View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19445_high_27 (Length: 391)

Name: NF19445_high_27
Description: NF19445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19445_high_27
NF19445_high_27
[»] chr8 (21 HSPs)
chr8 (10-374)||(7964925-7965289)
chr8 (10-164)||(7980676-7980828)
chr8 (10-121)||(7982583-7982695)
chr8 (27-121)||(7974638-7974733)
chr8 (288-373)||(8223728-8223815)
chr8 (166-242)||(7974318-7974394)
chr8 (289-374)||(43974784-43974871)
chr8 (311-374)||(44967468-44967531)
chr8 (297-374)||(13586289-13586368)
chr8 (314-374)||(44967384-44967444)
chr8 (289-344)||(16047108-16047165)
chr8 (312-374)||(43974668-43974730)
chr8 (315-373)||(44508151-44508209)
chr8 (289-373)||(43649514-43649596)
chr8 (311-348)||(21349421-21349458)
chr8 (326-374)||(22932071-22932119)
chr8 (311-346)||(8213510-8213545)
chr8 (289-345)||(23120521-23120579)
chr8 (289-344)||(508261-508318)
chr8 (289-344)||(45537327-45537384)
chr8 (312-344)||(22643689-22643721)
[»] chr1 (9 HSPs)
chr1 (288-373)||(15723264-15723351)
chr1 (290-374)||(19193779-19193865)
chr1 (290-374)||(44201644-44201730)
chr1 (287-374)||(46351887-46351976)
chr1 (290-374)||(45652507-45652593)
chr1 (289-374)||(42958670-42958758)
chr1 (292-344)||(2248044-2248098)
chr1 (323-373)||(46758024-46758074)
chr1 (311-352)||(25613993-25614034)
[»] chr7 (9 HSPs)
chr7 (287-374)||(18535659-18535749)
chr7 (289-374)||(39703097-39703184)
chr7 (311-373)||(1966332-1966394)
chr7 (311-374)||(3568533-3568596)
chr7 (289-360)||(1723428-1723501)
chr7 (290-360)||(13796575-13796647)
chr7 (326-374)||(12314854-12314902)
chr7 (289-344)||(10206658-10206715)
chr7 (288-338)||(48644159-48644211)
[»] scaffold0214 (2 HSPs)
scaffold0214 (288-374)||(29205-29293)
scaffold0214 (290-374)||(21707-21793)
[»] chr6 (30 HSPs)
chr6 (288-374)||(15907065-15907153)
chr6 (290-372)||(21683171-21683255)
chr6 (290-374)||(18801446-18801532)
chr6 (290-374)||(23160751-23160837)
chr6 (290-372)||(20881972-20882056)
chr6 (287-374)||(31569306-31569394)
chr6 (287-374)||(14463488-14463577)
chr6 (290-373)||(19382970-19383055)
chr6 (290-353)||(21393419-21393484)
chr6 (290-374)||(18715273-18715359)
chr6 (289-374)||(7456841-7456928)
chr6 (289-360)||(31877199-31877272)
chr6 (290-352)||(19214781-19214845)
chr6 (287-344)||(22680960-22681017)
chr6 (287-344)||(17102636-17102695)
chr6 (290-360)||(14603961-14604033)
chr6 (290-344)||(17724582-17724638)
chr6 (287-349)||(32616895-32616959)
chr6 (288-341)||(8909971-8910026)
chr6 (292-349)||(13548340-13548399)
chr6 (309-373)||(18175932-18175996)
chr6 (289-346)||(19002767-19002826)
chr6 (287-344)||(22291703-22291756)
chr6 (289-344)||(8848080-8848136)
chr6 (300-351)||(10929423-10929476)
chr6 (300-351)||(16308045-16308098)
chr6 (290-344)||(2666146-2666202)
chr6 (315-352)||(23094602-23094639)
chr6 (309-373)||(18223805-18223869)
chr6 (289-346)||(18691734-18691793)
[»] chr2 (9 HSPs)
chr2 (288-373)||(24079482-24079569)
chr2 (290-374)||(25417080-25417166)
chr2 (290-344)||(31898587-31898643)
chr2 (311-374)||(44481333-44481396)
chr2 (311-374)||(5783490-5783553)
chr2 (289-352)||(24863911-24863976)
chr2 (290-344)||(2707137-2707193)
chr2 (290-343)||(29406693-29406748)
chr2 (291-344)||(18817519-18817574)
[»] chr4 (11 HSPs)
chr4 (289-373)||(43593819-43593905)
chr4 (289-371)||(50377325-50377409)
chr4 (309-374)||(52374277-52374342)
chr4 (290-374)||(1701212-1701298)
chr4 (290-374)||(18811299-18811385)
chr4 (290-360)||(13757135-13757207)
chr4 (315-374)||(16612249-16612308)
chr4 (315-374)||(19112086-19112145)
chr4 (314-373)||(14464133-14464192)
chr4 (310-351)||(9296842-9296883)
chr4 (286-351)||(16526368-16526435)
[»] chr5 (10 HSPs)
chr5 (290-373)||(42883046-42883131)
chr5 (288-374)||(35328808-35328896)
chr5 (289-374)||(38925436-38925523)
chr5 (288-373)||(21112709-21112796)
chr5 (288-344)||(22362555-22362613)
chr5 (292-372)||(22545788-22545870)
chr5 (329-374)||(19835236-19835281)
chr5 (309-374)||(32727065-32727130)
chr5 (289-342)||(42920363-42920418)
chr5 (296-344)||(27032683-27032733)
[»] scaffold0041 (1 HSPs)
scaffold0041 (288-360)||(32266-32338)
[»] scaffold0283 (2 HSPs)
scaffold0283 (311-374)||(13602-13665)
scaffold0283 (314-374)||(13518-13578)
[»] chr3 (14 HSPs)
chr3 (290-373)||(9767905-9767990)
chr3 (290-346)||(53157279-53157337)
chr3 (290-373)||(46124028-46124113)
chr3 (288-352)||(18740861-18740927)
chr3 (287-346)||(51425362-51425423)
chr3 (290-340)||(41935248-41935300)
chr3 (289-374)||(7566963-7567050)
chr3 (289-352)||(11028071-11028135)
chr3 (290-349)||(15212737-15212798)
chr3 (290-349)||(15251956-15252017)
chr3 (288-349)||(6079876-6079939)
chr3 (289-340)||(14163410-14163463)
chr3 (290-344)||(21972645-21972701)
chr3 (290-344)||(21995076-21995132)
[»] scaffold0077 (1 HSPs)
scaffold0077 (290-352)||(52532-52596)
[»] scaffold0557 (1 HSPs)
scaffold0557 (290-374)||(6435-6521)
[»] scaffold0337 (1 HSPs)
scaffold0337 (288-349)||(786-849)
[»] scaffold0159 (1 HSPs)
scaffold0159 (311-374)||(36953-37016)
[»] scaffold0179 (1 HSPs)
scaffold0179 (290-352)||(28436-28500)
[»] scaffold0072 (1 HSPs)
scaffold0072 (290-344)||(46284-46340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (290-352)||(102232-102296)
[»] scaffold0590 (1 HSPs)
scaffold0590 (311-353)||(8961-9003)
[»] scaffold0054 (2 HSPs)
scaffold0054 (289-360)||(28786-28859)
scaffold0054 (287-374)||(49668-49757)
[»] scaffold0553 (1 HSPs)
scaffold0553 (290-344)||(6549-6605)
[»] scaffold0320 (1 HSPs)
scaffold0320 (289-346)||(14206-14265)
[»] scaffold0003 (1 HSPs)
scaffold0003 (299-352)||(163144-163199)
[»] scaffold0281 (1 HSPs)
scaffold0281 (293-344)||(4589-4642)
[»] scaffold0164 (1 HSPs)
scaffold0164 (291-352)||(5195-5257)


Alignment Details
Target: chr8 (Bit Score: 297; Significance: 1e-167; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 10 - 374
Target Start/End: Complemental strand, 7965289 - 7964925
Alignment:
Q  10 ataattctatgagaatccatgtttttattgaagtcaaaagccttagatgcgtttgaagaaaattaaagtcaagggaggatcacatgaacttgatttcaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7965289 ataattctatgagaatccatgtttttattgaagtcaaaagccttagatgcgtttgaagaaaattaaagttaagggaggatcacatgaacttgatttcaaa 7965190  T
