View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19438_low_34 (Length: 320)

Name: NF19438_low_34
Description: NF19438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19438_low_34
NF19438_low_34
[»] chr5 (68 HSPs)
chr5 (1-159)||(2024834-2024996)
chr5 (1-197)||(15639162-15639360)
chr5 (1-127)||(2411870-2411995)
chr5 (1-85)||(40794519-40794604)
chr5 (1-111)||(26719090-26719200)
chr5 (1-111)||(26988834-26988944)
chr5 (1-86)||(34307328-34307414)
chr5 (1-55)||(24395590-24395644)
chr5 (1-120)||(10543471-10543588)
chr5 (1-193)||(11242512-11242708)
chr5 (1-47)||(14318578-14318624)
chr5 (279-319)||(36177876-36177917)
chr5 (281-320)||(292264-292304)
chr5 (34-100)||(606140-606208)
chr5 (281-320)||(3971729-3971769)
chr5 (281-320)||(6516528-6516568)
chr5 (281-320)||(11875929-11875969)
chr5 (281-320)||(12444448-12444488)
chr5 (281-320)||(26402751-26402791)
chr5 (284-320)||(29654160-29654196)
chr5 (281-320)||(32400692-32400732)
chr5 (281-320)||(33686706-33686746)
chr5 (281-320)||(38901251-38901291)
chr5 (281-320)||(41044711-41044751)
chr5 (281-319)||(6516583-6516622)
chr5 (281-319)||(13408141-13408180)
chr5 (281-319)||(26402806-26402845)
chr5 (286-320)||(5160911-5160945)
chr5 (286-320)||(11875881-11875915)
chr5 (281-318)||(13408194-13408232)
chr5 (281-318)||(17229368-17229406)
chr5 (279-320)||(29096126-29096168)
chr5 (279-320)||(37978411-37978453)
chr5 (286-320)||(41460417-41460451)
chr5 (286-319)||(292216-292249)
chr5 (279-319)||(32128764-32128805)
chr5 (286-319)||(32400747-32400780)
chr5 (1-138)||(34425673-34425809)
chr5 (281-320)||(103894-103934)
chr5 (281-320)||(1007782-1007822)
chr5 (281-320)||(2172689-2172729)
chr5 (281-320)||(4000713-4000753)
chr5 (281-320)||(7411285-7411325)
chr5 (281-320)||(8525968-8526008)
chr5 (292-320)||(10596393-10596421)
chr5 (281-320)||(11092575-11092615)
chr5 (281-320)||(14322880-14322920)
chr5 (281-320)||(14692741-14692781)
chr5 (281-320)||(16425073-16425113)
chr5 (292-320)||(20961532-20961560)
chr5 (281-320)||(21021654-21021694)
chr5 (281-320)||(24565510-24565550)
chr5 (281-320)||(24606546-24606586)
chr5 (281-320)||(26522095-26522135)
chr5 (281-320)||(28442429-28442469)
chr5 (281-320)||(30896448-30896488)
chr5 (281-320)||(31109986-31110026)
chr5 (281-320)||(31124720-31124760)
chr5 (281-320)||(31703680-31703720)
chr5 (281-320)||(32128709-32128749)
chr5 (281-320)||(32618854-32618894)
chr5 (284-320)||(36976927-36976963)
chr5 (286-318)||(37036195-37036227)
chr5 (279-318)||(38298897-38298937)
chr5 (281-320)||(39814572-39814612)
chr5 (281-320)||(41960237-41960277)
chr5 (281-320)||(42661584-42661624)
chr5 (281-320)||(43514808-43514848)
[»] chr2 (57 HSPs)
chr2 (1-193)||(11952803-11953003)
chr2 (1-116)||(16227565-16227683)
chr2 (1-119)||(21665897-21666015)
chr2 (1-193)||(29694093-29694289)
chr2 (2-127)||(38400577-38400702)
chr2 (5-120)||(37622522-37622642)
chr2 (1-83)||(24035742-24035825)
chr2 (1-88)||(37182485-37182575)
chr2 (1-57)||(13800741-13800797)
chr2 (13-100)||(10252235-10252324)
chr2 (16-86)||(11912957-11913028)
chr2 (281-320)||(696447-696487)
chr2 (281-320)||(12611928-12611968)
chr2 (281-320)||(18381468-18381508)
chr2 (281-320)||(27251814-27251854)
chr2 (281-319)||(1378999-1379038)
chr2 (281-320)||(26062341-26062380)
chr2 (281-320)||(26068080-26068119)
chr2 (281-320)||(40141349-40141388)
chr2 (286-320)||(6649575-6649609)
chr2 (286-320)||(8811311-8811345)
chr2 (279-320)||(21108743-21108785)
chr2 (279-320)||(27281998-27282040)
chr2 (286-320)||(29387162-29387196)
chr2 (281-318)||(37342584-37342622)
chr2 (286-320)||(39751457-39751491)
chr2 (286-320)||(40073531-40073565)
chr2 (286-320)||(40141302-40141336)
chr2 (284-317)||(32347924-32347957)
chr2 (287-320)||(34129840-34129873)
chr2 (286-319)||(39541702-39541735)
chr2 (281-320)||(1378944-1378984)
chr2 (281-320)||(5475557-5475597)
chr2 (281-320)||(5612624-5612664)
chr2 (279-318)||(6706675-6706715)
chr2 (281-320)||(8811257-8811297)
chr2 (281-320)||(9536579-9536619)
chr2 (281-320)||(11752892-11752932)
chr2 (281-320)||(14786739-14786779)
chr2 (292-320)||(16675633-16675661)
chr2 (281-316)||(17158251-17158287)
chr2 (281-320)||(18115509-18115549)
chr2 (281-320)||(20579642-20579682)
chr2 (281-320)||(22083291-22083331)
chr2 (281-316)||(26336481-26336517)
chr2 (281-320)||(28720518-28720558)
chr2 (281-320)||(32400812-32400852)
chr2 (281-320)||(32901662-32901702)
chr2 (281-320)||(33537136-33537176)
chr2 (281-320)||(34423082-34423122)
chr2 (281-320)||(36741648-36741688)
chr2 (281-320)||(36741702-36741742)
chr2 (281-320)||(38203750-38203790)
chr2 (281-320)||(39007815-39007855)
chr2 (281-320)||(41438061-41438101)
chr2 (281-320)||(44537627-44537667)
chr2 (281-320)||(45134008-45134048)
[»] chr7 (54 HSPs)
chr7 (1-123)||(27237619-27237742)
chr7 (1-193)||(7398165-7398357)
chr7 (1-86)||(23020678-23020764)
chr7 (1-120)||(26917878-26918001)
chr7 (1-88)||(23858892-23858979)
chr7 (1-123)||(20152986-20153109)
chr7 (1-206)||(12419693-12419894)
chr7 (279-317)||(3730770-3730808)
chr7 (282-320)||(18803577-18803615)
chr7 (281-320)||(1730573-1730613)
chr7 (281-320)||(2394180-2394220)
chr7 (281-320)||(9328167-9328207)
chr7 (281-320)||(21973768-21973808)
chr7 (281-320)||(48154239-48154279)
chr7 (281-320)||(5851577-5851616)
chr7 (281-319)||(21973714-21973753)
chr7 (281-320)||(32611540-32611579)
chr7 (281-320)||(42913719-42913758)
chr7 (281-319)||(48154294-48154333)
chr7 (286-320)||(5072481-5072515)
chr7 (105-162)||(9014930-9014988)
chr7 (286-320)||(21804295-21804329)
chr7 (279-320)||(37378932-37378974)
chr7 (279-320)||(41013797-41013839)
chr7 (279-320)||(43333014-43333056)
chr7 (279-320)||(43725762-43725804)
chr7 (286-319)||(21707012-21707045)
chr7 (286-319)||(28555025-28555058)
chr7 (279-320)||(36678277-36678318)
chr7 (286-319)||(41320851-41320884)
chr7 (279-319)||(44481637-44481678)
chr7 (281-320)||(2963242-2963282)
chr7 (281-320)||(3671116-3671156)
chr7 (281-320)||(11290322-11290362)
chr7 (281-320)||(13471782-13471822)
chr7 (281-320)||(15076319-15076359)
chr7 (292-320)||(18683237-18683265)
chr7 (281-320)||(19228484-19228524)
chr7 (281-320)||(19919500-19919540)
chr7 (281-320)||(21832282-21832322)
chr7 (281-320)||(25784758-25784798)
chr7 (281-320)||(26157689-26157729)
chr7 (281-320)||(29128081-29128121)
chr7 (281-320)||(32436719-32436759)
chr7 (281-320)||(34327105-34327145)
chr7 (281-320)||(35471827-35471867)
chr7 (281-320)||(38778068-38778108)
chr7 (292-320)||(40056269-40056297)
chr7 (281-320)||(43301693-43301733)
chr7 (281-320)||(43725818-43725858)
chr7 (281-320)||(45864136-45864176)
chr7 (281-320)||(45864190-45864230)
chr7 (281-320)||(45986886-45986926)
chr7 (281-320)||(47272855-47272895)
[»] chr3 (75 HSPs)
chr3 (1-163)||(26279283-26279449)
chr3 (1-65)||(42453257-42453321)
chr3 (1-65)||(52374509-52374573)
chr3 (281-320)||(15007322-15007362)
chr3 (281-320)||(23550904-23550944)
chr3 (281-320)||(31401444-31401484)
chr3 (281-320)||(33463525-33463565)
chr3 (281-320)||(37671590-37671630)
chr3 (281-320)||(39176872-39176912)
chr3 (281-320)||(40007037-40007077)
chr3 (281-317)||(46486467-46486503)
chr3 (281-320)||(49083570-49083610)
chr3 (281-320)||(53582720-53582760)
chr3 (284-319)||(26370050-26370085)
chr3 (278-320)||(45779059-45779102)
chr3 (279-319)||(52169371-52169413)
chr3 (279-320)||(4229575-4229617)
chr3 (286-320)||(8150898-8150932)
chr3 (286-320)||(25588020-25588054)
chr3 (281-318)||(30430422-30430460)
chr3 (281-319)||(37169848-37169886)
chr3 (286-320)||(41992984-41993018)
chr3 (279-320)||(42737644-42737686)
chr3 (279-320)||(43545158-43545200)
chr3 (279-320)||(48180565-48180607)
chr3 (279-320)||(49221012-49221054)
chr3 (279-320)||(55204691-55204733)
chr3 (286-319)||(3918365-3918398)
chr3 (281-318)||(18386350-18386387)
chr3 (279-320)||(26256971-26257012)
chr3 (286-319)||(33254671-33254704)
chr3 (286-319)||(33463477-33463510)
chr3 (279-319)||(41992928-41992969)
chr3 (286-319)||(52252805-52252838)
chr3 (286-319)||(55379006-55379039)
chr3 (281-320)||(2928357-2928397)
chr3 (281-320)||(7865185-7865225)
chr3 (281-320)||(8150946-8150986)
chr3 (281-320)||(9110816-9110856)
chr3 (281-320)||(9253982-9254022)
chr3 (281-320)||(10522947-10522987)
chr3 (281-320)||(19227878-19227918)
chr3 (281-320)||(21863946-21863986)
chr3 (292-320)||(22721569-22721597)
chr3 (281-320)||(25396471-25396511)
chr3 (281-320)||(26859568-26859608)
chr3 (281-320)||(30640663-30640703)
chr3 (281-320)||(31311144-31311184)
chr3 (281-320)||(33629752-33629792)
chr3 (292-320)||(35107694-35107722)
chr3 (286-318)||(35107740-35107772)
chr3 (281-320)||(37568596-37568636)
chr3 (281-320)||(38472409-38472449)
chr3 (279-318)||(39329990-39330030)
chr3 (281-320)||(39996398-39996438)
chr3 (281-320)||(41187490-41187530)
chr3 (281-320)||(42629028-42629068)
chr3 (281-320)||(43081343-43081383)
chr3 (281-320)||(43140710-43140750)
chr3 (281-320)||(43974214-43974254)
chr3 (281-320)||(45474664-45474704)
chr3 (281-320)||(46291259-46291299)
chr3 (281-320)||(46710486-46710526)
chr3 (281-320)||(47360706-47360746)
chr3 (281-320)||(47450959-47450999)
chr3 (292-320)||(47865496-47865524)
chr3 (281-320)||(50660768-50660808)
chr3 (286-318)||(51842331-51842363)
chr3 (281-320)||(52169316-52169356)
chr3 (281-320)||(52459919-52459959)
chr3 (281-320)||(53594536-53594576)
chr3 (281-320)||(54184568-54184608)
chr3 (281-320)||(54279742-54279782)
chr3 (281-320)||(54617559-54617599)
chr3 (281-320)||(55378951-55378991)
[»] chr1 (73 HSPs)
chr1 (2-193)||(39134920-39135119)
chr1 (1-83)||(10926140-10926223)
chr1 (1-82)||(26803784-26803866)
chr1 (279-320)||(2119324-2119366)
chr1 (279-320)||(4618348-4618390)
chr1 (279-320)||(46939460-46939502)
chr1 (279-319)||(4618405-4618446)
chr1 (279-319)||(52510664-52510705)
chr1 (281-320)||(91545-91585)
chr1 (281-320)||(4761365-4761405)
chr1 (281-320)||(7236847-7236887)
chr1 (281-320)||(10555851-10555891)
chr1 (281-320)||(12300592-12300632)
chr1 (281-320)||(21701357-21701397)
chr1 (281-320)||(46947225-46947265)
chr1 (281-320)||(52510609-52510649)
chr1 (281-319)||(7236902-7236941)
chr1 (281-319)||(8760023-8760062)
chr1 (281-319)||(12300538-12300577)
chr1 (281-319)||(41885257-41885296)
chr1 (281-319)||(46947693-46947732)
chr1 (279-320)||(1377379-1377421)
chr1 (286-320)||(1607738-1607772)
chr1 (286-320)||(15600494-15600528)
chr1 (279-320)||(17992189-17992231)
chr1 (279-320)||(18520799-18520841)
chr1 (286-320)||(34941386-34941420)
chr1 (286-320)||(35796131-35796165)
chr1 (279-320)||(52556340-52556382)
chr1 (286-319)||(14083217-14083250)
chr1 (279-319)||(14292463-14292504)
chr1 (286-319)||(17632930-17632963)
chr1 (284-320)||(20754524-20754561)
chr1 (286-319)||(20754576-20754609)
chr1 (286-319)||(26821050-26821083)
chr1 (286-319)||(32589886-32589919)
chr1 (280-320)||(52826749-52826790)
chr1 (281-320)||(538699-538739)
chr1 (281-316)||(3592382-3592418)
chr1 (281-320)||(3751555-3751595)
chr1 (281-320)||(5186627-5186667)
chr1 (292-320)||(5731157-5731185)
chr1 (281-320)||(6401865-6401905)
chr1 (281-320)||(6785729-6785769)
chr1 (281-320)||(6788985-6789025)
chr1 (279-318)||(8819207-8819247)
chr1 (281-320)||(9003895-9003935)
chr1 (286-318)||(9479075-9479107)
chr1 (281-320)||(9780393-9780433)
chr1 (281-320)||(14292408-14292448)
chr1 (281-320)||(14420757-14420797)
chr1 (281-320)||(16987975-16988015)
chr1 (281-320)||(19910818-19910858)
chr1 (281-320)||(20748709-20748749)
chr1 (281-320)||(21276408-21276448)
chr1 (281-320)||(26820995-26821035)
chr1 (281-320)||(27494886-27494926)
chr1 (292-320)||(30222209-30222237)
chr1 (281-320)||(30364051-30364091)
chr1 (292-320)||(30800761-30800789)
chr1 (281-320)||(33056235-33056275)
chr1 (292-320)||(33417755-33417783)
chr1 (292-320)||(33826172-33826200)
chr1 (292-320)||(33879246-33879274)
chr1 (281-320)||(36783172-36783212)
chr1 (281-320)||(40434554-40434594)
chr1 (281-320)||(43226885-43226925)
chr1 (281-320)||(44778645-44778685)
chr1 (281-320)||(45143766-45143806)
chr1 (281-320)||(46634753-46634793)
chr1 (281-320)||(47844131-47844171)
chr1 (281-320)||(48411301-48411341)
chr1 (281-320)||(49580155-49580195)
[»] chr4 (75 HSPs)
chr4 (1-127)||(52468070-52468197)
chr4 (1-120)||(40217017-40217141)
chr4 (1-118)||(36118653-36118771)
chr4 (1-112)||(37746917-37747028)
chr4 (1-75)||(2135514-2135588)
chr4 (1-88)||(39329600-39329688)
chr4 (1-120)||(27111825-27111942)
chr4 (1-120)||(36363066-36363185)
chr4 (14-83)||(24396765-24396835)
chr4 (1-120)||(15734885-15735007)
chr4 (279-320)||(4894235-4894277)
chr4 (13-58)||(4168081-4168126)
chr4 (279-320)||(33270225-33270266)
chr4 (279-320)||(34100761-34100802)
chr4 (281-320)||(5092794-5092834)
chr4 (281-320)||(24284966-24285006)
chr4 (281-320)||(29146024-29146064)
chr4 (281-320)||(34402984-34403024)
chr4 (281-320)||(38103822-38103862)
chr4 (281-320)||(49013438-49013478)
chr4 (278-320)||(13482958-13483001)
chr4 (282-320)||(49333675-49333714)
chr4 (7-86)||(50677212-50677295)
chr4 (281-320)||(51627013-51627052)
chr4 (285-320)||(56302552-56302587)
chr4 (279-320)||(4053609-4053651)
chr4 (279-320)||(7744557-7744599)
chr4 (286-320)||(8168399-8168433)
chr4 (286-320)||(13030610-13030644)
chr4 (286-320)||(25593930-25593964)
chr4 (286-320)||(29963286-29963320)
chr4 (286-320)||(39407673-39407707)
chr4 (282-319)||(39652459-39652497)
chr4 (279-320)||(39910798-39910840)
chr4 (279-320)||(41827527-41827569)
chr4 (286-320)||(43440177-43440211)
chr4 (279-320)||(48471735-48471777)
chr4 (283-320)||(48736319-48736357)
chr4 (279-320)||(52439095-52439137)
chr4 (279-320)||(2472789-2472830)
chr4 (284-320)||(11987419-11987456)
chr4 (286-319)||(34374211-34374244)
chr4 (286-319)||(50618808-50618841)
chr4 (281-320)||(1825804-1825844)
chr4 (281-320)||(1829146-1829186)
chr4 (281-320)||(1924265-1924305)
chr4 (281-320)||(2904806-2904846)
chr4 (281-320)||(3613997-3614037)
chr4 (281-320)||(6213118-6213158)
chr4 (281-320)||(7111402-7111442)
chr4 (281-320)||(8080282-8080322)
chr4 (281-320)||(9370163-9370203)
chr4 (286-318)||(12591365-12591397)
chr4 (287-319)||(16078434-16078466)
chr4 (281-320)||(16078481-16078521)
chr4 (281-320)||(22008215-22008255)
chr4 (281-320)||(22224244-22224284)
chr4 (281-320)||(23623965-23624005)
chr4 (286-318)||(25810766-25810798)
chr4 (281-320)||(26618627-26618667)
chr4 (281-320)||(26917993-26918033)
chr4 (281-320)||(27285266-27285306)
chr4 (281-320)||(28567817-28567857)
chr4 (281-320)||(30031693-30031733)
chr4 (279-319)||(31079130-31079170)
chr4 (281-320)||(32801005-32801045)
chr4 (281-320)||(35120173-35120213)
chr4 (281-320)||(39652404-39652444)
chr4 (281-320)||(47805169-47805209)
chr4 (281-320)||(47812302-47812342)
chr4 (286-318)||(49458928-49458960)
chr4 (286-318)||(50683352-50683384)
chr4 (281-320)||(52960257-52960297)
chr4 (281-320)||(55811321-55811361)
chr4 (281-320)||(56365334-56365374)
[»] chr8 (62 HSPs)
chr8 (1-120)||(15167610-15167731)
chr8 (1-170)||(34048904-34049076)
chr8 (1-118)||(15078547-15078666)
chr8 (1-82)||(8646024-8646106)
chr8 (1-52)||(38009333-38009384)
chr8 (279-320)||(14148601-14148643)
chr8 (281-320)||(1770028-1770068)
chr8 (281-320)||(10605673-10605713)
chr8 (281-320)||(27141180-27141220)
chr8 (133-193)||(38009479-38009539)
chr8 (281-320)||(38656378-38656418)
chr8 (1-56)||(41677370-41677426)
chr8 (284-319)||(1047455-1047490)
chr8 (281-319)||(1770083-1770122)
chr8 (278-320)||(13013146-13013189)
chr8 (281-319)||(13013204-13013243)
chr8 (281-319)||(40668690-40668729)
chr8 (286-320)||(2433718-2433752)
chr8 (286-320)||(4052736-4052770)
chr8 (279-320)||(7761984-7762026)
chr8 (286-320)||(14148691-14148725)
chr8 (286-320)||(18595978-18596012)
chr8 (279-320)||(33316469-33316511)
chr8 (279-320)||(42148704-42148746)
chr8 (286-319)||(26615585-26615618)
chr8 (286-319)||(27141131-27141164)
chr8 (286-319)||(30465841-30465874)
chr8 (281-317)||(34010544-34010581)
chr8 (281-320)||(125250-125290)
chr8 (281-320)||(616057-616097)
chr8 (281-320)||(622450-622490)
chr8 (281-320)||(4586441-4586481)
chr8 (281-320)||(5059871-5059911)
chr8 (281-320)||(8525490-8525530)
chr8 (281-320)||(8878594-8878634)
chr8 (281-320)||(9407155-9407195)
chr8 (281-320)||(9639529-9639569)
chr8 (284-320)||(10983467-10983503)
chr8 (281-320)||(11096889-11096929)
chr8 (292-320)||(13574884-13574912)
chr8 (281-320)||(14395516-14395556)
chr8 (281-320)||(18252676-18252716)
chr8 (281-320)||(18558263-18558303)
chr8 (292-320)||(19164615-19164643)
chr8 (281-320)||(26063572-26063612)
chr8 (292-320)||(26151327-26151355)
chr8 (281-320)||(26544071-26544111)
chr8 (281-316)||(27751447-27751483)
chr8 (281-320)||(28192627-28192667)
chr8 (281-320)||(30025684-30025724)
chr8 (281-320)||(34114953-34114993)
chr8 (281-320)||(35575137-35575177)
chr8 (281-320)||(35821948-35821988)
chr8 (281-320)||(37411819-37411859)
chr8 (46-95)||(38009387-38009438)
chr8 (281-320)||(40668635-40668675)
chr8 (281-320)||(42309652-42309692)
chr8 (281-320)||(42641126-42641166)
chr8 (281-320)||(42668224-42668264)
chr8 (292-320)||(42668278-42668306)
chr8 (281-320)||(44060705-44060745)
