View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19444_low_50 (Length: 243)
Name: NF19444_low_50
Description: NF19444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19444_low_50 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 26945201 - 26944985
Alignment:
| Q |
18 |
tttcacactcacctaccaaaaacaaaatagaattataattagatatgaatacatttatctaaatatgcaaaagatgtggcaatcatttctttttgaagta |
117 |
Q |
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| T |
26945201 |
tttcacactcacctaccaaaaacaaaatagaattataattagatatgaatacatttatctaaatatgcaaaagatgtggcaatcatttctttttgaagta |
26945102 |
T |
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| Q |
118 |
accaattctttttaatataaaatagagtactagaggtactccaagctatatataaaagaagataaatttcacttcaaaaataaaaatattctgataatgg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
26945101 |
accaattctttttaatataaaatagagtactagaggtactccaagctatatataaaagaagagaaatttcacttcaaaaataaaaatattctgataatgg |
26945002 |
T |
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| Q |
218 |
aaaggatcttcatataa |
234 |
Q |
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||||||||||||||||| |
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| T |
26945001 |
aaaggatcttcatataa |
26944985 |
T |
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