View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19440_low_11 (Length: 316)
Name: NF19440_low_11
Description: NF19440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19440_low_11 |
 | |
|
| [»] scaffold1064 (1 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
| [»] scaffold0038 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 9238444 - 9238144
Alignment:
| Q |
1 |
gtatgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaa-gactttgaagcttgacatatttgaatttttgaggaaaaaact |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9238444 |
gtatgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaaagactttgaagcttgacatatttgaatttttgaggaaaaaact |
9238345 |
T |
|
| Q |
100 |
tggtgttgtgaacattcagcagttataaattaagggggagtattagaatatgaatacataattggttagatataatattaatgtgattcacattgcaagc |
199 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9238344 |
tggtgttgtgaacattcagcagttatgaattaaggggaagtattagaatatgaatacatcattggttagatataatattaatgtgattcacattgcaagc |
9238245 |
T |
|
| Q |
200 |
ataatatctattcttctctttcagttttacaactttatttttcaatttctgtcatcttgctaaaacagcttatttggataagcatttctgccacatataa |
299 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||| |||||||| |
|
|
| T |
9238244 |
ataatctctattcttctctttcagttttacaactttatttttctatttctgtcatcttgctaaaatagtttatttggataagcatttctgctacatataa |
9238145 |
T |
|
| Q |
300 |
g |
300 |
Q |
| |
|
| |
|
|
| T |
9238144 |
g |
9238144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 177
Target Start/End: Original strand, 26905123 - 26905298
Alignment:
| Q |
3 |
atgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaa-gactttgaagcttgacatatttgaatttttgaggaaaaaacttg |
101 |
Q |
| |
|
||||||||| | || |||||||||| | || ||||||||||| ||||||||||| | ||||||||||||||| |||| ||||||| ||||| ||||||| |
|
|
| T |
26905123 |
atgattgagctacattattgtcctatagaactgcagcttgcatgtggctttacaaaggctttgaagcttgacaaatttaaatttttaaggaagaaacttg |
26905222 |
T |
|
| Q |
102 |
gtgttgtgaacattcagcagttataaattaagggggagtattagaatatgaatacataattggttagatataatat |
177 |
Q |
| |
|
||||||| || ||| ||||||||| |||||| |||||||||||| |||| ||||||||| || | ||||||||||| |
|
|
| T |
26905223 |
gtgttgttaatatttagcagttatgaattaatggggagtattagtatattaatacataactgttgagatataatat |
26905298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1064 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: scaffold1064
Description:
Target: scaffold1064; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 3 - 286
Target Start/End: Complemental strand, 2417 - 2134
Alignment:
| Q |
3 |
atgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaa-gactttgaagcttgacatatttgaatttttgaggaaaaaacttg |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
2417 |
atgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaaagactttgaagcttgaaatattttaatttttgaggaaaaaacttg |
2318 |
T |
|
| Q |
102 |
gtgttgtgaacattcagcagttataaattaagggggagtattagaatatgaatacataattggttagatataatattaatgtgattcacattgcaagcat |
201 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
2317 |
gtgttgtgaacattaagcagttatgaattaagggggagtattagaatattaatacataattggttagatataatattaatgagattcacattgtaagcat |
2218 |
T |
|
| Q |
202 |
aatatctattcttctctttcagttttacaactttatttttcaatttctgtcatcttgctaaaacagcttatttggataagcattt |
286 |
Q |
| |
|
||| |||| | |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
2217 |
aatctcta-tattctctttcagttttacaactttatttttctatttctctcgtcttgctaaaacagcttatttggataagcattt |
2134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 89; Significance: 7e-43; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 38099500 - 38099340
