View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19445_low_49 (Length: 286)

Name: NF19445_low_49
Description: NF19445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19445_low_49
NF19445_low_49
[»] chr3 (51 HSPs)
chr3 (24-268)||(52250520-52250763)
chr3 (41-263)||(48930244-48930466)
chr3 (46-263)||(7164023-7164230)
chr3 (53-199)||(6825352-6825498)
chr3 (54-218)||(44888435-44888599)
chr3 (54-204)||(31675462-31675612)
chr3 (56-204)||(31920810-31920958)
chr3 (54-173)||(19875774-19875893)
chr3 (54-224)||(12341694-12341864)
chr3 (54-225)||(962601-962772)
chr3 (54-224)||(2364808-2364978)
chr3 (54-224)||(10323010-10323180)
chr3 (63-200)||(46190032-46190169)
chr3 (46-222)||(16179470-16179646)
chr3 (54-137)||(8130482-8130565)
chr3 (54-221)||(55367141-55367308)
chr3 (62-200)||(53941842-53941980)
chr3 (46-223)||(3141374-3141551)
chr3 (54-218)||(31547902-31548073)
chr3 (48-139)||(25024368-25024459)
chr3 (54-224)||(19891208-19891378)
chr3 (54-224)||(19919668-19919838)
chr3 (119-200)||(35502975-35503056)
chr3 (62-218)||(6175923-6176079)
chr3 (64-200)||(22734186-22734322)
chr3 (54-224)||(14863904-14864074)
chr3 (54-224)||(21739962-21740132)
chr3 (54-224)||(34332254-34332424)
chr3 (94-200)||(38456723-38456829)
chr3 (68-194)||(40513193-40513319)
chr3 (56-224)||(48569478-48569646)
chr3 (48-122)||(2426821-2426895)
chr3 (54-134)||(18381590-18381669)
chr3 (93-200)||(45967921-45968028)
chr3 (162-208)||(10868242-10868288)
chr3 (68-122)||(14307753-14307807)
chr3 (54-99)||(16672449-16672494)
chr3 (94-198)||(18649956-18650060)
chr3 (53-96)||(24926255-24926298)
chr3 (73-204)||(30166803-30166934)
chr3 (162-204)||(15481217-15481259)
chr3 (70-212)||(29309955-29310097)
chr3 (54-108)||(35537299-35537353)
chr3 (54-92)||(43121238-43121276)
chr3 (58-96)||(50544759-50544797)
chr3 (52-92)||(8943875-8943914)
chr3 (94-198)||(18689376-18689480)
chr3 (52-96)||(36709439-36709483)
chr3 (164-208)||(43284806-43284850)
chr3 (52-96)||(45684705-45684749)
chr3 (162-194)||(53504697-53504729)
[»] chr2 (34 HSPs)
chr2 (24-263)||(43310760-43310999)
chr2 (24-263)||(26146716-26146955)
chr2 (24-209)||(10689056-10689240)
chr2 (41-224)||(14440262-14440445)
chr2 (41-263)||(43722443-43722648)
chr2 (54-224)||(28253251-28253421)
chr2 (93-224)||(12646091-12646222)
chr2 (68-134)||(6823956-6824022)
chr2 (52-224)||(11196880-11197052)
chr2 (52-204)||(15018206-15018358)
chr2 (62-218)||(26894057-26894213)
chr2 (62-218)||(26899496-26899652)
chr2 (54-221)||(37445624-37445792)
chr2 (106-218)||(13550700-13550812)
chr2 (106-218)||(13551153-13551265)
chr2 (54-137)||(2207348-2207431)
chr2 (54-137)||(13416202-13416285)
chr2 (162-224)||(11233929-11233991)
chr2 (54-95)||(1380613-1380654)
chr2 (54-222)||(9668447-9668615)
chr2 (112-179)||(40430003-40430070)
chr2 (54-98)||(6727343-6727387)
chr2 (120-200)||(21579625-21579705)
chr2 (52-96)||(35488366-35488410)
chr2 (68-204)||(45422065-45422201)
chr2 (220-263)||(10689235-10689278)
chr2 (52-95)||(22725007-22725050)
chr2 (55-93)||(11234049-11234087)
chr2 (162-224)||(33583866-33583928)
chr2 (160-204)||(7301300-7301344)
chr2 (48-92)||(11028395-11028439)
chr2 (52-96)||(28400117-28400161)
chr2 (120-200)||(30504774-30504854)
chr2 (54-90)||(33583924-33583960)
[»] chr7 (43 HSPs)
chr7 (24-263)||(25018718-25018957)
chr7 (24-261)||(41805161-41805382)
chr7 (54-224)||(39931035-39931205)
chr7 (54-218)||(17056060-17056224)
chr7 (54-194)||(27218591-27218731)
chr7 (62-218)||(22819162-22819318)
chr7 (54-224)||(4937567-4937737)
chr7 (62-204)||(19544861-19545003)
chr7 (62-134)||(17504088-17504160)
chr7 (62-134)||(17549054-17549126)
chr7 (56-224)||(31423135-31423303)
chr7 (54-204)||(23887615-23887764)
chr7 (54-204)||(23898791-23898940)
chr7 (54-224)||(234877-235047)
chr7 (54-134)||(34104008-34104088)
chr7 (52-204)||(45993105-45993256)
chr7 (47-134)||(11341320-11341407)
chr7 (54-137)||(45165085-45165168)
chr7 (86-136)||(8752923-8752973)
chr7 (62-212)||(13440592-13440742)
chr7 (54-224)||(17721166-17721336)
chr7 (58-221)||(36364051-36364214)
chr7 (86-200)||(39658850-39658965)
chr7 (68-203)||(46626367-46626502)
chr7 (54-224)||(11276687-11276857)
chr7 (54-224)||(29968505-29968675)
chr7 (54-207)||(47877514-47877666)
chr7 (54-134)||(20349495-20349574)
chr7 (52-96)||(33795924-33795968)
chr7 (52-96)||(36227717-36227761)
chr7 (54-221)||(13553626-13553793)
chr7 (54-134)||(6335933-6336013)
chr7 (120-184)||(9627254-9627318)
chr7 (52-96)||(18671699-18671743)
chr7 (108-200)||(40681747-40681839)
chr7 (54-88)||(12308690-12308724)
chr7 (54-92)||(34232230-34232268)
chr7 (121-194)||(27853928-27854001)
chr7 (48-92)||(17856261-17856305)
chr7 (52-96)||(18767937-18767981)
chr7 (86-134)||(23054500-23054548)
chr7 (120-200)||(29375676-29375756)
chr7 (52-96)||(34457725-34457769)
[»] scaffold0061 (1 HSPs)
scaffold0061 (47-263)||(55186-55405)
[»] scaffold0017 (1 HSPs)
scaffold0017 (47-263)||(143229-143448)
[»] scaffold0016 (1 HSPs)
scaffold0016 (34-263)||(28292-28514)
[»] chr8 (38 HSPs)
chr8 (34-263)||(12332366-12332588)
chr8 (53-263)||(36492911-36493121)
chr8 (54-221)||(29721352-29721519)
chr8 (44-224)||(8300324-8300504)
chr8 (54-218)||(37165566-37165730)
chr8 (54-224)||(7924917-7925087)
chr8 (62-224)||(20824838-20825000)
chr8 (68-204)||(36025066-36025202)
chr8 (54-224)||(25193619-25193789)
chr8 (44-207)||(172495-172658)
chr8 (54-204)||(12341098-12341248)
chr8 (54-140)||(28992752-28992838)
chr8 (54-221)||(13878929-13879096)
chr8 (54-137)||(4310368-4310451)
chr8 (62-201)||(18187685-18187824)
chr8 (162-224)||(17700119-17700181)
chr8 (54-218)||(25090918-25091082)
chr8 (54-224)||(41664807-41664977)
chr8 (64-200)||(5585230-5585366)
chr8 (54-125)||(42649750-42649821)
chr8 (53-96)||(6901439-6901482)
chr8 (54-224)||(9923132-9923302)
chr8 (54-224)||(11393787-11393957)
chr8 (54-96)||(17659362-17659404)
chr8 (162-224)||(24794385-24794447)
chr8 (54-96)||(36157685-36157727)
chr8 (162-224)||(37434398-37434460)
chr8 (61-137)||(38046896-38046972)
chr8 (166-224)||(24425385-24425443)
chr8 (162-208)||(43249259-43249305)
chr8 (54-103)||(4331721-4331770)
chr8 (53-94)||(12134857-12134898)
chr8 (54-194)||(7452883-7453023)
chr8 (54-93)||(24794288-24794327)
chr8 (62-185)||(4992175-4992299)
chr8 (162-220)||(15014131-15014189)
chr8 (162-223)||(28992669-28992730)
chr8 (120-200)||(43775295-43775375)
[»] chr5 (50 HSPs)
chr5 (53-263)||(41590626-41590836)
chr5 (53-263)||(4297709-4297919)
chr5 (54-202)||(476744-476892)
chr5 (24-263)||(21077558-21077794)
chr5 (46-224)||(33170181-33170359)
chr5 (56-204)||(380434-380582)
chr5 (69-224)||(10780747-10780902)
chr5 (62-224)||(8299621-8299783)
chr5 (54-196)||(42259811-42259953)
chr5 (54-224)||(42514251-42514421)
chr5 (54-224)||(42928662-42928832)
chr5 (54-134)||(42039234-42039314)
chr5 (54-224)||(30731753-30731923)
chr5 (54-221)||(27796015-27796182)
chr5 (46-209)||(31642034-31642197)
chr5 (54-137)||(36256309-36256392)
chr5 (44-224)||(27116612-27116792)
chr5 (107-204)||(22174453-22174550)
chr5 (52-204)||(22094709-22094861)
chr5 (54-198)||(34481479-34481623)
chr5 (54-113)||(22176376-22176435)
chr5 (93-224)||(25856878-25857009)
chr5 (54-224)||(23238914-23239084)
chr5 (54-132)||(26262962-26263040)
chr5 (57-203)||(35637669-35637815)
chr5 (54-224)||(35983230-35983400)
chr5 (54-95)||(34338415-34338456)
chr5 (120-184)||(22935665-22935729)
chr5 (54-202)||(26262337-26262484)
chr5 (54-96)||(19513032-19513074)
chr5 (54-224)||(28535115-28535284)
chr5 (52-96)||(6866893-6866937)
chr5 (54-134)||(15862206-15862286)
chr5 (162-202)||(26263447-26263487)
chr5 (62-110)||(27325303-27325351)
chr5 (70-134)||(29572401-29572465)
chr5 (70-134)||(29573778-29573842)
chr5 (70-134)||(29575155-29575219)
chr5 (70-134)||(29576532-29576596)
chr5 (70-134)||(29577909-29577973)
chr5 (70-134)||(29579286-29579350)
chr5 (52-96)||(30509614-30509658)
chr5 (52-96)||(30549954-30549998)
chr5 (83-182)||(18896109-18896208)
chr5 (98-140)||(8249425-8249467)
chr5 (54-96)||(20208286-20208328)
chr5 (162-224)||(35122145-35122207)
chr5 (121-194)||(32018962-32019035)
chr5 (52-92)||(31864770-31864810)
chr5 (52-92)||(35122277-35122317)
[»] chr1 (35 HSPs)
chr1 (41-263)||(45270759-45270981)
chr1 (54-218)||(22191227-22191391)
chr1 (54-208)||(21405368-21405522)
chr1 (77-200)||(1248049-1248172)
chr1 (54-218)||(3074276-3074440)
chr1 (54-202)||(3544562-3544710)
chr1 (54-204)||(19014443-19014592)
