View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19438_low_8 (Length: 498)

Name: NF19438_low_8
Description: NF19438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19438_low_8
NF19438_low_8
[»] chr4 (57 HSPs)
chr4 (10-482)||(29320992-29321468)
chr4 (231-348)||(52298116-52298233)
chr4 (150-362)||(8439431-8439643)
chr4 (142-303)||(55866111-55866271)
chr4 (151-243)||(10203630-10203723)
chr4 (132-243)||(32063662-32063774)
chr4 (139-289)||(41582444-41582595)
chr4 (151-224)||(39667119-39667193)
chr4 (142-293)||(29320029-29320183)
chr4 (137-243)||(30641515-30641620)
chr4 (142-243)||(32062589-32062691)
chr4 (141-243)||(11446269-11446372)
chr4 (141-243)||(40316989-40317092)
chr4 (141-243)||(40327063-40327166)
chr4 (141-289)||(30642426-30642575)
chr4 (140-224)||(39539263-39539348)
chr4 (141-289)||(40388386-40388535)
chr4 (141-300)||(14801735-14801895)
chr4 (168-243)||(8438307-8438382)
chr4 (142-283)||(7280209-7280351)
chr4 (141-282)||(40387466-40387608)
chr4 (151-224)||(50504168-50504242)
chr4 (151-224)||(54858903-54858977)
chr4 (141-224)||(11448074-11448158)
chr4 (137-300)||(16605597-16605761)
chr4 (140-222)||(7451832-7451915)
chr4 (405-452)||(8439366-8439413)
chr4 (137-215)||(43155850-43155929)
chr4 (139-289)||(50418665-50418816)
chr4 (151-224)||(3032591-3032665)
chr4 (151-224)||(5818118-5818192)
chr4 (151-224)||(11523958-11524032)
chr4 (138-243)||(41583557-41583663)
chr4 (151-224)||(45463082-45463156)
chr4 (152-224)||(10408232-10408305)
chr4 (148-300)||(54086964-54087117)
chr4 (148-300)||(15507942-15508094)
chr4 (194-306)||(56014778-56014890)
chr4 (140-286)||(24349672-24349819)
chr4 (139-281)||(55867402-55867545)
chr4 (151-224)||(27068919-27068993)
chr4 (151-224)||(27069253-27069327)
chr4 (151-224)||(54858569-54858643)
chr4 (141-221)||(24711110-24711191)
chr4 (140-300)||(35508509-35508670)
chr4 (264-300)||(7452072-7452108)
chr4 (264-300)||(9144889-9144925)
chr4 (264-300)||(16006076-16006112)
chr4 (264-300)||(17356048-17356084)
chr4 (264-300)||(33247396-33247432)
chr4 (264-300)||(34837197-34837233)
chr4 (264-300)||(35028267-35028303)
chr4 (140-222)||(36009160-36009244)
chr4 (264-300)||(42738154-42738190)
chr4 (264-300)||(44967192-44967228)
chr4 (264-300)||(46661183-46661219)
chr4 (137-193)||(52909630-52909686)
[»] chr5 (39 HSPs)
chr5 (141-482)||(40149901-40150243)
chr5 (141-293)||(40148897-40149050)
chr5 (141-243)||(24141451-24141554)
chr5 (140-289)||(5993887-5994037)
chr5 (142-282)||(30096829-30096970)
chr5 (148-289)||(35512154-35512296)
chr5 (140-287)||(20840531-20840679)
chr5 (151-281)||(8875458-8875589)
chr5 (138-224)||(17544391-17544478)
chr5 (139-289)||(20814415-20814566)
chr5 (151-224)||(33871348-33871422)
chr5 (139-300)||(39453297-39453459)
chr5 (139-300)||(42067790-42067955)
chr5 (142-222)||(3529189-3529270)
chr5 (151-215)||(8875619-8875684)
chr5 (148-300)||(13362497-13362650)
chr5 (139-300)||(14194692-14194853)
chr5 (141-289)||(16157135-16157284)
chr5 (148-300)||(19892577-19892730)
chr5 (140-224)||(38475344-38475429)
chr5 (141-300)||(32242511-32242670)
chr5 (148-289)||(5024298-5024440)
chr5 (141-222)||(11761748-11761830)
chr5 (151-224)||(20152790-20152864)
chr5 (142-243)||(28771164-28771266)
chr5 (176-281)||(42063288-42063394)
chr5 (148-300)||(19892314-19892467)
chr5 (142-222)||(27587148-27587229)
chr5 (141-194)||(39453675-39453728)
chr5 (264-300)||(1506205-1506241)
chr5 (264-300)||(5024142-5024178)
chr5 (264-300)||(6301812-6301848)
chr5 (264-300)||(6757988-6758024)
chr5 (141-300)||(11047437-11047596)
chr5 (142-300)||(14848975-14849135)
chr5 (141-224)||(24547470-24547554)
chr5 (264-300)||(28770992-28771028)
chr5 (264-300)||(31482525-31482561)
chr5 (264-300)||(38475156-38475192)
[»] chr8 (37 HSPs)
chr8 (156-480)||(9337040-9337365)
chr8 (321-425)||(19381898-19382002)
chr8 (142-243)||(2535876-2535978)
chr8 (197-362)||(8747471-8747636)
chr8 (141-224)||(10749853-10749937)
chr8 (141-224)||(4995002-4995085)
chr8 (142-300)||(16388795-16388954)
chr8 (137-224)||(7983423-7983511)
chr8 (143-218)||(11763027-11763103)
chr8 (151-224)||(25124906-25124980)
chr8 (140-224)||(23698589-23698674)
chr8 (142-289)||(4405940-4406088)
chr8 (141-288)||(13186059-13186207)
chr8 (154-221)||(27500424-27500492)
chr8 (142-289)||(39071676-39071824)
chr8 (405-452)||(8747406-8747453)
chr8 (151-281)||(10445621-10445752)
chr8 (150-224)||(44664516-44664591)
chr8 (150-243)||(8746332-8746426)
chr8 (151-300)||(11674932-11675082)
chr8 (151-224)||(35634442-35634516)
chr8 (140-224)||(23663859-23663944)
chr8 (141-224)||(8316933-8317017)
chr8 (151-224)||(234083-234157)
chr8 (151-224)||(710494-710568)
chr8 (151-224)||(747706-747780)
chr8 (151-224)||(871601-871675)
chr8 (262-300)||(13186328-13186366)
chr8 (143-300)||(31873168-31873326)
chr8 (151-224)||(44664851-44664925)
chr8 (161-222)||(1425369-1425430)
chr8 (140-300)||(23663543-23663704)
chr8 (264-300)||(3041579-3041615)
chr8 (264-300)||(36928745-36928781)
chr8 (264-300)||(38845422-38845458)
chr8 (264-300)||(40775773-40775809)
chr8 (264-300)||(44406980-44407016)
[»] chr7 (50 HSPs)
chr7 (146-452)||(22827927-22828242)
chr7 (140-302)||(5457174-5457337)
chr7 (141-243)||(32687396-32687499)
chr7 (137-300)||(28469277-28469441)
chr7 (140-222)||(10092215-10092298)
chr7 (137-243)||(32688544-32688651)
chr7 (142-243)||(18855980-18856082)
chr7 (142-281)||(18087626-18087766)
chr7 (293-360)||(22245530-22245597)
chr7 (138-281)||(17886778-17886922)
chr7 (141-224)||(19204488-19204572)
chr7 (150-300)||(2640447-2640598)
chr7 (142-303)||(43123175-43123337)
chr7 (151-224)||(22081569-22081642)
chr7 (142-300)||(10935794-10935953)
chr7 (140-224)||(6764175-6764263)
chr7 (231-297)||(20567272-20567337)
chr7 (151-224)||(42618254-42618328)
chr7 (151-224)||(43266275-43266349)
chr7 (151-224)||(43266609-43266683)
chr7 (151-224)||(46205652-46205726)
chr7 (140-224)||(13050126-13050211)
chr7 (140-224)||(18086287-18086372)
chr7 (141-224)||(6571012-6571096)
chr7 (142-289)||(42731419-42731567)
chr7 (141-243)||(13384501-13384604)
chr7 (132-302)||(18670130-18670301)
chr7 (142-224)||(42362450-42362533)
chr7 (141-222)||(17102019-17102101)
chr7 (151-224)||(25453471-25453545)
chr7 (151-224)||(32068105-32068179)
chr7 (151-300)||(32680604-32680754)
chr7 (151-215)||(10600035-10600100)
chr7 (138-270)||(20425474-20425607)
chr7 (151-223)||(23058773-23058846)
chr7 (140-280)||(45010893-45011034)
chr7 (143-222)||(6253472-6253552)
chr7 (262-306)||(17885749-17885793)
chr7 (140-207)||(18855408-18855476)
chr7 (264-300)||(19204727-19204763)
chr7 (264-300)||(22871431-22871467)
chr7 (141-224)||(22871622-22871706)
chr7 (142-194)||(23608808-23608860)
chr7 (140-207)||(27396957-27397025)
chr7 (264-300)||(27991977-27992013)
chr7 (140-204)||(29144348-29144412)
chr7 (264-300)||(30948283-30948319)
chr7 (264-300)||(34928773-34928809)
chr7 (264-300)||(39686657-39686693)
chr7 (192-224)||(48789148-48789180)
[»] chr3 (44 HSPs)
chr3 (150-293)||(33154885-33155029)
chr3 (140-260)||(26718756-26718872)
chr3 (139-243)||(21186021-21186126)
chr3 (140-243)||(1078535-1078638)
chr3 (140-243)||(1079547-1079651)
chr3 (140-243)||(47856385-47856489)
chr3 (151-300)||(33156263-33156413)
chr3 (142-243)||(47857571-47857673)
chr3 (139-243)||(6956245-6956350)
chr3 (145-243)||(32431518-32431617)
chr3 (141-298)||(25107212-25107370)
chr3 (148-303)||(21783406-21783560)
chr3 (143-243)||(23276309-23276410)
chr3 (144-216)||(43607782-43607855)
chr3 (139-224)||(2796176-2796262)
chr3 (140-289)||(23458259-23458409)
chr3 (151-224)||(29118536-29118610)
chr3 (145-281)||(9368589-9368726)
chr3 (140-300)||(33689648-33689809)
chr3 (153-224)||(43998156-43998228)
chr3 (142-300)||(9294227-9294386)
chr3 (143-300)||(25108364-25108522)
chr3 (141-287)||(33689381-33689527)
chr3 (151-300)||(36314307-36314457)
chr3 (141-286)||(54317914-54318059)
chr3 (156-243)||(43608808-43608896)
chr3 (154-224)||(3469543-3469614)
chr3 (141-243)||(19741218-19741321)
chr3 (151-221)||(29118884-29118955)
chr3 (151-300)||(23457988-23458138)
chr3 (151-224)||(32306767-32306841)
chr3 (151-216)||(33506187-33506253)
chr3 (151-224)||(37778616-37778690)
chr3 (151-220)||(40788767-40788837)
chr3 (139-220)||(41988581-41988663)
chr3 (151-224)||(47551502-47551576)
chr3 (140-193)||(40758487-40758540)
chr3 (264-300)||(8041854-8041890)
chr3 (138-289)||(9367737-9367889)
chr3 (137-216)||(36418041-36418121)
chr3 (264-300)||(48322500-48322536)
chr3 (143-222)||(51994233-51994313)
chr3 (264-300)||(54466661-54466697)
chr3 (264-300)||(55052402-55052438)
[»] chr2 (34 HSPs)
chr2 (141-243)||(6589685-6589788)
chr2 (141-243)||(28230065-28230168)
chr2 (140-288)||(28228668-28228817)
chr2 (143-286)||(3653363-3653506)
chr2 (151-224)||(41587244-41587317)
chr2 (141-281)||(43741964-43742105)
chr2 (145-243)||(202682-202781)
chr2 (142-300)||(39423515-39423674)
chr2 (139-243)||(39936573-39936677)
chr2 (149-289)||(15848095-15848236)
chr2 (137-243)||(39935451-39935557)
chr2 (151-224)||(15604348-15604422)
chr2 (151-224)||(28226087-28226161)
chr2 (161-222)||(39498329-39498391)
chr2 (139-243)||(25231174-25231279)
chr2 (141-194)||(34447812-34447865)
chr2 (136-300)||(37895341-37895506)
chr2 (143-282)||(3652212-3652352)
chr2 (142-300)||(10712992-10713151)
chr2 (151-224)||(8710811-8710885)
chr2 (140-221)||(11163371-11163453)
chr2 (151-220)||(41588405-41588475)
chr2 (140-300)||(36382159-36382320)
chr2 (141-194)||(36382503-36382556)
chr2 (148-193)||(44713801-44713846)
chr2 (264-300)||(1695863-1695899)
chr2 (264-300)||(6658116-6658152)
chr2 (264-300)||(11163177-11163213)
chr2 (264-300)||(13995796-13995832)
chr2 (264-300)||(15848357-15848393)
chr2 (264-300)||(16099293-16099329)
chr2 (231-299)||(25893488-25893556)
chr2 (264-300)||(33062173-33062209)
chr2 (264-300)||(34448064-34448100)
[»] chr1 (52 HSPs)
chr1 (139-293)||(44522144-44522299)
chr1 (142-289)||(6367562-6367710)
chr1 (137-219)||(5734005-5734087)
chr1 (151-220)||(35038464-35038534)
chr1 (141-289)||(17662130-17662279)
chr1 (142-302)||(34850332-34850493)
chr1 (138-224)||(19515815-19515902)
chr1 (141-243)||(32132303-32132406)
chr1 (142-300)||(34464449-34464608)
chr1 (140-289)||(34464729-34464879)
chr1 (151-224)||(40714453-40714527)
chr1 (140-224)||(23209672-23209757)
chr1 (151-224)||(28325147-28325220)
chr1 (141-300)||(6367831-6367991)
chr1 (143-289)||(13914347-13914494)
chr1 (151-224)||(17188963-17189037)
chr1 (141-222)||(25647883-25647965)
chr1 (151-224)||(30326505-30326579)
chr1 (142-283)||(31197065-31197202)
chr1 (142-243)||(34849011-34849113)
chr1 (151-224)||(49955690-49955764)
chr1 (151-243)||(8898526-8898619)
chr1 (148-300)||(46163036-46163189)
chr1 (138-222)||(47999439-47999524)
chr1 (141-300)||(37578461-37578621)
chr1 (141-216)||(17661851-17661926)
chr1 (141-219)||(17691218-17691297)
chr1 (151-221)||(40714789-40714860)
chr1 (151-224)||(8898860-8898934)
chr1 (151-224)||(17189194-17189268)
chr1 (151-224)||(20760848-20760922)
chr1 (151-300)||(24905176-24905326)
chr1 (151-224)||(35040957-35041031)
chr1 (151-224)||(49955356-49955430)
chr1 (265-302)||(27998098-27998135)
chr1 (140-243)||(32133249-32133354)
chr1 (140-216)||(35473629-35473706)
chr1 (140-224)||(41098731-41098816)
chr1 (264-300)||(183344-183380)
chr1 (264-300)||(4716591-4716627)
chr1 (264-300)||(4960663-4960699)
chr1 (264-300)||(19017752-19017788)
chr1 (141-224)||(26024422-26024506)
chr1 (264-300)||(31514441-31514477)
chr1 (264-300)||(33442717-33442753)
chr1 (137-193)||(36694277-36694333)
chr1 (137-193)||(36710378-36710434)
chr1 (148-251)||(40439507-40439611)
chr1 (264-300)||(44523405-44523441)
chr1 (141-193)||(46899977-46900029)
chr1 (264-300)||(49722995-49723031)
chr1 (264-300)||(52134306-52134342)
[»] chr6 (33 HSPs)
chr6 (139-296)||(28498298-28498456)
chr6 (142-283)||(15116518-15116660)
chr6 (139-296)||(29810709-29810867)
chr6 (140-283)||(26463177-26463321)
chr6 (142-303)||(12407508-12407670)
chr6 (154-243)||(24210543-24210633)
chr6 (148-300)||(33517540-33517693)
chr6 (144-283)||(13378527-13378667)
chr6 (141-300)||(21627982-21628142)
chr6 (141-207)||(139807-139872)
chr6 (141-207)||(147828-147893)
chr6 (151-224)||(7905252-7905326)
chr6 (142-287)||(26464481-26464627)
chr6 (151-222)||(15913893-15913965)
chr6 (169-221)||(3176376-3176429)
chr6 (140-280)||(8090216-8090357)
chr6 (151-224)||(21836041-21836114)
chr6 (140-224)||(30337447-30337532)
chr6 (148-243)||(141066-141162)
chr6 (148-243)||(149087-149183)
chr6 (141-300)||(33517803-33517963)
chr6 (137-287)||(30726041-30726192)
chr6 (151-220)||(7160813-7160883)
chr6 (151-224)||(7905586-7905660)
chr6 (142-243)||(15115339-15115441)
chr6 (151-224)||(22502783-22502857)
chr6 (151-224)||(22503117-22503191)
chr6 (151-212)||(31406887-31406949)
chr6 (231-300)||(33647053-33647122)
chr6 (141-224)||(8089442-8089526)
chr6 (264-300)||(17734319-17734355)
chr6 (264-300)||(28000508-28000544)
chr6 (264-300)||(30804130-30804166)
[»] scaffold0008 (1 HSPs)
scaffold0008 (142-302)||(239818-239979)
[»] scaffold0220 (2 HSPs)
scaffold0220 (140-299)||(23229-23389)
scaffold0220 (141-298)||(24617-24775)
[»] scaffold0031 (1 HSPs)
scaffold0031 (142-289)||(68965-69113)
[»] scaffold0388 (1 HSPs)
scaffold0388 (151-281)||(12525-12656)
[»] scaffold0775 (1 HSPs)
scaffold0775 (148-281)||(6266-6400)
[»] scaffold0005 (1 HSPs)
scaffold0005 (141-300)||(37832-37992)
[»] scaffold0328 (1 HSPs)
scaffold0328 (151-281)||(11426-11557)
[»] scaffold0182 (1 HSPs)
scaffold0182 (231-297)||(31714-31780)
[»] scaffold0006 (1 HSPs)
scaffold0006 (151-224)||(221800-221873)
[»] scaffold0128 (1 HSPs)
scaffold0128 (148-221)||(19863-19937)
[»] scaffold0559 (1 HSPs)
scaffold0559 (264-300)||(1471-1507)
[»] scaffold0075 (1 HSPs)
scaffold0075 (264-300)||(14552-14588)


Alignment Details
Target: chr4 (Bit Score: 391; Significance: 0; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 10 - 482
Target Start/End: Complemental strand, 29321468 - 29320992
Alignment:
Q  10 ttattcttgcatggtacacaaaaatatttaccctctgtatcttgagcttatgattacgaacaaaaatatcctcttcgagttgatgtcgcttgtggtgcac 109  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29321468 ttattcttgcatggcacacaaaaatatttactctctgtatctggagcttatgattacgaacaaaaatatcctctccgagttgatgtcgcttgtggtgcac 29321369  T
Q  110 actttcctgtc---aaaaatgacataaatgaaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgtta 205  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  || |||||||||    
T  29321368 actttcctgtcctaaaaaatgacataaatgaaataggctttaatatgtgtttcgtccttgcaattaagggtcatttaaaaattggtttctataatcgtta 29321269  T
Q  206 attctggcaaattacccttttaaattttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgct 305  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29321268 attctggcaaattaccttttcaaattttaatcatttaagaattggttcctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgct 29321169  T
Q  306 atcacatcaaaactttacgtgaacggaccaaaatgcccctaaggttctcagacatacgtgtaatgaccgttttacccctaagttcatcttctccatcttc 405  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  29321168 atcacatcaaaattttacgtgaacggaccaaaatgcccctaaggttctcagacatacgtgtaatgaccgttttaccccttagttcatcttcttcatcttc 29321069  T
Q  406 atcttcaaaacccagcacaacaaccactaccatctcctccatcctcaaaaccagcagcatctttttcagtgtgttca 482  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29321068 atcttcaaaacccagcacaacagccactaccatctcctccatcctcaacaccagcagcatctttttcagtgtgttca 29320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 231 - 348
Target Start/End: Original strand, 52298116 - 52298233
Alignment:
Q  231 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaactttacgtgaacg 330  Q
    ||||||||||||| | || || ||||  || | ||||||||||||||||||||| | |||||||||||||||||   |||||||||| ||||||||||||    
T  52298116 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcactattctgcttacgtggcagtgcagacacatcaaaagtttacgtgaacg 52298215  T
Q  331 gaccaaaatgcccctaag 348  Q
    ||||||||||||||||||    
T  52298216 gaccaaaatgcccctaag 52298233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 362
Target Start/End: Complemental strand, 8439643 - 8439431
Alignment:
Q  150 tatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaatt 248  Q
    ||||||||||||||| ||||||||||||  | ||||||||| || | |||||||||||| || |||||||| ||||  |||  |||||||||||| | ||    
T  8439643 tatgtgtttcgtcct-gtaattaagggttgtttaaaaattgatcattgtaatcgttaatcctagcaaattatccttgcaaacattaatcatttaaaattt 8439545  T
Q  249 ggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaactttacgtgaacggaccaaaatgcccctaag 348  Q
     ||  ||  ||| | |||||||| ||||||||| ||||||| | ||||| ||||| |  | |||||||| ||||||||||| |||| |||||||||||||    
T  8439544 cgtcccttgacccacttaatcaccgccacgtcagtaatttgatgacgtgacagtgttgacccatcaaaagtttacgtgaacagaccgaaatgcccctaag 8439445  T
Q  349 gttctcagacatac 362  Q
    ||||| | ||||||    
T  8439444 gttctaacacatac 8439431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 142 - 303
Target Start/End: Original strand, 55866111 - 55866271
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcattt 241  Q
    ||||| ||||||| |||||||| || ||||| ||||| | |||||||||||  |||| ||  |||| || |||||||||||| | ||| | |||||||||    
T  55866111 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtt-tgtattcactaatccttgcaaattaccctctcaaagtataatcattt 55866209  T
Q  242 aagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtg 303  Q
    || |||||||  || |||| ||||||| |||||||||||||| |||||||||||||||||||    
T  55866210 aaaaattggtccctgaacccagttaataactgccacgtcactgatttgcttacgtggcagtg 55866271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 10203630 - 10203723
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    ||||||||||||| | |||||||||||||| |||||||| ||| |||||||||||||||||| ||||||| |||| |||| |||||||||||||    
T  10203630 atgtgtttcgtccctataattaagggtcatttaaaaattagtcactgtaatcgttaattctgacaaattatccttataaaatttaatcatttaa 10203723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 32063774 - 32063662
Alignment:
Q  132 aaatgaaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaat 230  Q
    ||||| || |||||||||||||| ||| |||| || ||||| ||||||| |||||||||||  |||||||||||||| ||||||||||||||||  |||     
T  32063774 aaatggaaaaggctttaatatgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaag 32063675  T
Q  231 tttaatcatttaa 243  Q
    |||||||||||||    
T  32063674 tttaatcatttaa 32063662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 289
Target Start/End: Original strand, 41582444 - 41582595
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    ||||||||||||||||||||| ||| || ||| | ||||||| ||||||||||| ||| ||||||||||| |||||||||| ||| |  |||  ||||||    
T  41582444 ataggctttaatatgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatc 41582543  T
Q  238 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    |||||| | || ||  |||| |  ||||||||| ||||||||||||||||||    
T  41582544 atttaaaatttcgtccctcatcacagttaatcattgccacgtcactaatttg 41582595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 39667193 - 39667119