chr8 (281-320)||(44724446-44724486)
[»] scaffold1320 (1 HSPs)
scaffold1320 (1-118)||(1143-1262)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-84)||(173707-173790)
[»] chr6 (27 HSPs)
chr6 (1-95)||(20611604-20611699)
chr6 (1-120)||(2477780-2477898)
chr6 (279-320)||(30756760-30756802)
chr6 (279-319)||(22734268-22734309)
chr6 (281-320)||(7269044-7269084)
chr6 (281-320)||(7575883-7575923)
chr6 (281-320)||(22734324-22734364)
chr6 (281-320)||(26682934-26682974)
chr6 (281-320)||(33858496-33858536)
chr6 (281-319)||(7575939-7575978)
chr6 (281-319)||(17545135-17545174)
chr6 (286-320)||(32820199-32820233)
chr6 (286-319)||(34327734-34327767)
chr6 (281-320)||(1336786-1336826)
chr6 (281-320)||(1962618-1962658)
chr6 (281-320)||(8440304-8440344)
chr6 (281-320)||(8677898-8677938)
chr6 (281-320)||(9550494-9550534)
chr6 (281-320)||(12149049-12149089)
chr6 (292-320)||(13648779-13648807)
chr6 (281-320)||(19680656-19680696)
chr6 (281-320)||(32245132-32245172)
chr6 (281-320)||(32400709-32400749)
chr6 (281-320)||(32820146-32820186)
chr6 (281-320)||(34188041-34188081)
chr6 (281-320)||(34674360-34674400)
chr6 (281-320)||(34921124-34921164)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-81)||(231056-231137)
[»] scaffold0683 (2 HSPs)
scaffold0683 (281-320)||(3418-3458)
scaffold0683 (286-319)||(3473-3506)
[»] scaffold0017 (1 HSPs)
scaffold0017 (281-320)||(34586-34626)
[»] scaffold0196 (2 HSPs)
scaffold0196 (279-320)||(18235-18277)
scaffold0196 (281-320)||(975-1015)
[»] scaffold0172 (1 HSPs)
scaffold0172 (286-320)||(11966-12000)
[»] scaffold0121 (1 HSPs)
scaffold0121 (282-316)||(2798-2832)
[»] scaffold0137 (1 HSPs)
scaffold0137 (286-319)||(21674-21707)
[»] scaffold0936 (1 HSPs)
scaffold0936 (281-320)||(854-894)
[»] scaffold0508 (1 HSPs)
scaffold0508 (281-320)||(6474-6514)
[»] scaffold0024 (1 HSPs)
scaffold0024 (281-320)||(37662-37702)


Alignment Details
Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 2024834 - 2024996
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgt--tttttag 97  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||  ||||| |||||||||||||||||| |||| |  |||||||    
T  2024834 gaaatcaaatcggggaagaagaaaaggaaagtcagatggagtgatggtgatggaacgcgcggtatcagagagaaagagaataaggaatttttgtttttag 2024933  T
Q  98 tggtctagtacttagtagtactattggact-ttatattttttaggttcataccttggggaggc 159  Q
    |||  |||||||||||||||||| ||| || | || ||||||||   ||||||||||||||||    
T  2024934 tggggtagtacttagtagtactactgggctataattttttttagacccataccttggggaggc 2024996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 15639360 - 15639162
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    |||||||||||||||||||||||| ||||| || ||  |||||||||||||||||||  |||||| |||||||||||||||||| |||  ||||||||||    
T  15639360 gaaatcaaatcggggaagaagaaagggaaaattcgacagagtgatggtgatggaacgtgtggtatcagagagaaagagaataagtaat--ttttttagtg 15639263  T
Q  100 gtctagtacttagtagtactattggacttta---tattttttaggttcataccttggggaggcccaggttcattgaactcttagcacatcccaaggtacg 196  Q
    |  |||||||||||||||||| |||||| ||   | |||||||||  ||||||||||||||  |||| | |||||| ||| | ||||| | |||||||||    
T  15639262 gggtagtacttagtagtactactggactataattttttttttaggcccataccttggggagctccagttccattgagctccttgcacacctcaaggtacg 15639163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 2411995 - 2411870
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| | |||||| | |||||||||||||||  |  | ||||||||||    
T  2411995 gaaatcaaattggggaagaagaaaaggaaagtctgatggagtgatggtgatggaacacgtggtatcaaagagaaagagaataatga--ttttttttagtg 2411898  T
Q  100 gtctagtacttagtagtactattggact 127  Q
    |  ||||||||||||| |||||||||||    
T  2411897 gggtagtacttagtagcactattggact 2411870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40794519 - 40794604
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaa 85  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||||| | ||||||||||||||||||    
T  40794519 gaaatcaaatccgggaagaagaaaaggaaagtttgatggaatgatggtaatggaacgcgtggtatcaaagagaaagagaataagaa 40794604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 26719090 - 26719200
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    ||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||| |||||| |||||||||||||||| | |||| ||||||| ||    
T  26719090 gaaatcaaatcaggaaagaagaaaaggaaagttcgatgcagtgatggtgatggaacgcgtggtatcagagagaaagagaatatg-aatttttttttaatg 26719188  T
Q  100 gtctagtactta 111  Q
     | |||||||||    
T  26719189 atgtagtactta 26719200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 26988834 - 26988944
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    ||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||| |||||| |||||||||||||||| | |||| ||||||| ||    
T  26988834 gaaatcaaatcaggaaagaagaaaaggaaagttcgatgcagtgatggtgatggaacgcgtggtatcagagagaaagagaatatg-aatttttttttaatg 26988932  T
Q  100 gtctagtactta 111  Q
     | |||||||||    
T  26988933 atgtagtactta 26988944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34307328 - 34307414
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaa 86  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||   |||||| |||||||||||||||||||||    
T  34307328 gaaatcaaatcggagaagaagaaaaggaaagtccgatggagtgatggtgatggaacatgtggtatcagagagaaagagaataagaaa 34307414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24395644 - 24395590
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaa 55  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24395644 gaaatcaaatcggggaagaagaaaaggaaagtctgatggagtgatggtgatggaa 24395590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 10543588 - 10543471
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    |||||||||||||| ||||| |||||||||||  || ||||||||| ||||||||||| ||||||  |||||||||||||||||   || |||||||||     
T  10543588 gaaatcaaatcgggaaagaataaaaggaaagtccgacggagtgatgatgatggaacgcatggtatccgagagaaagagaataag---tttttttttagta 10543492  T
Q  100 gtctagtacttagtagtacta 120  Q
    |  ||||| ||||||||||||    
T  10543491 gggtagtatttagtagtacta 10543471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 11242512 - 11242708
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtatagagagaaagagaataagaaa---ttgttttt-ta 96  Q
    |||||| |||||||||||||||||||||||||    |||||||||| ||||||||||| |||||| |||||| | |||||||  ||   |||||||| ||    
T  11242512 gaaatcgaatcggggaagaagaaaaggaaagtccattggagtgatgatgatggaacgcgtggtat-gagagagaaagaataaagaatttttgtttttata 11242610  T
Q  97 gtggtctagtacttagtagtactattggacttta-tattttttaggttcataccttggggaggcccaggttcattgaactcttagcacatcccaaggt 193  Q
    ||||  |||||||||| ||||||| |||  | || | |||||||||  |||||||||| |||||| || | |||||||||| | ||||| | ||||||    
T  11242611 gtggggtagtacttagcagtactactgggttatatttttttttaggcccataccttggagaggccaagttccattgaactccttgcacacctcaaggt 11242708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14318578 - 14318624
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatgg 47  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  14318578 gaaatcaaatcggagaagaagaaaacgaaagtctgatggagtgatgg 14318624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 36177917 - 36177876
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  36177917 aatagaattttttaacaaaacatgaattaaatatgaattttt 36177876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 292304 - 292264
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  292304 tagaattttttaccaaaacatgaattaaatatgaattttta 292264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 606208 - 606140
Alignment:
Q  34 tgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgtt-ttttagtgg 100  Q
    |||||||||||||||||||||| |  |||||| |||| |||||||||||||||||| || |||||||||    
T  606208 tgatggagtgatggtgatggaatgtgtggtatcagagtgaaagagaataagaaatttttcttttagtgg 606140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 3971729 - 3971769
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  3971729 tagaattttttaccaaaacatgaattaaatatgaattttta 3971769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 6516528 - 6516568
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  6516528 tagaattttttaccaaaacatgaattaaatatgaattttta 6516568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 11875969 - 11875929
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  11875969 tagaattttttaacaaaacatgaattaaatatgaattttta 11875929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 12444448 - 12444488
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  12444448 tagaattttttaccaaaacatgaattaaatatgaattttta 12444488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 26402751 - 26402791
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  26402751 tagaattttttaccaaaacatgaattaaatatgaattttta 26402791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 29654160 - 29654196
Alignment:
Q  284 aattttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||||| |||||||||||||||||||||||||||||    
T  29654160 aatttttaacaaaacatgaattaaatatgaattttta 29654196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 32400692 - 32400732
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  32400692 tagaattttttaccaaaacatgaattaaatatgaattttta 32400732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 33686746 - 33686706
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  33686746 tagaattttttaccaaaacatgaattaaatatgaattttta 33686706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 38901291 - 38901251
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  38901291 tagaattttttaccaaaacatgaattaaatatgaattttta 38901251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 41044711 - 41044751
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  41044711 tagaattttttaccaaaacatgaattaaatatgaattttta 41044751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 6516622 - 6516583
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  6516622 tagaattttttaacaaaacatgaattaaatatgaattttt 6516583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 13408141 - 13408180
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  13408141 tagaattttttaacaaaacatgaattaaatatgaattttt 13408180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 26402845 - 26402806
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  26402845 tagaattttttaacaaaacatgaattaaatatgaattttt 26402806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 5160945 - 5160911
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  5160945 tttttaacaaaacatgaattaaatatgaattttta 5160911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 11875881 - 11875915
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  11875881 tttttaacaaaacatgaattaaatatgaattttta 11875915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 318
Target Start/End: Complemental strand, 13408232 - 13408194
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaatttt 318  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  13408232 tagaattttttaccaaaacatgaattaaatatgaatttt 13408194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 17229368 - 17229406
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaatttt 318  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  17229368 tagaattttttaacaaaacatgaattaaatatgaatttt 17229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 29096126 - 29096168
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  29096126 aatagaattttttaacaaaacatgaatcaaatatgaattttta 29096168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 37978411 - 37978453
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  37978411 aatagaattttttaacaaaacatgaatttaatatgaattttta 37978453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 41460417 - 41460451
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  41460417 tttttaacaaaacatgaattaaatatgaattttta 41460451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 292216 - 292249
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||    
T  292216 ttttttacaaaatatgaattaaatatgaattttt 292249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 32128805 - 32128764
Alignment:
Q  279 aatagaattttttac-aaaacatgaattaaatatgaattttt 319  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  32128805 aatagaattttttaataaaacatgaattaaatatgaattttt 32128764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 32400780 - 32400747
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  32400780 tttttaacaaaacatgaattaaatatgaattttt 32400747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 34425809 - 34425673
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgt-tttttagt 98  Q
    ||||||||||||||| ||||   ||| ||| | ||||||||| |||| |||||||||  |||||| | |||||||||| || || |||| | ||||||||    
T  34425809 gaaatcaaatcggggcagaa---aagaaaattctgatggagttatggcgatggaacgtgtggtatcaaagagaaagaggatgaggaattttgtttttagt 34425713  T
Q  99 ggtctagtacttagtagtactattggactttatatttttt 138  Q
    ||  |||||||||||| ||||| ||| || || |||||||    
T  34425712 ggggtagtacttagtaatactactgggctataaatttttt 34425673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 103934 - 103894
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  103934 tagaattttttaacaaaacatgaatttaatatgaattttta 103894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 1007782 - 1007822
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  1007782 tagaattttttaacaaaacatgaatttaatatgaattttta 1007822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 2172689 - 2172729
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  2172689 tagaattttttaacaaaacatgaatttaatatgaattttta 2172729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 4000713 - 4000753
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  4000713 tagaattttttaacaaaacatgaatttaatatgaattttta 4000753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 7411325 - 7411285
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  7411325 tagaattttttaacaaaacatgaatttaatatgaattttta 7411285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 8526008 - 8525968
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  8526008 tagaattttttaacaaaacatgaatttaatatgaattttta 8525968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 10596421 - 10596393
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  10596421 acaaaacatgaattaaatatgaattttta 10596393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 11092575 - 11092615
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  11092575 tagaattttttaacaaaacatgaatttaatatgaattttta 11092615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 14322920 - 14322880
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  14322920 tagaattttttaacaaaacatgaatttaatatgaattttta 14322880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 14692781 - 14692741
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  14692781 tagaattttttaacaaaacatgaatttaatatgaattttta 14692741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 16425073 - 16425113
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  16425073 tagaattttttaacaaaacatgaatttaatatgaattttta 16425113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 20961560 - 20961532
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  20961560 acaaaacatgaattaaatatgaattttta 20961532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 21021654 - 21021694
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  21021654 tagaattttttaacaaaacatgaatttaatatgaattttta 21021694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 24565510 - 24565550
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  24565510 tagaattttttaacaaaacatgaatttaatatgaattttta 24565550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 24606546 - 24606586
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  24606546 tagaattttttaacaaaacatgaatttaatatgaattttta 24606586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 26522135 - 26522095
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  26522135 tagaattttttaacaaaacatgaatttaatatgaattttta 26522095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 28442429 - 28442469
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  28442429 tagaattttttaagaaaacatgaattaaatatgaattttta 28442469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 30896488 - 30896448
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  30896488 tagaattttttaacaaaacatgaatttaatatgaattttta 30896448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 31110026 - 31109986
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  31110026 tagaattttttaacaaaacatgaatttaatatgaattttta 31109986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 31124720 - 31124760
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  31124720 tagaattttttaacaaaacatgaatttaatatgaattttta 31124760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 31703680 - 31703720
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  31703680 tagaattttttaacaaaacatgaatttaatatgaattttta 31703720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 32128709 - 32128749
Alignment:
Q  281 tagaattttttacaa-aacatgaattaaatatgaattttta 320  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  32128709 tagaattttttaccataacatgaattaaatatgaattttta 32128749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 32618894 - 32618854
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  32618894 tagaatattttaccaaaacatgaattaaatatgaattttta 32618854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 36976963 - 36976927
Alignment:
Q  284 aattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||||  ||||||||||||||||||||||||||||    
T  36976963 aatttttaccaaaacatgaattaaatatgaattttta 36976927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 318
Target Start/End: Complemental strand, 37036227 - 37036195
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaatttt 318  Q
    ||||| |||||||||||||||||||||||||||    
T  37036227 tttttaacaaaacatgaattaaatatgaatttt 37036195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 318
Target Start/End: Original strand, 38298897 - 38298937
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaatttt 318  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  38298897 aatagaattttttaacaaagcatgaattaaatatgaatttt 38298937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 39814572 - 39814612
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  39814572 tagaattttttaacaaaacataaattaaatatgaattttta 39814612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 41960277 - 41960237
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  41960277 tagaattttttaacaaaacatgaatttaatatgaattttta 41960237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 42661624 - 42661584
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  42661624 tagaattttttaacaaaacatgaatttaatatgaattttta 42661584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 43514848 - 43514808
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  43514848 tagaattttttaacaaaacatgaatttaatatgaattttta 43514808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 11952803 - 11953003
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggta-tagagagaaagagaataagaaattgt--tttttag 97  Q
    |||||||||||||||||||||||||||||||   | |||||||||||||||||||||| |||||  |||||||||||||||||  |||| |  |||||||    
T  11952803 gaaatcaaatcggggaagaagaaaaggaaagcccggtggagtgatggtgatggaacgcgtggtaccagagagaaagagaataaagaatttttgtttttag 11952902  T
Q  98 tggtctagtacttagtagtactattggact-----ttatattttttaggttcataccttggggaggcccaggttcattgaactcttagcacatcccaagg 192  Q
    |||  ||||||||||||||||||  || ||     || ||||||| ||| ||||||||||||||||||||| | |||||| ||| | ||||| |||||||    
T  11952903 tggagtagtacttagtagtactacagggctataaattttatttttgaggctcataccttggggaggcccagttccattgagctccttgcacaccccaagg 11953002  T
Q  193 t 193  Q
    |    
T  11953003 t 11953003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16227565 - 16227683
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgt--tttttag 97  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||| |  |||||||    
T  16227565 gaaatcaaatcggggaagaagaaaaggaaaggccgatggagtgatggtgatgaaacgcgtggtatcagagagaaagagaataagaaatttttgtttttag 16227664  T
Q  98 tggtctagtacttagtagt 116  Q
    |||  ||||||||||||||    
T  16227665 tgggatagtacttagtagt 16227683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 21665897 - 21666015
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | |||||||||||||||| |||| ||||||||||    
T  21665897 gaaatcaaattggggaagaagaaaaggaaagtctgatggagtgatgatgatggaacgcgtggtatcaaagagaaagagaataaggaatt-ttttttagtg 21665995  T
Q  100 gtctagtacttagtagtact 119  Q
    |  |||| ||||||||||||    
T  21665996 gggtagtgcttagtagtact 21666015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 29694289 - 29694093
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataag--aaattgttttttag 97  Q
    |||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| |||||| ||| |||| |||||||||  || || || |||||    
T  29694289 gaaatcaaatcggggaagaagaaaaggaaaatttgataaagtgatggtgatggaacgcgtggtatcagatagaaggagaataaggaaatttattgtttag 29694190  T
Q  98 tggtctagtacttagtagtactattggact-ttatattttttaggttcataccttggggaggcccaggttcattgaactcttagcacatcccaaggt 193  Q
     ||  |||||||||||||||||| ||| || | || ||||||||   ||||||||  |||||||||| | |||||| ||||| ||||| ||||||||    
T  29694189 cggagtagtacttagtagtactagtgggctataattttttttagacccataccttaaggaggcccagctccattgagctctttgcacaccccaaggt 29694093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 38400702 - 38400577
Alignment:
Q  2 aaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtgg 100  Q
    ||||||||| |||||||||||||| ||||||||||||||||||  ||||||||||   |||||| ||| |||||||||||||| |||| || ||||||||    
T  38400702 aaatcaaattggggaagaagaaaacgaaagtttgatggagtgacagtgatggaacatgtggtatcagaaagaaagagaataaggaatt-ttgtttagtgg 38400604  T
Q  101 tctagtacttagtagtactattggact 127  Q
      |||||||||||||||||||||||||    
T  38400603 ggtagtacttagtagtactattggact 38400577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 37622522 - 37622642
Alignment:
Q  5 tcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaa--ttg--ttttttagtg 99  Q
    ||||| || ||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||||||| |||||||||  |||  ||||||||||    
T  37622522 tcaaaccgaggaagaagaaaaggaaagtctgatggagtgatgatgatggaacgcgtggtatgagagagaaagataataagaaaatttgttttttttagtg 37622621  T
Q  100 gtctagtacttagtagtacta 120  Q
    |  ||||||||||||||||||    
T  37622622 gggtagtacttagtagtacta 37622642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24035742 - 24035825
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataag 83  Q
    ||||||||||| ||||||||||||| |||| || ||||||||||||||||| |||||| ||| || ||||||||||| ||||||    
T  24035742 gaaatcaaatcagggaagaagaaaatgaaatttcgatggagtgatggtgatcgaacgcgtggcatcagagagaaagataataag 24035825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37182575 - 37182485
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaag--tttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaatt 88  Q
    ||||||||||||||||||||||| | ||||   ||||||||||| ||||||||| ||||  |||||| |||||||||||||||||||||||    
T  37182575 gaaatcaaatcggggaagaagaagaagaaaaaatttgatggagtaatggtgatgtaacgtgtggtatcagagagaaagagaataagaaatt 37182485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13800741 - 13800797
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacg 57  Q
    ||||||||||||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  13800741 gaaatcaaatcggagaagaagaaaatgaaagtccgatggagtgatggtgatggaacg 13800797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 10252324 - 10252235
Alignment:
Q  13 gggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggta-tagagagaaagagaat-aagaaattgttttttagtgg 100  Q
    |||||||||||||||||| | ||||||||||||||||||| ||| | ||||| |  ||||||||||||| ||||| || |||||||||||    
T  10252324 gggaagaagaaaaggaaaatctgatggagtgatggtgatgaaacacatggtattttagagaaagagaataaagaatttattttttagtgg 10252235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 11912957 - 11913028
Alignment:
Q  16 aagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaa 86  Q
    |||||||||||||||||   ||||||| ||| |||||||| || |||||| |||||||||||||||||||||    
T  11912957 aagaagaaaaggaaagtgcaatggagttatgatgatggaatgcgtggtatcagagagaaagagaataagaaa 11913028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 696487 - 696447
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  696487 tagaattttttaccaaaacatgaattaaatatgaattttta 696447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 12611968 - 12611928
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  12611968 tagaattttttaccaaaacatgaattaaatatgaattttta 12611928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 18381508 - 18381468
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  18381508 tagaattttttaacaaaacatgaattaaatatgaattttta 18381468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 27251814 - 27251854
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  27251814 tagaattttttaccaaaacatgaattaaatatgaattttta 27251854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 1379038 - 1378999
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  1379038 tagaattttttaacaaaacatgaattaaatatgaattttt 1378999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 26062380 - 26062341
Alignment:
Q  281 tagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  26062380 tagattttttaacaaaacatgaattaaatatgaattttta 26062341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 26068119 - 26068080
Alignment:
Q  281 tagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  26068119 tagattttttaacaaaacatgaattaaatatgaattttta 26068080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 40141388 - 40141349
Alignment:
Q  281 tagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  40141388 tagaatttttaacgaaacatgaattaaatatgaattttta 40141349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 6649575 - 6649609
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  6649575 tttttaacaaaacatgaattaaatatgaattttta 6649609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 8811345 - 8811311
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  8811345 tttttaacaaaacatgaattaaatatgaattttta 8811311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 21108785 - 21108743
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  21108785 aatagaattttttaacaaaacatgaatttaatatgaattttta 21108743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 27281998 - 27282040
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  27281998 aatagaattttttaacaaaacatgaattaaatatgaatgttta 27282040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 29387196 - 29387162
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  29387196 tttttaacaaaacatgaattaaatatgaattttta 29387162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 37342584 - 37342622
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaatttt 318  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  37342584 tagaattttttaccaaaacatgaattaaatatgaatttt 37342622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 39751457 - 39751491
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  39751457 tttttaacaaaacatgaattaaatatgaattttta 39751491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 40073565 - 40073531
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  40073565 tttttaacaaaacatgaattaaatatgaattttta 40073531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 40141302 - 40141336
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  40141302 tttttaacaaaacatgaattaaatatgaattttta 40141336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 317
Target Start/End: Original strand, 32347924 - 32347957
Alignment:
Q  284 aattttttacaaaacatgaattaaatatgaattt 317  Q
    ||||||| ||||||||||||||||||||||||||    
T  32347924 aatttttaacaaaacatgaattaaatatgaattt 32347957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Complemental strand, 34129873 - 34129840
Alignment:
Q  287 tttttacaaaacatgaattaaatatgaattttta 320  Q
    |||| |||||||||||||||||||||||||||||    
T  34129873 ttttaacaaaacatgaattaaatatgaattttta 34129840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 39541735 - 39541702
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  39541735 tttttaacaaaacatgaattaaatatgaattttt 39541702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 1378944 - 1378984
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  1378944 tagaattttttaccaaaacatgaattaaatatgaatcttta 1378984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 5475597 - 5475557
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  5475597 tagaattttttaacaaaacatgaatttaatatgaattttta 5475557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 5612624 - 5612664
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  5612624 tagaattttttaacaaaacatgaatttaatatgaattttta 5612664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 6706715 - 6706675
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaatttt 318  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  6706715 aatagaattttttaacgaaacatgaattaaatatgaatttt 6706675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 8811257 - 8811297
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  8811257 tagaattttttaacaaaacataaattaaatatgaattttta 8811297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 9536579 - 9536619
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  9536579 tagaattttttaacaaaacataaattaaatatgaattttta 9536619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 11752892 - 11752932
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  11752892 tagaattttttaacaaaacatgaatttaatatgaattttta 11752932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 14786779 - 14786739
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  14786779 tagaattttttaacaaaacatgaatttaatatgaattttta 14786739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 16675661 - 16675633
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  16675661 acaaaacatgaattaaatatgaattttta 16675633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 316
Target Start/End: Complemental strand, 17158287 - 17158251
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaatt 316  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17158287 tagaattttttatcaaaacatgaattaaatatgaatt 17158251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 18115549 - 18115509
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  18115549 tagaactttttaccaaaacatgaattaaatatgaattttta 18115509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 20579642 - 20579682
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  20579642 tagaattttttaacaaaacatgaatttaatatgaattttta 20579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 22083331 - 22083291
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  22083331 tagaattttttaacaaaacatgaatttaatatgaattttta 22083291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 316
Target Start/End: Original strand, 26336481 - 26336517
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaatt 316  Q
    |||||||||||| ||||||||||||||||||||||||    
T  26336481 tagaattttttaacaaaacatgaattaaatatgaatt 26336517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 28720518 - 28720558
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  28720518 tagaattttttaacaaaacatgaatttaatatgaattttta 28720558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 32400852 - 32400812
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  32400852 tagaattttttaacaaaacatgaatttaatatgaattttta 32400812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 32901662 - 32901702
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  32901662 tagaattttttaacaaaacataaattaaatatgaattttta 32901702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 33537136 - 33537176
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  33537136 tagaattttttaacaaaacatgaatttaatatgaattttta 33537176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 34423122 - 34423082
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  34423122 tagaattttttaacaaaacatgaatttaatatgaattttta 34423082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 36741648 - 36741688
Alignment:
Q  281 tagaatttttt-acaaaacatgaattaaatatgaattttta 320  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  36741648 tagaattttttgacaaaacatgaatttaatatgaattttta 36741688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 36741742 - 36741702
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  36741742 tagaattttttaacaaaacataaattaaatatgaattttta 36741702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 38203790 - 38203750
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  38203790 tagaattttttaacaaaacatgaatttaatatgaattttta 38203750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 39007815 - 39007855
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  39007815 tagaattttttaacaaaacatgaatttaatatgaattttta 39007855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 41438061 - 41438101
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  41438061 tagaattttttaacaaaacatgaatttaatatgaattttta 41438101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 44537627 - 44537667
Alignment:
Q  281 tagaattttttaca-aaacatgaattaaatatgaattttta 320  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  44537627 tagaattttttacccaaacatgaattaaatatgaattttta 44537667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 45134048 - 45134008
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  45134048 tagaattgtttaccaaaacatgaattaaatatgaattttta 45134008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 27237619 - 27237742
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||| |||||| ||  |||| ||||||||||    
T  27237619 gaaatcaaatcggggaagaagaaaaggaaagtccgatggagtgatggtgatggaacgcgtggtatcagagagatagagaaaaattaatttttttttagtg 27237718  T
Q  100 gtctagtacttagtagtactattg 123  Q
    |  ||||||||| |||| ||||||    