chr1 (48-194)||(38070357-38070503)
chr1 (54-134)||(28358421-28358501)
chr1 (52-204)||(25504453-25504605)
chr1 (54-224)||(6051134-6051304)
chr1 (54-200)||(52692002-52692148)
chr1 (51-224)||(13867272-13867445)
chr1 (46-137)||(40563084-40563175)
chr1 (68-203)||(32352770-32352905)
chr1 (93-224)||(35541604-35541735)
chr1 (87-218)||(27393394-27393525)
chr1 (162-208)||(20796296-20796342)
chr1 (114-200)||(31068727-31068813)
chr1 (54-208)||(39430808-39430962)
chr1 (62-212)||(48072882-48073032)
chr1 (75-224)||(45795827-45795976)
chr1 (159-207)||(15174746-15174794)
chr1 (46-126)||(47622614-47622694)
chr1 (53-220)||(5809111-5809278)
chr1 (162-224)||(49264403-49264465)
chr1 (54-95)||(49264532-49264573)
chr1 (54-93)||(20796199-20796238)
chr1 (166-221)||(42910210-42910265)
chr1 (53-139)||(25252184-25252270)
chr1 (54-96)||(26721164-26721206)
chr1 (98-140)||(29644313-29644355)
chr1 (162-212)||(44692059-44692109)
chr1 (52-110)||(45795735-45795793)
chr1 (152-200)||(44890075-44890123)
[»] chr6 (54 HSPs)
chr6 (46-263)||(10362656-10362872)
chr6 (86-248)||(34434823-34434985)
chr6 (54-194)||(19350475-19350615)
chr6 (54-173)||(32186214-32186333)
chr6 (54-224)||(17605773-17605943)
chr6 (54-218)||(29056050-29056214)
chr6 (54-224)||(14843576-14843746)
chr6 (46-222)||(18682015-18682191)
chr6 (76-204)||(29976467-29976595)
chr6 (56-224)||(25350755-25350923)
chr6 (54-224)||(10576689-10576859)
chr6 (52-204)||(502991-503143)
chr6 (53-225)||(13938249-13938420)
chr6 (52-204)||(19256169-19256321)
chr6 (54-224)||(14372430-14372600)
chr6 (62-202)||(1104408-1104548)
chr6 (70-218)||(15674376-15674524)
chr6 (62-218)||(23346912-23347068)
chr6 (54-134)||(26514255-26514335)
chr6 (52-204)||(33640447-33640598)
chr6 (54-224)||(13086070-13086240)
chr6 (54-207)||(2554137-2554290)
chr6 (49-218)||(14686453-14686622)
chr6 (62-134)||(7956200-7956271)
chr6 (93-224)||(21629561-21629692)
chr6 (54-96)||(11060429-11060471)
chr6 (54-96)||(17078757-17078799)
chr6 (62-208)||(17577173-17577319)
chr6 (54-96)||(18051016-18051058)
chr6 (76-134)||(18588902-18588960)
chr6 (54-128)||(10922084-10922160)
chr6 (52-96)||(8264752-8264796)
chr6 (168-224)||(17228636-17228692)
chr6 (52-96)||(33805309-33805353)
chr6 (53-96)||(23065613-23065656)
chr6 (162-224)||(20882472-20882534)
chr6 (54-95)||(2923402-2923443)
chr6 (52-96)||(5085593-5085637)
chr6 (69-137)||(12673644-12673712)
chr6 (54-98)||(15602855-15602899)
chr6 (160-208)||(26586837-26586885)
chr6 (54-92)||(649637-649675)
chr6 (162-224)||(21549487-21549549)
chr6 (162-224)||(24766853-24766915)
chr6 (162-224)||(33805419-33805481)
chr6 (153-206)||(15161272-15161325)
chr6 (114-179)||(18016703-18016768)
chr6 (123-200)||(34600866-34600943)
chr6 (123-200)||(34627411-34627488)
chr6 (86-134)||(10919993-10920041)
chr6 (62-110)||(15988063-15988111)
chr6 (53-89)||(19257429-19257465)
chr6 (162-194)||(19616348-19616380)
chr6 (106-218)||(26205924-26206036)
[»] chr4 (59 HSPs)
chr4 (75-247)||(38296258-38296430)
chr4 (54-224)||(55725145-55725315)
chr4 (54-224)||(47419335-47419505)
chr4 (54-224)||(23642030-23642200)
chr4 (54-204)||(56336959-56337109)
chr4 (54-221)||(48312625-48312792)
chr4 (54-137)||(36183068-36183151)
chr4 (46-225)||(46146200-46146379)
chr4 (54-224)||(23647688-23647858)
chr4 (54-203)||(9690953-9691102)
chr4 (46-202)||(29328238-29328395)
chr4 (52-204)||(8935603-8935755)
chr4 (52-204)||(19114965-19115117)
chr4 (62-204)||(2072079-2072221)
chr4 (54-139)||(7099013-7099098)
chr4 (54-137)||(19162703-19162786)
chr4 (46-207)||(1827996-1828157)
chr4 (62-143)||(9777909-9777990)
chr4 (54-217)||(54482605-54482768)
chr4 (54-202)||(2365537-2365685)
chr4 (52-224)||(43516187-43516359)
chr4 (62-218)||(55299151-55299307)
chr4 (54-137)||(40688597-40688680)
chr4 (124-198)||(3129454-3129528)
chr4 (46-208)||(5789547-5789709)
chr4 (54-224)||(19755798-19755968)
chr4 (54-224)||(19783838-19784008)
chr4 (48-110)||(41382498-41382560)
chr4 (73-218)||(20675572-20675717)
chr4 (151-208)||(51072148-51072205)
chr4 (124-224)||(2631999-2632099)
chr4 (52-204)||(23657826-23657978)
chr4 (52-96)||(49925834-49925878)
chr4 (54-122)||(52617406-52617474)
chr4 (53-95)||(4524194-4524236)
chr4 (162-224)||(42952944-42953006)
chr4 (54-95)||(42778769-42778810)
chr4 (52-96)||(20396111-20396155)
chr4 (54-96)||(10562900-10562942)
chr4 (46-224)||(15740743-15740921)
chr4 (98-140)||(40434242-40434284)
chr4 (127-204)||(7662767-7662844)
chr4 (62-107)||(48805517-48805562)
chr4 (94-198)||(5726186-5726290)
chr4 (120-184)||(13609928-13609992)
chr4 (52-96)||(29553307-29553351)
chr4 (56-96)||(53810374-53810414)
chr4 (162-221)||(17402704-17402763)
chr4 (52-87)||(19648238-19648273)
chr4 (54-93)||(42953064-42953103)
chr4 (120-194)||(3694046-3694120)
chr4 (162-224)||(26694567-26694629)
chr4 (145-222)||(19733422-19733499)
chr4 (46-87)||(19735311-19735352)
chr4 (67-139)||(4551340-4551412)
chr4 (94-198)||(5760044-5760148)
chr4 (104-200)||(19845588-19845684)
chr4 (168-224)||(25136049-25136105)
chr4 (54-98)||(54685141-54685185)
[»] scaffold0043 (1 HSPs)
scaffold0043 (54-202)||(34070-34218)
[»] scaffold1350 (1 HSPs)
scaffold1350 (54-224)||(75-245)
[»] scaffold0034 (1 HSPs)
scaffold0034 (54-224)||(105282-105452)
[»] scaffold0189 (1 HSPs)
scaffold0189 (48-139)||(6613-6704)
[»] scaffold0048 (1 HSPs)
scaffold0048 (86-224)||(63738-63876)
[»] scaffold0029 (1 HSPs)
scaffold0029 (54-204)||(134313-134463)
[»] scaffold0002 (2 HSPs)
scaffold0002 (54-204)||(312140-312290)
scaffold0002 (54-204)||(327594-327744)
[»] scaffold0026 (1 HSPs)
scaffold0026 (54-134)||(67611-67691)
[»] scaffold0472 (1 HSPs)
scaffold0472 (54-203)||(3783-3932)
[»] scaffold0912 (1 HSPs)
scaffold0912 (52-96)||(2440-2484)
[»] scaffold0418 (1 HSPs)
scaffold0418 (54-204)||(8135-8285)
[»] scaffold0131 (1 HSPs)
scaffold0131 (124-204)||(4015-4095)
[»] scaffold0007 (1 HSPs)
scaffold0007 (52-96)||(182644-182688)
[»] scaffold0024 (1 HSPs)
scaffold0024 (65-136)||(86728-86799)
[»] scaffold0179 (2 HSPs)
scaffold0179 (54-96)||(8063-8105)
scaffold0179 (54-96)||(12997-13039)
[»] scaffold0308 (2 HSPs)
scaffold0308 (160-224)||(17782-17846)
scaffold0308 (52-96)||(17674-17718)
[»] scaffold0309 (1 HSPs)
scaffold0309 (98-208)||(740-850)
[»] scaffold0225 (1 HSPs)
scaffold0225 (112-194)||(5553-5635)
[»] scaffold0057 (1 HSPs)
scaffold0057 (93-134)||(570-611)
[»] scaffold0112 (1 HSPs)
scaffold0112 (52-96)||(15217-15261)


Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 24 - 268
Target Start/End: Complemental strand, 52250763 - 52250520
Alignment:
Q  24 taacccgtcgctaataatagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaac 123  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52250763 taacccgtccctaatattagcgatttctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaac 52250664  T
Q  124 accctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctc 223  Q
    ||||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  52250663 accctataccataaacta-ccctctccaccaacaaacgccaacaccatttccctaacaacgcaacattaaactccctcaacctccgcacacccaaccctc 52250565  T
Q  224 cgacctccctccgagaacaaatagtggaccagctgacccaggaca 268  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  52250564 cgacctccctccaagaacaaatagtgggccagctgacccaggaca 52250520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 48930244 - 48930466
Alignment:
Q  41 tagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaact 140  Q
    ||||||| |||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  48930244 tagcgatttctcaccaccacgcagaaccactccagcccccaacctccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaact 48930343  T
Q  141 acccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaa 240  Q
    |  |||||| | |||||  | |||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||| | ||||| ||| |||    
T  48930344 attcctctctaccaacagccgccaacaccatttacctaacaatgcaatattaaactccctcaacctccgcacccccaaacctccaaactcccgccgtgaa 48930443  T
Q  241 caaatagtggaccagctgaccca 263  Q
    |||||||||| ||| || |||||    
T  48930444 caaatagtggtccaactaaccca 48930466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 46 - 263
Target Start/End: Original strand, 7164023 - 7164230
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||          |||||||||||| |||||||| || ||||||| ||    
T  7164023 atctctcgccaccaagaagaaacactccggcccccaacctctaacctcccatcct----------tctcgccaccaaaaccctatatcataaactactcc 7164112  T