Q  110 tatgaaaggataggttcgttatgttactcagggaatgctattttccaagctgaagctttttcaaatcatgcattaatttttgctaattaattgccgaagt 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7965189 tatgaaaggataggttcgttatgttactcagggaatgctattttcctagttgaagctttttcaaatcatgcattaatttttgctaattacttgccgaagt 7965090  T
Q  210 caaatgcataagttaattaaagtttcgtgaatcactggggacacatctctcgctacaattagaagtgcccttattagaatactagcgtccagacgggcac 309  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7965089 caaatgcataagttaattaaagtttcgcgaatcactggggacacatctctcgctacaaatagaagtgcccttattagaatactagcgtccagacgggcac 7964990  T
Q  310 tcgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
      ||| |||||| ||||||||||| ||||| || | ||||| |||| |||| |||||||||||||    
T  7964989 gagtgtccgtctgtccgctctttccactgcacttacgcatgcaacttataaacagtatgtttttc 7964925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 7980828 - 7980676
Alignment:
Q  10 ataattctatgagaatccatgtttttattgaagtcaaaagccttagatgcgtttgaagaaaattaaagtcaagggaggatcacatgaacttgatttcaaa 109  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7980828 ataattctatgagaatccatgtttttattgatg-caaaagccttagatgcgtttgaagaaaattaaagtcaagggaggatgacatgaacttgatttcaaa 7980730  T
Q  110 tatgaaaggataggttcgttatgttactcagggaatgctattttccaagctgaag 164  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  7980729 tatgaaaggataggttcgttatgttactc-cggaatgctattttcctagctgaag 7980676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 7982695 - 7982583
Alignment:
Q  10 ataattctatgagaatccatgtttttattgaagtca-aaagccttagatgcgtttgaagaaaattaaagtcaagggaggatcacatgaacttgatttcaa 108  Q
    |||||| |||||||||||| ||||| ||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7982695 ataattatatgagaatccaagttttaattgatgtctgaaagccttagatgcgtttgaagaaaattaaagtcaagggaggatcacatgaacttgatttcaa 7982596  T
Q  109 atatgaaaggata 121  Q
    |||||||||||||    
T  7982595 atatgaaaggata 7982583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 7974733 - 7974638
Alignment:
Q  27 catgtttttattgaagtcaa-aagccttagatgcgtttgaagaaaattaaagtcaagggaggatcacatgaacttgatttcaaatatgaaaggata 121  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7974733 catgtttttattgatgtcagtaagccttagatgcgtttgaagaaaattatagtcaagggaggatcacatgaacttgatttcaaatatgaaaggata 7974638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 373
Target Start/End: Original strand, 8223728 - 8223815
Alignment:
Q  288 atactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  8223728 atactagcgtccagacgggcactcccgtgcccttctgtccgctctttctactgcactaacgcatgtaactcataaacagtatgttttt 8223815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 7974394 - 7974318
Alignment:
Q  166 tttttcaaatcatgcattaattttt-gctaattaattgccgaagtcaaatgcataagttaattaaagtttcgtgaatc 242  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  7974394 tttttcaaatcatgcattaattttttgctaattaattgcc-aagtcaaatgcataagttaattaaaggctcgtgaatc 7974318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 43974871 - 43974784
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||||||||||||||||||  ||| |||| | ||||||||||||| |||||||| ||||||||||||||| || ||||||||||    
T  43974871 tactagcgtccagacgggcactcccgtgtccgtttgtccgctctttctattgcgctaacgcatgtaactcataaacaatatgtttttc 43974784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 44967468 - 44967531
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  44967468 cgtgcccgtctgtccgctctttctactgcgctaacgcatgtaactcataaacaatatgtttttc 44967531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 13586368 - 13586289
Alignment:
Q  297 tccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||||||||||  |||||||||| || |||||||||||||| | || ||||||||||||||| || ||||||||||    
T  13586368 tccagacgggcactcccgtgcccgtctgtctgctctttctactgcacgaacgcatgtaactcataaacattatgtttttc 13586289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 44967384 - 44967444
Alignment:
Q  314 gcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||| || ||||||||||    
T  44967384 gcccgtctgtccgctctttccactgcgctaacgcatgtaactcataaacaatatgtttttc 44967444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 16047165 - 16047108
Alignment:
Q  289 tactagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||||||||||  |||||| |||| ||||||||||||||||||||||    
T  16047165 tactagcgtccagacgggcacttccgtgcctgtctgtccgctctttctactgcgctaa 16047108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 374
Target Start/End: Complemental strand, 43974730 - 43974668
Alignment:
Q  312 gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||| || |||||||||||||||||||||  ||||||||||||||| || ||||||||||    
T  43974730 gtgcccgcctgtccgctctttctactgcgctagcgcatgtaactcataaacaatatgtttttc 43974668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 44508151 - 44508209
Alignment:
Q  315 cccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    ||||||| |||||||||||||||||||||| |||||||||||| || || |||||||||    
T  44508151 cccgtctgtccgctctttctactgcgctaacgcatgtaactcacaaacaatatgttttt 44508209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 43649514 - 43649596
Alignment:
Q  289 tactagcgtccagacgggcactcgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||||| ||| | || ||||| |||| || ||| |||||    
T  43649514 tactagcgtccagacgggcac--gtgcccgtctattcgctctttctactgcgataacgtatataacttataaacaatatattttt 43649596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 348
Target Start/End: Original strand, 21349421 - 21349458
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatgca 348  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  21349421 cgtgcccgtctgtccgctctttctactgcgctaatgca 21349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 374
Target Start/End: Original strand, 22932071 - 22932119
Alignment:
Q  326 gctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||||||||||| ||||||||||||||| || ||| ||||||    
T  22932071 gctctttctactgcgctaacgcatgtaactcataaacattatatttttc 22932119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 346
Target Start/End: Complemental strand, 8213545 - 8213510