T  27237719 gggtagtacttattagtgctattg 27237742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 7398357 - 7398165
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggta-tagagagaaagagaataagaaattgttttttagtg 99  Q
    |||||||||||||||| ||||||||||| |||  |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||  | |||||||| |    
T  7398357 gaaatcaaatcggggatgaagaaaaggagagtccgatggagtgatgttgatggaacgcgtggtattagagagaaagaaaataagaa--ttttttttag-g 7398261  T
Q  100 gtctagtacttagtagtactattggactttatattt--tttaggttcataccttggggaggcccaggttcattgaactcttagcacatcccaaggt 193  Q
    |  |||||||||||||||||| ||| || || ||||  ||||||  |||||||||||||||| ||| | |||||| ||| | ||||| ||||||||    
T  7398260 gggtagtacttagtagtactactgggctataaattttatttaggcccataccttggggaggctcagctccattgagctcgttgcacaccccaaggt 7398165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23020678 - 23020764
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaa 86  Q
    ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  23020678 gaaatcaaatcggggaagaagaaaaggaaagtccgatggaatgatggtgatggaacgcgtggtatcagagagaaagagaataagaaa 23020764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26917878 - 26918001
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaat---tgtttttta 96  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||||||| ||| | |||||| ||| |||||||||||||||||    | |||||||    
T  26917878 gaaatcaaatcggggaagatgaaaagtaaagtctgatggagtgatggtgatgaaacacatggtatcagatagaaagagaataagaaaaatctttttttta 26917977  T
Q  97 gtggtctagtacttagtagtacta 120  Q
    ||||  ||||||||||||||||||    
T  26917978 gtggggtagtacttagtagtacta 26918001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23858979 - 23858892
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaatt 88  Q
    |||||||||| |||||||||||||||||| || ||||| ||||||||||||||||||| |||||| |||||||||||||||||| ||||    
T  23858979 gaaatcaaattggggaagaagaaaaggaa-gtctgatgcagtgatggtgatggaacgcgtggtatcagagagaaagagaataaggaatt 23858892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 20153109 - 20152986
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    |||||||||||||||||||||||||  |||||   ||||||||||||||||||||||  |||||| |||||||||||||| |||||  | |||||||||     
T  20153109 gaaatcaaatcggggaagaagaaaaacaaagtccaatggagtgatggtgatggaacgtgtggtatcagagagaaagagaacaagaatgttttttttagta 20153010  T
Q  100 gtctagtacttagtagtactattg 123  Q
    |  ||||  |||||||||||||||    
T  20153009 ggatagtgtttagtagtactattg 20152986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 12419693 - 12419894
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgt-tttttagt 98  Q
    ||||||||||||| |||||| |||||||||||  |||||||||||||||||||||||| |||||| |||||||||      |||||||| | ||||||||    
T  12419693 gaaatcaaatcggagaagaaaaaaaggaaagtccgatggagtgatggtgatggaacgcatggtatcagagagaaa------aagaaattttgtttttagt 12419786  T
Q  99 ggtctagtacttagtagtactattggacttta-tattttttaggttcataccttggggaggcccaggttcattgaactcttagcacatcccaaggtacgg 197  Q
     |  ||||||||||||||| ||  || || || | |||||||||  |||||||||| ||||||| | | |||||||||| | ||| | |||||||| | |    
T  12419787 agggtagtacttagtagtattaccggcctatatttttttttaggcccataccttggtgaggcccggttccattgaactccttgcagaccccaaggt-ccg 12419885  T
Q  198 gccctgctc 206  Q
    |||||||||    
T  12419886 gccctgctc 12419894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 3730808 - 3730770
Alignment:
Q  279 aatagaattttttacaaaacatgaattaaatatgaattt 317  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  3730808 aatagaatttttaacaaaacatgaattaaatatgaattt 3730770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 320
Target Start/End: Original strand, 18803577 - 18803615
Alignment:
Q  282 agaattttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  18803577 agaatttttaacaaaacatgaattaaatatgaattttta 18803615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 1730613 - 1730573
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  1730613 tagaattttttaccaaaacatgaattaaatatgaattttta 1730573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 2394180 - 2394220
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  2394180 tagaattttttaacaaaacatgaattaaatatgaattttta 2394220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 9328207 - 9328167
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  9328207 tagaattttttaccaaaacatgaattaaatatgaattttta 9328167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 21973808 - 21973768
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  21973808 tagaattttttaccaaaacatgaattaaatatgaattttta 21973768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 48154239 - 48154279
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  48154239 tagaattttttaccaaaacatgaattaaatatgaattttta 48154279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 5851577 - 5851616
Alignment:
Q  281 tagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  5851577 tagaatttttaacaaaacatgaatttaatatgaattttta 5851616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 21973714 - 21973753
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  21973714 tagaattttttaacaaaacatgaattaaatatgaattttt 21973753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 32611540 - 32611579
Alignment:
Q  281 tagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  32611540 tagaatttttaacaaaacataaattaaatatgaattttta 32611579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 42913758 - 42913719
Alignment:
Q  281 tagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  42913758 tagaatttttaacaaaacataaattaaatatgaattttta 42913719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 48154333 - 48154294
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  48154333 tagaattttttaacaaaacatgaattaaatatgaattttt 48154294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 5072515 - 5072481
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||||| |||||||||||||||||||    
T  5072515 ttttttacaaaacataaattaaatatgaattttta 5072481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 9014930 - 9014988
Alignment:
Q  105 gtacttagtagtactattggact-ttatattttttaggttcataccttggggaggccca 162  Q
    |||||||||||||||||||| || | || ||||||||| |||||||||| |||||||||    
T  9014930 gtacttagtagtactattgggctataattttttttaggctcataccttgcggaggccca 9014988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 21804329 - 21804295
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  21804329 tttttaacaaaacatgaattaaatatgaattttta 21804295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 37378932 - 37378974
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  37378932 aatagaattttttaacaaaacattaattaaatatgaattttta 37378974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 41013839 - 41013797
Alignment:
Q  279 aatagaattttttacaaaa-catgaattaaatatgaattttta 320  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  41013839 aatataattttttacaaaaacatgaattaaatatgaattttta 41013797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 43333014 - 43333056
Alignment:
Q  279 aatagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  43333014 aatagaattttttactaaaacattaattaaatatgaattttta 43333056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 43725762 - 43725804
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  43725762 aatagaattttttagcaaaacataaattaaatatgaattttta 43725804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 21707045 - 21707012
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  21707045 tttttaacaaaacatgaattaaatatgaattttt 21707012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 28555058 - 28555025
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  28555058 tttttaacaaaacatgaattaaatatgaattttt 28555025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 36678277 - 36678318
Alignment:
Q  279 aatagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||  ||||||||| |||||||||    
T  36678277 aatagaattttttacaaaacaaaaattaaatacgaattttta 36678318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 41320884 - 41320851
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  41320884 tttttaacaaaacatgaattaaatatgaattttt 41320851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 44481678 - 44481637
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  44481678 aatagaattttttaactaaacatgaattaaatatgaattttt 44481637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 2963282 - 2963242
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  2963282 tagaattttttaacaaaacatgaatttaatatgaattttta 2963242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 3671116 - 3671156
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  3671116 tagaattttttaacaaaacatgaatttaatatgaattttta 3671156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 11290322 - 11290362
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  11290322 tagaattttttaacaaaacatgaatttaatatgaattttta 11290362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 13471822 - 13471782
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  13471822 tagaattttttaacaaaacatgaatttaatatgaattttta 13471782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 15076319 - 15076359
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  15076319 tagaattttttaacaaaacatgaatttaatatgaattttta 15076359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 18683265 - 18683237
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  18683265 acaaaacatgaattaaatatgaattttta 18683237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 19228484 - 19228524
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  19228484 tagaattttttaacaaaacatgaatttaatatgaattttta 19228524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 19919540 - 19919500
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  19919540 tagaattttttaacaaaacatgaatttaatatgaattttta 19919500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 21832322 - 21832282
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  21832322 tagaattttttaacaaaacatgaatttaatatgaattttta 21832282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 25784758 - 25784798
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  25784758 tagaattttttaacaaaacataaattaaatatgaattttta 25784798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 26157689 - 26157729
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  26157689 tagaattttttaacaaaacatgaatttaatatgaattttta 26157729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 29128121 - 29128081
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  29128121 tagaattttttaacaaaacataaattaaatatgaattttta 29128081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 32436759 - 32436719
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  32436759 tagaattttttaacaaaacatgaatttaatatgaattttta 32436719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 34327105 - 34327145
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  34327105 tagaattttttaacaaaacatgaatttaatatgaattttta 34327145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 35471867 - 35471827
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  35471867 tagaagtttttaccaaaacatgaattaaatatgaattttta 35471827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 38778068 - 38778108
Alignment:
Q  281 tagaattttttacaaaa-catgaattaaatatgaattttta 320  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  38778068 tagaattttttaaaaaaacatgaattaaatatgaattttta 38778108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 40056269 - 40056297
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  40056269 acaaaacatgaattaaatatgaattttta 40056297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 43301693 - 43301733
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  43301693 tagaattttttaacaaaacatgaatttaatatgaattttta 43301733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 43725858 - 43725818
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  43725858 tagaattttttaacaaaacatgaatttaatatgaattttta 43725818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 45864136 - 45864176
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  45864136 tagaattttttaacaaaacataaattaaatatgaattttta 45864176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 45864230 - 45864190
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  45864230 tagaattttttaacaaaacatgaatttaatatgaattttta 45864190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 45986926 - 45986886
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  45986926 tagaattttttaacaaaacatgaatttaatatgaattttta 45986886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 47272855 - 47272895
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  47272855 tagaatttttgaccaaaacatgaattaaatatgaattttta 47272895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 26279449 - 26279283
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgt-tttttagt 98  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  |||||| |||||||||||||||||| |||| | | ||||||    
T  26279449 gaaatcaaatcggggatgaagaaaaggaaagtttgttggagtgatggtgatggaacgtgtggtatcagagagaaagagaataaggaattttgtgtttagt 26279350  T
Q  99 ggtctagtacttagtagtactattggacttta--tattttttaggttcataccttggggaggcccag 163  Q
    ||  ||||| |||||||||||| ||  || ||  | ||||||||  ||||||| |||||||||||||    
T  26279349 ggagtagtatttagtagtactactgagctataatttttttttagactcataccctggggaggcccag 26279283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42453321 - 42453257
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat 65  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||    
T  42453321 gaaatcaaatcggggaagaagaaaaggaaagtctgatagagtgatggtgatggaacgcgtggtat 42453257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 52374573 - 52374509
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat 65  Q
    |||||||||| ||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||    
T  52374573 gaaatcaaattggggaagaagaaaaggaaagtctgataaagtgatggtgatggaacgcgtggtat 52374509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 15007362 - 15007322
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  15007362 tagaattttttaccaaaacatgaattaaatatgaattttta 15007322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 23550944 - 23550904
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  23550944 tagaattttttaccaaaacatgaattaaatatgaattttta 23550904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 31401444 - 31401484
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  31401444 tagaattttttaccaaaacatgaattaaatatgaattttta 31401484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 33463565 - 33463525
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  33463565 tagaattttttaccaaaacatgaattaaatatgaattttta 33463525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 37671590 - 37671630
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  37671590 tagaattttttaacaaaacatgaattaaatatgaattttta 37671630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 39176872 - 39176912
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  39176872 tagaattttttaacaaaacatgaattaaatatgaattttta 39176912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 40007037 - 40007077
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  40007037 tagaattttttaccaaaacatgaattaaatatgaattttta 40007077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 46486503 - 46486467
Alignment:
Q  281 tagaattttttacaaaacatgaattaaatatgaattt 317  Q
    |||||||||| ||||||||||||||||||||||||||    
T  46486503 tagaatttttaacaaaacatgaattaaatatgaattt 46486467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 49083610 - 49083570
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  49083610 tagaattttttaccaaaacatgaattaaatatgaattttta 49083570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 53582760 - 53582720
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  53582760 tagaattttttaccaaaacatgaattaaatatgaattttta 53582720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 319
Target Start/End: Complemental strand, 26370085 - 26370050
Alignment:
Q  284 aattttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||||| ||||||||||||||||||||||||||||    
T  26370085 aatttttaacaaaacatgaattaaatatgaattttt 26370050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 45779102 - 45779059
Alignment:
Q  278 taatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  45779102 taatagaattttttaactaaacatgaattaaatatgaattttta 45779059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 52169413 - 52169371
Alignment:
Q  279 aatagaatttttt--acaaaacatgaattaaatatgaattttt 319  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  52169413 aatagaatttttttaacaaaacatgaattaaatatgaattttt 52169371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 4229617 - 4229575
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  4229617 aatagaattttttaacaaaacatgaatttaatatgaattttta 4229575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 8150898 - 8150932