Q  146 tctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaacaaat 245  Q
    |||||| ||| |||| ||||||||||||  | ||||| |||  |||||||||||||||||||||||| ||||||||| | |||||| |||||||||||||    
T  7164113 tctccaccaataaacgccaacaccatttttccaacaacgcatcattaaactccctcaacctccgcacccccaacccttcaacctccatccgagaacaaat 7164212  T
Q  246 agtggaccagctgaccca 263  Q
    ||||| ||| ||||||||    
T  7164213 agtggtccaactgaccca 7164230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 53 - 199
Target Start/End: Original strand, 6825352 - 6825498
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccat 152  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| |||||| |     
T  6825352 gccaccgagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccataccgcgccaccaacaccctataccataaactactcctctcaac 6825451  T
Q  153 caacaaacaccaacaccatttccctaacaaagcaatattaaactccc 199  Q
    |||||||| |||||||||||| ||||| || ||||||||||||||||    
T  6825452 caacaaacgccaacaccatttgcctaataacgcaatattaaactccc 6825498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 44888435 - 44888599
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| |||||| ||||||| ||| ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||| | || |      
T  44888435 ccaccacgaagaaacactccgaccctcaaccaccaacctcccatcctcctcaccataacgcgccaccaacaccctataccacatactacccttatcaact 44888534  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    || || | |||||||||||| ||||||| || || |||||||||||||| ||||| ||| |||||    
T  44888535 aataacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 44888599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 31675462 - 31675612
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||| |||  |||||||||||| ||||||||||||||  ||||||||||||||||| |||||| |||||||||||| |||| ||| || |||| |    
T  31675462 ccaccaagatgaagtactccggccccctacctccaacctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccacc 31675561  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||  | |||||||||||| ||||||||||||   |||||||||||||||    
T  31675562 aacattcgccaacaccatttacctaacaaagcatggttaaactccctcaac 31675612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 56 - 204
Target Start/End: Complemental strand, 31920958 - 31920810
Alignment:
Q  56 accaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaa 155  Q
    ||||||| |||  |||||||||||| ||||||||||||||  ||||||||||||||||| |||||| |||||||||||| |||| ||| || |||| |||    
T  31920958 accaagatgaagtactccggccccctacctccaacctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaa 31920859  T
Q  156 caaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||  | |||||||||||| ||||||||||||   |||||||||||||||    
T  31920858 cattcgccaacaccatttacctaacaaagcatggttaaactccctcaac 31920810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 19875774 - 19875893
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||| ||  |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| || | ||| || || |||    
T  19875774 ccaccaagatgatacactccggcccccaacctccaacctccttgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatctatc 19875873  T
Q  154 aacaaacaccaacaccattt 173  Q
    ||||| | ||||||||||||    
T  19875874 aacaaccgccaacaccattt 19875893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 12341864 - 12341694
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||| | ||||||||||||| ||||||| |  ||||||||| | ||||| || |||| ||||||||||  ||||||||  ||||| || |      
T  12341864 ccaccacgaagagcaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaact 12341765  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||  | ||||||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||    
T  12341764 aacagccgccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctcc 12341694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 962772 - 962601
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||| |||| |||||| |||||| ||||||| |  |||||| || ||||||| || ||||| |||||||||  |||||| | | | ||||| |      
T  962772 ccaccaagatgaacaactccgacccccatcctccaaaccaccatccgccccaccatacctagccactaacaccctacgccacaacccatctctctctact 962673  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccg 225  Q
    ||||| | |||||||||||| ||||||||||||||||||||||||||||| ||||  ||||||| |||||||    
T  962672 aacaacctccaacaccattttcctaacaaagcaatattaaactccctcaaactcctaacacccatccctccg 962601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 2364808 - 2364978
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | |||||||||      
T  2364808 ccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaat 2364907  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||||||||| ||||||||||||||||||   || |||||||||||    
T  2364908 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 2364978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 10323180 - 10323010
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||  ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | ||||||||| |    
T  10323180 ccaccacgaagaataactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaac 10323081  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||||||||| ||||||||||||| ||||   || |||||||||||    
T  10323080 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcagcctcttaacccccaaccctcc 10323010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 46190032 - 46190169
Alignment:
Q  63 agaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacac 162  Q
    |||| |||||||||||||||||||||||| | || ||||||||||||| ||||||||||| ||||| ||||||||||  ||  | |||| |||||| | |    
T  46190032 agaaacactccggcccccaacctccaaccgctcagcctcctcaccatacctcgccaccaataccctgtaccacaaacctcctttatccaccaacaaccgc 46190131  T
Q  163 caacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||| || || | ||||||||||| |||||| |||||    
T  46190132 caacatcactttcttaacaaagcaagattaaattccct 46190169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 222
Target Start/End: Original strand, 16179470 - 16179646
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |  ||| | ||  ||||||| |||||||| |||||| ||  |||||| |   | |    
T  16179470 atctcccgccaccaagaagaacaactccggcccccatcctccaaacctccaccgtctacaccatacctcgccactaacaccttacgccacaacccttcac 16179569  T
Q  146 tctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccct 222  Q
    |||| |  ||||| | ||||||||||||||| |||||||| | ||||||||||||||||||||  || |||||||||    
T  16179570 tctctactaacaacctccaacaccatttccccaacaaagcgacattaaactccctcaacctcctaactcccaaccct 16179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 8130482 - 8130565
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    ||||||| |||||||||||||||||||||||||||||||||||||   | ||||||| || || ||||||||||||||||||||    
T  8130482 ccaccaaaaagaaccactccggcccccaacctccaacctcccatcacgcacaccatacctagcaaccaacaccctataccacaa 8130565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 55367141 - 55367308
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| | ||| ||||||||||||| |||||||||||| |  ||||||||||||||||||| | ||| ||| |||||||||| | ||| || || |      
T  55367141 ccaccaaaaggaatcactccggccccctacctccaacctctctgcctcctcaccatatctcgctaacaaaaccttataccacaacccacctctatcaact 55367240  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccc 221  Q
    ||||  | |||||||||||| |||||||| |||| |||||| ||| ||||| ||| ||| ||||||||    
T  55367241 aacatcctccaacaccattttcctaacaacgcaagattaaattccttcaacttcctcacccccaaccc 55367308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 53941842 - 53941980
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||| ||||||||||||| ||| ||||||||||| ||||||||||||| | ||||||||||||| ||||||| || |   | || |||| |||||  |     
T  53941842 aagaatcactccggccccctaccaccaacctcccagcctcctcaccataccgcgccaccaacaccttataccagaacccctctctatccaccaacatcct 53941941  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    |||||||||||| ||||| ||||||  ||||||||||||    
T  53941942 ccaacaccattttcctaataaagcataattaaactccct 53941980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 3141374 - 3141551
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||| ||||||||||| |||| | ||||||||||| |||||||    |||||| || ||||||| || ||||| |||||||||  |||||| | | | |    
T  3141374 atctcccgccaccaagatgaacaattccggcccccatcctccaaatcaccatccgccgcaccatacctagccactaacaccctacgccacaacccatctc 3141473  T
Q  146 tctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctc 223  Q
    |||| |  ||||| | |||||||||||| |||||||||||| | |||||||||||||| ||||  ||||||| |||||    