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||| |||||||||||    
T  39667193 atgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattaccctt 39667119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 293
Target Start/End: Original strand, 29320029 - 29320183
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||||||||| ||||| |||| || ||||   ||| || ||||||||||||| ||||||| ||||| ||  ||||||||||||| ||| ||||||||||    
T  29320029 ggctttaatatatgtttggtccctgcaatttgaggttatttaaaaattggtccctgtaatccttaatcctaacaaattaccctttcaaagtttaatcatt 29320128  T
Q  241 taagaattggt--ttctcaacctagttaatcactgccacgtcactaatttgctta 293  Q
    | |||||||||   |||||||| ||||||||| || ||||||||| ||| |||||    
T  29320129 ttagaattggtccctctcaacccagttaatcagtgtcacgtcactgattagctta 29320183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 30641515 - 30641620
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaat 236  Q
    |||| |||||||||||||||||||||| |  ||||| ||||||| |||||||| || |||||||||||||| || |||||||||| ||  ||| ||||||    
T  30641515 aaattggctttaatatgtgtttcgtccctccaattaggggtcatttaaaaatttgt-ctgtaatcgttaatccttgcaaattaccattacaaagtttaat 30641613  T
Q  237 catttaa 243  Q
    |||||||    
T  30641614 catttaa 30641620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 32062589 - 32062691
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||||||||||||||| |||| || ||||| ||||||| ||||||||||||| ||||| | ||||| ||| ||||||| |||| |||| ||||||||||    
T  32062589 ggctttaatatgtgtttggtccctgaaattaggggtcatttaaaaattggtccttgtaaacattaatcctgacaaattagccttgtaaaatttaatcatt 32062688  T
Q  241 taa 243  Q
    |||    
T  32062689 taa 32062691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 11446269 - 11446372
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||| |||||||||||||||||| || |||||  |||||| |||||||||| || || |||||||||| ||||||||||||||||  ||| ||||||| |    
T  11446269 aggcattaatatgtgtttcgtccctgcaattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattacccttgcaaagtttaatctt 11446368  T
Q  240 ttaa 243  Q
    ||||    
T  11446369 ttaa 11446372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 40317092 - 40316989
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||||||||||||||||||| || | ||| || | || |||||||||| | |||||||||||||| |||| |||||||||||| ||| ||||||| |    
T  40317092 aggctttaatatgtgtttcgtccctgcagttagggcttatttaaaaattggcctctgtaatcgttaatcctggaaaattaccctttcaaagtttaatcct 40316993  T
Q  240 ttaa 243  Q
    ||||    
T  40316992 ttaa 40316989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 40327166 - 40327063
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||||||||||||||||||| || | ||| || | || |||||||||| | |||||||||||||| |||| |||||||||||| ||| ||||||| |    
T  40327166 aggctttaatatgtgtttcgtccctgcagttagggcttatttaaaaattggcctctgtaatcgttaatcctggaaaattaccctttcaaagtttaatcct 40327067  T
Q  240 ttaa 243  Q
    ||||    
T  40327066 ttaa 40327063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 289
Target Start/End: Complemental strand, 30642575 - 30642426
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||||||||||||||||||| || ||||| ||||||| ||||||||  ||  ||||||||||||| || ||||||||  |||  ||| |||||||||    
T  30642575 aggctttaatatgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatcat 30642476  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    |||| | || ||  ||  ||| | ||||| |||||||||||| |||||||    
T  30642475 ttaaaatttcgtcccttgacccacttaatgactgccacgtcattaatttg 30642426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 39539348 - 39539263
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||| ||||||| |||| |||||| ||||||||||| | ||||||||||||  |||||||||||||||| |||||||| ||||    
T  39539348 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagcctt 39539263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 289
Target Start/End: Complemental strand, 40388535 - 40388386
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||||||||||||||| ||| || ||||||||| ||| ||||||||||| ||| |||||| |||| |||||||||| |||    |||  ||||||||    
T  40388535 aggctttaatatgtgtttcatccctgcaattaagggccatttaaaaattggtccctctaatcgctaatcctggcaaattgccccaacaaaagttaatcat 40388436  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    |||| | || ||  || | |  ||||||||| ||||||||||||||||||    
T  40388435 ttaaaatttcgtccctgatcacagttaatcattgccacgtcactaatttg 40388386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 14801735 - 14801895
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||| |||||| ||||| | ||| | |||||||||||| | ||||||| |||| ||| ||| |||||||| ||   |||||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcat 14801834  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||| | || ||  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  14801835 ttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggca 14801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 8438307 - 8438382
Alignment:
Q  168 aattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    ||||| ||||||| |||||||||||| ||||||||||||| |||||||||||| |||  |||  ||||||||||||    
T  8438307 aattaggggtcatttaaaaattggtcatgtaatcgttaatcctggcaaattactcttgcaaaccttaatcatttaa 8438382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 283
Target Start/End: Original strand, 7280209 - 7280351
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    |||||| |||| ||||| |||||||||| || ||||||| |||||| ||||| ||||| || ||||| ||| ||  || |||| | ||| |||||||| |    
T  7280209 ggcttttatatatgtttagtccttgtaaataggggtcatttaaaaaatggtctctgtattctttaatcctgtcattttgccctgtcaaaatttaatcact 7280308  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcact 283  Q
    ||| ||||||||||||| || ||||||| | || |||||||||    
T  7280309 taaaaattggtttctcagccaagttaataaatgtcacgtcact 7280351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 141 - 282
Target Start/End: Original strand, 40387466 - 40387608
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||||||||||||||| ||| || ||||| ||| ||| ||||||||||| |||||| ||| |||| |||||||||| ||| |  |||  ||||||||    
T  40387466 aggctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcat 40387565  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcac 282  Q
    |||| | || ||| |||  |  | |||||||||||||||||||    
T  40387566 ttaaaatttcgttcctcttctcacttaatcactgccacgtcac 40387608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 50504242 - 50504168
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||||||||| | ||||| |||||||| ||| |||||||||||||| | ||||| ||||||||    
T  50504242 atgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttaccctt 50504168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 54858977 - 54858903
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| ||||||||||||| ||||||| ||||||||    
T  54858977 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttaccctt 54858903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 11448158 - 11448074
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||| ||||||| |||||||| |||||||| ||||| | ||||||||| || ||||||||| |||| || |||||||||||||    
T  11448158 aggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattaccctt 11448074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 300
Target Start/End: Original strand, 16605597 - 16605761
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaa 235  Q
    |||||||||| |  |||||||||||||||| ||||| | ||||| |||||||| || ||||||||||| ||  ||| ||| ||||||||  |    ||||    
T  16605597 aaataggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaa 16605696  T
Q  236 tcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||| | || ||  |||  || | |||||||||||||||||||||||| ||| ||||||||    
T  16605697 tcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtggca 16605761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 7451832 - 7451915
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 222  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| ||||||||||||||| ||||||| ||||||    
T  7451832 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttaccc 7451915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 452
Target Start/End: Complemental strand, 8439413 - 8439366
Alignment:
Q  405 catcttcaaaacccagcacaacaaccactaccatctcctccatcctca 452  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  8439413 catcttcaaaacccagcaccacaaccaccaccatctccttcatcctca 8439366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 43155929 - 43155850
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaa 215  Q
    |||||||||| ||||||| |||  ||||| |||||| ||||| | ||||||||||| ||||||||||||||| |||||||    
T  43155929 aaataggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaa 43155850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 289
Target Start/End: Original strand, 50418665 - 50418816
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    |||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| ||||||||||||||| || ||||| || ||||  ||   ||||||    
T  50418665 ataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatc 50418764  T
Q  238 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    |||||| | || ||   |  ||| | ||||||||||||||||||||||||||    
T  50418765 atttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttg 50418816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 3032591 - 3032665
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||| ||||||| ||||||||    
T  3032591 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttaccctt 3032665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 5818192 - 5818118
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||| ||||||||| | ||||| |||||||| || ||||||||||||||| ||| ||| ||||||||    
T  5818192 atgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttaccctt 5818118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 11523958 - 11524032
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| |||||||||||||| |||||||  |||||||    
T  11523958 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatataccctt 11524032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 41583663 - 41583557
Alignment:
Q  138 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattg-gtcctgtaatcgttaattctggcaaattacccttttaaattttaat 236  Q
    |||||||||||||||||||||| ||| || ||||| ||||||| |||||||||  | ||||| ||| |||| |||||||||| ||| |  |||  |||||    
T  41583663 aataggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaattgcccctgcaaaagttaat 41583564  T
Q  237 catttaa 243  Q
    |||||||    
T  41583563 catttaa 41583557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 45463082 - 45463156
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||| ||||||| ||||||||    
T  45463082 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttaccctt 45463156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 10408305 - 10408232
Alignment:
Q  152 tgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  10408305 tgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 10408232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 300
Target Start/End: Complemental strand, 54087117 - 54086964
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    ||||||| |||| || ||||||||| ||||| | ||||||||||| |||||||||||||||  || ||| ||||||||  |   ||||||||||||| |     
T  54087117 aatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcatttaaaat 54087018  T
Q  247 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    || || ||||  || | |||||||||  || |||||||||||| | ||||||||    
T  54087017 ttcgtctctctccccacttaatcactaacatgtcactaatttgatgacgtggca 54086964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 300
Target Start/End: Complemental strand, 15508094 - 15507942
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaat 247  Q
    ||||||| |||| |||||| ||||| ||||| | |||||||||  | |||||||| |||| ||| ||| ||||| ||  |   ||||||||||||| | |    
T  15508094 aatatgtatttcatccttgcaattaggggtcgtttaaaaattgtccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcatttaaaatt 15507995  T
Q  248 tggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    | || ||||  || | |||||||||||| ||||||||||||| | ||||||||    
T  15507994 tcgtctctctccccacttaatcactgccgcgtcactaatttgatgacgtggca 15507942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 56014778 - 56014890
Alignment:
Q  194 ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgctta 293  Q
    ||||||||| |||| |||||||||| ||| |  |||  |||||||||||| | || ||  |||| |  |||||||||||||||||||||| ||||| | |    
T  56014778 ctgtaatcgctaatcctggcaaattgcccctgcaaacgttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcactgatttgatga 56014877  T
Q  294 cgtggcagtgcta 306  Q
    ||||||| |||||    
T  56014878 cgtggcactgcta 56014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 286
Target Start/End: Original strand, 24349672 - 24349819
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| |||| ||| |||| || ||||| || ||||  ||   |||||||    
T  24349672 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 24349771  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaat 286  Q
    ||||| | || ||  |||  || |||||||||||||||||||||||||    
T  24349772 tttaaaatttcgtccctctccccagttaatcactgccacgtcactaat 24349819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 281
Target Start/End: Complemental strand, 55867545 - 55867402
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    |||||||| ||||||| |||  ||| || ||||| ||||| | ||||||||||||| ||||||||||||| || ||||| |||||||  |   |||||||    
T  55867545 ataggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatc 55867446  T
Q  238 atttaagaattggtttctcaacctagttaatcactgccacgtca 281  Q
    |||||| | || ||  ||   || ||||||||||||||||||||    
T  55867445 atttaaaatttcgtccctattcccagttaatcactgccacgtca 55867402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 27068919 - 27068993
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  27068919 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 27068993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 27069327 - 27069253
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||| | |||| ||||||| ||||||||    
T  27069327 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttaccctt 27069253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 54858569 - 54858643
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||| ||| ||||||||    
T  54858569 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttaccctt 54858643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 24711110 - 24711191
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacc 221  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| |||||    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacc 24711191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 300
Target Start/End: Complemental strand, 35508670 - 35508509
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| |||  || ||| ||||| ||||| | ||||||||  |||| |||||||||||||||  ||| ||||||||  |   ||||||||    
T  35508670 taggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatca 35508571  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||||| | || || ||||  || | ||||||||||||| |||| ||||||| | ||||||||    
T  35508570 tttaaaatttcgtatctctccccacttaatcactgccatgtcattaatttgatgacgtggca 35508509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 7452108 - 7452072
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  7452108 ttaatcactgccacgtcactaatttgatgacgtggca 7452072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 9144889 - 9144925
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  9144889 ttaatcactgccacgtcactaatttgatgacgtggca 9144925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 16006112 - 16006076
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  16006112 ttaatcactgccacgtcactaatttgatgacgtggca 16006076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 17356048 - 17356084
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  17356048 ttaatcactgccacgtcactaatttgatgacgtggca 17356084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 33247396 - 33247432
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  33247396 ttaatcactgccacgtcactaatttgatgacgtggca 33247432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 34837197 - 34837233
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  34837197 ttaatcactgccacgtcactaatttgatgacgtggca 34837233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 35028303 - 35028267
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  35028303 ttaatcactgccacgtcactaatttgatgacgtggca 35028267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 36009244 - 36009160
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaaggg-tcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccc 222  Q
    ||||||| ||||||| |||  |||||||||||| ||| || | ||||||||||||| ||||||||||||| |||| || ||||||    
T  36009244 taggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgttaatcctggaaatttaccc 36009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 42738154 - 42738190
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  42738154 ttaatcactgccacgtcactaatttgatgacgtggca 42738190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 44967192 - 44967228
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  44967192 ttaatcactgccacgtcactaatttgatgacgtggca 44967228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 46661219 - 46661183
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  46661219 ttaatcactgccacgtcactaatttgatgacgtggca 46661183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 52909686 - 52909630
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 193  Q
    |||||||||| ||||||| |||| |||||| ||||| || |||| ||||||||||||    
T  52909686 aaataggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtc 52909630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 243; Significance: 1e-134; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 141 - 482
Target Start/End: Complemental strand, 40150243 - 40149901
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||||||||||||||||||||||| ||||| ||||||| | ||||||||||| ||||||||||||| || | |||||||||||| ||| |||||||||    
T  40150243 aggctttaatatgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcctagaaaattaccctttcaaagtttaatcat 40150144  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaactttacgtgaacggaccaaaat 339  Q
    ||||||||||||  ||||||||| |||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  40150143 ttaagaattggtccctcaacctaattaatcactgccacatcactaatttacttacgttgcagtgctaacacatcaaaactttacgtgaacggaccaaaat 40150044  T
Q  340 gcccctaaggttctcagacatacgtgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccagcacaacaaccactaccatc 439  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  40150043 gcccctaaggctctcagacatactcgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccagcgcaacaaccaccaccatc 40149944  T