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  8150898 tttttaacaaaacatgaattaaatatgaattttta 8150932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 25588054 - 25588020
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  25588054 tttttaacaaaacatgaattaaatatgaattttta 25588020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 30430422 - 30430460
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaatttt 318  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  30430422 tagaattttttaacaaaacatgaattaaatatgaatttt 30430460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 37169848 - 37169886
Alignment:
Q  281 tagaattttttacaaaacatgaattaaatatgaattttt 319  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  37169848 tagaatttttaacaaaacataaattaaatatgaattttt 37169886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 41993018 - 41992984
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  41993018 tttttaacaaaacatgaattaaatatgaattttta 41992984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 42737644 - 42737686
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  42737644 aatagaatttgttaacaaaacatgaattaaatatgaattttta 42737686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 43545200 - 43545158
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  43545200 aatagaattttttaacaaaacatgaatttaatatgaattttta 43545158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 48180565 - 48180607
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  48180565 aatagaattttttaacaaaacatgaatttaatatgaattttta 48180607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 49221054 - 49221012
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  49221054 aatagaattttttaacaaaacataaattaaatatgaattttta 49221012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 55204733 - 55204691
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  55204733 aatagaattttttatcaaagcatgaattaaatatgaattttta 55204691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 3918365 - 3918398
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  3918365 tttttaacaaaacatgaattaaatatgaattttt 3918398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 18386350 - 18386387
Alignment:
Q  281 tagaattttttacaaaacatgaattaaatatgaatttt 318  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  18386350 tagaatttttaacaaaagatgaattaaatatgaatttt 18386387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 26257012 - 26256971
Alignment:
Q  279 aatagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||| |||||||||||||||| |||||    
T  26257012 aatagaatttttaacaaaatatgaattaaatatgaaatttta 26256971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 33254671 - 33254704
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  33254671 tttttaacaaaacatgaattaaatatgaattttt 33254704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 33463477 - 33463510
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  33463477 tttttaacaaaacatgaattaaatatgaattttt 33463510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 41992928 - 41992969
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  41992928 aatagaattttttaacaaaacatgaatttaatatgaattttt 41992969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 52252805 - 52252838
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  52252805 tttttaacaaaacatgaattaaatatgaattttt 52252838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 55379039 - 55379006
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  55379039 tttttaacaaaacatgaattaaatatgaattttt 55379006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 2928397 - 2928357
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  2928397 tagaattttttaacaaaacttgaattaaatatgaattttta 2928357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 7865185 - 7865225
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  7865185 tagaattttttaacaaaacataaattaaatatgaattttta 7865225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 8150986 - 8150946
Alignment:
Q  281 tagaattttt-tacaaaacatgaattaaatatgaattttta 320  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  8150986 tagaatttttgtacaaaacataaattaaatatgaattttta 8150946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 9110856 - 9110816
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  9110856 tagaattttttaacaaaacatgaattaaatataaattttta 9110816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 9253982 - 9254022
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  9253982 tagaattttttaacaaaacatgaatttaatatgaattttta 9254022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 10522947 - 10522987
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  10522947 tagaattttttaacaaaacataaattaaatatgaattttta 10522987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 19227918 - 19227878
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  19227918 tagaattttttaacaaaacatgaatttaatatgaattttta 19227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 21863986 - 21863946
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  21863986 tagaattttttaacaaaacatgaatttaatatgaattttta 21863946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 22721569 - 22721597
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  22721569 acaaaacatgaattaaatatgaattttta 22721597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 25396471 - 25396511
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  25396471 tagaattttttagcaaaacataaattaaatatgaattttta 25396511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 26859608 - 26859568
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  26859608 tagaattttttaacaaaacatgaatttaatatgaattttta 26859568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 30640663 - 30640703
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  30640663 tagaattttttaacaaaacatgaatttaatatgaattttta 30640703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 31311184 - 31311144
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| ||||||||||| |||||||||||||||    
T  31311184 tagaattttttaccaaaacatgaatcaaatatgaattttta 31311144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 33629752 - 33629792
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  33629752 tagaattttttaacaaaacatgaattacatatgaattttta 33629792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 35107694 - 35107722
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  35107694 acaaaacatgaattaaatatgaattttta 35107722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 318
Target Start/End: Complemental strand, 35107772 - 35107740
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaatttt 318  Q
    ||||| |||||||||||||||||||||||||||    
T  35107772 tttttaacaaaacatgaattaaatatgaatttt 35107740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 37568596 - 37568636
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  37568596 tagaattttttaacaaaacatgaatttaatatgaattttta 37568636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 38472409 - 38472449
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  38472409 tagaattttttaacaaaacatgaatttaatatgaattttta 38472449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 39330030 - 39329990
Alignment:
Q  279 aatagaattttttac-aaaacatgaattaaatatgaatttt 318  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  39330030 aatagaattttttaataaaacatgaattaaatatgaatttt 39329990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 39996398 - 39996438
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  39996398 tagaattttttaacaaaacataaattaaatatgaattttta 39996438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 41187530 - 41187490
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  41187530 tagaattttttaacaaaacatgaatttaatatgaattttta 41187490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 42629068 - 42629028
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  42629068 tagaattttttaacaaaacatgaatttaatatgaattttta 42629028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 43081343 - 43081383
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  43081343 tagaattttttaacaaaacatgaatttaatatgaattttta 43081383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 43140710 - 43140750
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  43140710 tagaattttttaacaaaacataaattaaatatgaattttta 43140750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 43974214 - 43974254
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  43974214 tagaattttttaacaaaacatgaatttaatatgaattttta 43974254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 45474664 - 45474704
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  45474664 tagaattttttaacaaaacatgaatttaatatgaattttta 45474704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 46291299 - 46291259
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  46291299 tagaattttttaacaaaacatgaattaaatatgaaatttta 46291259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 46710526 - 46710486
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  46710526 tagaattttttaacaaaacatgaatttaatatgaattttta 46710486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 47360746 - 47360706
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  47360746 tagaattttttaacaaaacataaattaaatatgaattttta 47360706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 47450959 - 47450999
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  47450959 tagaattttttaacaaaacatgaatttaatatgaattttta 47450999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 47865524 - 47865496
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  47865524 acaaaacatgaattaaatatgaattttta 47865496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 50660768 - 50660808
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  50660768 tagaattttttaacaaaacataaattaaatatgaattttta 50660808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 318
Target Start/End: Complemental strand, 51842363 - 51842331
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaatttt 318  Q
    ||||| |||||||||||||||||||||||||||    
T  51842363 tttttaacaaaacatgaattaaatatgaatttt 51842331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 52169316 - 52169356
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  52169316 tagaattttttaccaaaacataaattaaatatgaattttta 52169356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 52459919 - 52459959
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  52459919 tagaattttttaccaaaacatgaaataaatatgaattttta 52459959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 53594536 - 53594576
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  53594536 tagaattttttaacaaaacatgaatttaatatgaattttta 53594576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 54184608 - 54184568
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  54184608 tagaattttttaacaaaacatgaatttaatatgaattttta 54184568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 54279782 - 54279742
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  54279782 tagaattttttaacaaaacatgaatttaatatgaattttta 54279742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 54617559 - 54617599
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  54617559 tagaattttttaacaaaacatgaatttaatatgaattttta 54617599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 55378951 - 55378991
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  55378951 tagaattttttaccaaaacataaattaaatatgaattttta 55378991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 193
Target Start/End: Original strand, 39134920 - 39135119
Alignment:
Q  2 aaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaa-----ttgtttttt 95  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||||||  |||||||| ||     || ||||||    
T  39134920 aaatcaaatcggggaagaagaaaaggaaaatctgatggagtgatggtgatggaacgcatggtatcagagagaa--agaataaggaaatttgttttttttt 39135017  T
Q  96 agtggtctagtacttagtagtactattggact----ttatattttttaggttcataccttggggaggcccaggttcattgaactcttagcacatcccaag 191  Q
    | |||  |||||||||||||||||| ||| ||    || | ||||| |||  |||||||||||||||||||| | |||||| ||||| ||||| ||||||    
T  39135018 actggggtagtacttagtagtactactgggctataattttgtttttgaggcccataccttggggaggcccagttccattgagctctttgcacaccccaag 39135117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10926140 - 10926223
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggta-tagagagaaagagaataag 83  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||  ||||||||||||||||||    
T  10926140 gaaatcaaatcggagaagaagaaaaggaaagtctgatggagtgatggtgatggaacgcatggtaccagagagaaagagaataag 10926223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26803866 - 26803784
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggta-tagagagaaagagaataa 82  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |  |||| ||||||||||||||||||    
T  26803866 gaaatcaaatcgggaaagaagaaaagaaaagtctgatggagtgatggtgatggaacacgcggtattagagagaaagagaataa 26803784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 2119366 - 2119324
Alignment:
Q  279 aatagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  2119366 aatagaattttttaccaaaacatgaattaaatatgaattttta 2119324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 4618348 - 4618390
Alignment:
Q  279 aatagaattttttacaaaa-catgaattaaatatgaattttta 320  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  4618348 aatagaattttttacaaaaacatgaattaaatatgaattttta 4618390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 46939502 - 46939460
Alignment:
Q  279 aatagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  46939502 aatagaattttttaccaaaacatgaattaaatatgaattttta 46939460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 4618446 - 4618405
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  4618446 aatagaattttttaacaaaacatgaattaaatatgaattttt 4618405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 52510705 - 52510664
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  52510705 aatagaattttttaacaaaacatgaattaaatatgaattttt 52510664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 91585 - 91545
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  91585 tagaattttttaacaaaacatgaattaaatatgaattttta 91545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 4761365 - 4761405
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  4761365 tagaattttttaccaaaacatgaattaaatatgaattttta 4761405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 7236847 - 7236887
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  7236847 tagaattttttaccaaaacatgaattaaatatgaattttta 7236887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 10555891 - 10555851
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  10555891 tagaattttttaccaaaacatgaattaaatatgaattttta 10555851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 12300632 - 12300592
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  12300632 tagaattttttaccaaaacatgaattaaatatgaattttta 12300592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 21701397 - 21701357
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  21701397 tagaattttttaccaaaacatgaattaaatatgaattttta 21701357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 46947265 - 46947225
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  46947265 tagaattttttaccaaaacatgaattaaatatgaattttta 46947225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 52510609 - 52510649
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  52510609 tagaattttttaccaaaacatgaattaaatatgaattttta 52510649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 7236941 - 7236902
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  7236941 tagaattttttaacaaaacatgaattaaatatgaattttt 7236902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 8760062 - 8760023
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  8760062 tagaattttttaacaaaacatgaattaaatatgaattttt 8760023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 12300538 - 12300577
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  12300538 tagaattttttaacaaaacatgaattaaatatgaattttt 12300577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 41885257 - 41885296
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  41885257 tagaattttttaacaaaacatgaattaaatatgaattttt 41885296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 46947693 - 46947732
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  46947693 tagaattttttaacaaaacatgaattaaatatgaattttt 46947732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 1377421 - 1377379
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  1377421 aatagaattttttaacaaaacatgaatttaatatgaattttta 1377379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 1607772 - 1607738
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  1607772 tttttaacaaaacatgaattaaatatgaattttta 1607738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 15600528 - 15600494