T  3141474 tctctactaacaacctccaacaccattttcctaacaaagcagtgttaaactccctcaatctcctaacacccatccctc 3141551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 31547902 - 31548073
Alignment:
Q  54 ccaccaagaagaaccactccggccccc-aacctccaacctcccatcctcctcaccatatctcgccaccaacaccct------ataccacaaactacccct 146  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||| | ||| |||||||||||      |||||||| || |||| |    
T  31547902 ccaccacgaagaaacactccggccccccaaccaccaacctcccatcctcctcaccataacgcgctaccaacaccctatagccataccacataccaccctt 31548001  T
Q  147 ctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
     || |  || || | |||||||||||| ||||||| || || |||||||||||||| ||||| ||| |||||    
T  31548002 atcaactaataacctccaacaccattttcctaacagagaaacattaaactccctcatcctcctcacccccaa 31548073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 25024459 - 25024368
Alignment:
Q  48 ctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaac 139  Q
    ||||| ||||||| |||||| |||||| ||||||||| ||||||||||  |||||||||||||||| ||  |||||||||||||||| ||||    
T  25024459 ctctctccaccaataagaacaactccgacccccaaccgccaacctccctgcctcctcaccatatctagcttccaacaccctataccaaaaac 25024368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 19891208 - 19891378
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||| ||||||||| ||||||| |  |||||  || ||||||| || |||||||||||||||  |||||||| | |||| || |      
T  19891208 ccaccacgaagaacaacttcggcccccatcctccaaaccaccatctgccacaccatacctagccaccaacaccctacgccacaaaccaaccctatcaact 19891307  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||||||||||  ||||| ||||  |||||||| ||||||||||  ||||||| ||||||    
T  19891308 aacaatcgccaacaccatttcctcaacaatgcaaagttaaactctctcaacctcctaacacccatccctcc 19891378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 19919838 - 19919668
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |   |||||||| ||||||| || ||||| ||||||     |||||||  | |||||||||      
T  19919838 ccaccacgaagaacaactccggcccccatcctccaaaccgtcatcctccacaccatacctagccactaacacctgtctccacaaagcatccctctccaat 19919739  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||| ||||| ||||||||||||||||||   || |||||||||||    
T  19919738 aacaacctccaacaccatttgcccaacaaggcaatgttaaactccctcaacctcttaacccccaaccctcc 19919668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 35503056 - 35502975
Alignment:
Q  119 ccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||||||||| ||||||||||  || ||||||||||||| | ||||||||| ||||| ||||||||| |||||||||||||    
T  35503056 ccaacaccctaaaccacaaactctccttctccatcaacaaccgccaacaccacttcccaaacaaagcactattaaactccct 35502975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 6176079 - 6175923
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||| ||||||||||||||||||||||||| ||| |    || ||||| || || || || |||||||||||||||| ||| || |||| || ||  |     
T  6176079 aagaaacactccggcccccaacctccaacctgccacctaattcgccatacctggcgactaaaaccctataccacaaaccacctctgtccaccagcatccg 6175980  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    |||||||||||| ||||||||||| | |||||||||| ||||  ||||||| |||||    
T  6175979 ccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcacccccaa 6175923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 22734322 - 22734186
Alignment:
Q  64 gaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacacc 163  Q
    |||| ||||||||||||| |||||||||| |||| | || |||||||||  | || ||||||||||||| ||| |||||| || || |  |||||  |||    
T  22734322 gaacaactccggcccccatcctccaacctaccatgcaccgcaccatatcgtgtcaacaacaccctatacaacagactacctctatcgactaacaactacc 22734223  T
Q  164 aacaccatttccctaacaaagcaatattaaactccct 200  Q
    |||||||||| ||||  |||||||||||||| |||||    
T  22734222 aacaccatttacctagtaaagcaatattaaattccct 22734186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 14864074 - 14863904
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||||||||| |||||||||||| ||||||||||||||| || |||| ||||| |  || || |  || |||||||| ||||   |  | || | |    
T  14864074 ccaccaagaagaacaactccggccccccacctccaacctcccacccacctcgccataacaggcgacaagaacactataccataaacctactttatcgacc 14863975  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||  | |||||||||||| |||||||| |||| ||||||||||||||| ||||  || |||||||||||    
T  14863974 aacatcctccaacaccatttacctaacaatgcaaaattaaactccctcaatctcctaacccccaaccctcc 14863904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 21740132 - 21739962
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||||||||| |||||||||||||||||||||||||||| |  | || ||||| |  || || |  || | |||||| ||||   | || || | |    
T  21740132 ccaccaagaagaacaactccggcccccaacctccaacctcccacctacttcgccataacgggcgactagaacacaataccataaacctactctatctacc 21740033  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||  | |||||||||||| ||||||||||||| ||||||||||||||| ||||  || |||||||||||    
T  21740032 aacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatctccttacccccaaccctcc 21739962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 34332424 - 34332254
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||| ||||||| ||||||| |  |||||| || ||||||| || ||||| |||||| |   |||||||    |||||||||      
T  34332424 ccaccacgaagaacaactcccgcccccatcctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaagcctccctctccaat 34332325  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||||||||| |||||||| |||||||||   || |||||||||||    
T  34332324 aacaaccgccaacaccatttacccaacaaagcaatgttaaactctctcaacctcgtaacccccaaccctcc 34332254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 38456723 - 38456829
Alignment:
Q  94 ccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaa 193  Q
    ||||||||||| ||||| | ||||  |||||||||||||||||||||| |||| |||| |||  | | ||||| ||| || ||||| |||||||||||||    
T  38456723 ccatcctcctcgccataccgcgccgacaacaccctataccacaaactatccctatccaccaaacacctccaaccccacttgcctaataaagcaatattaa 38456822  T
Q  194 actccct 200  Q
    |||||||    
T  38456823 actccct 38456829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 40513319 - 40513193
Alignment:
Q  68 cactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaaca 167  Q
    |||||| ||||||||||||||||| |||| ||  ||||||||| |  || ||||  ||||||||||| |||| ||| || |||| |||||  | ||||||    
T  40513319 cactcctgcccccaacctccaaccgcccagccgtctcaccataccgagctaccaggaccctataccataaaccacctctatccaccaacatccgccaaca 40513220  T
Q  168 ccatttccctaacaaagcaatattaaa 194  Q
    |||||| |||||||||||| |||||||    
T  40513219 ccatttacctaacaaagcactattaaa 40513193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 224
Target Start/End: Complemental strand, 48569646 - 48569478
Alignment:
Q  56 accaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaa 155  Q
    |||| |||||||  || ||||||||| ||||||| |  |||||| || ||||||| || |||||||||||||||  |||||| | | | || || |  ||    
T  48569646 accacgaagaacagcttcggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaacccatctctatcaactaa 48569547  T
Q  156 caaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||| | ||||||||||||| ||| ||||||||| |||||||| ||||| ||||  ||||||| ||||||    
T  48569546 caaccgccaacaccatttctctagcaaagcaatgttaaactctctcaatctcctaacacccagccctcc 48569478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 2426895 - 2426821
Alignment:
Q  48 ctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaa 122  Q
    ||||| |||||||| |||| ||||||| |||||||||||||||| |||| || |||||||||| || ||||||||    
T  2426895 ctctctccaccaagtagaaacactccgacccccaacctccaaccgcccagccacctcaccataccttgccaccaa 2426821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 18381590 - 18381669
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||  |||| ||||||| ||||| || |||||||| |||||||| |||||||||||||||||||| |||| ||||||    
T  18381590 ccaccaaatagaaacactccg-ccccctacatccaaccttccatcctcgtcaccatatctcgccaccaaaacccaatacca 18381669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 45967921 - 45968028
Alignment:
Q  93 cccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatatta 192  Q
    |||||||||| ||||||| |  |||| |||||| ||||||||||| ||| |||| |||| |  ||| | ||||||||| |||| ||| |||||||| |||    
T  45967921 cccatcctccacaccataacgtgccaacaacactctataccacaacctatccctatccaccggcaacctccaacaccacttccttaataaagcaatgtta 45968020  T
Q  193 aactccct 200  Q
    ||||||||    
T  45968021 aactccct 45968028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 10868242 - 10868288