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatg 346  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8213545 cgtgcccgtctgtccgctctttctactgcgctaatg 8213510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 23120521 - 23120579
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaat 345  Q
    ||||||||||||||||| |||||  |||||| ||| |||||| ||||||||||||||||    
T  23120521 tactagcgtccagacggacactcccgtgcccatctgtccgctttttctactgcgctaat 23120579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 508261 - 508318
Alignment:
Q  289 tactagcgtccagacgggca--ctcgtgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||||||||  ||||||||||||| |||||  ||| |||||||||||    
T  508261 tactagcgtccagacgggcactctcgtgcccgtctgtccgcattttttactgcgctaa 508318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 45537384 - 45537327
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||||||||||||||||||||||  |||||||||| | |||| ||||||| |||||||    
T  45537384 tactagcgtccagacgggcactcctgtgcccgtctgttcgctttttctaccgcgctaa 45537327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 22643689 - 22643721
Alignment:
Q  312 gtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||||||||| ||||||||||||||||||||||    
T  22643689 gtgcccgtctgtccgctctttctactgcgctaa 22643721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 373
Target Start/End: Complemental strand, 15723351 - 15723264
Alignment:
Q  288 atactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  15723351 atactagcgtccagacgggcactcccgtgcccgtctgtccgctctttctactgcgctaacgcatgtaactcataaacagtatgttttt 15723264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 19193865 - 19193779
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||||||||||||||  ||||| |||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  19193865 actagcgtccagacgggcactcctgtgcctgtctgtccgctctttctactgcgctaacgcatgtaactcataaacaatatgtttttc 19193779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 44201730 - 44201644
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||| ||||||||||||  |||||||||| |||||||||||||||||||||| |||| |||||||||| || ||||||||||    
T  44201730 actagcgtctagacgggcactcccgtgcccgtctgtccgctctttctactgcgctaacgcatataactcataaacaatatgtttttc 44201644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 374
Target Start/End: Original strand, 46351887 - 46351976
Alignment:
Q  287 aatactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||||||||||||| ||||||  |||||| ||| ||||||||||||| ||||||||  ||||||||| ||||  | ||||||||||    
T  46351887 aatactagcgtccagacgagcactcccgtgcccatctgtccgctctttctattgcgctaacacatgtaacttataaataatatgtttttc 46351976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 45652593 - 45652507
Alignment:
Q  290 actagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||| ||| |||||||  ||| ||||| | || ||||||||||||||||||| |||||||||||| || || ||||||||||    
T  45652593 actagcgtctagatgggcacttccgtacccgtttgtctgctctttctactgcgctaacgcatgtaactcacaaacaatatgtttttc 45652507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 42958758 - 42958670
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactg-cgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||| || ||||| |||||||  |||||||||| |||||||||||||||| | |||| ||||||||||| ||| || ||||||||||    
T  42958758 tactagtgttcagaccggcactcccgtgcccgtctgtccgctctttctactgccactaacgcatgtaactcgtaaacaatatgtttttc 42958670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 2248044 - 2248098
Alignment:
Q  292 tagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||||||||||||| |||||  ||| |||||| ||||||||||||||||||||||    
T  2248044 tagcgtccagacggacactcccgtgtccgtctgtccgctctttctactgcgctaa 2248098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 373
Target Start/End: Complemental strand, 46758074 - 46758024
Alignment:
Q  323 tccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    |||||| ||||||||| ||||| ||||||||||||||| || |||||||||    
T  46758074 tccgctatttctactgggctaacgcatgtaactcataaacaatatgttttt 46758024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 352
Target Start/End: Complemental strand, 25614034 - 25613993
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    ||||||||||| || ||||||||||||||||||| |||||||    
T  25614034 cgtgcccgtctgtctgctctttctactgcgctaacgcatgta 25613993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 374
Target Start/End: Original strand, 18535659 - 18535749
Alignment:
Q  287 aatactagcgtccagacgggcactc--gtgcccg-tctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  18535659 aatactagcgtccagacgggcactcccgtgcccggtctgtccgctctttctactgcgctaacgcatgtaactcataaacagtatgtttttc 18535749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 39703184 - 39703097
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||| | |||||  |||||||| |||||||||||||||||||    
T  39703184 tactagcgtccagacgggcactcccgtgcccgtctgtccgctctttctaccgggctaacccatgtaacgcataagcagtatgtttttc 39703097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 373
Target Start/End: Original strand, 1966332 - 1966394
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||| |||||    
T  1966332 cgtgcccgtctgtccgctctttctactgcgttaacgcatgtaactcataaacagtatattttt 1966394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 3568533 - 3568596
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||| ||||||||||||||||||||||  ||||||| | |||| |||||||||||||    
T  3568533 cgtgcccgtctgtccgctctttctactgcgctaacacatgtaatttataaacagtatgtttttc 3568596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 1723428 - 1723501
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataa 360  Q
    |||||||||||||||||||||||  |||||||||| | ||||||||||||||  |||| |||| ||||||||||    
T  1723428 tactagcgtccagacgggcactcccgtgcccgtctgttcgctctttctactgtactaacgcatataactcataa 1723501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 13796647 - 13796575
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataa 360  Q
    |||||||||||||| |||||||  |||| ||||| ||||||||||||| |||||||| | |||||||||||||    