Q  440 tcctccatcctcaaaaccagcagcatctttttcagtgtgttca 482  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  40149943 tcctccatcctcaacaccagcagcatctttttcaatgtgttca 40149901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 293
Target Start/End: Original strand, 40148897 - 40149050
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||||||||||||||||||| || |||||  | |||| ||||||||||||| ||||||||||||| || |||||||||||||| ||| |||||||||    
T  40148897 aggctttaatatgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctttcaaagtttaatcat 40148996  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgctta 293  Q
    ||||||||||||  |||| || ||||||||| || ||||| ||| ||| |||||    
T  40148997 ttaagaattggtccctcatcccagttaatcagtgtcacgtgactgattagctta 40149050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 24141451 - 24141554
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||||||||||||||||||| || |||||   ||||| ||||||||||||| ||||||||||||| ||||||||||| ||||  ||| |||||||||    
T  24141451 aggctttaatatgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcat 24141550  T
Q  240 ttaa 243  Q
    ||||    
T  24141551 ttaa 24141554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 289
Target Start/End: Original strand, 5993887 - 5994037
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| |||||||||||| ||||||||  |   ||||||||    
T  5993887 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatca 5993986  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    ||||| | || ||  |||  || | ||||||||||||| ||||||||||||    
T  5993987 tttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttg 5994037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 30096970 - 30096829
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| |||| || |||| ||| |||||||| ||||||| |||||| |||||| ||||  | ||||||||||||| |||||||  ||||  ||||||| |    
T  30096970 ggcttaaatacgtatttcatccctgtaattaggggtcatttaaaaaatggtccctgtatccattaattctggcaatttaccctcctaaaaattaatcact 30096871  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcac 282  Q
    ||| |||||||  ||||||||||||||||| |||||| ||||    
T  30096870 taaaaattggtccctcaacctagttaatcagtgccacatcac 30096829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 35512154 - 35512296
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    ||||||| |||| |||||| ||||||||||| | ||||||||||| |||||||||| |||| ||||||| ||||||||  |   ||||||||||||| |     
T  35512154 aatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaat 35512253  T
Q  247 ttggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    || ||  |||  || | |||||||||||||| |||||||||||    
T  35512254 ttcgtccctctccccacttaatcactgccacatcactaatttg 35512296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 287
Target Start/End: Original strand, 20840531 - 20840679
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| ||||||||||||||| || |||| ||||||||  |   |||||| |    
T  20840531 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatga 20840630  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatt 287  Q
    ||||| | || ||  |||  || | ||||||||||||||||||||||||    
T  20840631 tttaaaattttgtccctctccccacttaatcactgccacgtcactaatt 20840679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 281
Target Start/End: Original strand, 8875458 - 8875589
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 249  Q
    |||||||||||||||| ||||||| ||||| |||||||| || ||||||||||||||| ||||||| |||| |||  |   ||||||||||||| | ||     
T  8875458 atgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatttaaaatttc 8875557  T
Q  250 gtttctcaacctagttaatcactgccacgtca 281  Q
    |||  |  ||| | ||||||||||||||||||    
T  8875558 gttctttgaccaacttaatcactgccacgtca 8875589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 17544478 - 17544391
Alignment:
Q  138 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||| |  |||||||||||||||| ||||| | ||||| |||||||| || ||||||||||||||| ||||||| ||||||||    
T  17544478 aataggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttaccctt 17544391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 289
Target Start/End: Complemental strand, 20814566 - 20814415
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    |||||||| ||||||| |||| |||||| ||||| ||||| | |||||||||||| ||||||||| |||| || |||| |||| |||  |   |||||||    
T  20814566 ataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatc 20814467  T
Q  238 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    |||||| | || ||  |||  |||| ||||||||||||| ||||||||||||    
T  20814466 atttaaaattttgtccctctccctacttaatcactgccatgtcactaatttg 20814415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 33871348 - 33871422
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||| ||||||| ||||||| ||||| |||||||| |||| |||||||| |||||||||||| ||||||||    
T  33871348 atgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttaccctt 33871422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 300
Target Start/End: Original strand, 39453297 - 39453459
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    |||| ||| ||||||| |||| |||||| ||||| ||||| | |||||||||||| ||||||||| |||| ||||||| ||||||||  |   |||||||    
T  39453297 atagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatc 39453396  T
Q  238 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||| | || ||  |||  || | |||||||||| || |||||||||||| | ||||||||    
T  39453397 atttaaaatttcgtccctctccccacttaatcactggcatgtcactaatttgatgacgtggca 39453459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 300
Target Start/End: Complemental strand, 42067955 - 42067790
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    ||||||||||||||||||||| ||| || ||||| ||||||| ||||| ||||| |||||||| | |||| |||||||| | ||| |  ||| |||||||    
T  42067955 ataggctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgataatcctggcaaactgcccctgcaaactttaatc 42067856  T
Q  238 atttaagaattggt--ttc-tcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||| | || ||  ||| ||| |  |||||||||||||||||||||| ||| ||| | ||||||    
T  42067855 atttaaaatttcgtccttcatcatcaaagttaatcactgccacgtcactgattagctgatgtggca 42067790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 3529270 - 3529189
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccc 222  Q
    ||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| ||||||||||||| ||||||| ||||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttaccc 3529189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 8875684 - 8875619
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaa 215  Q
    |||||||||||||||| ||||| | ||||| |||||||| || ||||||||||||||| |||||||    
T  8875684 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaa 8875619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 300
Target Start/End: Complemental strand, 13362650 - 13362497
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    ||||||| |||| || ||| ||||| ||||| | |||||||||||||| ||||||| ||||  |||||| ||||||||  |   ||||||||||||| |     
T  13362650 aatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaaaat 13362551  T
Q  247 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    || || ||||  || | ||||||||||| || ||||||||||| | ||||||||    
T  13362550 ttagtctctctccccacttaatcactgctacatcactaatttgatgacgtggca 13362497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 300
Target Start/End: Complemental strand, 14194853 - 14194692
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    |||||||| || |||| |||| |||||||||||| ||||| | |||||||||| | ||||||   |||| ||||||| ||||||||  |   ||||||||    
T  14194853 ataggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattggccatgtaattactaatcctggcaatttacccttgcattgtttaatca 14194754  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||||| | || ||  |||  || | ||||||||||| | |||||||||||| | ||||||||    
T  14194753 tttaaaatttcgtccctctccccacttaatcactgctatgtcactaatttgatgacgtggca 14194692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 289
Target Start/End: Complemental strand, 16157284 - 16157135
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| ||| ||||||||||| ||| ||| ||||||||  |   |||||||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcat 16157185  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    |||| | || ||  |||  || | |||||| |||||| ||||||||||||    
T  16157184 ttaaaattttgtccctctccccacttaatccctgccatgtcactaatttg 16157135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 300
Target Start/End: Complemental strand, 19892730 - 19892577
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    ||||||| |||| |||||| |||||  |||| | |||||||||||| |||||||||||||| ||  ||| ||||||||  |   ||||||||||||| |     
T  19892730 aatatgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcatttaaaat 19892631  T
Q  247 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    || ||   ||  || | |||||||||||||||||||||||||| | ||||||||    
T  19892630 ttcgtcattctccccacttaatcactgccacgtcactaatttgatgacgtggca 19892577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 38475429 - 38475344
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||| ||||||  |||| |||||| ||||| ||||| | ||||||||||||| ||||||||||||| ||| ||| ||||||||    
T  38475429 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttaccctt 38475344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 300
Target Start/End: Complemental strand, 32242670 - 32242511
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    |||||| ||||||| |||| |||||| ||||| ||||  | |||||||| |||||||| ||| |||| || ||||| || ||||  ||   |||||||||    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 32242571  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||| | || ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  32242570 taaaattttgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggca 32242511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 289
Target Start/End: Complemental strand, 5024440 - 5024298
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    ||||||| |||| |||||| ||||| ||||| | |||||||||||| | ||||||| |||| ||| ||| ||||| ||  |   ||||||||||||| |     
T  5024440 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaaaat 5024341  T
Q  247 ttggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    || ||| |||  || | |||||||||||||| |||||||||||    
T  5024340 ttcgttcctctccccacttaatcactgccacatcactaatttg 5024298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 11761748 - 11761830
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 222  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccc 11761830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 20152790 - 20152864
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||||||| || ||||||| ||||| |||||||| ||| ||||||||| |||| |||| || ||||||||    
T  20152790 atgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttaccctt 20152864  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 28771266 - 28771164
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||  |||||||||||| ||||| | ||||||||||||| |||||||| ||||  |||||| |||||| | ||   ||||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcatt 28771167  T
Q  241 taa 243  Q
    |||    
T  28771166 taa 28771164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 281
Target Start/End: Original strand, 42063288 - 42063394
Alignment:
Q  176 gtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattggtttctcaacctagttaatcactgc 274  Q
    ||||| |||||||||||| ||||||||| |||| |||||||||| ||| |  |||| |||||||||||| | || ||  |||| |  || ||||||||||    
T  42063288 gtcatttaaaaattggtctctgtaatcgctaatcctggcaaattgcccctgcaaatgttaatcatttaaaattttgtccctcatcacaggtaatcactgc 42063387  T
Q  275 cacgtca 281  Q
    |||||||    
T  42063388 cacgtca 42063394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 300
Target Start/End: Original strand, 19892314 - 19892467
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    ||||||| |||| |||||| ||||| ||||| | ||||||||||||| |||| |||||||| || ||||| || |||| |||   |||||||||||| |     
T  19892314 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcatttaaaat 19892413  T
Q  247 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    || ||   |  | | | |||||||||||||||| ||||||||| | ||||||||    
T  19892414 ttcgtcctttgatcaacttaatcactgccacgtaactaatttgatgacgtggca 19892467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 27587148 - 27587229
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 222  Q
    ||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||    
T  27587148 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccc 27587229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 39453728 - 39453675
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc 194  Q
    |||||| ||||||| |||| |||||| ||||| ||||||| |||||||||||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcc 39453675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 1506241 - 1506205
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  1506241 ttaatcactgccacgtcactaatttgatgacgtggca 1506205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 5024142 - 5024178
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  5024142 ttaatcactgccacgtcactaatttgatgacgtggca 5024178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 6301848 - 6301812
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  6301848 ttaatcactgccacgtcactaatttgatgacgtggca 6301812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 6757988 - 6758024
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  6757988 ttaatcactgccacgtcactaatttgatgacgtggca 6758024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 11047437 - 11047596
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtca-tctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| ||||  ||||| ||||| | |||| | ||||||||| ||| ||||||| ||||  |||||| ||||||||  |   |||||||||    
T  11047437 aggcttaaatatgtatttcacccttgcaattaggagtcagtttaaaaattg-tcccgtaatcgctaatcttggcaatttacccttgcattgtttaatcat 11047535  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||| | || || ||||  || | ||||||||||||| |||||||||||| | ||||||||    
T  11047536 ttaaaatttcgtctctctccccacttaatcactgccatgtcactaatttgatgacgtggca 11047596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 14849135 - 14848975
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    |||||| |||||||||| |||||| ||| || || |||| |||||| |||||| |||| || |||||  |||||  || ||||   ||| ||||||||||    
T  14849135 ggcttttatatgtgtttagtccttctaaatagggatcatttaaaaaatggtccatgtattccttaatcgtggcattttgccctaccaaaatttaatcatt 14849036  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcacta-atttgcttacgtggca 300  Q
    ||| | |||||  |||| || | |||||||||||||| |||||| ||| ||| ||||||||    
T  14849035 taaaatttggtccctcaccccacttaatcactgccacatcactagattagctgacgtggca 14848975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 24547554 - 24547470
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| | |||||| |||| ||||||| ||||||||    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttaccctt 24547470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 28770992 - 28771028
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  28770992 ttaatcactgccacgtcactaatttgatgacgtggca 28771028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 31482525 - 31482561
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  31482525 ttaatcactgccacgtcactaatttgatgacgtggca 31482561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 38475156 - 38475192
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  38475156 ttaatcactgccacgtcactaatttgatgacgtggca 38475192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 156 - 480
Target Start/End: Original strand, 9337040 - 9337365
Alignment:
Q  156 tttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattggtttc 254  Q
    ||||||| ||| |||||  |||||| | |||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||  |    
T  9337040 tttcgtctttgcaattagaggtcattttaaaattggtccttgtaatcgttaattttggcaaattaccctttcaaagtttaatcatttaagaattggtccc 9337139  T
Q  255 tcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaactttacgtgaacggaccaaaatgcccctaaggttctc 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9337140 tcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctaacacatcaaaactttacgtgaacggaccaaaatgcccctaaggttctc 9337239  T
Q  355 agacatacgtgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccagcacaacaaccactaccatctcctccatcctcaaa 454  Q
    ||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||     
T  9337240 agacaaactcgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccagcgcaacaactaccaccatctcctccatcctcaac 9337339  T
Q  455 accagcagcatctttttcagtgtgtt 480  Q
    ||||||||||||||||||||||||||    
T  9337340 accagcagcatctttttcagtgtgtt 9337365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 321 - 425
Target Start/End: Original strand, 19381898 - 19382002
Alignment:
Q  321 tacgtgaacggaccaaaatgcccctaaggttctcagacatacgtgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccag 420  Q
    |||||||| |||||||| ||||| | ||| ||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||||||||     
T  19381898 tacgtgaatggaccaaagtgcccatgaggatctcagacatatgcgtaatgaccgttttaccccttagttcatcttctccctcttcatcttcaaaacccat 19381997  T
Q  421 cacaa 425  Q
    |||||    
T  19381998 cacaa 19382002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 2535978 - 2535876
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||||||||||| |||||||| || ||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||  ||| ||||||||||    
T  2535978 ggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatt 2535879  T
Q  241 taa 243  Q
    |||    
T  2535878 taa 2535876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 197 - 362
Target Start/End: Complemental strand, 8747636 - 8747471
Alignment:
Q  197 taatcgttaattctggcaaattacccttttaaattttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgt 296  Q
    ||||||||||| |||  |||||||||||  |||  |||||||||||| | || ||  || |||| | |||||||| ||||||||| ||||||| | ||||    
T  8747636 taatcgttaatcctgaaaaattacccttgcaaacattaatcatttaaaatttcgtcccttaacccacttaatcaccgccacgtcagtaatttgatgacgt 8747537  T
Q  297 ggcagtgctatcacatcaaaactttacgtgaacggaccaaaatgcccctaaggttctcagacatac 362  Q
    ||||||| |  | |||||||| ||||||||||| |||| |||||||||||||||||| | ||||||    
T  8747536 ggcagtgttgacccatcaaaagtttacgtgaacagaccgaaatgcccctaaggttctaacacatac 8747471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 10749937 - 10749853
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||||||||||||| ||||| || |||| ||||||||||||| ||||||||||||| ||| ||||||||||||    
T  10749937 aggctttaatatgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcctgtcaaattaccctt 10749853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 4995085 - 4995002