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  15600528 tttttaacaaaacatgaattaaatatgaattttta 15600494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 17992189 - 17992231
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  17992189 aatagaattttttaacaaaacatgaatttaatatgaattttta 17992231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 18520799 - 18520841
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  18520799 aatagaattttttaacaaaacataaattaaatatgaattttta 18520841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 34941420 - 34941386
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  34941420 tttttaacaaaacatgaattaaatatgaattttta 34941386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 35796131 - 35796165
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  35796131 tttttaacaaaacatgaattaaatatgaattttta 35796165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 52556340 - 52556382
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  52556340 aatagaattttttaacaaaacatgaatttaatatgaattttta 52556382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 14083217 - 14083250
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  14083217 tttttaacaaaacatgaattaaatatgaattttt 14083250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 14292504 - 14292463
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  14292504 aatagaattttttaacaaaacatgaattcaatatgaattttt 14292463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 17632963 - 17632930
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  17632963 tttttaacaaaacatgaattaaatatgaattttt 17632930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 20754524 - 20754561
Alignment:
Q  284 aattttttac-aaaacatgaattaaatatgaattttta 320  Q
    |||||||||| |||||||||||||||||||||||||||    
T  20754524 aattttttaccaaaacatgaattaaatatgaattttta 20754561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 20754609 - 20754576
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  20754609 tttttaacaaaacatgaattaaatatgaattttt 20754576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 26821083 - 26821050
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  26821083 tttttaacaaaacatgaattaaatatgaattttt 26821050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 32589886 - 32589919
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  32589886 tttttaacaaaacatgaattaaatatgaattttt 32589919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 320
Target Start/End: Original strand, 52826749 - 52826790
Alignment:
Q  280 atagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  52826749 atagaattttttaacaaaacatgaatttaatatgaattttta 52826790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 538699 - 538739
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  538699 tagaattttttaacaaaacatgaatttaatatgaattttta 538739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 316
Target Start/End: Complemental strand, 3592418 - 3592382
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaatt 316  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3592418 tagaattttttaacaaaacatgaattaaatatgaatt 3592382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 3751555 - 3751595
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  3751555 tagaattttttaacaaaacatgaatttaatatgaattttta 3751595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 5186667 - 5186627
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  5186667 tagaattttttaacaaaacatgaatttaatatgaattttta 5186627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 5731157 - 5731185
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  5731157 acaaaacatgaattaaatatgaattttta 5731185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 6401905 - 6401865
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  6401905 tagaattttttaacaaaacatgaatttaatatgaattttta 6401865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 6785769 - 6785729
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  6785769 tagaattttttaacaaaacattaattaaatatgaattttta 6785729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 6789025 - 6788985
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  6789025 tagaattttttaacaaaacataaattaaatatgaattttta 6788985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 8819247 - 8819207
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaatttt 318  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  8819247 aatagaattttttaacaaaccatgaattaaatatgaatttt 8819207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 9003895 - 9003935
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  9003895 tagaattttttaacaaaacataaattaaatatgaattttta 9003935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 318
Target Start/End: Original strand, 9479075 - 9479107
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaatttt 318  Q
    ||||| |||||||||||||||||||||||||||    
T  9479075 tttttaacaaaacatgaattaaatatgaatttt 9479107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 9780433 - 9780393
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  9780433 tagaattttttaacaaaacataaattaaatatgaattttta 9780393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 14292408 - 14292448
Alignment:
Q  281 tagaattttttacaa-aacatgaattaaatatgaattttta 320  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  14292408 tagaattttttaccataacatgaattaaatatgaattttta 14292448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 14420797 - 14420757
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  14420797 tagaattttttaacaaaacatgaatttaatatgaattttta 14420757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 16987975 - 16988015
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  16987975 tagaattttttaacaaaacatgaatttaatatgaattttta 16988015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 19910818 - 19910858
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  19910818 tagaattttttaacaaaacatgaatttaatatgaattttta 19910858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 20748749 - 20748709
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  20748749 tagaattttttaacaaaacatgaatttaatatgaattttta 20748709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 21276408 - 21276448
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  21276408 tagaattttttaacaaaacataaattaaatatgaattttta 21276448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 26820995 - 26821035
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  26820995 tagaattttttaccaaaacatgaattaaatataaattttta 26821035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 27494886 - 27494926
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||||||| |||||||||||||||    
T  27494886 tagaattttttaacaaaacatgaatcaaatatgaattttta 27494926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 30222237 - 30222209
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  30222237 acaaaacatgaattaaatatgaattttta 30222209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 30364091 - 30364051
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  30364091 tagaattttttaacaaaacataaattaaatatgaattttta 30364051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 30800789 - 30800761
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  30800789 acaaaacatgaattaaatatgaattttta 30800761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 33056235 - 33056275
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  33056235 tagaattttttaacaaaacatgaatttaatatgaattttta 33056275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 33417783 - 33417755
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  33417783 acaaaacatgaattaaatatgaattttta 33417755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 33826172 - 33826200
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  33826172 acaaaacatgaattaaatatgaattttta 33826200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 33879246 - 33879274
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  33879246 acaaaacatgaattaaatatgaattttta 33879274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 36783172 - 36783212
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  36783172 tagaattttttaccaaaacatgaattaaatataaattttta 36783212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 40434554 - 40434594
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  40434554 tagaattttttaacaaaacatgaatttaatatgaattttta 40434594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 43226885 - 43226925
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  43226885 tagaattttttaacaaaacatgaatttaatatgaattttta 43226925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 44778685 - 44778645
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  44778685 tagaattttttaacaaaacatgaatttaatatgaattttta 44778645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 45143766 - 45143806
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  45143766 tagaattttttaacaaaacatgaatttaatatgaattttta 45143806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 46634753 - 46634793
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  46634753 tagaattttttaacaaaacatgaatttaatatgaattttta 46634793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 47844171 - 47844131
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  47844171 tagaattttttaacaaaacatgaatttaatatgaattttta 47844131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 48411341 - 48411301
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  48411341 tagaattttttaacaaaacatgaatttaatatgaattttta 48411301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 49580155 - 49580195
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  49580155 tagaattttttaacaaaacatgaatttaatatgaattttta 49580195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 52468197 - 52468070
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagt- 98  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||  | || |||||||||     
T  52468197 gaaatgaaatcggggaagaaaaaaaggaaagtctgatggagtgatggtgatggaacgcgtggtatcagagagaaagagaataatgactt-ttttttagtg 52468099  T
Q  99 ggtctagtacttagtagtactattggact 127  Q
    ||  |||||||||||||||||| ||||||    
T  52468098 gggttagtacttagtagtactactggact 52468070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40217141 - 40217017
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggta---tagagagaaagagaataagaaattgt--ttttt 95  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||  |   |||||||||||||||||||||||| |  |||||    
T  40217141 gaaatcaaatcggggaagaagaaaaggaaagtctgatggagtgatggtgatggaacacatgtgatattagagagaaagagaataagaaatttttgttttt 40217042  T
Q  96 agtggtctagtacttagtagtacta 120  Q
    |||||  ||||| ||||||||||||    
T  40217041 agtggggtagtatttagtagtacta 40217017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 36118653 - 36118771
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| |||||| || |||||| |||||||||||||||||  |||| ||||||||||    
T  36118653 gaaatcaaatcggggaagaagaaaaggaaagtccgatggagtgatggtaatggaaagcgtggtatcagagagaaagagaataatgaatttttttttagtg 36118752  T
Q  100 gtctagtacttagtagtac 118  Q
       | ||||||||||||||    
T  36118753 tggtggtacttagtagtac 36118771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 37746917 - 37747028
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||| | || |||||| ||||||||||| |||||||||||  |||||||||    
T  37746917 gaaatcaaatcggg-aagaagaaaaggaaagtccgatggagtgatggtgatggtatgcgtggtatcagagagaaagataataagaaatttgtttttagtg 37747015  T
Q  100 gtctagtacttag 112  Q
    |  ||||||||||    
T  37747016 gggtagtacttag 37747028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2135514 - 2135588
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtatagagagaaag 75  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||| |||| | ||||||||||| ||||    
T  2135514 gaaatcaaatcggggaagaagaaaaggaaagtctgatggagtgatgatgattgaacacatggtatagagacaaag 2135588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39329600 - 39329688
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaatt 88  Q
    |||||||||||  ||||||||||||||||||| |||| |||||||| |||| |||||| |||||| |||||||||||||||||| ||||    
T  39329600 gaaatcaaatcatggaagaagaaaaggaaagtctgattgagtgatgatgatagaacgcgtggtatcagagagaaagagaataaggaatt 39329688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27111942 - 27111825
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    ||||||||||| | |||||||||||||||||| ||| ||||||||||||| |||| || |||||| ||||| |||||||||||| |    ||||||| ||    
T  27111942 gaaatcaaatcagagaagaagaaaaggaaagtctgacggagtgatggtgaaggaaagcgtggtatcagagataaagagaataagga---tttttttaatg 27111846  T
Q  100 gtctagtacttagtagtacta 120  Q
    |  ||||||||||||||||||    
T  27111845 gggtagtacttagtagtacta 27111825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 36363066 - 36363185
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    ||||||||||| |||||||||||||| ||||| |||| |||||||| |  || ||||| |||| | | ||||||||||||||| | | ||||||||||||    
T  36363066 gaaatcaaatcagggaagaagaaaagaaaagtctgatagagtgatgatagtgaaacgcgtggtttcaaagagaaagagaataa-agaatgttttttagtg 36363164  T
Q  100 gtctagtacttagtagtacta 120  Q
    |  ||||||||||||||||||    
T  36363165 gggtagtacttagtagtacta 36363185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 24396835 - 24396765
Alignment:
Q  14 ggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataag 83  Q
    ||||||||||||| ||||| |||  |||||||||||||||||||||| |||| ||||||||||||||||||    
T  24396835 ggaagaagaaaagaaaagtatgagagagtgatggtgatggaacgcttagtatcagagagaaagagaataag 24396765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 15735007 - 15734885
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaat--aagaaattgttttttag 97  Q
    ||||||||||||| ||||||||||| ||| ||   ||| |||||| |||||||||||| |||||| | ||||||| |||||  || |||||  |||||||    
T  15735007 gaaatcaaatcggagaagaagaaaacgaatgtccaatgaagtgatagtgatggaacgcgtggtatcaaagagaaaaagaataaaaaaaatttgtttttag 15734908  T
Q  98 tggtctagtacttagtagtacta 120  Q
    |||  ||||||||||||||||||    
T  15734907 tggggtagtacttagtagtacta 15734885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 4894235 - 4894277
Alignment:
Q  279 aatagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  4894235 aatagaattttttaccaaaacatgaattaaatatgaattttta 4894277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 4168081 - 4168126
Alignment:
Q  13 gggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgc 58  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||    
T  4168081 gggaagaagaaaagggaagtcagatggagtgatggtgatggaacgc 4168126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 33270225 - 33270266
Alignment:
Q  279 aatagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  33270225 aatagaattttttacgaagcatgaattaaatatgaattttta 33270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 34100761 - 34100802
Alignment:
Q  279 aatagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  34100761 aatagaatttttaacaaaacatgaatcaaatatgaattttta 34100802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 5092834 - 5092794
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  5092834 tagaattttttaccaaaacatgaattaaatatgaattttta 5092794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 24284966 - 24285006
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  24284966 tagaattttttaccaaaacatgaattaaatatgaattttta 24285006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 29146024 - 29146064
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  29146024 tagaattttttaacaaaacatgaattaaatatgaattttta 29146064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 34403024 - 34402984
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  34403024 tagaattttttaccaaaacatgaattaaatatgaattttta 34402984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 38103822 - 38103862
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  38103822 tagaattttttaccaaaacatgaattaaatatgaattttta 38103862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 49013438 - 49013478
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  49013438 tagaattttttaccaaaacatgaattaaatatgaattttta 49013478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 13483001 - 13482958
Alignment:
Q  278 taatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  13483001 taattgaattttttaacaaaacatgaattaaatatgaattttta 13482958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 49333714 - 49333675
Alignment:
Q  282 agaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  49333714 agaattttttaacaaaacatgaattaaatatgaattttta 49333675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 50677212 - 50677295
Alignment:
Q  7 aaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgc----ttggtat-agagagaaagagaataagaaa 86  Q
    |||||||||||||||||||| ||||   ||||||||||||||||||||| ||     |||||| |||||||||||||||||||||    
T  50677212 aaatcggggaagaagaaaag-aaagaccgatggagtgatggtgatggaatgcgtggatggtatcagagagaaagagaataagaaa 50677295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 51627052 - 51627013
