View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19438_low_44 (Length: 269)
Name: NF19438_low_44
Description: NF19438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19438_low_44 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 10 - 253
Target Start/End: Complemental strand, 25504001 - 25503757
Alignment:
| Q |
10 |
attattctcagacattataaatttcttgaaaacaatggtggtgttagtagttgcataaactaaactcatggtaaatcggcccaatataggaggaaaaaa- |
108 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25504001 |
attattctcagacattataaatttcttgaaaacaatggaggtgttagtagttgcataaactaaactcatggtaaatcggcccaatataggaggaaaaaaa |
25503902 |
T |
|
| Q |
109 |
cccgcgttgagagaaggacagtaccgtcttttcataatatagggtttagtttagtatatgaaccctaaaaattctcaaccttgaaacttgagcgtgccga |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25503901 |
cccgcgttgagagaaggacagtaccgtcttttcataatatagggtttagtttagtatatgaaccctaaaaattctcaaccttgaaacttgagcgtgccga |
25503802 |
T |
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| Q |
209 |
ttgtgatttttggggaggaagaggaaatcgcagcgaagacaaaaa |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25503801 |
ttgtgatttttggggaggaagaggaaatcgcagcgaagacaaaaa |
25503757 |
T |
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