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||| ||||||| |||| |||||| ||||| ||||||| ||||||||||||||||||||| |||| ||| ||| ||||||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcctgtaatcgctaatcctgacaatttaccctt 4995002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 16388954 - 16388795
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| |||||| ||||| ||||||| |||||||||| || |||||| | |||| ||||||| ||||||||  |   ||||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 16388855  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||| | || ||  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  16388854 taaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggca 16388795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 7983423 - 7983511
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||| | ||||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  7983423 aaataggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 7983511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 11763103 - 11763027
Alignment:
Q  143 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaatt 218  Q
    ||||||||||||||||||||| || |||||||| |||| ||||||||||||| |||||||| |||| ||| ||||||    
T  11763103 gctttaatatgtgtttcgtccctgcaattaaggatcatttaaaaattggtccttgtaatcgctaatcctgacaaatt 11763027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 25124980 - 25124906
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||||||||||| ||||||||    
T  25124980 atgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttaccctt 25124906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 23698674 - 23698589
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||| ||||||| |||  |||||||||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||||    
T  23698674 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccctt 23698589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 289
Target Start/End: Complemental strand, 4406088 - 4405940
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| |||||||||||| ||||  | ||||||||||||| |||| | |||||| || |||| ||||||||  ||  ||||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatt 4405989  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    ||| | || ||  |||  || | |||||||||| |||||||||||||||    
T  4405988 taaaatttcgtccctcttcccacttaatcactgtcacgtcactaatttg 4405940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 288
Target Start/End: Original strand, 13186059 - 13186207
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||| |||||| ||||| || || | ||||||||||| | |||||||| |||| ||| ||| ||||||||  |   |||||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 13186158  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaattt 288  Q
    |||| | || || ||||  || | |||||||||||||||||||||||||    
T  13186159 ttaaaatttcgtctctctccccacttaatcactgccacgtcactaattt 13186207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 27500492 - 27500424
Alignment:
Q  154 tgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacc 221  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||| |||  ||||||||    
T  27500492 tgtttcgtccttgcaattatgggtcatttaaaaattggtccatgtaatcgttaatcctgaaaaattacc 27500424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 289
Target Start/End: Original strand, 39071676 - 39071824
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||| ||| ||||||||  |   ||||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 39071775  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    ||| | || ||  |||  || | |||||||||||| |||||||||||||    
T  39071776 taaaatttcgtccctctccccacttaatcactgccgcgtcactaatttg 39071824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 452
Target Start/End: Complemental strand, 8747453 - 8747406
Alignment:
Q  405 catcttcaaaacccagcacaacaaccactaccatctcctccatcctca 452  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  8747453 catcttcaaaacccagcaccacaaccaccaccatctccttcatcctca 8747406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 10445752 - 10445621
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 249  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||  |   ||||||||||||| | ||     
T  10445752 atgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10445653  T
Q  250 gtttctcaacctagttaatcactgccacgtca 281  Q
    || | |  ||| | ||||||||||||||||||    
T  10445652 gtcttttgaccaacttaatcactgccacgtca 10445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 44664516 - 44664591
Alignment:
Q  150 tatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||||||||||| ||||| | ||||| |||||||| || ||||||||||||||| ||||||| ||| ||||    
T  44664516 tatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaacctt 44664591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 8746332 - 8746426
Alignment:
Q  150 tatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    |||||||||| ||| || ||||| ||||||| ||||||| |||| ||||||||||||||  || ||||||||||||  |||  ||||||||||||    
T  8746332 tatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatcgtgacaaattacccttgcaaaccttaatcatttaa 8746426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 300
Target Start/End: Complemental strand, 11675082 - 11674932
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 249  Q
    ||||| || ||||||| ||||| | ||||| |||||||| |||| |||||| | |||| ||||||| ||| ||||  || | |||||||||||| | |||    
T  11675082 atgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttg 11674983  T
Q  250 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  11674982 gtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggca 11674932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 35634516 - 35634442
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||||| ||||| |||||||| || |||||||||| |||| ||| ||| ||||||||    
T  35634516 atgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttaccctt 35634442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 23663944 - 23663859
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | |||||||||||| ||||||||| |||| ||||||| ||||||||    
T  23663944 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttaccctt 23663859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 8317017 - 8316933
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| |||||||| |||| ||||||| ||||||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttaccctt 8316933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 234157 - 234083
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||| |||||| ||||||| ||||||||    
T  234157 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttaccctt 234083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 710568 - 710494
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||| |||||| ||||||| ||||||||    
T  710568 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttaccctt 710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 747780 - 747706
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||| |||||| ||||||| ||||||||    
T  747780 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttaccctt 747706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 871675 - 871601
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||| |||||| ||||||| ||||||||    
T  871675 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttaccctt 871601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 300
Target Start/End: Complemental strand, 13186366 - 13186328
Alignment:
Q  262 agttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  13186366 agttaatcactgccacgtcactaatttgatgacgtggca 13186328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 300
Target Start/End: Complemental strand, 31873326 - 31873168
Alignment:
Q  143 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaat-cgttaattctggcaaattacccttttaaattttaatcattt 241  Q
    ||||| |||||||||| |||| || || || ||||||| |||||| ||||||| | || |||||||  |||||| || ||||   ||| |||||||||||    
T  31873326 gcttttatatgtgtttagtccctgcaaatatgggtcatttaaaaaatggtccttttattcgttaatcttggcaatttgccctcccaaaatttaatcattt 31873227  T
Q  242 aagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    || | || ||| |||  || | ||||||||||| || ||||||||||| | ||||||||    
T  31873226 aaaattttgttcctcttcccacttaatcactgctacatcactaatttgatgacgtggca 31873168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 44664925 - 44664851
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||| ||| ||| ||||||||    
T  44664925 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttaccctt 44664851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 1425430 - 1425369
Alignment:
Q  161 tccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccc 222  Q
    ||||||||||||  |||| | ||||||||||||||||||||  |||| ||||||| ||||||    
T  1425430 tccttgtaattagaggtcgtttaaaaattggtcctgtaatcactaatcctggcaatttaccc 1425369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 23663543 - 23663704
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||  |||| |||||| ||||| ||||| | ||||||||||||| |||| |||||||| || | ||| || ||||  ||   |||||||    
T  23663543 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatcattaatca 23663642  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||||| | || ||   |  ||| | |||||||||||||||||||||||||| || |||||||    
T  23663643 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatttcgtggca 23663704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 3041579 - 3041615
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  3041579 ttaatcactgccacgtcactaatttgatgacgtggca 3041615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 36928781 - 36928745
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  36928781 ttaatcactgccacgtcactaatttgatgacgtggca 36928745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 38845422 - 38845458
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  38845422 ttaatcactgccacgtcactaatttgatgacgtggca 38845458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 40775773 - 40775809
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  40775773 ttaatcactgccacgtcactaatttgatgacgtggca 40775809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 44406980 - 44407016
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  44406980 ttaatcactgccacgtcactaatttgatgacgtggca 44407016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 146 - 452
Target Start/End: Complemental strand, 22828242 - 22827927
Alignment:
Q  146 ttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatttaag 244  Q
    |||| ||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||  || |||||||||| |  |||  ||||||||||||     
T  22828242 ttaaaatgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcgttaatcttgacaaattacccctgcaaaccttaatcatttaaa 22828143  T
Q  245 aattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaactttacgtgaacggaccaaaatgcccc 344  Q
    | ||  |  || |||| | |||||||| |||| || | ||||||| | ||||||||||| |  | |||||||| |||| |||||| |||| |||||||||    
T  22828142 atttcatcacttaacccacttaatcaccgccatgttagtaatttgatgacgtggcagtgttgacccatcaaaagtttaggtgaacagaccgaaatgcccc 22828043  T
Q  345 taaggttctcagacatacgt------gtaatgaccgttttacccctaagttcatct--tctccatcttcatcttcaaaacccagcacaacaaccactacc 436  Q
    ||||||||| | ||||||        ||||| || ||||||||| |||||||||||  ||||| ||||||||||||||||||||||| |||||||| |||    
T  22828042 taaggttctaacacatacacttaaacgtaataactgttttacccttaagttcatctcttctccttcttcatcttcaaaacccagcaccacaaccaccacc 22827943  T
Q  437 atctcctccatcctca 452  Q
    ||||||| ||||||||    
T  22827942 atctccttcatcctca 22827927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 140 - 302
Target Start/End: Complemental strand, 5457337 - 5457174
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | |||||||||||||| ||| |||||||| || |||||||||||||| ||  ||||||||    
T  5457337 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatca 5457238  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagt 302  Q
    ||||| | || ||  |||| || |||||||||||||||||||||| ||| ||| ||||||||||    
T  5457237 tttaaaatttcgtccctcatcccagttaatcactgccacgtcactgattagctgacgtggcagt 5457174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 32687396 - 32687499
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||| ||||| ||||||||||||||| |||||||||| |||||  |||| ||||||||    
T  32687396 aggctttaatatgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatcat 32687495  T
Q  240 ttaa 243  Q
    ||||    
T  32687496 ttaa 32687499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 300
Target Start/End: Complemental strand, 28469441 - 28469277
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaa 235  Q
    |||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| ||||||||||||||| ||||||| ||||||||  |   |||||    
T  28469441 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaa 28469342  T
Q  236 tcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||| | || ||  |||  || | ||||||||| |||||||||||||||| | ||||||||    
T  28469341 tcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtggca 28469277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 10092298 - 10092215
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 222  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||| ||| ||| ||||||||||| ||||||||||||||    
T  10092298 taggctttaatatgtgtttcgtccctgtaattaggggtcatgtaaaaatcggtccctataatcgttaatcctggcaaattaccc 10092215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 32688651 - 32688544
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaa 235  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||| ||||| ||||||| |||||||| |||| ||| |||||| |||||  |||| ||||    
T  32688651 aaataggctttaatatgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaa 32688552  T
Q  236 tcatttaa 243  Q
    ||||||||    
T  32688551 tcatttaa 32688544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 18856082 - 18855980
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    |||||| |||| |||||||||| || ||||| ||||||| ||||||||||||| |||||||||||||  |||||||||||||||  ||| ||||||||||    
T  18856082 ggctttgatatatgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatt 18855983  T
Q  241 taa 243  Q
    |||    
T  18855982 taa 18855980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 18087766 - 18087626
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||||||||||||||| ||||||| ||||| ||||||| |||||||||||| ||||||||| |||| || ||||| || ||||  || | |||||||||    
T  18087766 ggctttaatatgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatt 18087667  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtca 281  Q
    ||| | || ||  || |||| | ||||| ||||||||||||    
T  18087666 taaaattttgtcccttaacccacttaatgactgccacgtca 18087626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 22245530 - 22245597
Alignment:
Q  293 acgtggcagtgctatcacatcaaaactttacgtgaacggaccaaaatgcccctaaggttctcagacat 360  Q
    ||||| |||||||  |||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  22245530 acgtgacagtgctgacacatcaaaagtttacgtgaacgaaccaaaatgcccctaaggttctcacacat 22245597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 138 - 281
Target Start/End: Complemental strand, 17886922 - 17886778
Alignment:
Q  138 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaat 236  Q
    ||||||||| ||||||| |||| |||||| ||||| || |||| ||||||||| ||| |||| |||||||| || ||||| |||||||  |||| |||||    
T  17886922 aataggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaat 17886823  T
Q  237 catttaagaattggtttctcaacctagttaatcactgccacgtca 281  Q
    ||||||| | || ||  ||  ||| | ||||||||||||||||||    
T  17886822 catttaaaatttcgtcccttgacccacttaatcactgccacgtca 17886778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 19204488 - 19204572
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| ||||||||||||||||||||| ||||||||    
T  19204488 aggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttaccctt 19204572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 2640598 - 2640447
Alignment:
Q  150 tatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaatt 248  Q
    ||||| |||| ||||| |||||| ||||| | |||||||||| | ||||||||| |||||||||||| ||||||||  |   ||||||||||||| | ||    
T  2640598 tatgtatttcatccttataattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaattt 2640499  T
Q  249 ggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
     || ||||  || | |||||||||| || |||||||||||| | ||||||||    
T  2640498 cgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtggca 2640447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 303
Target Start/End: Original strand, 43123175 - 43123337
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||||||| || ||||| ||||| | ||||||||||| |||||| ||  |||| || ||||| |||||| | ||| | ||||||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactaccctctcaaagtataatcatt 43123274  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtg 303  Q
    ||| |||| ||  || | || | ||||| |||||||||||||| ||| ||| |||||||||||    
T  43123275 taaaaattagtccctgagcccaattaatgactgccacgtcactgattagctgacgtggcagtg 43123337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 22081569 - 22081642
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||||| |||||| |||| ||||||| ||||||||    
T  22081569 atgtgtttcgtccttgcaattatgcgtcatttaaaaattagtcctctaatcgctaatgctggcaatttaccctt 22081642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 10935794 - 10935953
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||| ||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||||  |   ||||||||||    
T  10935794 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 10935893  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||| | || ||  |||   | | ||||||||||||| |||||||||||| | ||||||||    
T  10935894 taaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtggca 10935953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 6764175 - 6764263
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgt---aattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||| |||||||||||||||| ||    ||||| ||||||| ||||||||||| ||||||||| |||||| || ||||||||||||    
T  6764175 taggcttaaatatgtgtttcgtccctgctgcaattaggggtcatttaaaaattggttcctgtaatcattaattttgacaaattaccctt 6764263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 20567337 - 20567272
Alignment:
Q  231 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtg 297  Q
    |||||||||||||||| ||||  ||||||||||||||||| |||||||||||| ||| ||| |||||    
T  20567337 tttaatcatttaagaactggtc-ctcaacctagttaatcagtgccacgtcactgattagctgacgtg 20567272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 42618328 - 42618254
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaatt-ggtcctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| | ||||||||||| |||| ||||||| ||||||||    