T  13796647 actagcgtccagacaggcactctcgtgcacgtctgtccgctctttctattgcgctaacgtatgtaactcataa 13796575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 326 - 374
Target Start/End: Original strand, 12314854 - 12314902
Alignment:
Q  326 gctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  12314854 gctctttctactgcgttaacgcatgtaactcataaacagtatgtttttc 12314902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 10206658 - 10206715
Alignment:
Q  289 tactagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||| ||||||  ||||||||||| |||||| |||| ||||||||||    
T  10206658 tactagcgtccagaccggcacttccgtgcccgtctgtccgctttttccactgcgctaa 10206715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 48644211 - 48644159
Alignment:
Q  288 atactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactg 338  Q
    |||||||||||||||||| |||||  |||||||||| |||||| |||||||||    
T  48644211 atactagcgtccagacggacactctcgtgcccgtctgtccgctttttctactg 48644159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 374
Target Start/End: Complemental strand, 29293 - 29205
Alignment:
Q  288 atactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||| |||||||||||||||||  ||| |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  29293 atactatcgtccagacgggcactcccgtgtccgtctgtccgctctttctaccgcgctaacgcatgtaactcataagcagtatgtttttc 29205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 21707 - 21793
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||| |||||||||||||||  ||||||   | |||||| |||||||| |||||| ||||||||||||||| || ||||||||||    
T  21707 actagcatccagacgggcactcccgtgcccagttgtccgctttttctactacgctaacgcatgtaactcataaacattatgtttttc 21793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 374
Target Start/End: Complemental strand, 15907153 - 15907065
Alignment:
Q  288 atactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||| ||||||||||||  |||||||||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  15907153 atactagcgtctagacgggcactcccgtgcccgtctgtccgctctttctactgcgctaacgcatgtaactcataaacaatatgtttttc 15907065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 372
Target Start/End: Original strand, 21683171 - 21683255
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttt 372  Q
    |||||||| |||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  21683171 actagcgttcagacgggcactcccgtgcccgtctgtccgctctttctattgcgctaacgcatgtaactcataaacagtatgtttt 21683255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 18801532 - 18801446
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||| ||||||||||  |||||||||| | ||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  18801532 actagcgtccaaacgggcactcccgtgcccgtctgttcgctctttctactacgctaatgcatgttactcataaacagtatgtttttc 18801446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 23160837 - 23160751
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||  || |||||||||||| |||||| |||||    
T  23160837 actagcgtccagacgggcactcccgtgcccgtctgtccgctctttctactgcgctaacacaggtaactcataagtagtatgcttttc 23160751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 372
Target Start/End: Complemental strand, 20882056 - 20881972
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttt 372  Q
    |||||||| |||||||||||||  ||||| |||| ||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  20882056 actagcgttcagacgggcactcccgtgcctgtctgtccgctctttctattgcgctaacgcatgtaactcataaacagtatgtttt 20881972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 374
Target Start/End: Original strand, 31569306 - 31569394
Alignment:
Q  287 aatactagcgtccagacgggcactc-gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||   ||||||||||||| || ||||||||||    
T  31569306 aatactagcatctagacgggcactccgtgcccgtctgtccgctctttctactgcgctaacatatgtaactcataaacaatatgtttttc 31569394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 374
Target Start/End: Original strand, 14463488 - 14463577
Alignment:
Q  287 aatactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||||||||||||||||||||  | |||||| | | |||||||||||||||||||| |||||||||| |||| | |||||||||||    
T  14463488 aatactagcgtccagacgggcactcccgcgcccgtttgttcgctctttctactgcgctaacgcatgtaacttataaacggtatgtttttc 14463577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 19383055 - 19382970
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    ||||||||||||||||||||||  |||||||||| |||||| ||||||||||||||| | || |||||||||| || |||||||||    
T  19383055 actagcgtccagacgggcactcccgtgcccgtctgtccgctttttctactgcgctaacgtatataactcataaacaatatgttttt 19382970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 353
Target Start/End: Complemental strand, 21393484 - 21393419
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaa 353  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||||||    
T  21393484 actagcgtccagacgggcactcccgtgcccgtctgtccgctctttctactgcgctaacgcatgtaa 21393419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 18715273 - 18715359
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||| |||||||||||||  ||||| || | ||||||||||||||| |||||  ||||||||||||||| |||||||||||||    
T  18715273 actagcgttcagacgggcactcccgtgcctgtttgtccgctctttctactacgctatagcatgtaactcataaacagtatgtttttc 18715359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 7456841 - 7456928
Alignment:
Q  289 tactagcgtccagacgggcactcg--tgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||| ||||| ||||||||||||   ||| ||||| | |||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  7456841 tacttgcgtctagacgggcactcccctgctcgtctgttcgctctttctactgcgctaacgcatgtaactcataaacaatatgtttttc 7456928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 31877272 - 31877199
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataa 360  Q
    ||||||||||||||| |||||||  ||  |||||| |||||||||||||||||||||| ||||||||| |||||    
T  31877272 tactagcgtccagaccggcactcccgtatccgtctgtccgctctttctactgcgctaacgcatgtaacacataa 31877199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 19214781 - 19214845
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    ||||||||||||||||||||||  |||||||||| |||||| ||||||| ||||||| |||||||    
