View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19444_high_30 (Length: 335)
Name: NF19444_high_30
Description: NF19444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19444_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 19 - 326
Target Start/End: Complemental strand, 47126815 - 47126507
Alignment:
| Q |
19 |
taaatgtcattatatttttctaaaatatttcttatcatttgataaagttatacgaccatattagtagaatttgagctcaaatcattcaatgtcgttggtg |
118 |
Q |
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| T |
47126815 |
taaatgtcattaaatttttctaaaatatttcttatcatttgataaagttatacgaccatattagtagaatttgagctcaaatcattcaatgtcgttggtg |
47126716 |
T |
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| Q |
119 |
tagtaacgtgaattttactttatagtagagatatgttttaacacaatataaggtaaagtttaactggatccttataaccatgtcatgacgcgcttcaaga |
218 |
Q |
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| T |
47126715 |
tagtaacgtgaattttactttatagtagagatatgttttaacacaatataaggtaaagtttaactggatccttataactatgtcatgacacgcttcaaga |
47126616 |
T |
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| Q |
219 |
tatgtatctaacaaaggat-nnnnnnntgtgtaccaatttactgaagaatgatagctccataaaaacgaaagaccttggatcaaacattactatacatgt |
317 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47126615 |
tatgtatctaacaaaggataaaaaaaatgtgtaccaatttactgaagaatgatagctccataaaaacgaaagaccttggatcaaacattactatacatgt |
47126516 |
T |
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| Q |
318 |
tagaattat |
326 |
Q |
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| T |
47126515 |
tagaattat |
47126507 |
T |
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