T  42618328 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttaccctt 42618254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 43266275 - 43266349
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| ||||||||||||| ||| ||| ||||||||    
T  43266275 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttaccctt 43266349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 43266683 - 43266609
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||||||| ||| ||||||||    
T  43266683 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttaccctt 43266609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 46205726 - 46205652
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||||| |||| |||||| | |||| |||| |||||| ||||||||||||||| ||| ||||||||||||    
T  46205726 atgtgtttcgttcttgcaattaatgatcatttaaagattggttcctgtaatcgttaatcctgacaaattaccctt 46205652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 13050211 - 13050126
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||||||||||||||||||||| ||||| | || || | ||| || || ||||||||||||||| |||| || ||||||||    
T  13050211 taggctttaatatgtgtttcgtccttgcaattaggcgtaattttaaatttcgtccctgtaatcgttaatcctggtaatttaccctt 13050126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 18086287 - 18086372
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||||||||||||| ||||||| ||||| | ||| | ||||||||||| ||||||| || |||| || |||||||| ||||    
T  18086287 taggctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagcctt 18086372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 6571012 - 6571096
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| ||||||||||||||| ||| ||| ||||||||    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttaccctt 6571096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 289
Target Start/End: Original strand, 42731419 - 42731567
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| | || |||||| ||||| ||||| | ||||||||||||| |||||||| |||| ||||||| |||||| |  |   ||||||||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 42731518  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    ||| | || ||  |||  || | ||||||||||||| ||||||||||||    
T  42731519 taaaatttcgtccctctccccacttaatcactgccatgtcactaatttg 42731567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 13384501 - 13384604
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||||||| ||||||| ||| || |||||||||||   ||||| ||||| |||||||||| |||| || ||||| |||||||  |||  ||||||||    
T  13384501 aggctttaataagtgtttcatccctgcaattaagggtcgcttaaaatttggtccctgtaatcgctaatcctagcaaactacccttgcaaacgttaatcat 13384600  T
Q  240 ttaa 243  Q
    ||||    
T  13384601 ttaa 13384604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 302
Target Start/End: Complemental strand, 18670301 - 18670130
Alignment:
Q  132 aaatgaaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaat 230  Q
    |||| |||| ||||| ||||||| |||  |||||| ||||| ||||| | |||||| |||||| |||| |||||||| || |||| || ||||   |||     
T  18670301 aaataaaattggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaag 18670202  T
Q  231 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagt 302  Q
    |||||||| |||| | |||||  || | || | ||||| |||||||||||||| ||| ||| ||||||||||    
T  18670201 tttaatcacttaaaatttggtccctaagcccatttaattactgccacgtcactgattagctgacgtggcagt 18670130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 42362450 - 42362533
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    ||||| ||||||| |||| |||||| ||||| | ||| | ||||||||||||| |||| |||||||| || |||||||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctt 42362533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 17102019 - 17102101
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 222  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccc 17102101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 25453545 - 25453471
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||| ||||||||||| ||||| |||||||| || |||| ||||| |||| || |||| ||||||||    
T  25453545 atgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttaccctt 25453471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 32068105 - 32068179
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| |||||   ||||| |||||||| |||| |||||||| |||| ||||||| ||||||||    
T  32068105 atgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttaccctt 32068179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 300
Target Start/End: Original strand, 32680604 - 32680754
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 249  Q
    ||||| || ||||||| ||||| | ||||| |||||||| || |||||||| | |||| ||| ||| ||| ||||  || | |||||||||||| | |||    
T  32680604 atgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttgcaattgttaatcatttaaaatttg 32680703  T
Q  250 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  32680704 gtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggca 32680754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 10600035 - 10600100
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaa 215  Q
    |||||||||||||||| ||||| | ||||| |||||||| || ||| ||||||||||| |||||||    
T  10600035 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgttaatcctggcaa 10600100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 270
Target Start/End: Original strand, 20425474 - 20425607
Alignment:
Q  138 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaat 236  Q
    ||||||||| |||||||  ||| ||| || ||||| || |||| |||||||||| || |||||||| ||||  ||||||| |||||| | ||| ||||||    
T  20425474 aataggcttaaatatgtaattcatccctgcaattagggatcatttaaaaattggttcatgtaatcgataatcttggcaaactaccctctcaaaatttaat 20425573  T
Q  237 catttaagaattggtttctcaacctagttaatca 270  Q
    || |||| | || ||  ||||||| |||||||||    
T  20425574 cacttaaaatttcgtccctcaaccaagttaatca 20425607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 23058846 - 23058773
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattaccct 223  Q
    |||||||||||||||| ||||  | ||||| ||||||||  |||| |||||||||||| ||||||| |||||||    
T  23058846 atgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccct 23058773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 280
Target Start/End: Complemental strand, 45011034 - 45010893
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | |||||||||| || |||| ||| |||| || |||| ||||||||  |   ||||||||    
T  45011034 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatca 45010935  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtc 280  Q
    ||||| | || || ||||  || | |||||||||||||||||    
T  45010934 tttaaaatttcgtctctctccccacttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 6253472 - 6253552
Alignment:
Q  143 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 222  Q
    |||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccc 6253552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 17885749 - 17885793
Alignment:
Q  262 agttaatcactgccacgtcactaatttgcttacgtggcagtgcta 306  Q
    |||||||||||||||||||||||||||| | |  |||||||||||    
T  17885749 agttaatcactgccacgtcactaatttgatgagttggcagtgcta 17885793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 18855408 - 18855476
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaat 207  Q
    ||||||||||||||| |||||||| || || || ||||||| |||||| |||| ||| |||||||||||    
T  18855408 taggctttaatatgtttttcgtccctgcaaataggggtcatttaaaaaatggtccctataatcgttaat 18855476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 19204763 - 19204727
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  19204763 ttaatcactgccacgtcactaatttgatgacgtggca 19204727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 22871431 - 22871467
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  22871431 ttaatcactgccacgtcactaatttgatgacgtggca 22871467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 22871706 - 22871622
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||| ||||||| |||  |||||| ||||| ||||||| ||||||||||| |||||||| | |||| || |||| ||||||||    
T  22871706 aggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttaccctt 22871622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 23608808 - 23608860
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc 194  Q
    |||||| |||||||||| ||||||| || || ||||||| |||||||||||||    
T  23608808 ggcttttatatgtgtttagtccttgcaaataggggtcatttaaaaattggtcc 23608860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 27397025 - 27396957
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaat 207  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| ||||    
T  27397025 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaat 27396957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 27992013 - 27991977
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  27992013 ttaatcactgccacgtcactaatttgatgacgtggca 27991977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 29144412 - 29144348
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgtt 204  Q
    ||||||| ||||||| |||||||| || ||||| ||||| | |||||||||||| | ||||||||    
T  29144412 taggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtcatataatcgtt 29144348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 30948283 - 30948319
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  30948283 ttaatcactgccacgtcactaatttgatgacgtggca 30948319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 34928773 - 34928809
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  34928773 ttaatcactgccacgtcactaatttgatgacgtggca 34928809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 39686657 - 39686693
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  39686657 ttaatcactgccacgtcactaatttgatgacgtggca 39686693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 48789180 - 48789148
Alignment:
Q  192 tcctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||||||||||| ||||||||    
T  48789180 tcctgtaatcgttaattctggcaatttaccctt 48789148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 9e-31; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 150 - 293
Target Start/End: Original strand, 33154885 - 33155029
Alignment:
Q  150 tatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaatt 248  Q
    |||||||||||||| || ||||| ||||||| ||||||||||||| ||||||||||||| ||| ||||||| |||| |||| ||||||||||||||||||    
T  33154885 tatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaaattatccttgtaaagtttaatcatttaagaatt 33154984  T
Q  249 ggtttctcaacctagttaatcactgccacgtcactaatttgctta 293  Q
    |||  ||||||| ||||||| | ||||| |||||| ||| |||||    
T  33154985 ggtccctcaacccagttaattagtgccaagtcactgattagctta 33155029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 26718872 - 26718756
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||| |    ||||| |||||||||||||||||||||| |||| |||||||||    
T  26718872 taggctttaatatgtgtttcgtccatgtaattgagggtcatctaaaaattgat----taatcattaattctggcaaattacccttgtaaagtttaatcat 26718777  T
Q  240 ttaagaattggtttctcaacc 260  Q
    |||| |||||||  |||||||    
T  26718776 ttaaaaattggtccctcaacc 26718756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 21186126 - 21186021
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    |||||||||||||||||||| |||| || ||||| ||||||| ||||||||||| | ||||||||||||| ||||||||||||||||  |||  ||||||    
T  21186126 ataggctttaatatgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatc 21186027  T
Q  238 atttaa 243  Q
    ||||||    
T  21186026 atttaa 21186021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 1078535 - 1078638
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||||||||||| |||||||| || ||||| ||||||| ||||||||||| |||||||||||||| ||||| |||||| |||| |||| ||||||||    
T  1078535 taggctttaatatgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaa-tctggtaaattaaccttgtaaagtttaatca 1078633  T
Q  239 tttaa 243  Q
    |||||    
T  1078634 tttaa 1078638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 1079651 - 1079547
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    |||||||||||||||||||| ||| || ||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||  ||| |||||||     
T  1079651 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatct 1079552  T
Q  239 tttaa 243  Q
    |||||    
T  1079551 tttaa 1079547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 47856385 - 47856489
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    |||||||||||||||||||||||| || ||||||| ||| | ||||||||||||| ||||||||||||| ||| |||||||| |||  ||| ||||||||    
T  47856385 taggctttaatatgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatca 47856484  T
Q  239 tttaa 243  Q
    |||||    
T  47856485 tttaa 47856489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 300
Target Start/End: Complemental strand, 33156413 - 33156263
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 249  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||  |||||||||||||  |||||| ||||||||| |   ||||||||||||| | ||     
T  33156413 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaaaatttc 33156314  T
Q  250 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||  |||  || | |||||||||||||||||||||||| ||| ||||||||    
T  33156313 gtccctccccccacttaatcactgccacgtcactaattagctgacgtggca 33156263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 47857673 - 47857571
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    |||||||||||||||||||||| |||||||| | ||| | ||||||||| || | ||||||||||||||||| |||||| ||||  ||| ||||||||||    
T  47857673 ggctttaatatgtgtttcgtccctgtaattaggtgtcgtttaaaaattgatctttgtaatcgttaattctggtaaattatccttgcaaagtttaatcatt 47857574  T
Q  241 taa 243  Q
    |||    
T  47857573 taa 47857571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 6956245 - 6956350
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    ||||| ||||||||||||||||||| || ||||| || |||| |||||||| || ||| ||||||||||| ||||||||||||||||  ||| || ||||    
T  6956245 ataggttttaatatgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattacccttgcaaacttaaatc 6956344  T
Q  238 atttaa 243  Q
    ||||||    
T  6956345 atttaa 6956350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 32431617 - 32431518
Alignment:
Q  145 tttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    |||||||||| |||||||| |||||||| ||||||| ||||||||||| |||| |||||||||| ||| ||||||| ||||  ||| ||||| |||||||    
T  32431617 tttaatatgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaa 32431518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 298
Target Start/End: Original strand, 25107212 - 25107370
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| | |||||||||| ||| || ||||| ||||||| |||||||||||| || |||||| |||| |||||||||| ||| |  |||| ||||||||    
T  25107212 aggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgttaatcat 25107311  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtgg 298  Q
    |||| | || ||  |||| |  |||||||||||||||||||| | ||| ||| ||||||    
T  25107312 ttaaaatttcgtccctcatcacagttaatcactgccacgtcagtgattagctgacgtgg 25107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 303
Target Start/End: Original strand, 21783406 - 21783560
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    ||||||| |||| |||||||||||||||||| | ||||  ||||| |||||| ||| |||| || ||||| || ||| | ||| | |||||||| || ||    
T  21783406 aatatgtatttcatccttgtaattaagggtcgtttaaa--ttggttcctgtattcgctaatccttgcaaactatcctctcaaagtataatcattgaaaaa 21783503  T
Q  247 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtg 303  Q
    |||||  || | |||||||||| |||||||||||||| ||| ||| |||||||||||    
T  21783504 ttggtccctgagcctagttaatgactgccacgtcactgattagctgacgtggcagtg 21783560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 23276410 - 23276309
Alignment:
Q  143 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcattt 241  Q
    ||||||||||||||||| ||| || ||||| ||||||| ||||||||||| |||||||||| |||| | |||||||||||| |  |||  ||||||||||    
T  23276410 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattacccctacaaacgttaatcattt 23276311  T
Q  242 aa 243  Q
    ||    
T  23276310 aa 23276309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 43607782 - 43607855
Alignment:
Q  144 ctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaa 216  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||||| ||||||||||||||| || |||||    
T  43607782 ctttaatatgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcgttaatccttgcaaa 43607855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 2796176 - 2796262
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||| ||||||| |||  |||||| ||||| ||||||| ||||||||||| |||||||||| |||| ||||||| ||||||||    
T  2796176 ataggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttaccctt 2796262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 140 - 289
Target Start/End: Complemental strand, 23458409 - 23458259
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | |||||||||||| ||||||||| |||| || |||| ||||||||  |   ||||||||    
T  23458409 taggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatca 23458310  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    ||||| | || ||  |||  || | |||||||||||||| |||||||||||    
T  23458309 tttaaaatttcgtccctctccccacttaatcactgccacatcactaatttg 23458259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 29118536 - 29118610
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||||||||||| ||||||||    
T  29118536 atgtgtttcgtccttgcaattatgcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttaccctt 29118610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 281
Target Start/End: Complemental strand, 9368726 - 9368589
Alignment:
Q  145 tttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    |||||||||| ||||||||||| ||||| ||||| | ||||||||||| ||||||||| ||||| || ||||||||| |||  |   |||||||||||||    
T  9368726 tttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatttaa 9368627  T
Q  244 gaattggtttctcaacctagttaatcactgccacgtca 281  Q
     | || ||| || |||| | ||||| | ||||||||||    
T  9368626 aatttcgttccttaacccacttaatgattgccacgtca 9368589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 300
Target Start/End: Complemental strand, 33689809 - 33689648
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| |||| || ||| ||||| ||||| | |||||||||| || |||||||| |||| ||||||| ||||||||  |   ||||||||    
T  33689809 taggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatca 33689710  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||||| | || ||  |||  || | |||||||||||||||||||||||| | | ||||||||    
T  33689709 tttaaaatttcgtccctctccccacttaatcactgccacgtcactaattcgatgacgtggca 33689648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 43998156 - 43998228
Alignment:
Q  153 gtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattaccctt 224  Q
    ||||||| || ||||||||| | ||||| |||||||| ||||| |||||||||||||||||||| ||||||||    
