159376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 4213139 - 4213071
Alignment:
Q  16 aatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    ||||| ||||||| ||| |||||||||||| | ||| ||| ||||||||| |  |||||||||||||||    
T  4213139 aatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctct 4213071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 13489730 - 13489662
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||| | |  ||||||||||||||    
T  13489730 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 13489662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 23645478 - 23645411
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| |||||||||||||| | | ||||| | ||||||||| || ||||||||||||||    
T  23645478 taatgtgagtatgagagataaagttgtcaaaaaagttgt-aaaaaatggttgtccaaatatcatttctc 23645411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 47642610 - 47642678
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||| ||| ||||||||| |  ||||||||||||||    
T  47642610 taatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctc 47642678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 6926 - 6861
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcattt 80  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  6926 taatgtgagtatgagagataaagttgtcacatagattgtcacaaaatggttgtcaaaatatcattt 6861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 10335618 - 10335550
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| |||||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  10335618 taatgtgagtatgagagataaagttgtcacataagtcgtcacaaaatggttgtcaaaatatcatttctc 10335550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 6531186 - 6531254
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| ||||||||| |||| ||||||||||||||| | |  ||||||||||||||    
T  6531186 taatgtgagtatgagagagaaagttgtcccataagttgtcacaaaatggatgttcaaatatcatttctc 6531254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 10826552 - 10826504
Alignment:
Q  32 ataaagttgtcacataggttgtcacaaaatggttttcaaaatatcattt 80  Q
    ||||| ||||||| || ||||||||||||||||| ||||||||||||||    
T  10826552 ataaaattgtcacttaagttgtcacaaaatggttatcaaaatatcattt 10826504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 33421826 - 33421759
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||||||| |||||||| ||| | ||||||||||||||| | |  |||||||||||||||    
T  33421826 atgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctct 33421759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 9954615 - 9954547
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||||| ||| |||||||||| | | ||||||||||| ||||| |  |||||||||||||||    
T  9954615 taatgtaagtatgagagagaaagttgtca-aaaagttgtcacaaattggttgtacaaatatcatttctct 9954547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 17551382 - 17551451
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||| ||| | ||||||| ||||||||| |  |||||||||||||||    
T  17551382 taatgtgagtatgagagagaaagttgttacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 17551451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 20822871 - 20822940
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||| | |  |||||||||||||||    
T  20822871 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 20822940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 4922741 - 4922801
Alignment:
Q  24 tatgaaagataaagttgtcacataggttgtcac-aaaatggttttcaaaatatcatttctc 83  Q
    |||||||||||||||||||| | |  ||||||| ||||  |||||||||||||||||||||    
T  4922741 tatgaaagataaagttgtcataaaaattgtcacaaaaaatgttttcaaaatatcatttctc 4922801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 10833649 - 10833717
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  10833649 taatgtgagtatgagagataaaattgtcacatagattgtcacaaaatggttgtcaaaatatcatttctc 10833717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 13711370 - 13711439
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| | ||||| ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  13711370 taatgtgaatatgagagataaagttgtcacgtaggttgtcacaaaatgggtgtcaaaatatcatttctct 13711439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 9048405 - 9048473
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| | ||||| |||||||||||| |||||| || ||||||||||||| |||||||||||||||||    
T  9048405 taatgtgaatatgagagataaagttgttacatagattatcacaaaatggttgtcaaaatatcatttctc 9048473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 8293297 - 8293229
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||| ||| |||||||||| |||||  || ||||||||| ||| |||||||||||||||||    
T  8293297 taatgtgagtataaaaaataaagttgttacataaattatcacaaaatagttgtcaaaatatcatttctc 8293229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 39449122 - 39449189
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||||||| |||||||| ||| | ||||||||||||||| | |  |||||||||||||||    
T  39449122 atgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctct 39449189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 31296856 - 31296917
Alignment:
Q  22 agtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    ||||||| |||||||||||||| | | ||||||||||||||||| |  |||||||||||||||    
T  31296856 agtatgagagataaagttgtcaaa-acgttgtcacaaaatggttgtacaaatatcatttctct 31296917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 34134776 - 34134842
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||| ||||||| ||| |||||||||| | | ||||| ||||||||||| | |||||||||||||||    
T  34134776 atgtcagtatgagagagaaagttgtcagaaaagttgttacaaaatggttgtaaaaatatcatttctc 34134842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 2308326 - 2308394
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| |||||||||||||| | ||||||||| ||| ||||| |  |||||||||||||||    
T  2308326 taatgtgagtatgagagataaagttgtca-aaaggttgtcaaaaattggttgtacaaatatcatttctct 2308394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 36133041 - 36132973
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| |||||||||||||||| |  |||||||||| ||||| |  |||||||||||||||    
T  36133041 taatgtgagtatgagagataaagttgtcaca-aaattgtcacaaagtggttgtacaaatatcatttctct 36132973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 2563771 - 2563707
Alignment:
Q  16 aatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcattt 80  Q
    ||||||||||||| ||| |||||||||||| | ||||||| ||||||| | |  |||||||||||    
T  2563771 aatgtaagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 2563707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 6999071 - 6999139
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||||||| ||||||| | |  ||||||||||||||    
T  6999071 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 6999139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 39692363 - 39692302
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatc 76  Q
    |||||| | ||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39692363 taatgtgattatgagagataaagttgtcacataggttgtcacaaaatggttgtcaaaatatc 39692302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 4658266 - 4658335
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||||| ||| |||||||||||| | ||||||| ||||||| | |  |||||||||||||||    
T  4658266 taatgtaagtatgagagaaaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 4658335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 44086516 - 44086585
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||||||| | | |||||||| | ||||||||| |||||| ||||  |||||||||||||||    
T  44086516 taatgtaagtatgaaaaagagagttgtcaaaaaggttgtcataaaatgattttacaaatatcatttctct 44086585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 6849265 - 6849332
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| |||||||||||||||||||||  | | ||||||||||||||||| |  ||||||||||||||    
T  6849265 taatgtgagtatgaaagataaagttgtc-taaaagttgtcacaaaatggttgtataaatatcatttctc 6849332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 25987790 - 25987858
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| |||||||||||||||| | ||||| | ||||||||| |  ||||||||||||||    
T  25987790 taatgtgagtatgagagataaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttctc 25987858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 3946306 - 3946239
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||| ||||||| ||| |||||||||||| | ||||||||||||||| | |  |||||||||||||||    
T  3946306 atgtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctct 3946239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 29991478 - 29991412
Alignment:
Q  17 atgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||| ||||||||||| |||||||| ||| | ||||||||||||||| | |  ||||||||||||||    
T  29991478 atgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctc 29991412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 2621853 - 2621784
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||||||||| | |||||||||||||||| | ||| ||||||| | ||| |  |||||||||||||||    
T  2621853 taatgtaagtataagagataaagttgtcacaaaagttatcacaaattagttgtataaatatcatttctct 2621784  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 6162015 - 6161947
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||||||| | |||||||| | ||||||||| ||||||||| |  |||||||||||||||    
T  6162015 taatgtgagtatgaaagagagagttgtcaaa-aggttgtcataaaatggttgtacaaatatcatttctct 6161947  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 33100472 - 33100541
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||||| | ||||||||| |  |||||||||||||||    
T  33100472 taatgtgagtatgagagagaaagttgtcacaaaagttgttataaaatggttgttcaaatatcatttctct 33100541  T