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctcc 208  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  10868242 ccaacaccatttacctaacaaagcaaaattaaactccctcaatctcc 10868288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 14307753 - 14307807
Alignment:
Q  68 cactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaa 122  Q
    ||||||||||||||| |||||| |||||  |||||||||||||||||||| ||||    
T  14307753 cactccggcccccaaactccaatctccctgcctcctcaccatatctcgccgccaa 14307807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 16672494 - 16672449
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcc 99  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  16672494 ccaccaagaagaacctctccggcccccaaccgccaaccttccatcc 16672449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 18650060 - 18649956
Alignment:
Q  94 ccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaa 193  Q
    ||||||||||||||||| || ||   |||||||||| |||| |||||  || |||||| |||||| | |||||||||||||| ||  | | |||||||||    
T  18650060 ccatcctcctcaccatagctagctgacaacaccctaaaccataaactctccttctccaccaacaaccgccaacaccatttccttagaagaacaatattaa 18649961  T
Q  194 actcc 198  Q
    |||||    
T  18649960 actcc 18649956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 24926298 - 24926255
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||    
T  24926298 gccaccaagtagaaccactccggcgaccaacctccaacctccca 24926255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 30166934 - 30166803
Alignment:
Q  73 cggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatt 172  Q
    |||||||||||||||||||| ||| |    || ||||| || || || || || ||||||||||||| ||| || || | |||||  | |||||||||||    
T  30166934 cggcccccaacctccaacctgccacctaattcgccatacctggcaactaagacactataccacaaaccacctctgtcaaccaacatccgccaacaccatt 30166835  T
Q  173 tccctaacaaagcaatattaaactccctcaac 204  Q
    | |||||||||||| ||||||| ||| |||||    
T  30166834 tacctaacaaagcactattaaattccttcaac 30166803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 15481259 - 15481217
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    |||||||||||| ||||| |||||||||||||||||| |||||    
T  15481259 ccaacaccatttacctaataaagcaatattaaactccttcaac 15481217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 29309955 - 29310097
Alignment:
Q  70 ctccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacacc 169  Q
    ||||||||||||||||||||||| ||| |    ||  |||| || || || || |||||||||||||||| |||  | |||| |||||  | ||||||||    
T  29309955 ctccggcccccaacctccaacctgccacctaattcggcatacctggcgactaaaaccctataccacaaaccacctttgtccaccaacatccgccaacacc 29310054  T
Q  170 atttccctaacaaagcaatattaaactccctcaacctccgcac 212  Q
    |||| |||||||| || | |||||||||| ||||  |||||||    
T  29310055 attttcctaacaatgctaaattaaactccttcaatttccgcac 29310097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 35537299 - 35537353
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcacca 108  Q
    ||||||| ||||| |||||||||||||||||||||| ||||   |||||||||||    
T  35537299 ccaccaataagaatcactccggcccccaacctccaatctccttgcctcctcacca 35537353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 43121276 - 43121238
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacct 92  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  43121276 ccaccaagaagaacaactccggcccccaacctcctacct 43121238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 50544759 - 50544797
Alignment:
Q  58 caagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  50544759 caagaagaacaactccggcccccgacctccaacctccca 50544797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 8943875 - 8943914
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacct 92  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  8943875 cgccaccaagaagaaccactctgg-ccccaacctccaacct 8943914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 18689480 - 18689376
Alignment:
Q  94 ccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaa 193  Q
    |||||||||||| |||| || ||   |||||||||| |||| |||||  || |||||| |||||| | |||||||||||||| ||  | | |||||||||    
T  18689480 ccatcctcctcagcatacctagctgacaacaccctaaaccataaactctccttctccaccaacaaccgccaacaccatttccttagaagaacaatattaa 18689381  T
Q  194 actcc 198  Q
    |||||    
T  18689380 actcc 18689376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 36709439 - 36709483
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||    
T  36709439 cgccaccacaaagaaacactccggccccccacctccaacctccca 36709483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 43284850 - 43284806
Alignment:
Q  164 aacaccatttccctaacaaagcaatattaaactccctcaacctcc 208  Q
    |||||||||||||||| | ||||||||||||||| ||||| ||||    
T  43284850 aacaccatttccctaaaatagcaatattaaactctctcaatctcc 43284806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 45684705 - 45684749
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||    
T  45684705 cgccaccacaaagaaacactccggccccccacctccaacctccca 45684749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 53504729 - 53504697
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaa 194  Q
    ||||||||||||||||||||||| |||||||||    
T  53504729 ccaacaccatttccctaacaaagaaatattaaa 53504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 24 - 263
Target Start/End: Original strand, 43310760 - 43310999
Alignment:
Q  24 taacccgtcgctaataatagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaac 123  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43310760 taacccgtccctaatattagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaac 43310859  T
Q  124 accctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctc 223  Q
    ||||||||||||||||||| |||||||| ||| |||| |||||||||||| |||||||| |||| ||||||||||||||||||||||| |||||| ||||    
T  43310860 accctataccacaaactactcctctccaccaataaacgccaacaccatttgcctaacaacgcaacattaaactccctcaacctccgcatacccaatcctc 43310959  T
Q  224 cgacctccctccgagaacaaatagtggaccagctgaccca 263  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  43310960 cgacctccctccgagaacaaatagtggtccaactgaccca 43310999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 24 - 263
Target Start/End: Original strand, 26146716 - 26146955
Alignment:
Q  24 taacccgtcgctaataatagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaac 123  Q
    |||||| || |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26146716 taacccatccctaatattagcgatctctcgccaccaagaataaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaac 26146815  T
Q  124 accctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctc 223  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||| |||||||| |||| ||||||||||||||| |||||||||||||| ||||    
T  26146816 accctataccacaaactactcctctccaccaacaaacgccaacaccatttgcctaacaacgcaacattaaactccctcaaactccgcacacccaaacctc 26146915  T
Q  224 cgacctccctccgagaacaaatagtggaccagctgaccca 263  Q
    | ||||||||||| ||||||||||||| ||| | ||||||    
T  26146916 caacctccctccgcgaacaaatagtggtccaacggaccca 26146955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 10689056 - 10689240
Alignment:
Q  24 taacccgtcgctaataatagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaac 123  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||| | |||| |||||||||||| ||||||||    
T  10689056 taacccgtccctaatattagcgatctctcgtcaccaagaagaaccactccggcccc-aacctccaacctcctagcctcatcaccatatctcaccaccaac 10689154  T
Q  124 accctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccg 209  Q
    ||||||||||| ||||||| |||||||| ||| |||| ||||||||| || |||||||| |||| |||||||||||||||||||||    
T  10689155 accctataccataaactactcctctccaccaataaacgccaacaccactttcctaacaacgcaacattaaactccctcaacctccg 10689240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 224
Target Start/End: Original strand, 14440262 - 14440445
Alignment:
Q  41 tagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaact 140  Q
    |||| ||||| | |||||| ||||||| ||||||||||||| ||||||| |  |||||| ||  |||||| || |||| |||||||||| |||||||||     
T  14440262 tagctatctccctccaccacgaagaacaactccggcccccatcctccaaaccaccatccgccataccatacctagccaacaacaccctacaccacaaacc 14440361  T
Q  141 acccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||| || |  ||||||| ||||||||||||| | |||| |||||| |||||||| ||||||||||  ||||||||||||||    
T  14440362 acccctatcaactaacaaacgccaacaccatttcaccaacagagcaatgttaaactctctcaacctcctaacacccaaccctcc 14440445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 41 - 263
Target Start/End: Complemental strand, 43722648 - 43722443
Alignment:
Q  41 tagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaact 140  Q