Alignment:
| Q |
1 |
gtatgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaa-gactttgaagcttgacatatttgaatttttgaggaaaaaact |
99 |
Q |
| |
|
|||||||||| | || |||||||||||| ||||| |||| ||| |||||||||||| | |||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
38099500 |
gtatgattgaactacaatattgtcctacagaattgtagctagcatatggctttacaaaggctttgaagcttggcatatttgaatttttgaggaagaaact |
38099401 |
T |
|
| Q |
100 |
tggtgttgtgaacattcagcagttataaattaagggggagtattagaatatgaatacataa |
160 |
Q |
| |
|
||||||||| ||||||||||| |||| |||||||||||||| ||||||||| ||||||||| |
|
|
| T |
38099400 |
tggtgttgttaacattcagcaattatgaattaagggggagtgttagaatattaatacataa |
38099340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 302194 - 302284
Alignment:
| Q |
63 |
tgaagcttgacatatttgaatttttgaggaaaaaacttggtgttgtgaacattcagcagttataaattaagggggagtattagaatatgaat |
154 |
Q |
| |
|
|||||||||||| ||||||||| |||||||| ||| | |||||| | || ||||| ||||||| |||||||||||||||| |||||||||| |
|
|
| T |
302194 |
tgaagcttgacagatttgaattcttgaggaagaaattaggtgtttttaatattcaacagttat-gattaagggggagtattggaatatgaat |
302284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 39190925 - 39190839
Alignment:
| Q |
63 |
tgaagcttgacatatttgaatttttgaggaaaaaacttggtgttgtgaacattcagcagttataaattaagggggagtattagaatat |
150 |
Q |
| |
|
|||||||||||| ||||||||| |||||||| ||| | |||||| | || || |||||||||| ||||||||||||||||||||||| |
|
|
| T |
39190925 |
tgaagcttgacagatttgaattcttgaggaagaaattaggtgtttttaatatgcagcagttat-gattaagggggagtattagaatat |
39190839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 3461580 - 3461684
Alignment:
| Q |
3 |
atgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaa-gactttgaagcttgacatatttgaatttttgaggaaaaaacttg |
101 |
Q |
| |
|
||||||||| |||| ||||| || ||| || |||| ||||| ||||| ||||||| | | | |||||||||||||||||||| ||||| || |||||| |
|
|
| T |
3461580 |
atgattgagctgcactattgccccacagaactgcaacttgctgatggttttacaaaggcagtaaagcttgacatatttgaattcttgagaaaggaacttg |
3461679 |
T |
|
| Q |
102 |
gtgtt |
106 |
Q |
| |
|
||||| |
|
|
| T |
3461680 |
gtgtt |
3461684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 6414398 - 6414556
Alignment:
| Q |
4 |
tgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaa-gactttgaagcttgacatatttgaatttttgaggaaaaaacttgg |
102 |
Q |
| |
|
||||||||||||| || ||||||||| ||||||||||||||||||| ||||||| | ||||||||||||| | |||| || |||||||||| ||||||| |
|
|
| T |
6414398 |
tgattgagttgcattactgtcctacagaattgcagcttgcagatggttttacaaaggctttgaagcttgatagatttaaacttttgaggaagaaacttgt |
6414497 |
T |
|
| Q |
103 |
tgttgtgaacattcagcagttataaattaa-gggggagtattagaatatgaatacataa |
160 |
Q |
| |
|
|||||| |||||||||||||||| |||||| |||||||||||||||| | ||||||||| |
|
|
| T |
6414498 |
tgttgttaacattcagcagttattaattaaggggggagtattagaatgttaatacataa |
6414556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 26794277 - 26794170
Alignment:
| Q |
177 |
ttaatgtgattcacattgcaagcataatatct--attcttctctttcagttttacaactttatttttcaatttctgtcatcttgctaaaacagcttattt |
274 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||| | |||| | |||||||||||||||||||||||| |
|
|
| T |
26794277 |
ttaatgagattcacattgcaagcataatctctctattcttctctttcagttttacag-tttgttttgctatttttctcatcttgctaaaacagcttattt |
26794179 |
T |
|
| Q |
275 |
ggataagca |
283 |
Q |
| |
|
| ||||||| |
|
|
| T |
26794178 |
gaataagca |
26794170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 37786901 - 37786815
Alignment:
| Q |
63 |
tgaagcttgacatatttgaatttttgaggaaaaaacttggtgttgtgaacattcagcagttataaattaagggggagtattagaatat |