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Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 33279552 - 33279617
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcattt 80  Q
    |||||||||||||| |||||||||||||||| | ||||| |  |||||||| |  |||||||||||    
T  33279552 taatgtaagtatgagagataaagttgtcacaaaagttgttaagaaatggttgtacaaatatcattt 33279617  T

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Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 43285966 - 43286035
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    |||||| ||||||| ||| |||||||||||| | ||| | | ||||||||| || |||||||||||||||    
T  43285966 taatgtgagtatgagagagaaagttgtcacaaaagttattagaaaatggttgtccaaatatcatttctct 43286035  T

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Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 7598776 - 7598708
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| ||||| |||||| | ||||||| ||||||||| |  ||||||||||||||    
T  7598776 taatgtgagtatgagagagaaagtggtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 7598708  T

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Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 21273714 - 21273781
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||||||| |||||| | | ||||||||||||||||| |  ||||||||||||||    
T  21273714 taatgtgagtatgagagataaaattgtca-agaagttgtcacaaaatggttgtacaaatatcatttctc 21273781  T

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Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 23793093 - 23793141
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatgg 63  Q
    |||||| ||||||| ||| || ||||||||||| |||||||||||||||    
T  23793093 taatgtgagtatgagagagaatgttgtcacataagttgtcacaaaatgg 23793141  T

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Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 25830249 - 25830317
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | ||||| | ||||||||| |  ||||||||||||||    
T  25830249 taatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 25830317  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 26026964 - 26026896
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| | | |||||||||||| | ||||||| ||||||||| |  ||||||||||||||    
T  26026964 taatgtgagtatgagaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 26026896  T

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Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 34718183 - 34718115
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||| ||| | ||||||||||||||| | |  ||||||||||||||    
T  34718183 taatgtgagtatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctc 34718115  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 40528809 - 40528749
Alignment:
Q  22 agtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttct 82  Q
    ||||||||||| |||||||||| | | ||||||||||||| ||| |  |||||||||||||    
T  40528809 agtatgaaagagaaagttgtcataaaagttgtcacaaaatagttgttcaaatatcatttct 40528749  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 43632360 - 43632404
Alignment:
Q  36 agttgtcacataggttgtcacaaaatggttttcaaaatatcattt 80  Q
    |||||||||||| ||||||| |||||||||||  |||||||||||    
T  43632360 agttgtcacataagttgtcaaaaaatggttttacaaatatcattt 43632404  T

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Target: scaffold0532 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 11032 - 10964
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||| ||||||| ||| |||||||||||| | |||||| |||||||| | |  ||||||||||||||    
T  11032 taatgtgagtatgagagagaaagttgtcacaaaagttgtcccaaaatggatgttcaaatatcatttctc 10964  T

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Target: scaffold0432 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 6524 - 6592
Alignment:
Q  16 aatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    ||||| ||||||| |||||||||||||||| | ||||| | |||||| || |  |||||||||||||||    
T  6524 aatgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgattgttcaaatatcatttctct 6592  T

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Target: scaffold0178 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 9844 - 9776
Alignment:
Q  15 taatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctc 83  Q
    |||||||||||||||||| |||||||||||| |  || | | ||||||||| |  ||||||||||||||    
T  9844 taatgtaagtatgaaagagaaagttgtcacaaaaattataaaaaaatggttgtacaaatatcatttctc 9776  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 101910 - 101978
Alignment:
Q  16 aatgtaagtatgaaagataaagttgtcacataggttgtcacaaaatggttttcaaaatatcatttctct 84  Q
    ||||| ||||||| ||| |||||||||||| | ||||||| ||||||||| |  | |||||||||||||    
T  101910 aatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcagatatcatttctct 101978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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