    ||||||| |||| ||||||||||||||||||| |||||||||||||| |||       |||||||||||          ||| ||||||||||| |||||    
T  43722648 tagcgatttctctccaccaagaagaaccactctggcccccaacctcccacc-------ctcctcaccat----------caaaaccctataccataaact 43722566  T
Q  141 acccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaa 240  Q
    || |||||| | ||| || | |||||||||||| |||||||| |||| |||||||||||||| | || |||| ||||| ||||| | ||||  |||||||    
T  43722565 actcctctctaccaataaccgccaacaccatttacctaacaacgcaacattaaactccctcatcttctgcacccccaaacctccaaactcctgccgagaa 43722466  T
Q  241 caaatagtggaccagctgaccca 263  Q
    |||||||||| ||| || |||||    
T  43722465 caaatagtggtccaactaaccca 43722443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 28253251 - 28253421
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||||||||| ||||||||||||| ||||||| |  |||||| || ||||||| || |||  ||||||| ||  ||| || |   |||||||||      
T  28253251 ccaccaagaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccctcaacaccttacgccataacccttccctctccact 28253350  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||| |||||||||||| |||||||  || | ||||||||| ||||||||||  ||||||||||||||    
T  28253351 aacaaacgccaacaccattttcctaacagggctaaattaaactctctcaacctccttacacccaaccctcc 28253421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 12646091 - 12646222
Alignment:
Q  93 cccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatatta 192  Q
    |||||||||| |||| || || ||||||||||||||||||||||| | | | || || |  ||||| | |||||||||||| ||||||||| |||  |||    
T  12646091 cccatcctccacaccttacctagccaccaacaccctataccacaatccatctctatctactaacaacctccaacaccattttcctaacaaaacaaagtta 12646190  T
Q  193 aactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| ||||||||||  ||||||||||||||    
T  12646191 aactctctcaacctcctaacacccaaccctcc 12646222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 6823956 - 6824022
Alignment:
Q  68 cactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||| |||| |||||||||||    
T  6823956 cactccggcccccaacctccaacctccctgcctcctcaacatatctcgccgccaaaaccctatacca 6824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 11196880 - 11197052
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||| |   ||||||||| | ||| ||||  ||||||||||| || |  || || ||||    
T  11196880 cgccaccaagatgaaacactccggcccccaacctccaaccgcccaactgtctcaccataccgcgctaccagaaccctataccataacccgcctctatcca 11196979  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
     || ||  | |||||||||||| |||||||||||  ||||||| |||  ||||||||  || |||||||||||    
T  11196980 ccatcattcgccaacaccatttgcctaacaaagcgctattaaattcctgcaacctccttacccccaaccctcc 11197052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 15018206 - 15018358
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    | || ||||| |  || || || || |||||||| || | |||||| ||||    
T  15018206 cgccaccaagaagaacaacttcggcccccaacctccaacctcccacatacttcgccataacgagcgactaaaactctataccaaaatccacccctatcca 15018305  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
       |||| | |||||||||||||||||| || ||||||||||||||| |||||    
T  15018306 ctgacaacctccaacaccatttccctaataaggcaatattaaactccttcaac 15018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 26894213 - 26894057
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||| ||||||||||||||||||||||||| ||| |    || ||||| || || || || |||||||||||||||| |||  | |||| |||||  |     
T  26894213 aagaaacactccggcccccaacctccaacctgccacctatttcgccatacctggcgactaaaaccctataccacaaaccacctatgtccaccaacatccg 26894114  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    |||||||||||| ||||||||||  | |||||||||| ||||| ||||||| |||||    
T  26894113 ccaacaccattttcctaacaaagttaaattaaactccttcaacttccgcacccccaa 26894057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 26899652 - 26899496
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||| ||||||||||||||||||||||||| ||| |    || ||||| || || || || |||||||||||||||| |||  | |||| |||||  |     
T  26899652 aagaaacactccggcccccaacctccaacctgccacctatttcgccatacctggcgactaaaaccctataccacaaaccacctatgtccaccaacatccg 26899553  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    |||||||||||| ||||||||||  | |||||||||| ||||| ||||||| |||||    
T  26899552 ccaacaccattttcctaacaaagttaaattaaactccttcaacttccgcacccccaa 26899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 37445624 - 37445792
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||||||||  |||||| ||||||| || |||||||||||||||  ||| || | | | || || |      
T  37445624 ccaccacgaagaacaactccggcccccatcctccaacctcctgtcctccgcaccatacctagccaccaacaccctacgccagaacccatcactatcaact 37445723  T
Q  154 aacaaacaccaacaccattt-ccctaacaaagcaatattaaactccctcaacctccgcacacccaaccc 221  Q
    |||| || |||||||||||| ||| ||||||||  | ||||||||||||||| |||  || ||||||||    
T  37445724 aacagacgccaacaccatttcccccaacaaagcggtgttaaactccctcaacttcctaacccccaaccc 37445792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 13550700 - 13550812
Alignment:
Q  106 ccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacc 205  Q
    |||||||| || || || |||||||||||||||  ||| || || | |||||| | ||||||||||||||||||||| || |||||||||||| |||| |    
T  13550700 ccatatctggcaactaaaaccctataccacaaatcacctctatcaaccaacaacctccaacaccatttccctaacaatgctatattaaactccttcaatc 13550799  T
Q  206 tccgcacacccaa 218  Q
    ||| ||| |||||    
T  13550800 tcctcacccccaa 13550812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 13551153 - 13551265
Alignment:
Q  106 ccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacc 205  Q
    |||||||| || || || |||||||||||||||  ||| || || | |||||| | ||||||||||||||||||||| || |||||||||||| |||| |    
T  13551153 ccatatctggcaactaaaaccctataccacaaatcacctctatcaaccaacaacctccaacaccatttccctaacaatgctatattaaactccttcaatc 13551252  T
Q  206 tccgcacacccaa 218  Q
    ||| ||| |||||    
T  13551253 tcctcacccccaa 13551265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 2207431 - 2207348
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    ||||||| ||||||||| |||||||||| ||||||||||||| | |  | |||||||||  || ||||||||||||||||||||    
T  2207431 ccaccaaaaagaaccaccccggcccccatcctccaacctcccgttcctcacaccatatcgagcgaccaacaccctataccacaa 2207348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 13416202 - 13416285
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||   | ||||||| || || |||||||||| |||||||||    
T  13416202 ccaccaaatagaaccactccggcccccatcctccaacctcccatcacgcacaccatacctagcaaccaacacccgataccacaa 13416285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 11233991 - 11233929
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||| ||||||||||||| |||||||||||||||| |||  || |||||||||||    
T  11233991 ccaacaccatttacctaacaaagcaaaattaaactccctcaacttcctaacccccaaccctcc 11233929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 1380613 - 1380654
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccc 95  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  1380613 ccaccaagaagaacaactccggcccccaacctccaacctccc 1380654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 222
Target Start/End: Complemental strand, 9668615 - 9668447
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| |||||| |||||||||||||||||||||||||||  |  |||| ||||| |  || || |  || ||||||||||| |   | || || | |    
T  9668615 ccaccaataagaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaccctactctatctacc 9668516  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccct 222  Q
    ||||  | ||||||| |||| |||||||||||||  |||||||||||||||||||  || |||||||||    
T  9668515 aacatcctccaacactatttacctaacaaagcaaagttaaactccctcaacctcctaacccccaaccct 9668447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 40430003 - 40430070
Alignment:
Q  112 ctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaa 179  Q
    |||||| ||||||||||| ||||||||||| |||| ||||||||||  | ||||||||| ||||||||    
T  40430003 ctcgccgccaacaccctaaaccacaaactatccctatccatcaacacccgccaacaccacttccctaa 40430070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 6727387 - 6727343
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatc 98  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||    
T  6727387 ccaccaaatagaaccactccggcccccatcctccaacctcccatc 6727343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 21579625 - 21579705
Alignment:
Q  120 caacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    |||||||| |||||||||  || |||| |||| || ||| | ||||||||| |||||||| |||||| |||||||||||||    