T  19214781 actagcgtccagacgggcactcccgtgcccgtctgtccgctttttctaccgcgctaacgcatgta 19214845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 22681017 - 22680960
Alignment:
Q  287 aatactagcgtccagacgggcactcgtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||||||||||||||||||||||  |||||||||| || ||| |||||||||||||||    
T  22681017 aatactagcgtccagacgggcacgggtgcccgtctgtctgctttttctactgcgctaa 22680960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 17102695 - 17102636
Alignment:
Q  287 aatactagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||||||||||||  | ||||| ||| ||||||||||||||||||||||    
T  17102695 aatactagcgtccagacgggcactcccatgcccatctgtccgctctttctactgcgctaa 17102636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 14604033 - 14603961
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataa 360  Q
    ||||||||||||||||||||||  || ||||||| ||| || ||||||||||||||| |||| ||||| ||||    
T  14604033 actagcgtccagacgggcactcccgtacccgtctgtccactttttctactgcgctaacgcatataactgataa 14603961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 17724638 - 17724582
Alignment:
Q  290 actagcgtccagacgggcactcg--tgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||||||||||   ||||||||| |||||| |||||||||||||||    
T  17724638 actagcgtccagacgggcactcccatgcccgtctgtccgctttttctactgcgctaa 17724582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 349
Target Start/End: Original strand, 32616895 - 32616959
Alignment:
Q  287 aatactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcat 349  Q
    ||||||| |||||||||||||||||  |||||||||| |||||| |||||||| |||||| ||||    
T  32616895 aatactaacgtccagacgggcactcccgtgcccgtctgtccgctttttctactacgctaacgcat 32616959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 8910026 - 8909971
Alignment:
Q  288 atactagcgtccagacgggca--ctcgtgcccgtctatccgctctttctactgcgc 341  Q
    |||||||||||||||||||||  |||||||||||||  ||||| ||||||||||||    
T  8910026 atactagcgtccagacgggcactctcgtgcccgtctgcccgctttttctactgcgc 8909971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 13548340 - 13548399
Alignment:
Q  292 tagcgtccagacgggca--ctcgtgcccgtctatccgctctttctactgcgctaatgcat 349  Q
    |||||||||||||||||  ||| ||||||||| |||||| ||||||||||||||| ||||    
T  13548340 tagcgtccagacgggcattctcatgcccgtctgtccgctttttctactgcgctaacgcat 13548399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 18175932 - 18175996
Alignment:
Q  309 ctcgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    ||||||||||||| ||||||||||||||| |||||| |  ||||||| |||| || |||||||||    
T  18175932 ctcgtgcccgtctgtccgctctttctactacgctaacgtgtgtaacttataaacattatgttttt 18175996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 19002826 - 19002767
Alignment:
Q  289 tactagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaatg 346  Q
    ||||||||||||||||||||||  ||| ||||||| |||||| ||||||| |||||||||    
T  19002826 tactagcgtccagacgggcactcccgtacccgtctgtccgctttttctaccgcgctaatg 19002767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 22291756 - 22291703
Alignment:
Q  287 aatactagcgtccagacgggcactcgtgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||||||||     |||||||||| ||||||||||||||||||||||    
T  22291756 aatactagcgtccagacggga----gtgcccgtctgtccgctctttctactgcgctaa 22291703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 8848080 - 8848136
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||||||||||||| ||||||||  |||||||||| |||||| |||||||||||||||    
T  8848080 tactagcgtccaga-gggcactcccgtgcccgtctgtccgctttttctactgcgctaa 8848136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 351
Target Start/End: Complemental strand, 10929476 - 10929423
Alignment:
Q  300 agacgggcact--cgtgcccgtctatccgctctttctactgcgctaatgcatgt 351  Q
    |||||||||||  ||||||||||| |||||||||||||||||| ||| ||||||    
T  10929476 agacgggcactatcgtgcccgtctgtccgctctttctactgcgttaacgcatgt 10929423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 351
Target Start/End: Complemental strand, 16308098 - 16308045
Alignment:
Q  300 agacgggcact--cgtgcccgtctatccgctctttctactgcgctaatgcatgt 351  Q
    |||||||||||  ||||||||||  |||||||||||||||||||||| ||||||    
T  16308098 agacgggcactatcgtgcccgtcagtccgctctttctactgcgctaacgcatgt 16308045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 2666202 - 2666146
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||||| |||||||||||||||  |||||||||| |||| | |||||||||||||||    
T  2666202 actagcatccagacgggcactcccgtgcccgtctgtccgttttttctactgcgctaa 2666146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 23094639 - 23094602
Alignment:
Q  315 cccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  23094639 cccgtctgtccgctctttctactgcgctaacgcatgta 23094602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 18223869 - 18223805
Alignment:
Q  309 ctcgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    ||||||||||||| ||||||||||||||| |||||| |   |||||| |||| || |||||||||    
T  18223869 ctcgtgcccgtctgtccgctctttctactacgctaacgtgcgtaacttataaacattatgttttt 18223805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 18691734 - 18691793
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatg 346  Q
    |||||||||| ||||||||| ||  |||||| ||| |||||| |||||||||||||||||    
T  18691734 tactagcgtctagacgggcattcccgtgcccatctgtccgctttttctactgcgctaatg 18691793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 373
Target Start/End: Complemental strand, 24079569 - 24079482
Alignment:
Q  288 atactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    |||||||||||||||| |||||||  ||| |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  24079569 atactagcgtccagacaggcactcccgtgtccgtctgtccgctctttctactgcgctaacgcatgtaactcataaacagtatgttttt 24079482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 25417080 - 25417166
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||||| || |||||  |||||||||| |||||||||||||||||||||| |||||||| |||||| || ||||||||||    
T  25417080 actagcgtccagatggacactcctgtgcccgtctgtccgctctttctactgcgctaacgcatgtaattcataaacattatgtttttc 25417166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 31898643 - 31898587