Alignment:
Q  281 tagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  51627052 tagaattttttaacaaacatgaattaaatatgaattttta 51627013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 285 - 320
Target Start/End: Original strand, 56302552 - 56302587
Alignment:
Q  285 attttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||| |||||||||||||||||||||||||||||    
T  56302552 atttttaacaaaacatgaattaaatatgaattttta 56302587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 4053651 - 4053609
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  4053651 aatagaattttttaacaaaacataaattaaatatgaattttta 4053609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 7744599 - 7744557
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  7744599 aatagaatttgttaacaaaacatgaattaaatatgaattttta 7744557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 8168399 - 8168433
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  8168399 tttttaacaaaacatgaattaaatatgaattttta 8168433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 13030610 - 13030644
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  13030610 tttttaacaaaacatgaattaaatatgaattttta 13030644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 25593964 - 25593930
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  25593964 tttttaacaaaacatgaattaaatatgaattttta 25593930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 29963286 - 29963320
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  29963286 tttttaacaaaacatgaattaaatatgaattttta 29963320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 39407707 - 39407673
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  39407707 tttttaacaaaacatgaattaaatatgaattttta 39407673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 39652497 - 39652459
Alignment:
Q  282 agaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  39652497 agaattttttaacaaaacatgaattaaatatgaattttt 39652459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 39910798 - 39910840
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  39910798 aatagaatttgttaacaaaacatgaattaaatatgaattttta 39910840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 41827569 - 41827527
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  41827569 aatagaattttataacaaaacatgaattaaatatgaattttta 41827527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 43440211 - 43440177
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  43440211 tttttaacaaaacatgaattaaatatgaattttta 43440177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 48471735 - 48471777
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  48471735 aatagaattttttaacaaaacataaattaaatatgaattttta 48471777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 48736357 - 48736319
Alignment:
Q  283 gaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  48736357 gaattttttaccaaaacatgaattaaatatgaattttta 48736319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 52439137 - 52439095
Alignment:
Q  279 aatagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  52439137 aatagaattttttaataaaacatgaattaaatatgaattttta 52439095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 2472830 - 2472789
Alignment:
Q  279 aatagaattttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||| ||||||||||| |||||||    
T  2472830 aatagaatttttaacaaaacataaattaaatatggattttta 2472789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 11987419 - 11987456
Alignment:
Q  284 aattttttac-aaaacatgaattaaatatgaattttta 320  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11987419 aattttttaccaaaacatgaattaaatatgaattttta 11987456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 34374211 - 34374244
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  34374211 tttttaacaaaacatgaattaaatatgaattttt 34374244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 50618808 - 50618841
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    |||||||||||||||||||||||||||| |||||    
T  50618808 ttttttacaaaacatgaattaaatatgatttttt 50618841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 1825844 - 1825804
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  1825844 tagaattttttaacaaaacatgaatttaatatgaattttta 1825804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 1829186 - 1829146
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  1829186 tagaattttttaacaaaacatgaatttaatatgaattttta 1829146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 1924265 - 1924305
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  1924265 tagaattttttaacaaaacatgaatttaatatgaattttta 1924305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 2904806 - 2904846
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  2904806 tagaattttttaacaaaacatgaatttaatatgaattttta 2904846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 3614037 - 3613997
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  3614037 tagaattttttaacaaaacatgaatttaatatgaattttta 3613997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 6213158 - 6213118
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  6213158 tagaattttttaacaaaacatgaatttaatatgaattttta 6213118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 7111402 - 7111442
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  7111402 tagaattttttaacaaaacatgaatttaatatgaattttta 7111442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 8080282 - 8080322
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  8080282 tagaattttttaacaaaacatgaatttaatatgaattttta 8080322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 9370163 - 9370203
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  9370163 tagaattttttaacaaaacatgaatttaatatgaattttta 9370203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 318
Target Start/End: Original strand, 12591365 - 12591397
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaatttt 318  Q
    ||||| |||||||||||||||||||||||||||    
T  12591365 tttttaacaaaacatgaattaaatatgaatttt 12591397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 319
Target Start/End: Original strand, 16078434 - 16078466
Alignment:
Q  287 tttttacaaaacatgaattaaatatgaattttt 319  Q
    |||| ||||||||||||||||||||||||||||    
T  16078434 ttttaacaaaacatgaattaaatatgaattttt 16078466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 16078521 - 16078481
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  16078521 tagaattttttaccaaaacatgaattaaatataaattttta 16078481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 22008255 - 22008215
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  22008255 tagaattttttaacaaaacatgaatttaatatgaattttta 22008215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 22224284 - 22224244
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  22224284 tagaattttttaacaaaacatgaatttaatatgaattttta 22224244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 23623965 - 23624005
Alignment:
Q  281 tagaattttttacaaa-acatgaattaaatatgaattttta 320  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  23623965 tagaattttttaccaacacatgaattaaatatgaattttta 23624005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 318
Target Start/End: Original strand, 25810766 - 25810798
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaatttt 318  Q
    ||||| |||||||||||||||||||||||||||    
T  25810766 tttttaacaaaacatgaattaaatatgaatttt 25810798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 26618627 - 26618667
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  26618627 tagaattttttaacaaaacatgaatttaatatgaattttta 26618667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 26917993 - 26918033
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  26917993 tagaattttttaacaaaacatgaatttaatatgaattttta 26918033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 27285266 - 27285306
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  27285266 tagaattttttaacaaaacatgaatttaatatgaattttta 27285306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 28567817 - 28567857
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  28567817 tagaattttttaacaaaacatgaatttaatatgaattttta 28567857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 30031693 - 30031733
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  30031693 tagaattttttaacaaaacatgaatttaatatgaattttta 30031733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 31079130 - 31079170
Alignment:
Q  279 aatagaattttttacaaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| ||||||||| ||||||||||||| ||||    
T  31079130 aatagaatttttaacaaaacataaattaaatatgaaatttt 31079170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 32801005 - 32801045
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  32801005 tagaattttttaacaaaacatgaatttaatatgaattttta 32801045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 35120213 - 35120173
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  35120213 tagaattttttaacaaaacatgaatttaatatgaattttta 35120173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 39652404 - 39652444
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  39652404 tagaattttttaccaaaacatgaattaagtatgaattttta 39652444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 47805169 - 47805209
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  47805169 tagaattttttaacaaaacatgaatttaatatgaattttta 47805209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 47812302 - 47812342
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  47812302 tagaattttttaacaaaacatgaatttaatatgaattttta 47812342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 318
Target Start/End: Complemental strand, 49458960 - 49458928
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaatttt 318  Q
    ||||| |||||||||||||||||||||||||||    
T  49458960 tttttaacaaaacatgaattaaatatgaatttt 49458928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 318
Target Start/End: Original strand, 50683352 - 50683384
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaatttt 318  Q
    ||||| |||||||||||||||||||||||||||    
T  50683352 tttttaacaaaacatgaattaaatatgaatttt 50683384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 52960257 - 52960297
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  52960257 tagaattttttaacaaaacaagaattaaatatgaattttta 52960297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 55811361 - 55811321
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  55811361 tagaattttttaacaaaacatgaatttaatatgaattttta 55811321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 56365334 - 56365374
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  56365334 tagaattttttaacaaaacataaattaaatatgaattttta 56365374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 15167610 - 15167731
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttt-tttagt 98  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||| |||||| ||||||||| | |||||| |||| ||| ||||||    
T  15167610 gaaatcaaatcggagaagaagaaaaggaaagtctgatagagtgatggtgatggaacgcgtggtatcagagagaaaaataataaggaattttttatttagt 15167709  T
Q  99 ggtctagtacttagtagtacta 120  Q
    ||   |||||||||||||||||    
T  15167710 ggggaagtacttagtagtacta 15167731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 34048904 - 34049076
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgt--tttttag 97  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||  ||||||||||||||||  |||| |  |||||||    
T  34048904 gaaatcaaatcggggaagaagaaaaggaaagtccgatggagtgatggtgatggaacgcgtggtatcggagagaaagagaataatgaatttttgtttttag 34049003  T
Q  98 tggtctagtacttagtagtactattggactttatattttttaggttcataccttggggaggcccaggttcatt 170  Q
    | |  |||||||||||||| ||| ||| || ||  ||||||| | ||||||| | ||||| | ||| ||||||    
T  34049004 tagggtagtacttagtagttctactgggctataatttttttaagctcataccatagggagacacagtttcatt 34049076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15078666 - 15078547
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttt-tttagt 98  Q
    ||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||| |||||| ||||||||| | |||||| |||| ||| ||||||    
T  15078666 gaaatcaaatcggagaagaagaaaatgaaagtctgatagagtgatggtgatggaacgcgtggtatcagagagaaaaataataaggaattttttatttagt 15078567  T
Q  99 ggtctagtacttagtagtac 118  Q
    ||  ||||||||||||||||    
T  15078566 ggggtagtacttagtagtac 15078547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8646106 - 8646024
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataa 82  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||| |||||| ||||| |||||| ||||||||||| |||||    
T  8646106 gaaatcaaatcagggaagaagaaaatgaaagtatgatggagtgatagtgatgaaacgcgtggtatcagagagaaagaaaataa 8646024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38009333 - 38009384
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatg 52  Q
    ||||| |||||||  ||||||||||||||||| |||||||||||||||||||    
T  38009333 gaaattaaatcggacaagaagaaaaggaaagtatgatggagtgatggtgatg 38009384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 14148601 - 14148643
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  14148601 aatagaattttttaacaaaacatgaattaaatatgaattttta 14148643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 1770028 - 1770068
Alignment:
Q  281 tagaattttttacaaaa-catgaattaaatatgaattttta 320  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  1770028 tagaattttttacaaaaacatgaattaaatatgaattttta 1770068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 10605713 - 10605673
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  10605713 tagaattttttaacaaaacatgaattaaatatgaattttta 10605673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 27141220 - 27141180
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  27141220 tagaattttttaccaaaacatgaattaaatatgaattttta 27141180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 38009479 - 38009539
Alignment:
Q  133 ttttttaggttcataccttggggaggcccaggttcattgaactcttagcacatcccaaggt 193  Q
    ||||||||||||||||||||||||||| ||| | |||||| |||||  |||| ||||||||    
T  38009479 ttttttaggttcataccttggggaggctcagctccattgagctctttacacaccccaaggt 38009539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 38656418 - 38656378
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  38656418 tagaattttttaacaaaacatgaattaaatatgaattttta 38656378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41677370 - 41677426
Alignment:
Q  1 gaaatcaaatcggggaagaag-aaaaggaaagtttgatggagtgatggtgatggaac 56  Q
    ||||||||||||||||||||| ||||| ||||||  ||| |||||||||||||||||    
T  41677370 gaaatcaaatcggggaagaagaaaaagaaaagttcaatgtagtgatggtgatggaac 41677426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 319
Target Start/End: Original strand, 1047455 - 1047490
Alignment:
Q  284 aattttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||||| ||||||||||||||||||||||||||||    
T  1047455 aatttttaacaaaacatgaattaaatatgaattttt 1047490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 1770122 - 1770083
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  1770122 tagaattttttaacaaaacatgaattaaatatgaattttt 1770083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 13013146 - 13013189
Alignment:
Q  278 taatagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  13013146 taatagaattttttaccaaaacatgaattaaatatgaactttta 13013189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 13013243 - 13013204
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  13013243 tagaattttttaacaaaacatgaattaaatatgaattttt 13013204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 40668729 - 40668690
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  40668729 tagaattttttaacaaaacatgaattaaatatgaattttt 40668690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 2433718 - 2433752
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  2433718 tttttaacaaaacatgaattaaatatgaattttta 2433752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 4052736 - 4052770
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  4052736 tttttaacaaaacatgaattaaatatgaattttta 4052770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 7762026 - 7761984
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  7762026 aatagaattttttagcaaaacataaattaaatatgaattttta 7761984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 14148725 - 14148691
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  14148725 tttttaacaaaacatgaattaaatatgaattttta 14148691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 18595978 - 18596012
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||| ||||||||||||||    
T  18595978 ttttttacaaaacatgaatttaatatgaattttta 18596012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 33316511 - 33316469
Alignment:
Q  279 aatagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  33316511 aatagaattttttaccaaaatatgaattaaatatgaattttta 33316469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 42148746 - 42148704
