View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19443_low_9 (Length: 227)
Name: NF19443_low_9
Description: NF19443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19443_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 21840461 - 21840679
Alignment:
| Q |
6 |
gtaatttgcacttttaaaattaaaatcttgttaatgaaa---taataaaatgttattaacacatataattaaccaaaagaaaagaaagacaatatgtata |
102 |
Q |
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| T |
21840461 |
gtaatttgcacttttaaaattaaaatcttgttaatgaaaaaataataaaatgttattaacacatataattaaccaaaagaaaagaaagacaatatatatt |
21840560 |
T |
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| Q |
103 |
tactaaccaaaatttggaagaagttaattgcacctgcacctctttaagatgtatatgccgtacaattacacaaagaaactctgatacaaaacattttatg |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
21840561 |
tactaaccaaaatttggaagaagttaattgcacctgcacctctttaagatgtatatgccgtacaattacacacagaaactctgatacaaaacattttatg |
21840660 |
T |
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| Q |
203 |
ctgaaaagttgcatcattt |
221 |
Q |
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||||||||||||||||||| |
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| T |
21840661 |
ctgaaaagttgcatcattt |
21840679 |
T |
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