T  43998156 gtgtttcatcattgtaattatgtgtcatttaaaaattagtccttgtaatcgttaattctggcaatttaccctt 43998228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 9294386 - 9294227
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| ||| |||||| |||| ||||||| ||||||||  |   ||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatt 9294287  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||| | || ||  |||  || | |||||||||| || |||||||||||| | ||||||||    
T  9294286 taaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtggca 9294227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 300
Target Start/End: Complemental strand, 25108522 - 25108364
Alignment:
Q  143 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcattt 241  Q
    ||||||||||||||||| ||| || ||||| ||||||| ||||| ||||| |||||||| | |||| |||||||| |  || |  |||  ||||||||||    
T  25108522 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgctaatcctggcaaactgtccctgcaaacgttaatcattt 25108423  T
Q  242 aagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    || | || ||   ||| |  |||||||||||||||||||||| ||| ||| ||||||||    
T  25108422 aaaatttcgtccttcatcacagttaatcactgccacgtcactgattagctgacgtggca 25108364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 33689381 - 33689527
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    |||||| ||||||| |||| |||||| ||||| ||||| | |||||||||||| |||| ||| ||||||| ||||| || ||||  ||   |||||||||    
T  33689381 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcatgtattcgctaattcttgcaaactagccttgcaatcattaatcatt 33689480  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatt 287  Q
    ||| | || ||   |  ||| | ||||||||||||||||||||||||    
T  33689481 taaaattttgtcctttgaccaacttaatcactgccacgtcactaatt 33689527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 300
Target Start/End: Original strand, 36314307 - 36314457
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 249  Q
    ||||| || ||||||| ||||| | ||||| |||||||| |||| |||||| | |||| ||||||| ||| ||||  || | |||||||||||| | |||    
T  36314307 atgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttg 36314406  T
Q  250 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  36314407 gtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggca 36314457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 286
Target Start/End: Complemental strand, 54318059 - 54317914
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||| |||||||||| ||||||| || || | ||||| ||| || |||||| |||| |||||||| ||| ||| ||||| |   ||| |||||||||    
T  54318059 aggcttttatatgtgtttagtccttgcaaatatgagtcatttaagaaatggtccatgtattcgttaatactgacaatttacc-tcccaaaatttaatcat 54317961  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaat 286  Q
    |||| | || || ||||  |||| |||||||||||||||||||||||    
T  54317960 ttaaaatttcgtctctctccctaattaatcactgccacgtcactaat 54317914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 43608896 - 43608808
Alignment:
Q  156 tttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    |||||||| || ||||| || |||| |||||||||||| |||||||||||||| || | |||||| ||||  ||| |||||||||||||    
T  43608896 tttcgtccctgcaattagggatcatttaaaaattggtctctgtaatcgttaatcctcgtaaattaaccttgcaaagtttaatcatttaa 43608808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 3469614 - 3469543
Alignment:
Q  154 tgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  3469614 tgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttaccctt 3469543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 19741321 - 19741218
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| ||||  |||||| |||||||| ||   |||||||||    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcat 19741222  T
Q  240 ttaa 243  Q
    ||||    
T  19741221 ttaa 19741218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 29118955 - 29118884
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacc 221  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||| ||||||| |||||    
T  29118955 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttacc 29118884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 300
Target Start/End: Original strand, 23457988 - 23458138
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 249  Q
    |||| |||| |||||| ||||||||||| | ||||||||||||| |||| ||| |||| || ||||| || ||||  ||   |||||||||||| | ||     
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttc 23458087  T
Q  250 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  23458088 gtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggca 23458138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 32306841 - 32306767
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||  |||||||| |||| ||||||| ||||||||    
T  32306841 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttaccctt 32306767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 33506187 - 33506253
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaatt-ggtcctgtaatcgttaattctggcaaa 216  Q
    |||||||||||||||| ||||| | ||||| |||||||| | |||| |||||| |||||||||||||    
T  33506187 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctataatcgctaattctggcaaa 33506253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 37778690 - 37778616
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||| | |||| ||||||| ||||||||    
T  37778690 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttaccctt 37778616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 40788837 - 40788767
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattac 220  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||    
T  40788837 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 40788767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 41988581 - 41988663
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattac 220  Q
    ||||| || ||||||| |||| ||||| ||| |||||||||| ||||||||||| |||||| ||  ||||||| |||||||||    
T  41988581 ataggtttaaatatgtatttcctccttataaataagggtcatttaaaaattggtccctgtattcactaattcttgcaaattac 41988663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 47551502 - 47551576
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| |||||   ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  47551502 atgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttaccctt 47551576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 40758540 - 40758487
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 193  Q
    ||||||| ||||||| |||| |||||| ||||| ||||||| ||||||||||||    
T  40758540 taggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtc 40758487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 8041890 - 8041854
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  8041890 ttaatcactgccacgtcactaatttgatgacgtggca 8041854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 289
Target Start/End: Original strand, 9367737 - 9367889
Alignment:
Q  138 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaat 236  Q
    ||||||||| ||||||| |||  ||| |  ||||| ||||| | |||||| ||||| ||||| ||| |||| || ||||| || ||||  || | |||||    
T  9367737 aataggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaat 9367836  T
Q  237 catttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    ||||||| | || ||  |||| || | ||||||||||||||||||||||||||    
T  9367837 catttaaaatttcgtccctcatcccaattaatcactgccacgtcactaatttg 9367889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 36418121 - 36418041
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaa 216  Q
    |||| ||||| ||||||| |||| |||||||||||| ||||| | |||||||||| ||||||| ||| |||| || |||||    
T  36418121 aaattggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaa 36418041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 48322500 - 48322536
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  48322500 ttaatcactgccacgtcactaatttgatgacgtggca 48322536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 51994313 - 51994233
Alignment:
Q  143 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattaccc 222  Q
    |||| ||||||| |||  |||||| ||||| || || | |||||||||||||| ||||||| |||||||||||| ||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttaccc 51994233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 54466697 - 54466661
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  54466697 ttaatcactgccacgtcactaatttgatgacgtggca 54466661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 55052402 - 55052438
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  55052402 ttaatcactgccacgtcactaatttgatgacgtggca 55052438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 6589788 - 6589685
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||| ||||||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||    
T  6589788 aggctataatatgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatcat 6589689  T
Q  240 ttaa 243  Q
    ||||    
T  6589688 ttaa 6589685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 28230168 - 28230065
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| || |||||||||||||| ||| |||||||||    
T  28230168 aggctttaatatgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaatcat 28230069  T
Q  240 ttaa 243  Q
    ||||    
T  28230068 ttaa 28230065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 288
Target Start/End: Original strand, 28228668 - 28228817
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    |||||||||||||||||||||||| || ||||| ||||||| ||||||||||| |||||||||||||||  ||||||||||| |||| ||| ||||||||    
T  28228668 taggctttaatatgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcgtggcaaattactctttcaaagtttaatca 28228767  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaattt 288  Q
    ||| | | || ||| || |||| | ||||| ||||||| ||| |||||||    
T  28228768 tttgaaatttagttccttaacccacttaatgactgccatgtccctaattt 28228817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 286
Target Start/End: Complemental strand, 3653506 - 3653363
Alignment:
Q  143 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcattt 241  Q
    ||||||||| |||| |||||| |||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||||  ||| |||||||||||    
T  3653506 gctttaatacgtgtgtcgtccctgtaattatgggtcatttaaaaattggtccatgtaatcgttaa-tctggcaaattacccttgcaaagtttaatcattt 3653408  T
Q  242 aagaattggtttctcaacctagttaatcactgccacgtcactaat 286  Q
    || | || ||  |||  || ||||||||||| |||||||||||||    
T  3653407 aaaatttcgtccctcttccaagttaatcactaccacgtcactaat 3653363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 41587244 - 41587317
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  41587244 atgtgtttcgtccttgcaattaagagtcatttaaaaattggtcctgtaatcgttaatcctggaaaattaccctt 41587317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 43742105 - 43741964
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||||||| || ||||   |||||| ||||||||||||| ||||||| ||||| ||| ||||||||||||  ||| |||||||||    
T  43742105 aggcttcaatatgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatcat 43742006  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtca 281  Q
    |||| ||||| |  ||||||| ||||||||  ||||||||||    
T  43742005 ttaaaaattgatccctcaacccagttaatcggtgccacgtca 43741964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 202781 - 202682
Alignment:
Q  145 tttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    |||||||||||||| |||| |||||||| ||||||| |||||||| |||| ||||||||||||| ||||||||||| ||||  | | |||||||||||||    
T  202781 tttaatatgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaa 202682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 39423515 - 39423674
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| |||| || |||| |||||||||||| ||||| | |||||||||||| ||||||||| |||||||||||| ||| |||| ||   ||||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcatt 39423614  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||| | || ||  |||  || | ||||||||||||| |||||||||||| | ||||||||    
T  39423615 taaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtggca 39423674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 39936677 - 39936573
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    ||||||||||||||||||||||||| || ||||| | ||  | | ||||||||||| ||||||||||||| ||||||||||||||||  ||| |||||||    
T  39936677 ataggctttaatatgtgtttcgtccctgcaattaggcgtggt-ttaaaattggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatc 39936579  T
Q  238 atttaa 243  Q
    ||||||    
T  39936578 atttaa 39936573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 289
Target Start/End: Original strand, 15848095 - 15848236
Alignment:
Q  149 atatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaat 247  Q
    |||||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| |||| |||| || ||||||||  |   ||||||||||||| | |    
T  15848095 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatt 15848194  T
Q  248 tggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    | ||  |||  || | ||||||||||||||||||||||||||    
T  15848195 tcgtccctctccccacttaatcactgccacgtcactaatttg 15848236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 39935451 - 39935557
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaa 235  Q
    ||||||||||||||||||||||||||| || ||||| | ||  | |||||||||| || | ||||||||||| ||| ||||||| ||||  ||| |||||    
T  39935451 aaataggctttaatatgtgtttcgtcc-tgcaattaggtgtggtttaaaaattggttcttataatcgttaatcctgacaaattatccttgcaaagtttaa 39935549  T
Q  236 tcatttaa 243  Q
    ||||||||    
T  39935550 tcatttaa 39935557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 15604348 - 15604422
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  15604348 atgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 15604422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 28226161 - 28226087
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  28226161 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 28226087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 39498329 - 39498391
Alignment:
Q  161 tccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 222  Q
    |||||||||||| ||||| | ||||||||||| ||||||||||||||| ||||||| ||||||    
T  39498329 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttaccc 39498391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 25231279 - 25231174
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    |||||||| ||||||| |||  ||| || ||||| ||||| | ||||||||||||| |||| ||| |||| || |||||||||||||  ||| |||||||    
T  25231279 ataggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatc 25231180  T
Q  238 atttaa 243  Q
    ||||||    
T  25231179 atttaa 25231174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 34447812 - 34447865
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc 194  Q
    |||||| ||||||| |||| |||||||||||| ||||||| |||||||||||||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtcc 34447865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 136 - 300
Target Start/End: Original strand, 37895341 - 37895506
Alignment:
Q  136 gaaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaatttta 234  Q
    |||| |||||| ||||||| |||| |||||| ||||||||||| | ||||||||||| |||||| ||| |||| || ||||| || ||||  ||   |||    
T  37895341 gaaaaaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatta 37895440  T
Q  235 atcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||||||||| | ||  |   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  37895441 atcatttaaaatttcatcctttgaccaacttaatcactgccacgtcactaatttgataacgtggca 37895506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 3652212 - 3652352
Alignment:
Q  143 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcattt 241  Q
    ||||||||| |||||| |||| || ||| | || ||||  |||||||||||  | |||||||||||  |||||||||||||||  ||| |||||||||||    
T  3652212 gctttaatacgtgttttgtccctgcaatcagggatcattcaaaaattggtcaatataatcgttaatcatggcaaattacccttgcaaagtttaatcattt 3652311  T
Q  242 aagaattggtttctcaacctagttaatcactgccacgtcac 282  Q
    || | |  |||  ||  ||||||| ||||||||||||||||    
T  3652312 aaaattatgttcgtcttcctagttgatcactgccacgtcac 3652352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 10713151 - 10712992
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| |||||| ||||||||||| | |||||||||||  ||||| ||| |||| || |||||||| ||||  ||   |||||||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcatt 10713052  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||| |  | ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  10713051 taaaatgtcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggca 10712992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 8710885 - 8710811
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||| ||| ||| ||||||||    
T  8710885 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttaccctt 8710811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 11163453 - 11163371
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacc 221  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| |||||    
T  11163453 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacc 11163371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 41588475 - 41588405
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattac 220  Q
    |||||||||||||||  ||||| | ||||| |||||||| |||| |||||||| |||||||||||| ||||    
T  41588475 atgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttac 41588405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 36382159 - 36382320
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| | ||||| |||| |||||| ||||| || || | ||||||||||||| | |||||| |||| ||| ||| ||||||||  |   ||||||||    
T  36382159 taggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatca 36382258  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||||| | ||  |  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  36382259 tttaaaatttcatccctctccccacttaatcactgccacgtcactaatttgatgacgtggca 36382320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 36382556 - 36382503
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc 194  Q
    |||||| ||||||| |||| |||||| ||||||||||| | |||||||||||||    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcc 36382503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 44713801 - 44713846
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 193  Q
    ||||||| |||| |||||||||||||||||| | ||||||||||||    
T  44713801 aatatgtatttcatccttgtaattaagggtcgtttaaaaattggtc 44713846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 1695863 - 1695899
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  1695863 ttaatcactgccacgtcactaatttgatgacgtggca 1695899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 6658152 - 6658116
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  6658152 ttaatcactgccacgtcactaatttgatgacgtggca 6658116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 11163177 - 11163213