T  21579625 caacacccgataccacaagttatccctatccaccagcaacctccaacaccacttccctaataaagcactattaaactccct 21579705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 35488366 - 35488410
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||    
T  35488366 cgccaccacgaagaaccacttcggccccccacctccaacctccca 35488410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 204
Target Start/End: Original strand, 45422065 - 45422201
Alignment:
Q  68 cactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaaca 167  Q
    ||||||| ||||||||||||||||| ||| |    || ||||| || || || || || ||||||||||||| |||  | |||| |||||  | ||||||    
T  45422065 cactccgacccccaacctccaacctgccacctaattcgccatacctggcaactaagacactataccacaaaccacctttgtccaccaacatccgccaaca 45422164  T
Q  168 ccatttccctaacaaagcaatattaaactccctcaac 204  Q
    |||||| |||||||||||| ||||||| ||| |||||    
T  45422165 ccatttacctaacaaagcactattaaattccttcaac 45422201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 10689235 - 10689278
Alignment:
Q  220 cctccgacctccctccgagaacaaatagtggaccagctgaccca 263  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||    
T  10689235 cctccgacctccctccgagaataaatagtggtccaactgaccca 10689278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 22725050 - 22725007
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccc 95  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||    
T  22725050 cgccaccacgaagaacaactccggcccccatcctccaacctccc 22725007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 11234087 - 11234049
Alignment:
Q  55 caccaagaagaaccactccggcccccaacctccaacctc 93  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  11234087 caccaataagaacaactccggcccccaacctccaacctc 11234049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 33583928 - 33583866
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||| | ||||||||| ||||||||||||||||||  ||  || |||||||||||    
T  33583928 ccaacaccatttacttaacaaagctatattaaactccctcaactgccttacccccaaccctcc 33583866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 7301300 - 7301344
Alignment:
Q  160 caccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||||||||| || |||||||||||| |||||||||| ||||||    
T  7301300 caccaacaccagttacctaacaaagcactattaaactctctcaac 7301344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 11028395 - 11028439
Alignment:
Q  48 ctctcgccaccaagaagaaccactccggcccccaacctccaacct 92  Q
    ||||| |||||||||||||| |||| |||||||| ||||||||||    
T  11028395 ctctctccaccaagaagaacaactctggcccccatcctccaacct 11028439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 28400161 - 28400117
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||    
T  28400161 cgccaccacaaagaaacactccggccccccacctccaacctccca 28400117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 30504854 - 30504774
Alignment:
Q  120 caacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||||||||  ||| |||||  |||| |||  |||||||  ||||||| | |||||||||| ||||||||||||||||||    
T  30504854 caacaccctaatccataaactctccctatcctccaacaaatgccaacactacttccctaacagagcaatattaaactccct 30504774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 33583960 - 33583924
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaac 90  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  33583960 ccaccaagaagaaacactccgacccccaacctccaac 33583924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 4e-78; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 24 - 263
Target Start/End: Complemental strand, 25018957 - 25018718
Alignment:
Q  24 taacccgtcgctaataatagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaac 123  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||| |||||||||    
T  25018957 taacccgtccctaatattagcgatctctcgccaccaagaagaaccacttcgacccccaacctccaacctcccagcctcctcaccatatcttgccaccaac 25018858  T
Q  124 accctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctc 223  Q
    ||||||||||| || |||| ||||| || ||| |||| |||||||||||| | |||||| |||| |||||||||||||||||||| ||||||||  ||||    
T  25018857 accctataccataagctactcctcttcaccaataaacgccaacaccattttcttaacaacgcaacattaaactccctcaacctcctcacacccagacctc 25018758  T
Q  224 cgacctccctccgagaacaaatagtggaccagctgaccca 263  Q
    |||||||||||||||||||||||||||  || ||||||||    
T  25018757 cgacctccctccgagaacaaatagtggttcaactgaccca 25018718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 24 - 261
Target Start/End: Complemental strand, 41805382 - 41805161
Alignment:
Q  24 taacccgtcgctaataatagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaac 123  Q
    |||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||               |||||||||||||||||||||    
T  41805382 taacccatccctaatattagcgatctctcgccaccaagaagaaccactccggcccccaacctcc---------------tcaccatatctcgccaccaac 41805298  T
Q  124 accctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctc 223  Q
    ||||||||||| ||||||| |||||||| ||| |||| |||||||||||| |||||||| | || |||||||||||||||||||| ||||||||  ||||    
T  41805297 accctataccaaaaactactcctctccaccaataaacgccaacaccattttcctaacaacg-aacattaaactccctcaacctcctcacacccagacctc 41805199  T
Q  224 cgacctccctccgagaacaaatagtggaccagctgacc 261  Q
    ||| ||||||| ||||||||||||||| ||| ||||||    
T  41805198 cgaactccctctgagaacaaatagtggtccaactgacc 41805161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 39931205 - 39931035
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| |||||| ||||||||||||| ||||||||| |||||||||| ||||||| || ||||||||||||||| ||||||||  | | | |||||      
T  39931205 ccaccaacaagaacaactccggcccccatcctccaaccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 39931106  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||| |||||||||||| ||||||| ||||||||||| ||||||||||||||  || |||||||||||    
T  39931105 aacaaacgccaacaccatttacctaacagagcaatattaagctccctcaacctcctaacccccaaccctcc 39931035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 17056060 - 17056224
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||| | || |      
T  17056060 ccaccacgaagaaacactccggcccccaaccaccaacctcccatcctcctcaccataacgcgccaccaacaccctataccacatactacccttatcaact 17056159  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    || || | |||||||||||| ||||||| || || |||||||||||||| ||||| ||| |||||    
T  17056160 aataacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 17056224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 194
Target Start/End: Complemental strand, 27218731 - 27218591
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||| ||  ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| || | ||| || || |||    
T  27218731 ccaccaagatgatacactccggcccccaaccgccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaatccacctctatctatc 27218632  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaa 194  Q
    ||||| | |||||||||||| ||||||||||| | ||||||    
T  27218631 aacaaccgccaacaccatttacctaacaaagctaaattaaa 27218591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 22819318 - 22819162
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||| ||||||||||||||||| |||||||||  |||||||||||||| | ||| ||||||||||||||||||| ||||||| | || |  || || |     
T  22819318 aagaaacactccggcccccaaccgccaacctcctgtcctcctcaccataacgcgctaccaacaccctataccacatactacccttatcgactaataacct 22819219  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    ||||||||| || ||||||| || || |||||||||||||||||||| ||| |||||    
T  22819218 ccaacaccacttgcctaacagagaaacattaaactccctcaacctcctcacccccaa 22819162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 4937737 - 4937567
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | |||||||||      
T  4937737 ccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaat 4937638  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||||||||| ||||||||||||||||||   || |||||||||||    
T  4937637 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 4937567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 62 - 204
Target Start/End: Complemental strand, 19545003 - 19544861
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||||||  | | |||||||||||||||| || | | | || |||| |||||  |     
T  19545003 aagaaccactccggcccccaacctccaacctctctgcctcctcaccatatcgtgtcgccaacaccctataccaaaacccatctctatccaccaacatccg 19544904  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    |||||||||||| ||||| || ||| |||||||||||||||||    
T  19544903 ccaacaccatttgcctaataaggcactattaaactccctcaac 19544861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 17504160 - 17504088
