View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19444_high_43 (Length: 255)
Name: NF19444_high_43
Description: NF19444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19444_high_43 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 2251405 - 2251184
Alignment:
| Q |
16 |
attatagcttcccctaatatcattgtaacatttttccttttatttttatgtacattttcatcctctacccgtacttccttcgactcatccgagattaata |
115 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2251405 |
attatagcttcccccaatatcattgtaacatttttccttttatttttatgtacattttcatcctctacccgtacttccttcgactcatccgagattaata |
2251306 |
T |
|
| Q |
116 |
atgtcaatgtcgacgacattgaccaaaccaaccatgattcatcatttcctatgtctgttaagaatcctcttgatcaaaactctattttcctccctagtga |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2251305 |
atgtcaatgtcgacgacattgaccaaaccaaccatgattcatcatttcctatgtctgttaagaatcctcttgatcaaaactctattttcctccctagtga |
2251206 |
T |
|
| Q |
216 |
gaatctacccgaacctgattcc |
237 |
Q |
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|||||||||||||||||||||| |
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| T |
2251205 |
gaatctacccgaacctgattcc |
2251184 |
T |
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