View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19443_low_7 (Length: 294)
Name: NF19443_low_7
Description: NF19443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19443_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 16 - 284
Target Start/End: Complemental strand, 10959280 - 10959012
Alignment:
| Q |
16 |
ataacaaattcaaaaatagttcttgaagaaaaaacgatccttttttatacaatatgaaacaaattttagtttcgtccattagataaaacttcttgatgta |
115 |
Q |
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| T |
10959280 |
ataacaaattcaaaaatagttcttgaaaaaaaaacgatccttttttatacaatatgaaacaaattttagtttcgtccattagataaaacttcttgatgta |
10959181 |
T |
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| Q |
116 |
tcaaaagaagaatattaacaactttatataggtgctaattagattactcagttgcaatgctttgatttatggaatacctgcggaaagattatatgtaata |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10959180 |
tcaaaagaagaatattaacaactttatataggtgctaattagattactcagttgcaatgctttgatttatggaatacctgcggaaagattatatgtaata |
10959081 |
T |
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| Q |
216 |
gcttatatgttaaaccatctgctaggagaagctcttcaaattgattttatcaatcaatctcttcctttg |
284 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10959080 |
gcttatctgttaaaccatctgctaggagaagctcttcaaattgattttatcaatcaatctcttcctttg |
10959012 |
T |
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