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  11163177 ttaatcactgccacgtcactaatttgatgacgtggca 11163213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 13995796 - 13995832
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  13995796 ttaatcactgccacgtcactaatttgatgacgtggca 13995832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 15848393 - 15848357
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  15848393 ttaatcactgccacgtcactaatttgatgacgtggca 15848357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 16099329 - 16099293
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  16099329 ttaatcactgccacgtcactaatttgatgacgtggca 16099293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 25893556 - 25893488
Alignment:
Q  231 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggc 299  Q
    ||||||||||||| |||| |||||||  ||   ||||||||||||||||| |||||| ||| |||||||    
T  25893556 tttaatcatttaaaaattcgtttctctccccccttaatcactgccacgtccctaattagctgacgtggc 25893488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 33062173 - 33062209
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  33062173 ttaatcactgccacgtcactaatttgatgacgtggca 33062209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 34448100 - 34448064
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  34448100 ttaatcactgccacgtcactaatttgatgacgtggca 34448064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 4e-30; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 139 - 293
Target Start/End: Original strand, 44522144 - 44522299
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    |||||||| | |||||||||||||| || ||||| || |||| |||||||||| || ||||||||||||| || |||||||| |||| |||| |||||||    
T  44522144 ataggcttaagtatgtgtttcgtccctgcaattagggatcatttaaaaattggaccctgtaatcgttaatcctagcaaattatccttgtaaagtttaatc 44522243  T
Q  238 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgctta 293  Q
    |||||||||||||| | |||||| ||||||||| ||||| |||||| ||| |||||    
T  44522244 atttaagaattggtctttcaacccagttaatcagtgccaagtcactgattagctta 44522299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 289
Target Start/End: Original strand, 6367562 - 6367710
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||||  |   ||||||||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 6367661  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    ||| | || ||  |||  || | ||||||||||||||||||||||||||    
T  6367662 taaaatttcgtccctctccccacttaatcactgccacgtcactaatttg 6367710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 5734005 - 5734087
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaatta 219  Q
    |||||||||| ||||||| ||||||||||| ||||| ||||| | |||||||||||| |||||||| |||| || ||||||||    
T  5734005 aaataggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcatgtaatcgctaatccttgcaaatta 5734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 35038464 - 35038534
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattac 220  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||| || |||||||||    
T  35038464 atgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattac 35038534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 289
Target Start/End: Complemental strand, 17662279 - 17662130
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||| |||||| ||||  ||||| | ||||||||||| ||| ||||||||||| ||||||| ||||||||  |   |||||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcat 17662180  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    |||| | || ||  |||  || | ||||||||||||||||||||||||||    
T  17662179 ttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatttg 17662130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 302
Target Start/End: Complemental strand, 34850493 - 34850332
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| |||| ||| |||| || |||||||||||||  ||| ||||||||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatt 34850394  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagt 302  Q
    ||| | ||  |  |||  || | |||||||||||||||||||| ||| ||| ||||||||||    
T  34850393 taaaatttcatccctctccccacttaatcactgccacgtcactgattagctgacgtggcagt 34850332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 19515815 - 19515902
Alignment:
Q  138 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||  |||||||||||||||||| || ||||||||    
T  19515815 aataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttaccctt 19515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 32132303 - 32132406
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    ||||||||||||||||||||||| |  |||||  |||||| |||||||| |||| ||||||||||||| || ||||||||| |||  ||| ||||||||     
T  32132303 aggctttaatatgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattactcttacaaagtttaatcaa 32132402  T
Q  240 ttaa 243  Q
    ||||    
T  32132403 ttaa 32132406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 34464449 - 34464608
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||| |||||||| ||||  |||||| ||||||||  ||  ||||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatt 34464548  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||| | || ||   |  ||| | |||||||||||||||||||||||| | | ||||||||    
T  34464549 taaaatttcgtcatttgaccaacttaatcactgccacgtcactaattcgatgacgtggca 34464608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 140 - 289
Target Start/End: Complemental strand, 34464879 - 34464729
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| |||| |||||| ||||| ||||  | ||||||||||||| |||||||| ||||  |||||| ||||||||  ||  ||||||||    
T  34464879 taggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatca 34464780  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    ||||| | || ||  |||  || | ||||||||||||| ||||||||||||    
T  34464779 tttaaaattttgtccctctccccacttaatcactgccatgtcactaatttg 34464729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 40714453 - 40714527
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| || ||||||||||||||| ||||||| ||||||||    
T  40714453 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaccctt 40714527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 23209757 - 23209672
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||| |||||||| |||| ||||||| ||||||||    
T  23209757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttaccctt 23209672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 28325220 - 28325147
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||| ||||| ||||| | ||||| |||||||| ||| |||||||||||||| |||||| ||||||||    
T  28325220 atgtgtttcggccttgcaattaggcgtcatttaaaaattagtcatgtaatcgttaattatggcaatttaccctt 28325147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 300
Target Start/End: Complemental strand, 6367991 - 6367831
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||| |||||| ||||||||||| | ||||||||||| |||||| ||| |||| || ||||| || ||||  ||   ||||||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 6367892  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||| | || ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  6367891 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggca 6367831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 289
Target Start/End: Complemental strand, 13914494 - 13914347
Alignment:
Q  143 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcattt 241  Q
    |||| ||||||| |||| |||||| |||||  |||  | ||||||||||||| |||||||| |||| ||||||| |||||||| ||   |||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcattt 13914395  T
Q  242 aagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    || | || ||  |||  || | | ||||||||||||||||||||||||    
T  13914394 aaaatttcgtccctctccccactaaatcactgccacgtcactaatttg 13914347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 17188963 - 17189037
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  17188963 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 17189037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 25647883 - 25647965
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 222  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| ||||||||||||||| ||||||| ||||||    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttaccc 25647965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 30326505 - 30326579
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| ||||||||| || ||||||||    
T  30326505 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttaccctt 30326579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 283
Target Start/End: Original strand, 31197065 - 31197202
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| ||| || ||||| ||||||| |||||||| ||| ||||| |||||||| |||| |||||||||||  |     ||||||||    
T  31197065 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgca-----taatcatt 31197159  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcact 283  Q
    ||| | ||  |  |||| |||||||||||||||||||||||||    
T  31197160 taaaatttcatccctcatcctagttaatcactgccacgtcact 31197202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 34849011 - 34849113
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| |||| ||| |||| || |||||||||||||  ||| ||||||||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatt 34849110  T
Q  241 taa 243  Q
    |||    
T  34849111 taa 34849113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 49955764 - 49955690
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||  ||||||||||||| ||||||| ||||||||    
T  49955764 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttaccctt 49955690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 8898526 - 8898619
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| ||||||||| || |||| ||| ||   |||||||||||||    
T  8898526 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgtattgtttaatcatttaa 8898619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 300
Target Start/End: Original strand, 46163036 - 46163189
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    ||||||| |||| || ||||||||| ||||| | ||||||||||||| |||||||| |||| ||| ||| ||||||||  |   ||||||||||||| |     
T  46163036 aatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaat 46163135  T
Q  247 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    || || ||||  || | ||||| |||| || |||||||||||| | ||||||||    
T  46163136 ttcgtctctctccccacttaattactgtcatgtcactaatttgatgacgtggca 46163189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 47999524 - 47999439
Alignment:
Q  138 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 222  Q
    ||||||||| ||||||| |||  |||||||||||| ||||| | ||||||||||| |||||||||| ||||  |||||| ||||||    
T  47999524 aataggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttaccc 47999439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 300
Target Start/End: Complemental strand, 37578621 - 37578461
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||| |||||| ||||  ||||| | |||||||||||  | ||||||| |||| ||||||| ||||||||  |    ||||||||    
T  37578621 aggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcat 37578522  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||| | || ||  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  37578521 ttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtggca 37578461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 17661851 - 17661926
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaa 216  Q
    |||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||||||| ||| |||| || |||||    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcctgtattcgctaatccttgcaaa 17661926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 17691218 - 17691297
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaatta 219  Q
    |||||||||||||| ||||||||||  || || ||||| | ||||||||||| |||||||||| |||| || ||||||||    
T  17691218 aggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaatta 17691297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 40714860 - 40714789
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacc 221  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||| ||||||| |||||    
T  40714860 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacc 40714789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 8898934 - 8898860
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||||||||| | ||||| |||||||| ||| ||||||||  |||| ||| ||| ||||||||    
T  8898934 atgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttaccctt 8898860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 17189268 - 17189194
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| |||||   ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  17189268 atgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 17189194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 20760922 - 20760848
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||  ||||| | ||||| |||||||| ||| ||||||||| |||| ||||||| ||||||||    
T  20760922 atgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttaccctt 20760848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 300
Target Start/End: Original strand, 24905176 - 24905326
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 249  Q
    ||||| || ||||||| ||||| | ||||| |||||||| |||| |||||| | |||| || |||| ||| ||||  || | |||||||||||| | |||    
T  24905176 atgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaaaatttg 24905275  T
Q  250 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  24905276 gtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggca 24905326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 35041031 - 35040957
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||||||||||||||||   ||||| |||||||| |||| |||||||| |||| ||| ||| ||||||||    
T  35041031 atgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttaccctt 35040957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 49955356 - 49955430
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  49955356 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 49955430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 302
Target Start/End: Original strand, 27998098 - 27998135
Alignment:
Q  265 taatcactgccacgtcactaatttgcttacgtggcagt 302  Q
    ||||||||||||||||||||||||||| || |||||||    
T  27998098 taatcactgccacgtcactaatttgctgacatggcagt 27998135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 32133354 - 32133249
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagg-gtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    |||||||||||||||||||| | | || ||||| || ||| | |||||||| ||||| ||||||||||||  |||||||||| |||   ||| |||||||    
T  32133354 taggctttaatatgtgtttcattcctgcaattagggagtcctttaaaaattcgtccttgtaatcgttaatcttggcaaattagcctcgcaaagtttaatc 32133255  T
Q  238 atttaa 243  Q
    ||||||    
T  32133254 atttaa 32133249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 35473629 - 35473706
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaa 216  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||||    
T  35473629 taggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaaa 35473706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 41098731 - 41098816
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||| ||||||| |||| | |||| ||||| ||||| | |||||||||||| ||||||||| |||| ||| ||| ||||||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttaccctt 41098816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 183344 - 183380
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  183344 ttaatcactgccacgtcactaatttgatgacgtggca 183380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 4716591 - 4716627
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  4716591 ttaatcactgccacgtcactaatttgatgacgtggca 4716627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 4960663 - 4960699
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  4960663 ttaatcactgccacgtcactaatttgatgacgtggca 4960699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 19017752 - 19017788
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  19017752 ttaatcactgccacgtcactaatttgatgacgtggca 19017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 26024422 - 26024506
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 224  Q
    |||||| ||||||| |||  | |||| ||||| ||||| | |||||||||||| ||||||||| |||| ||||||| ||||||||    
T  26024422 aggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttaccctt 26024506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 31514441 - 31514477
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  31514441 ttaatcactgccacgtcactaatttgatgacgtggca 31514477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 33442717 - 33442753
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  33442717 ttaatcactgccacgtcactaatttgatgacgtggca 33442753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 36694277 - 36694333
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 193  Q
    |||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||    
T  36694277 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 36694333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 36710378 - 36710434
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 193  Q
    |||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||    
T  36710378 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 36710434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 40439611 - 40439507
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaa-gggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    ||||||| |||| |||||| |||||| ||||| | ||||||||| || |||| ||| |||| || ||||| || ||| | ||| ||||||||||||| ||    
T  40439611 aatatgtatttcatccttgcaattaatgggtcgtttaaaaattgatcatgtattcgctaatccttgcaaactaacctctcaaagtttaatcatttaaaaa 40439512  T
Q  247 ttggt 251  Q
    |||||    
T  40439511 ttggt 40439507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 44523441 - 44523405
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  44523441 ttaatcactgccacgtcactaattagctgacgtggca 44523405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 46900029 - 46899977
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 193  Q
    |||||| ||||||| |||| ||| || ||||||||||||| ||||||||||||    
T  46900029 aggcttaaatatgtatttcatccatgcaattaagggtcatttaaaaattggtc 46899977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 49723031 - 49722995
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  49723031 ttaatcactgccacgtcactaatttgataacgtggca 49722995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 52134342 - 52134306
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  52134342 ttaatcactgccacgtcactaatttgatgacgtggca 52134306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 139 - 296
Target Start/End: Complemental strand, 28498456 - 28498298