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  31898643 actagcgtccagacgggcactcccgtgcccgtctatccgctctttctactgcgctaa 31898587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 44481333 - 44481396
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||| |||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  44481333 cgtgtccgtctgtccgctctttctactgcgctaatacatgtaactcataaacaatatgtttttc 44481396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 5783553 - 5783490
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||| |||||| || ||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  5783553 cgtgtccgtctttctgctatttctactgcgctaacgcatgtaactcataaacagtatgtttttc 5783490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 24863911 - 24863976
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    |||||||||||||||||||||||  ||||| |||| |||||| ||||||||||||||| |||||||    
T  24863911 tactagcgtccagacgggcactctcgtgcctgtctgtccgctttttctactgcgctaacgcatgta 24863976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 2707193 - 2707137
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||    
T  2707193 actagcgtccagacgggcactcccgtgcccgtctgtccgctttttctactgcgctaa 2707137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 29406748 - 29406693
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgcta 343  Q
    ||||||||||| ||||||||||  |||||||||| |||||| ||||||||||||||    
T  29406748 actagcgtccaaacgggcactcatgtgcccgtctgtccgctttttctactgcgcta 29406693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 18817519 - 18817574
Alignment:
Q  291 ctagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||| ||| ||||||||||||  ||||| |||||||||||||||||||| ||||||    
T  18817519 ctagtgtctagacgggcactcccgtgcctgtctatccgctctttctactacgctaa 18817574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 289 - 373
Target Start/End: Complemental strand, 43593905 - 43593819
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||  |||||||||||||| || |||||||||    
T  43593905 tactagcgtccagacgggcactcccgtgcccgtctgtccgctctttctactgcgctaacacatgtaactcataaacaatatgttttt 43593819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 371
Target Start/End: Original strand, 50377325 - 50377409
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttt 371  Q
    ||||||||| |||||||||||||  |||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  50377325 tactagcgttcagacgggcactcccgtgcccgtctgtccgctctttctactgcgttaacgcatgtaactcataaacagtatgttt 50377409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 309 - 374
Target Start/End: Original strand, 52374277 - 52374342
Alignment:
Q  309 ctcgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  52374277 ctcgtgcccgtctgtccgctctttctactgcgctaacgcatgtaactcataaacagtatgtttttc 52374342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 1701212 - 1701298
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||| |||||||| |||||||||||| || || ||||||||||    
T  1701212 actagcgtccagacgggcactcccgtgcccgtctatccactctttctattgcgctaacgcatgtaactcacaaacaatatgtttttc 1701298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 18811385 - 18811299
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||||||||||| ||  |||||||||| ||| |||||||||||||||||| |||||||||||||||  ||||||||||||    
T  18811385 actagcgtccagacgggcattcccgtgcccgtctgtccactctttctactgcgctaacgcatgtaactcataaatagtatgtttttc 18811299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 13757135 - 13757207
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataa 360  Q
    ||||||||||||||||||||||  |||||||||| | ||||||||||||||| ||||||||| ||||||||||    
T  13757135 actagcgtccagacgggcactcccgtgcccgtctgttcgctctttctactgcactaatgcatataactcataa 13757207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 16612249 - 16612308
Alignment:
Q  315 cccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||| |||||||||||||||||||||| |||||||||||| || || ||||||||||    
T  16612249 cccgtctgtccgctctttctactgcgctaacgcatgtaactcacaaacaatatgtttttc 16612308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Complemental strand, 19112145 - 19112086
Alignment:
Q  315 cccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||| || ||||||||||    
T  19112145 cccgtctgtccgctctttctactgcgctaacacatgtaactcataaacaatatgtttttc 19112086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 373
Target Start/End: Complemental strand, 14464192 - 14464133
Alignment:
Q  314 gcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    |||||||| | |||||||||||||||||||| ||||||||| ||||| |||||| |||||    
T  14464192 gcccgtctgttcgctctttctactgcgctaacgcatgtaacccataaacagtattttttt 14464133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 351
Target Start/End: Complemental strand, 9296883 - 9296842
Alignment:
Q  310 tcgtgcccgtctatccgctctttctactgcgctaatgcatgt 351  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  9296883 tcgtgcccgtctgtccgctctttctactgcgctaacgcatgt 9296842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 16526435 - 16526368
Alignment:
Q  286 gaatactagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaatgcatgt 351  Q
    |||||||||||||||||||||||||  ||||||  |||  ||| | ||||||||||||||||| ||||    
T  16526435 gaatactagcgtccagacgggcactcccgtgcctatctgaccgttttttctactgcgctaatgtatgt 16526368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 42883131 - 42883046
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    ||||||||||||||||||||||  |||||||||| |||||||||| ||||||||||| ||||||||||||||| || |||||||||    
T  42883131 actagcgtccagacgggcactcccgtgcccgtctgtccgctctttttactgcgctaacgcatgtaactcataaacaatatgttttt 42883046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 35328808 - 35328896
Alignment:
Q  288 atactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||  |||||||||||||| || ||||||||||    
T  35328808 atactagcgtccagacgggcattcacgtgcccgtctgtccgctctttctactgcgctaacacatgtaactcataaacaatatgtttttc 35328896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 38925436 - 38925523
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||  ||||||| | |||| |||||||||||||    