150 |
Q |
| |
|
|||||||||||| ||||||||| |||||||| ||| | |||||| | || ||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
37786901 |
tgaagcttgacagatttgaattcttgaggaataaattaggtgtttttaatattcagcagttat-gattaagggggagtattggaatat |
37786815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 59499 - 59391
Alignment:
| Q |
177 |
ttaatgtgattcacattgcaagcataata--tctattcttctctttcagttttacaactttatttttcaatttctgtcatcttgctaaaacagcttattt |
274 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||||| ||||||| |
|
|
| T |
59499 |
ttaatgagattcacattgcaagcataatcactctattcttctttttcagttttacaactttattttgctatttctctcatcttgctaaaacaacttattt |
59400 |
T |
|
| Q |
275 |
ggataagca |
283 |
Q |
| |
|
||||||| |
|
|
| T |
59399 |
acataagca |
59391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 31000575 - 31000638
Alignment:
| Q |
77 |
tttgaatttttgaggaaaaaacttggtgttgtgaacattcagcagttataaattaagggggagt |
140 |
Q |
| |
|
||||||||||||||||| ||||||| |||| | |||||||||||||||| |||||||||||||| |
|
|
| T |
31000575 |
tttgaatttttgaggaagaaacttgatgtttttaacattcagcagttatgaattaagggggagt |
31000638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 14234185 - 14234285
Alignment:
| Q |
177 |
ttaatgtgattcacattgcaagcataatatct--attcttctctttcagttttacaactttatttttcaatttctgtcatcttgctaaaacagcttattt |
274 |
Q |
| |
|
|||||| |||||| |||||||||||||| ||| ||||||||||||||||||| | |||||||| | |||| | |||||||||||||||| ||||||| |
|
|
| T |
14234185 |
ttaatgagattcaaattgcaagcataatgtctctattcttctctttcagtttttacagtttattttgctatttttctcatcttgctaaaacatcttattt |
14234284 |
T |
|
| Q |
275 |
g |
275 |
Q |
| |
|
| |
|
|
| T |
14234285 |
g |
14234285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 17156520 - 17156474
Alignment:
| Q |
244 |
atttctgtcatcttgctaaaacagcttatttggataagcatttctgc |
290 |
Q |
| |
|
|||||| |||||||||||||||||||||| || ||||||| |||||| |
|
|
| T |
17156520 |
atttctctcatcttgctaaaacagcttatctgcataagcacttctgc |
17156474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 14233910 - 14234014
Alignment:
| Q |
3 |
atgattgagttgcagtattgtcctacataattgcagcttgcagatggctttac-aagactttgaagcttgacatatttgaatttttgaggaaaaaacttg |
101 |
Q |
| |
|
||||||||| |||| |||||||| || | |||| ||||||||||| ||||| ||| | | || ||||||| |||||||||||| ||||| ||||||| |
|
|
| T |
14233910 |
atgattgaggtgcaatattgtcccactgagctgcaacttgcagatggttttactaaggcagtaaaacttgacagatttgaattttttaggaagaaacttg |
14234009 |
T |
|
| Q |
102 |
gtgtt |
106 |
Q |
| |
|
||||| |
|
|
| T |
14234010 |
gtgtt |
14234014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 51810651 - 51810743
Alignment:
| Q |
184 |
gattcacattgcaagcataatatc--tattcttctctttcagttttacaactttatttttcaatttctgtcatcttgctaaaacagcttatttg |
275 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| | |||| | ||||||||||||||| |||||||| |
|
|
| T |
51810651 |
gattcacattgcaagcataatatctttattcttctctttcag-tttacagttttattttgctatttttcacatcttgctaaaacaacttatttg |
51810743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 30380507 - 30380606
Alignment:
| Q |
63 |
tgaagcttgacatatttgaatttttgaggaaaaaacttggtgttgtgaacattcagcagttataaattaagggggagtattagaatatgaatacataatt |
162 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| | | |||| ||||||| |||||||| ||||||||||||| ||| |||||| |
|
|
| T |
30380507 |
tgaagcttgacatattttaatttttgaggaaaaaacttggtgtttttgatgttcaacagttat-gattaagggaaagtattagaatattaatcaataatt |
30380605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 296930 - 297016
Alignment:
| Q |
64 |
