View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19438_low_43 (Length: 269)
Name: NF19438_low_43
Description: NF19438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19438_low_43 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 11 - 252
Target Start/End: Complemental strand, 34437029 - 34436786
Alignment:
| Q |
11 |
ttatactaactgttttgtacatggaaaaaatcttcatgcattatacatttgagctttgttaataagtagcgtcattctttattgtatatggggaaaaata |
110 |
Q |
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| T |
34437029 |
ttatactaactgttttgtacatggaaaaaatcttcatgcactatacatttgagctttgttaataagtagcgtcattctttattgtatatggggaaaaata |
34436930 |
T |
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| Q |
111 |
aaagag--gaaaaacataaagttgagttcatcaaccttttccttttgacctggaggattactttctaaaacaaggagataacaacaaaaatataagacat |
208 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
34436929 |
aaagagaggaaaaacataaagttgagttcatcaaccttttccttttgacctggaggattactttctacaacaaggagataacaacaaaaatataagacat |
34436830 |
T |
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| Q |
209 |
aaagattgtaaatccttgattccttccatctagatcgcacatat |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34436829 |
aaagattgtaaatccttgattccttccatctagatcgcacatat |
34436786 |
T |
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