T  38925436 tactagcgtccagacgggcactcccgtgcccgtctgtccgctctttctactacgctaacacatgtaatttataaacagtatgtttttc 38925523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 373
Target Start/End: Original strand, 21112709 - 21112796
Alignment:
Q  288 atactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||| ||| | || ||||| |||| || |||||||||    
T  21112709 atactagcgtccagacgggcactcccgtgcccgtctgtccgctctttctactgcgataacgtatataacttataaacaatatgttttt 21112796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 22362555 - 22362613
Alignment:
Q  288 atactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||    
T  22362555 atactagcgtccagacgggcactcccgtgcccgtctgtccgctttttctactgcgctaa 22362613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 22545870 - 22545788
Alignment:
Q  292 tagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttt 372  Q
    ||||||| ||||||||||||  |||||||||| |||||||| | || |||||||| ||||||||||||||| ||| |||||||    
T  22545870 tagcgtctagacgggcactcccgtgcccgtctgtccgctctatttattgcgctaacgcatgtaactcataaacagaatgtttt 22545788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 374
Target Start/End: Complemental strand, 19835281 - 19835236
Alignment:
Q  329 ctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||    
T  19835281 ctttctactgcgctaacgcatgtaactcataaacagtatgtttttc 19835236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 374
Target Start/End: Complemental strand, 32727130 - 32727065
Alignment:
Q  309 ctcgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||| |||||||| |||| |||||||| ||| || ||||||||||||||| |||||||||||||    
T  32727130 ctcgtgtccgtctattcgctttttctactacgccaacgcatgtaactcataaacagtatgtttttc 32727065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 42920363 - 42920418
Alignment:
Q  289 tactagcgtccagacgggca--ctcgtgcccgtctatccgctctttctactgcgct 342  Q
    ||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||||    
T  42920363 tactagcgtccagacgggcattctcatgcccgtctgtccgctctttctactgcgct 42920418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 27032733 - 27032683
Alignment:
Q  296 gtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  27032733 gtccagacgggcactcccgtgcccgtctgtccgctctttctactgcgctaa 27032683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 32338 - 32266
Alignment:
Q  288 atactagcgtccagacgggcactcgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataa 360  Q
    |||||||||| |||||||||||| |||||||||| |||||| ||||||||||||||| |||||||||||||||    
T  32338 atactagcgtacagacgggcactagtgcccgtctgtccgctttttctactgcgctaacgcatgtaactcataa 32266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 13602 - 13665
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  13602 cgtgcccgtctgtccgctctttctactgcgctaacgcatgtaactcataaacaatatgtttttc 13665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 13518 - 13578
Alignment:
Q  314 gcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||| || ||||||||||    
T  13518 gcccgtctgtccgctctttccactgcgctaacgcatgtaactcataaacaatatgtttttc 13578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 9767990 - 9767905
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| | || |||||||||| || || ||||||    
T  9767990 actagcgtccagacgggcactcccgtgcccgtctgtccgctctttctactgcgctaacgtatataactcataaacaatacgttttt 9767905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 53157279 - 53157337
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatg 346  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  53157279 actagcgtccagacgggcactctcgtgcccgtctgtccgctctttctactgcgctaatg 53157337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 46124028 - 46124113
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgttttt 373  Q
    |||||||| |||||||||||||  |||||||||| |||||| ||||||||||||||| | || |||||||||| || |||||||||    
T  46124028 actagcgttcagacgggcactcccgtgcccgtctgtccgctttttctactgcgctaacgtatataactcataaacaatatgttttt 46124113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 18740927 - 18740861
Alignment:
Q  288 atactagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    |||||||||||||||||||||||  ||||| ||||| ||||||||||||| |||||||||| |||||    
T  18740927 atactagcgtccagacgggcacttccgtgcgcgtctgtccgctctttctaatgcgctaatgtatgta 18740861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 51425423 - 51425362
Alignment:
Q  287 aatactagcgtccagacgggca--ctcgtgcccgtctatccgctctttctactgcgctaatg 346  Q
    |||||||||||||||| |||||  ||||||||||||| |||||||||||||||| |||||||    
T  51425423 aatactagcgtccagatgggcattctcgtgcccgtctgtccgctctttctactgtgctaatg 51425362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 340
Target Start/End: Complemental strand, 41935300 - 41935248
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcg 340  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  41935300 actagcgtccagacgggcactcccgtgcccgtctgtccgctctttctactgcg 41935248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 7566963 - 7567050
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||||||||||| ||||||  || ||||||||||||| |||||| ||||||||| ||||| || |||| | || ||||||||||    
T  7566963 tactagcgtccagacgagcactcccgtacccgtctatccgccctttctgctgcgctaacgcatgcaaatcatgaacattatgtttttc 7567050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 11028071 - 11028135
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    ||||||||||||||||| |||||  |||||||||| |||||| ||||||||||||||| |||||||    
T  11028071 tactagcgtccagacgg-cactcccgtgcccgtctgtccgctttttctactgcgctaacgcatgta 11028135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 15212737 - 15212798
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcat 349  Q
    ||||||||||||| ||||||||  |||||||||| |||||| ||||||||||||||| ||||    
T  15212737 actagcgtccagatgggcactcccgtgcccgtctgtccgctttttctactgcgctaacgcat 15212798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 15251956 - 15252017
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcat 349  Q
    ||||||||||||| ||||||||  |||||||||| |||||| ||||||||||||||| ||||    
T  15251956 actagcgtccagatgggcactcccgtgcccgtctgtccgctttttctactgcgctaacgcat 15252017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 6079939 - 6079876