gaagcttgacatatttgaatttttgaggaaaaaacttggtg-ttgtgaacattcagcagttataaattaagggggagtattagaatat |
150 |
Q |
| |
|
||||||||||| ||||||||| |||||||| ||| | |||| || | || ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
296930 |
gaagcttgacacatttgaattcttgaggaagaaattaggtgttttttaatattcagcagttat-gattaagggggagtattagaatat |
297016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 29011111 - 29010973
Alignment:
| Q |
7 |
ttgagttgcagtattgtcctacataattgcagcttgcagatggctttacaaga-ctttgaagcttgacatatttgaatttttgaggaaaaaacttggtgt |
105 |
Q |
| |
|
||||| |||||| |||||||||| || |||| |||||| |||| ||||| | | ||||||| ||||||| |||| | ||||| ||||| ||||||||||| |
|
|
| T |
29011111 |
ttgagctgcagttttgtcctacagaactgcaacttgcatatggttttactaaagctttgaaacttgacaaatttaagttttttaggaagaaacttggtgt |
29011012 |
T |
|
| Q |
106 |
tgtgaacattcagcagttataaattaagggggagtatta |
144 |
Q |
| |
|
| | | ||||| ||||||| ||||||| ||||||||| |
|
|
| T |
29011011 |
tttcagtattcaacagttatgaattaagatggagtatta |
29010973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 28248955 - 28249095
Alignment:
| Q |
3 |
atgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaaga-ctttgaagcttgacatatttgaatttttgaggaaaaaacttg |
101 |
Q |
| |
|
|||||||||||||| || || || ||| || | || ||||| ||||| ||||||| | | |||||||||||| ||||||||| |||||||| ||| | | |
|
|
| T |
28248955 |
atgattgagttgcactactgccccacagaactacaacttgctgatggttttacaaaagcagtgaagcttgacaaatttgaattcttgaggaagaaattag |
28249054 |
T |
|
| Q |
102 |
gtgttgtgaacattcagcagttataaattaagggggagtatt |
143 |
Q |
| |
|
||||| | || |||||| |||||| |||||||||||||||| |
|
|
| T |
28249055 |
gtgttcttaatattcagtagttat-gattaagggggagtatt |
28249095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 11187090 - 11186979
Alignment:
| Q |
37 |
agcttgcagatggctttacaaga-ctttgaagcttgacatatttgaatttttgaggaaaaaacttggtgttgtgaacattcagcagttataaattaaggg |
135 |
Q |
| |
|
||||||||||||| ||||||| | | |||| ||| || ||||||||||||||||||| ||||| ||| || | | |||||||||||| | ||||||| |
|
|
| T |
11187090 |
agcttgcagatggttttacaaaagcagtgaaacttcacgtatttgaatttttgaggaagaaactaggtatttttgatgttcagcagttatga-ttaaggg |
11186992 |
T |
|
| Q |
136 |
ggagtattagaat |
148 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11186991 |
ggagtattagaat |
11186979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 49117 - 49257
Alignment:
| Q |
3 |
atgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaaga-ctttgaagcttgacatatttgaatttttgaggaaaaaacttg |
101 |
Q |
| |
|
|||||||||||||| || || || ||| || | || ||||| ||||| ||||||| | | |||||||||||| ||||||||| |||||||| ||| | | |
|
|
| T |
49117 |
atgattgagttgcactactgccccacagaactacaacttgctgatggttttacaaaagcagtgaagcttgacaaatttgaattcttgaggaagaaattag |
49216 |
T |
|
| Q |
102 |
gtgttgtgaacattcagcagttataaattaagggggagtatt |
143 |
Q |
| |
|
||||| | || |||||| |||||| |||||||||||||||| |
|
|
| T |
49217 |
gtgttcttaatattcagtagttat-gattaagggggagtatt |
49257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 50778465 - 50778361
Alignment:
| Q |
3 |
atgattgagttgcagtattgtcctacataattgcagcttgcagatggctttacaa-gactttgaagcttgacatatttgaatttttgaggaaaaaacttg |
101 |
Q |
| |
|
||||||||| |||| ||||| || ||| || |||| ||||| ||||||||||||| | | | |||||||||| |||||||||||| ||||| |||||| |
|
|
| T |
50778465 |
atgattgagctgcactattgccccacagaactgcaacttgctgatggctttacaaaggcagtaaagcttgacagatttgaattttttaggaaggaacttg |
50778366 |
T |
|
| Q |
102 |
gtgtt |
106 |
Q |
| |
|
||||| |
|
|
| T |
50778365 |
gtgtt |
50778361 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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