View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19442_high_10 (Length: 292)
Name: NF19442_high_10
Description: NF19442
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19442_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 14 - 286
Target Start/End: Complemental strand, 40479129 - 40478857
Alignment:
| Q |
14 |
ttctagaatattttcatcctttttaggttatctgaatcaagttagatggagaatatttggcatctggaaacttatttaattattaggttcgaccgtttga |
113 |
Q |
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| T |
40479129 |
ttctagaatattttcatccattttaggttatctgaatcaagttagatggagaatatttggcatctggaaacttatttaattattaggttcgaccgtttga |
40479030 |
T |
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| Q |
114 |
aaacgtgcccatttagttaattattgtttcttttccttcattatcagataattgagatttgagagtacttattagtggagtagtccttcgtgctacgttt |
213 |
Q |
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| T |
40479029 |
aaacgtgcccatttagttaattattgtttattttccttcattatcagataattgagatttgagagtacttattagtggagtagtccttcgtgctacgttt |
40478930 |
T |
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| Q |
214 |
tttgttaccttgaacagaaaataaaagactccannnnnnnatataattgcttttgcatatttccactatgatc |
286 |
Q |
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| T |
40478929 |
tttgttaccttaaacagaaaataaaagactccatttttttatataattgcttttgcatatttccactatgatc |
40478857 |
T |
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