View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19444_high_24 (Length: 381)
Name: NF19444_high_24
Description: NF19444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19444_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 4 - 367
Target Start/End: Complemental strand, 22497989 - 22497626
Alignment:
| Q |
4 |
aggtcgctcgaaagtaaaatccgtaccaaatgtcgtttgagccatgaacttttacaatcacagaaatgccaatatccattaatctaaccttatgttggaa |
103 |
Q |
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| T |
22497989 |
aggtcgctcgaaagtaaaatccgtaccaaatgtcgtttgagccatgaacttttacaatcacagaaatgccaatatccattaatctaaccttatgttggaa |
22497890 |
T |
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| Q |
104 |
atcctttacttgctgagatcacaggtgtgccatgatagcaattgaagtagtctcagcaaaaggatggtctaaccttatgttggaaactgagtcattgctt |
203 |
Q |
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| T |
22497889 |
atcctttacttgctgagatcacaggtgtgccatgatagcaattgaagtagtctcagcaaaaggatggtctaaccttatgttggaaactgagtcattgctt |
22497790 |
T |
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| Q |
204 |
attttaaaggccttctcttatatttgatatagttccttggaagatagaaatagatggtggaactataatttgcaaatcataaagagtatgaaattcatga |
303 |
Q |
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| T |
22497789 |
attttaaaggccttctcttatatttgatatagttccttggaagatagaaatagatggtggaactataatttgcaaatcataaagagtatgaaattcatga |
22497690 |
T |
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| Q |
304 |
tttcccatattttgagggaaggaagtcgttgtgtagagaaaatggctaactcagggctcaatgt |
367 |
Q |
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| T |
22497689 |
tttcccatattttgagggaaggaagtcgttgtgtagagaaaatggctaactcagggctcaatgt |
22497626 |
T |
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