Alignment:
Q  288 atactagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaatgcat 349  Q
    |||||||||| ||||| ||||||  ||||||||||| |||||| ||||||||||||||| ||||    
T  6079939 atactagcgttcagaccggcacttccgtgcccgtctgtccgctttttctactgcgctaacgcat 6079876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 14163410 - 14163463
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcg 340  Q
    ||||||||| |||||||||||||  |||||||||| |||||||||| |||||||    
T  14163410 tactagcgttcagacgggcactctcgtgcccgtctgtccgctctttttactgcg 14163463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 21972645 - 21972701
Alignment:
Q  290 actagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||||||||||||||||||||  ||||||||| | |||||| |||||||| ||||||    
T  21972645 actagcgtccagacgggcactcccgtgcccgtttgtccgctttttctactacgctaa 21972701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 21995076 - 21995132
Alignment:
Q  290 actagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||||||||||||||||||||  ||||||||| | |||||| |||||||| ||||||    
T  21995076 actagcgtccagacgggcactcccgtgcccgtttgtccgctttttctactacgctaa 21995132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 52596 - 52532
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| |||||||    
T  52596 actagcgtccagacgggcactcccgtgcccgtctgtccgctctttctactgcgctaacgcatgta 52532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 6435 - 6521
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||| |||||||||||||||  ||||| |||| ||||||||||||| |||||||| |||||||||||||||  | ||||||||||    
T  6435 actagcatccagacgggcactcccgtgcctgtctgtccgctctttctattgcgctaacgcatgtaactcataaataatatgtttttc 6521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 849 - 786
Alignment:
Q  288 atactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcat 349  Q
    ||||||||||||||||||||||||  |||||||||| |||||| ||||||||||||||| ||||    
T  849 atactagcgtccagacgggcactcccgtgcccgtctgtccgctttttctactgcgctaacgcat 786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 37016 - 36953
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||| |||||| || ||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  37016 cgtgtccgtctttctgctatttctactgcgctaacgcatgtaactcataaacagtatgtttttc 36953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 28500 - 28436
Alignment:
Q  290 actagcgtccagacgggcactcg--tgcccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    |||||||||||||| |||||||   |||||||||||||||| ||||||||||||||||| |||||    
T  28500 actagcgtccagacaggcactcccatgcccgtctatccgctttttctactgcgctaatgtatgta 28436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 46284 - 46340
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    ||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||    
T  46284 actagcgtccagacgggcactcccgtgcccgtctgtccgctttttctactgcgctaa 46340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 102232 - 102296
Alignment:
Q  290 actagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    ||||||||||||||||||||||  |||||||| | ||||||||||||||||||| || |||||||    
T  102232 actagcgtccagacgggcactcccgtgcccgtttgtccgctctttctactgcgccaacgcatgta 102296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 353
Target Start/End: Original strand, 8961 - 9003
Alignment:
Q  311 cgtgcccgtctatccgctctttctactgcgctaatgcatgtaa 353  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  8961 cgtgcccgtctgtccgctctttctactgcgctaacgcatgtaa 9003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 28859 - 28786
Alignment:
Q  289 tactagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataa 360  Q
    ||||||||| ||||||||||||  |||| |||||| ||||||| |||||||||| ||| | |||||||||||||    
T  28859 tactagcgtacagacgggcacttccgtgtccgtctgtccgctcattctactgcgttaacgtatgtaactcataa 28786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 374
Target Start/End: Original strand, 49668 - 49757
Alignment:
Q  287 aatactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgtaactcataagcagtatgtttttc 374  Q
    |||||||||||||||||||||||||  ||||| || | ||||||| ||||| || | |||  ||||||| | |||| |||||||||||||    
T  49668 aatactagcgtccagacgggcactcctgtgcctgtatgtccgctccttctattgtgataacacatgtaatttataaacagtatgtttttc 49757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 6549 - 6605
Alignment:
Q  290 actagcgtccagacgggcact--cgtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||||||||||||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  6549 actagcgtccagacgggcactcccgtacccgtctgtccgctttttctactgcgctaa 6605  T

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Target: scaffold0320 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 14265 - 14206
Alignment:
Q  289 tactagcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatg 346  Q
    ||||||||| |||| ||||||||  |||||||||| ||||||||||||||| ||||||||    
T  14265 tactagcgttcagatgggcactctcgtgcccgtctgtccgctctttctactacgctaatg 14206  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 352
Target Start/End: Original strand, 163144 - 163199
Alignment:
Q  299 cagacgggcactc--gtgcccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    |||||||||||||  || ||| ||| ||||||||||||||||||||||||||||||    
T  163144 cagacgggcactcccgtacccatctgtccgctctttctactgcgctaatgcatgta 163199  T

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Target: scaffold0281 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 4642 - 4589
Alignment:
Q  293 agcgtccagacgggcactc--gtgcccgtctatccgctctttctactgcgctaa 344  Q
    |||||||||||||| ||||  |||||||||| ||| ||||||||||||||||||    
T  4642 agcgtccagacgggtactcccgtgcccgtctgtccactctttctactgcgctaa 4589  T

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Target: scaffold0164 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 5257 - 5195
Alignment:
Q  291 ctagcgtccagacgggcactc-gtgcccgtctatccgctctttctactgcgctaatgcatgta 352  Q
    ||||||||||||||| ||||| || ||||||| | |||| ||||||||||| |||||||||||    
T  5257 ctagcgtccagacggacactccgttcccgtctgttcgctttttctactgcgttaatgcatgta 5195  T

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