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  42148746 aatagaatttgttaacaaaacatgaattaaatatgaattttta 42148704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 26615618 - 26615585
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  26615618 tttttaacaaaacatgaattaaatatgaattttt 26615585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 27141131 - 27141164
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  27141131 tttttaacaaaacatgaattaaatatgaattttt 27141164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 30465874 - 30465841
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  30465874 tttttaacaaaacatgaattaaatatgaattttt 30465841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 317
Target Start/End: Original strand, 34010544 - 34010581
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattt 317  Q
    |||||||||||| |||||||||||||||||||||||||    
T  34010544 tagaattttttaacaaaacatgaattaaatatgaattt 34010581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 125250 - 125290
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  125250 tagaattttttaacaaaacatgaatttaatatgaattttta 125290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 616057 - 616097
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  616057 tagaattttttaacaaaacatgaatttaatatgaattttta 616097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 622450 - 622490
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  622450 tagaattttttaacaaaacatgaatttaatatgaattttta 622490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 4586441 - 4586481
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  4586441 tagaattttttaacaaaacataaattaaatatgaattttta 4586481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 5059871 - 5059911
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  5059871 tagaattttttaacaaaacatgaatttaatatgaattttta 5059911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 8525490 - 8525530
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  8525490 tagaattttttaacaaaacatgaatttaatatgaattttta 8525530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 8878634 - 8878594
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  8878634 tagaattttttaacaaaacatgaattaaatatgaaatttta 8878594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 9407195 - 9407155
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  9407195 tagaattttttaacaaagcatgaattaaatatgaattttta 9407155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 9639529 - 9639569
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  9639529 tagaattttttagcaaaacataaattaaatatgaattttta 9639569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 10983467 - 10983503
Alignment:
Q  284 aattttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  10983467 aatttttaacaaaacataaattaaatatgaattttta 10983503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 11096929 - 11096889
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  11096929 tagaattttttaacaaaacatgaatttaatatgaattttta 11096889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 13574912 - 13574884
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  13574912 acaaaacatgaattaaatatgaattttta 13574884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 14395516 - 14395556
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  14395516 tagaattttttaacaaaacatgaatttaatatgaattttta 14395556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 18252676 - 18252716
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  18252676 tagaattttttaacaaaacatgaatttaatatgaattttta 18252716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 18558303 - 18558263
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  18558303 tagaattttttaacaaaacataaattaaatatgaattttta 18558263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 19164615 - 19164643
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  19164615 acaaaacatgaattaaatatgaattttta 19164643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 26063612 - 26063572
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  26063612 tagaattttttaacaaaacatgaatttaatatgaattttta 26063572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 26151327 - 26151355
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  26151327 acaaaacatgaattaaatatgaattttta 26151355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 26544071 - 26544111
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  26544071 tagaattttttaacaaaacatgaatttaatatgaattttta 26544111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 316
Target Start/End: Complemental strand, 27751483 - 27751447
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaatt 316  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27751483 tagaattttttaacaaaacatgaattaaatatgaatt 27751447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 28192667 - 28192627
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  28192667 tagaattttttaacaaaacataaattaaatatgaattttta 28192627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 30025724 - 30025684
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  30025724 tagaattttttaacaaaacatgaatttaatatgaattttta 30025684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 34114993 - 34114953
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  34114993 tagaattttttaacaaaacatgaatttaatatgaattttta 34114953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 35575177 - 35575137
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  35575177 tagaattttttaacaaaacatgaatttaatatgaattttta 35575137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 35821988 - 35821948
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  35821988 tagaattttttaccaaaacatgaattaaatataaattttta 35821948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 37411819 - 37411859
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  37411819 tagaattttttaacaaaacatgaattaaatataaattttta 37411859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 38009387 - 38009438
Alignment:
Q  46 ggtgatggaacgcttggtat--agagagaaagagaataagaaattgtttttt 95  Q
    ||||||||||||| ||||||  |||||||||||||||||| |||| ||||||    
T  38009387 ggtgatggaacgcatggtatcaagagagaaagagaataaggaattttttttt 38009438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 40668635 - 40668675
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  40668635 tagaattttttaccaaaatatgaattaaatatgaattttta 40668675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 42309652 - 42309692
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  42309652 tagaattttttaacaaaacatgaatttaatatgaattttta 42309692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 42641126 - 42641166
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  42641126 tagaattttttaacaaaacatgaatttaatatgaattttta 42641166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 42668224 - 42668264
Alignment:
Q  281 tagaatttttt-acaaaacatgaattaaatatgaattttta 320  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  42668224 tagaattttttcacaaaacataaattaaatatgaattttta 42668264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 42668306 - 42668278
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  42668306 acaaaacatgaattaaatatgaattttta 42668278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 44060705 - 44060745
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  44060705 tagaattttttaacaaaacatgaatttaatatgaattttta 44060745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 44724486 - 44724446
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  44724486 tagaattttttaacaaaacatgaatttaatatgaattttta 44724446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 1262 - 1143
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttt-tttagt 98  Q
    ||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||| |||||| ||||||||| | |||||| |||| ||| ||||||    
T  1262 gaaatcaaatcggagaagaagaaaatgaaagtctgatagagtgatggtgatggaacgcgtggtatcagagagaaaaataataaggaattttttatttagt 1163  T
Q  99 ggtctagtacttagtagtac 118  Q
    ||  ||||||||||||||||    
T  1162 ggggtagtacttagtagtac 1143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 173707 - 173790
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtatagagagaaagagaataaga 84  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||| | ||| ||||||||||| |||||||||||||    
T  173707 gaaatcaaatcagggaagaagaaaaggaaagtctgatggaatgatggtgatgaagcgcgtggtatagagaaaaagagaataaga 173790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 20611699 - 20611604
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgtttttt 95  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||| ||| | ||||||||||||||| ||| | ||||||    
T  20611699 gaaatcaaatcggggaagaagaaaaggaaagtctgatggagcaatggtgatggaacgcttgatatcatagagaaagagaataaaaaaatatttttt 20611604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2477780 - 2477898
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaataagaaattgttttttagtg 99  Q
    ||||||||||| | |||||||||||||||||| ||| ||||||||||||| |||| || |||||| ||||| |||||||||||| |  | ||||||| ||    
T  2477780 gaaatcaaatcagagaagaagaaaaggaaagtctgacggagtgatggtgaaggaaagcgtggtatcagagataaagagaataagga--ttttttttaatg 2477877  T
Q  100 gtctagtacttagtagtacta 120  Q
    |  ||||||||||||||||||    
T  2477878 gggtagtacttagtagtacta 2477898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 30756760 - 30756802
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  30756760 aatagaattttttaacaaaacatgaattaaatatgaattttta 30756802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 22734268 - 22734309
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  22734268 aatagaattttttaacaaaacatgaattaaatatgaattttt 22734309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 7269084 - 7269044
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  7269084 tagaattttttaccaaaacatgaattaaatatgaattttta 7269044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 7575883 - 7575923
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  7575883 tagaattttttaccaaaacatgaattaaatatgaattttta 7575923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 22734364 - 22734324
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  22734364 tagaattttttaccaaaacatgaattaaatatgaattttta 22734324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 26682974 - 26682934
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  26682974 tagaattttttaccaaaacatgaattaaatatgaattttta 26682934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 33858496 - 33858536
Alignment:
Q  281 tagaattttttac-aaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  33858496 tagaattttttaccaaaacatgaattaaatatgaattttta 33858536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 7575978 - 7575939
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  7575978 tagaattttttaacaaaacatgaattaaatatgaattttt 7575939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 17545174 - 17545135
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttt 319  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  17545174 tagaattttttaacaaaacatgaattaaatatgaattttt 17545135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 32820233 - 32820199
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  32820233 tttttaacaaaacatgaattaaatatgaattttta 32820199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 34327767 - 34327734
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  34327767 tttttaacaaaacatgaattaaatatgaattttt 34327734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 1336826 - 1336786
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  1336826 tagaattttttaacaaaacatgaatttaatatgaattttta 1336786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 1962658 - 1962618
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  1962658 tagaattttttaacaaaacatgaatttaatatgaattttta 1962618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 8440304 - 8440344
Alignment:
Q  281 tagaattttttacaaa-acatgaattaaatatgaattttta 320  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  8440304 tagaattttttaccaatacatgaattaaatatgaattttta 8440344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 8677938 - 8677898
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  8677938 tagaattttttaacaaaacatgaatttaatatgaattttta 8677898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 9550494 - 9550534
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  9550494 tagaattttttaacaaaacatgaatttaatatgaattttta 9550534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 12149089 - 12149049
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  12149089 tagaattttttaacaaaacataaattaaatatgaattttta 12149049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 13648807 - 13648779
Alignment:
Q  292 acaaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||||||||||||||||||    
T  13648807 acaaaacatgaattaaatatgaattttta 13648779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 19680656 - 19680696
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  19680656 tagaattttttaacaaaacatgaatttaatatgaattttta 19680696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 32245132 - 32245172
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  32245132 tagaattttttaacaaaacatgaatttaatatgaattttta 32245172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 32400749 - 32400709
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  32400749 tagaattttttaacaaaacatgaatttaatatgaattttta 32400709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 32820146 - 32820186
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  32820146 tagaattttttaacaaaacattaattaaatatgaattttta 32820186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 34188081 - 34188041
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  34188081 tagaattttttaacaaaatatgaattaaatatgaattttta 34188041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 34674400 - 34674360
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  34674400 tagaattttttaacaaaacatgaatttaatatgaattttta 34674360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 34921124 - 34921164
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  34921124 tagaattttttaacaaaacatgaatttaatatgaattttta 34921164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 231056 - 231137
Alignment:
Q  1 gaaatcaaatcggggaagaagaaaaggaaagtttgatggagtgatggtgatggaacgcttggtat-agagagaaagagaata 81  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| | |||||| ||||||||||||||||    
T  231056 gaaatcaaatcagggaagaagaaaaggaaagtctgatggagtgatgttgatggaacacatggtatcagagagaaagagaata 231137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 3418 - 3458
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  3418 tagaattttttatcaaaacatgaattaaatatgaattttta 3458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 3506 - 3473
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  3506 tttttaacaaaacatgaattaaatatgaattttt 3473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 34626 - 34586
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  34626 tagaattttttaacaaaacatgaattaaatatgaattttta 34586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 18277 - 18235
Alignment:
Q  279 aatagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  18277 aatagaattttttaacaaaacatgaatttaatatgaattttta 18235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 1015 - 975
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  1015 tagaattttttaacaaaacatgaatttaatatgaattttta 975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 12000 - 11966
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttta 320  Q
    ||||||||||||||| |||||||||||||||||||    
T  12000 ttttttacaaaacataaattaaatatgaattttta 11966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 2798 - 2832
Alignment:
Q  282 agaattttttacaaaacatgaattaaatatgaatt 316  Q
    ||||||||| |||||||||||||||||||||||||    
T  2798 agaatttttaacaaaacatgaattaaatatgaatt 2832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 21674 - 21707
Alignment:
Q  286 ttttttacaaaacatgaattaaatatgaattttt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  21674 tttttaacaaaacatgaattaaatatgaattttt 21707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0936 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 854 - 894
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  854 tagaattttttaacaaaacatgaatttaatatgaattttta 894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 6474 - 6514
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  6474 tagaattttttaacaaaacatgaatttaatatgaattttta 6514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 37662 - 37702
Alignment:
Q  281 tagaatttttta-caaaacatgaattaaatatgaattttta 320  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  37662 tagaattttttaacaaaacatgaatttaatatgaattttta 37702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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