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    ||||||||||||||||||||||||| || ||||| || |||| ||||||||||||| |||||||| |||| |||||||| ||||||   ||| |||||||    
T  28498456 ataggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatc 28498357  T
Q  238 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgt 296  Q
    |||||| | |||||  || | || |||||||||||||||||||||| ||| ||| ||||    
T  28498356 atttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 28498298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 142 - 283
Target Start/End: Complemental strand, 15116660 - 15116518
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||||||||||| ||||||||||| ||||| ||||| | |||||||||||||| ||||||| |||| || ||||| || ||||  ||| ||||||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcatt 15116561  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcact 283  Q
    ||| |||||||  ||||||| ||||||||  ||||||||||||    
T  15116560 taaaaattggtccctcaacccagttaatcgatgccacgtcact 15116518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 139 - 296
Target Start/End: Complemental strand, 29810867 - 29810709
Alignment:
Q  139 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 237  Q
    ||||||||||||||||||||||||| || ||||| || |||| ||||||||||||| |||||||  ||||  ||||||| ||||||   ||| |||||||    
T  29810867 ataggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcactaatcatggcaaactaccctcccaaagtttaatc 29810768  T
Q  238 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgt 296  Q
    |||||| | |||||  || | || |||||||||||||||||||||| ||| ||| ||||    
T  29810767 atttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 29810709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 283
Target Start/End: Original strand, 26463177 - 26463321
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| |||  ||| || ||||| ||||| | ||||||||||||| |||| |||||||| ||||||||||||||||  ||| ||||||||    
T  26463177 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatca 26463276  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcact 283  Q
    ||||| | || ||  |||| || ||||||||||||||||||||||    
T  26463277 tttaaaatttcgtccctcatcccagttaatcactgccacgtcact 26463321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 142 - 303
Target Start/End: Original strand, 12407508 - 12407670
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| |||||  |||||||| || | |||||||||||| ||||| ||| |||| || | ||||||| ||   ||| ||||||||||    
T  12407508 ggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatccttgtaaattactctagcaaagtttaatcatt 12407607  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtg 303  Q
    ||| | |||||  || |||||||||||| |||||||||||||||||| ||| |||||||||||    
T  12407608 taaaatttggtccctgaacctagttaattactgccacgtcactaattagctcacgtggcagtg 12407670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 24210543 - 24210633
Alignment:
Q  154 tgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| ||||||  | |||||||||||||  ||| |||||||||||||    
T  24210543 tgtttcgtccctgtaattaggggtcatttaaaaattggtctctgtaattgttaatcatagcaaattacccttgcaaagtttaatcatttaa 24210633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 300
Target Start/End: Original strand, 33517540 - 33517693
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    ||||||| |||| |||||||||||| || || | ||||||||||| |||||||||| |||| ||||||| ||||||||  |   ||||||||||||| |     
T  33517540 aatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaat 33517639  T
Q  247 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    || ||  |||  || | ||||||||||| |||||||||||||| | ||||||||    
T  33517640 ttcgtccctctccccacttaatcactgctacgtcactaatttgatgacgtggca 33517693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 144 - 283
Target Start/End: Original strand, 13378527 - 13378667
Alignment:
Q  144 ctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcattta 242  Q
    ||||||||||| |||  ||| || || || ||||||| |||||| ||||||| ||| | |||||| ||||||| || ||||  |||| |||||||| |||    
T  13378527 ctttaatatgtatttactccctgcaaataggggtcatttaaaaaatggtccttgtatttgttaatcctggcaatttgccctcctaaaatttaatcactta 13378626  T
Q  243 agaattggtttctcaacctagttaatcactgccacgtcact 283  Q
    | |||||||  ||||||| ||||||||| ||||||||||||    
T  13378627 aaaattggtccctcaacccagttaatcagtgccacgtcact 13378667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 300
Target Start/End: Complemental strand, 21628142 - 21627982
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||| |||||| ||||| |||||   ||||||||||||| |||||||| |||| ||| ||| ||||||||  |   |||||||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 21628043  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||| | || ||  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  21628042 ttaaaattttgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggca 21627982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 139807 - 139872
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaat 207  Q
    |||||||||||||||||| || | |||||||| ||||||| |||||||||||| |||||||||||||    
T  139807 aggctttaatatgtgttttgttcctgtaatta-gggtcatttaaaaattggtcatgtaatcgttaat 139872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 147828 - 147893
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaat 207  Q
    |||||||||||||||||| || | |||||||| ||||||| |||||||||||| |||||||||||||    
T  147828 aggctttaatatgtgttttgttcctgtaatta-gggtcatttaaaaattggtcatgtaatcgttaat 147893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 7905252 - 7905326
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| ||||||||||||| ||||||| ||||||||    
T  7905252 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttaccctt 7905326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 287
Target Start/End: Complemental strand, 26464627 - 26464481
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| ||| || ||||| ||||||| |||||| |||||| |||| | |||||| ||||||| || ||||  ||||  ||||||| |    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgtatttgttaatcctggcaattttccctcctaaaaattaatcact 26464528  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatt 287  Q
    ||| ||||| |  ||||||||||||||||| |||||| || ||||||    
T  26464527 taaaaattgatccctcaacctagttaatcagtgccacatcgctaatt 26464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 15913965 - 15913893
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccc 222  Q
    |||||||||||||||| ||||||||||||| |||||||| |||| | |||||||||||  ||| |||||||||    
T  15913965 atgtgtttcgtccttgcaattaagggtcatttaaaaatttgtccatataatcgttaatcttggaaaattaccc 15913893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 3176429 - 3176376
Alignment:
Q  169 attaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacc 221  Q
    |||| ||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  3176429 attaggggtcatttaaaaattggtcactgtaatcgttaattctgtcaaattacc 3176376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 280
Target Start/End: Complemental strand, 8090357 - 8090216
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    ||||||| ||||||| || | |||||| ||||| ||||| | ||||||||||||| |||| ||  |||| || |||||||||||||  ||| ||||||||    
T  8090357 taggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatca 8090258  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtc 280  Q
    ||||| | |||||  || | || ||||||| | |||||||||    
T  8090257 tttaaaatttggtccctgagcccagttaattattgccacgtc 8090216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 21836041 - 21836114
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||||| |||| ||||| | ||||| |||||||| ||| |||||||| |||| ||||||| ||||||||    
T  21836041 atgtgtttcgttcttgcaattaggcgtcatttaaaaattagtcttgtaatcgctaatcctggcaatttaccctt 21836114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 30337447 - 30337532
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||||    
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccctt 30337532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 141162 - 141066
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    ||||||||||||||||||| |||||   || || |||||||| || ||||||||||||||| || ||||||||| |||  |||  ||||||||||||    
T  141162 aatatgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattactcttgcaaaaattaatcatttaa 141066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 149183 - 149087
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 243  Q
    ||||||||||||||||||| |||||   || || |||||||| || ||||||||||||||| || ||||||||| |||  |||  ||||||||||||    
T  149183 aatatgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattactcttgcaaaaattaatcatttaa 149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 300
Target Start/End: Complemental strand, 33517963 - 33517803
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||| |||| ||| |||| || ||||| || ||||  ||   ||||||||    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcat 33517864  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||| | || ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  33517863 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggca 33517803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 287
Target Start/End: Complemental strand, 30726192 - 30726041
Alignment:
Q  137 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaa 235  Q
    |||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| |||||| ||| |||| || ||||| || ||||  ||   ||||    
T  30726192 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaa 30726093  T
Q  236 tcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatt 287  Q
    |||||||| | || ||   |  ||| | ||||||||||||||||||||||||    
T  30726092 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 30726041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 7160813 - 7160883
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattac 220  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||| ||||||| ||||    
T  7160813 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttac 7160883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 7905660 - 7905586
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| || ||||| |||| | |||||| |||||||||||| ||||||||    
T  7905660 atgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttaccctt 7905586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 15115339 - 15115441
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| |||||| |||||  | || | ||||||||||||| | ||||||||||| || |||||||| ||||  ||| ||||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatt 15115438  T
Q  241 taa 243  Q
    |||    
T  15115439 taa 15115441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 22502783 - 22502857
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||| ||| ||| ||||||||    
T  22502783 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttaccctt 22502857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 22503191 - 22503117
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||| ||||||| ||| ||||    
T  22503191 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatcctt 22503117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 31406887 - 31406949
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctgg 212  Q
    |||||||||||||||| ||||| | ||||| |||||||| || ||||||||||||||| ||||    
T  31406887 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgg 31406949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 33647053 - 33647122
Alignment:
Q  231 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    ||||||||||||| | || || ||||  || | |||||||||||||||||||||||||| | ||||||||    
T  33647053 tttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcactaatttgatgacgtggca 33647122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 8089442 - 8089526
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 224  Q
    |||||| ||||||| || | ||| || ||||| ||||| | ||||||||||||| | ||||||||||| || |||||||||||||    
T  8089442 aggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattaccctt 8089526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 17734319 - 17734355
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  17734319 ttaatcactgccacgtcactaatttgatgacgtggca 17734355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 28000508 - 28000544
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  28000508 ttaatcactgccacgtcactaatttgatgacgtggca 28000544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 30804166 - 30804130
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  30804166 ttaatcactgccacgtcactaatttgatgacgtggca 30804130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 142 - 302
Target Start/End: Complemental strand, 239979 - 239818
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    |||||| |||||||||||||||||| | ||| ||||||| ||||||||||| |||||||||| |||| ||||||||||||||||  ||| ||||||||||    
T  239979 ggcttttatatgtgtttcgtccttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatt 239880  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagt 302  Q
    ||| | || ||  ||  ||| | ||||| |||||||| ||||| ||| ||| ||||||||||    
T  239879 taaaatttcgtccctacacccacttaattactgccacatcactgattagctgacgtggcagt 239818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 140 - 299
Target Start/End: Original strand, 23229 - 23389
Alignment:
Q  140 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 238  Q
    |||||||| ||||||||||||||| || || || | ||||| ||||||||||||  |||| | |||||| ||| |||  || ||||  ||| ||||||||    
T  23229 taggctttgatatgtgtttcgtccctgcaaatatgagtcatttaaaaattggtctatgtatttgttaatcctgtcaatctatccttccaaagtttaatca 23328  T
Q  239 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggc 299  Q
    ||||| | ||||||||||  || | |||||||||||||||||| ||||||||| |||||||    
T  23329 tttaaaatttggtttctccccccacttaatcactgccacgtcagtaatttgctgacgtggc 23389  T

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Target: scaffold0220; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 298
Target Start/End: Complemental strand, 24775 - 24617
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctg-taatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||||||||||| |||| ||| || |  || ||||||| ||||||||||||||  || | |||||| |||||||  || |||   ||| |||||||||    
T  24775 aggctttaatatgtttttcatccctgcatataggggtcatttaaaaattggtccttatatttgttaatcctggcaatctatcctccaaaagtttaatcat 24676  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtgg 298  Q
    |||| | || || ||| | || ||||||| |||||||||||||| ||| ||| ||||||    
T  24675 ttaaaattttgtctctgagcccagttaattactgccacgtcactgattagctgacgtgg 24617  T

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Target: scaffold0031 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 289
Target Start/End: Original strand, 68965 - 69113
Alignment:
Q  142 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 240  Q
    ||||| ||||||| |||| |||||| ||||| ||||||| ||||||||||| |||||||||  |||| ||||||| ||||||||  |   ||||||||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatt 69064  T
Q  241 taagaattggtttctcaacctagttaatcactgccacgtcactaatttg 289  Q
    ||| | || ||  |||  || | ||||||||||||||||||||||||||    
T  69065 taaaatttcgtccctctccccacttaatcactgccacgtcactaatttg 69113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 12656 - 12525
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 249  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| ||||||||||||| ||||||| ||||||||  |   ||||||||||||| | ||     
T  12656 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 12557  T
Q  250 gtttctcaacctagttaatcactgccacgtca 281  Q
    |||  |  ||||| ||||||||||||||||||    
T  12556 gttctttgacctacttaatcactgccacgtca 12525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 6400 - 6266
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 246  Q
    |||||||||||| |||||| ||||| ||||||  ||||||||||||| | |||||| |||| || |||||||||||||  ||  ||||||||||||| |     
T  6400 aatatgtgtttcttccttgaaattaggggtcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaat 6301  T
Q  247 ttggtttctcaacctagttaatcactgccacgtca 281  Q
    || ||| || |||| | ||||| ||||||||||||    
T  6300 ttcgttccttaacccacttaatgactgccacgtca 6266  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 300
Target Start/End: Complemental strand, 37992 - 37832
Alignment:
Q  141 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcat 239  Q
    |||||| ||||||| |||| |||||| ||||| | ||| | |||||||||||| | ||||||| |||| ||| ||| |||||||| ||   |||||||||    
T  37992 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcat 37893  T
Q  240 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||| | || ||  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  37892 ttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggca 37832  T

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Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 11557 - 11426
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 249  Q
    ||||||||| |||||| ||||| | ||||| |||||||| |||| ||||||||||||| ||||||| ||||||||  |   ||||||||||||| | ||     
T  11557 atgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 11458  T
Q  250 gtttctcaacctagttaatcactgccacgtca 281  Q
    || | |  ||| | ||||||||||||||||||    
T  11457 gtcttttgaccaacttaatcactgccacgtca 11426  T

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Target: scaffold0182 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 31714 - 31780
Alignment:
Q  231 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtg 297  Q
    |||||||| |||| ||||||| |||||||| ||||||||| |||||||||||| ||| ||| |||||    
T  31714 tttaatcacttaaaaattggtctctcaacccagttaatcaatgccacgtcactgattagctgacgtg 31780  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 221800 - 221873
Alignment:
Q  151 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 224  Q
    ||||||||||| |||| ||||| | ||||| |||||||| ||| |||||||| |||| ||||||| ||||||||    
T  221800 atgtgtttcgttcttgcaattaggcgtcatttaaaaattagtcttgtaatcgctaatcctggcaatttaccctt 221873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 19863 - 19937
Alignment:
Q  148 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacc 221  Q
    ||||||| ||||||||||| ||||| ||||| | ||||||||||| ||||| |||| |||| || ||||||||||    
T  19863 aatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacc 19937  T

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Target: scaffold0559 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 1507 - 1471
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  1507 ttaatcactgccacgtcactaatttgatgacgtggca 1471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 14552 - 14588
Alignment:
Q  264 ttaatcactgccacgtcactaatttgcttacgtggca 300  Q
    |||||||||||||||||||||||||| | ||||||||    
T  14552 ttaatcactgccacgtcactaatttgatgacgtggca 14588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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