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  17504160 aagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaacactcgatacca 17504088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 17549054 - 17549126
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  17549054 aagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaacactcgatacca 17549126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 31423135 - 31423303
Alignment:
Q  56 accaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaa 155  Q
    |||| ||||||| ||||||||||||| ||||||| |  |||||| || ||||||  || |||||||||||||||  |||||||| | |||| || |  ||    
T  31423135 accacgaagaacaactccggcccccatcctccaaaccaccatccgccacaccatgcctagccaccaacaccctacgccacaaaccatccctatcaactaa 31423234  T
Q  156 caaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||| | ||||||||||||||| ||||||||| | |||||||| ||||||||||  ||||||| ||||||    
T  31423235 caaccgccaacaccatttccccaacaaagcactgttaaactctctcaacctcctaacacccatccctcc 31423303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 23887615 - 23887764
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||  |||||||||| || ||| || |||| ||||||||||| ||   ||| || || | |    
T  23887615 ccaccaagaagaaacactccgacccccaacctccaacct-cctgcctcctcaccgtacctcaccgccaaaaccctataccagaactcacctctgtctacc 23887713  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    | ||  | |||||||||||| ||||||||||| ||||||||||||||||||    
T  23887714 agcatcctccaacaccattttcctaacaaagctatattaaactccctcaac 23887764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 23898791 - 23898940
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||  |||||||||| || ||| || |||| ||||||||||| ||   ||| || || | |    
T  23898791 ccaccaagaagaaacactccgacccccaacctccaacct-cctgcctcctcaccgtacctcaccgccaaaaccctataccagaactcacctctgtctacc 23898889  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    | ||  | |||||||||||| ||||||||||| ||||||||||||||||||    
T  23898890 agcatcctccaacaccattttcctaacaaagctatattaaactccctcaac 23898940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 235047 - 234877
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| || ||||||| || ||||| |||||| |   |||||||    | |||||||      
T  235047 ccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacctttcgccacaaagcttctctctccaat 234948  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| |||||||||||||| || |||||||||||||||||||| | |||||||   || |||||||||||    
T  234947 aacaaccaccaacaccatttacccaacaaagcaatattaaactctcgcaacctcgtaactcccaaccctcc 234877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 34104008 - 34104088
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    ||||||| |||||||||||| ||||||| ||||||||||||   |||||||||| || | |||||||||||||||||||||    
T  34104008 ccaccaacaagaaccactccagcccccatcctccaacctccttgcctcctcaccgtaacgcgccaccaacaccctatacca 34104088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 45993105 - 45993256
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||  | |||| ||||| |  || || || || |||||||| |||| |||||| ||||    
T  45993105 cgccaccaagaagaacaactccggcccc-aacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatcca 45993203  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
      ||||  | |||||||||||||||||  || |||| |||||||||| |||||    
T  45993204 ctaacatcctccaacaccatttccctagtaatgcaacattaaactccttcaac 45993256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 11341320 - 11341407
Alignment:
Q  47 tctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||| ||||||| | |||| |||||||||||| ||||||||||||||  ||||||||||||| || ||  ||||||||||||||||    
T  11341320 tctctctccaccaaaaggaacaactccggcccccgacctccaacctccctgcctcctcaccatacctagcagccaacaccctatacca 11341407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 45165168 - 45165085
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||    |||||||||| || |||||||||| |||||||||    
T  45165168 ccaccaaaaagaaccactccggcctccatcctccaacctcccatccctaacaccatatctagcaaccaacaccccataccacaa 45165085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 8752973 - 8752923
Alignment:
Q  86 ccaacctcccatcctcctcaccatatctcgccaccaacaccctataccaca 136  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  8752973 ccaacctcccagcctcctcaccatatctcgccaccagcaccctataccaca 8752923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 212
Target Start/End: Original strand, 13440592 - 13440742
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||| ||||||||||||||||||||||||| ||| |    || ||||| || || || || |||| ||||||||||| ||| || |||| |||||  |     
T  13440592 aagaaacactccggcccccaacctccaacctgccacctaattcgccatacctggcgactaaaacccgataccacaaaccacctctatccaccaacatccg 13440691  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcac 212  Q
    |||||||||||| ||||||||||| | |||||||||| ||||  |||||||    
T  13440692 ccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcac 13440742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 17721166 - 17721336
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| || ||||||| || |||||||||||| |   |||||||    || ||||||      
T  17721166 ccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacctttctccacaaagcttccttctccaat 17721265  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || |||||||| | ||||||||| |||||||||   || |||||||||||    
T  17721266 aacaaccgccaacaccatttacccaacaaagctaaattaaactctctcaacctcgtaacccccaaccctcc 17721336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 36364051 - 36364214
Alignment:
Q  58 caagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaaca 157  Q
    |||||||||| ||| |||||| || ||||||||     ||||||| |||| || || |||||||||||||||  || ||||| |   | |||||  ||||    
T  36364051 caagaagaacaacttcggccctcatcctccaactatttatcctccacaccttaactagccaccaacaccctacgccccaaaccattaccctccactaaca 36364150  T
Q  158 aacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccc 221  Q
    ||| |||||||||||| |  |||||||||||||||||||||||||| ||||  || ||||||||    
T  36364151 aacgccaacaccatttactcaacaaagcaatattaaactccctcaatctcctaacccccaaccc 36364214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 39658965 - 39658850
Alignment:
Q  86 ccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactaccc-ctctccatcaacaaacaccaacaccatttccctaacaaag 184  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||| | || |  ||| || |||| |||||  | |||||||||||||||||| ||||    
T  39658965 ccaacctcccagcctcctcaccataccgcgccaccaacaccctatactagaaccccccctctatccaccaacatcctccaacaccatttccctaataaag 39658866  T
Q  185 caatattaaactccct 200  Q
    ||  |||||| |||||    
T  39658865 cacaattaaattccct 39658850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 46626367 - 46626502
Alignment:
Q  68 cactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaaca 167  Q
    ||||||||||||||||||||||||| ||| |    || ||||| || || || || || ||||||||||||| ||| || |||| |||||  | ||||||    
T  46626367 cactccggcccccaacctccaacctgccacctaattcgccatacctggcaactaagacactataccacaaaccacctctgtccaacaacatccgccaaca 46626466  T
Q  168 ccatttccctaacaaagcaatattaaactccctcaa 203  Q
    |||||| |||||||||||| ||||||| ||| ||||    
T  46626467 ccatttacctaacaaagcactattaaattccttcaa 46626502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 11276857 - 11276687
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| || |||| ||||||| ||||| ||||||| |  |||||| || ||||||| || ||||| |||||| |   |||||||    |||||||||      
T  11276857 ccaccacgacgaacaactccgggccccatcctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaagcttccctctccaat 11276758  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || | ||||||||| ||||||||||||||||||   || |||||||||||    
T  11276757 aacaaccgccaacaccatttacccaccaaagcaatgttaaactccctcaacctcgtaacccccaaccctcc 11276687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 29968505 - 29968675
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| || |||| |||||||||| || ||||||| |  |||||| || | ||||| || ||||| |||||| |   |||||||    |||||||||      
T  29968505 ccaccacgacgaacaactccggcccgcatcctccaaacctccatccgccacgccatacctagccactaacacctttctccacaaagcttccctctccaat 29968604  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || |||||||||||||||||||||||||| |||   || |||||||||||    
T  29968605 aacaaccgccaacaccatttacccaacaaagcaatattaaactccctcaatctcgtaacccccaaccctcc 29968675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 207
Target Start/End: Original strand, 47877514 - 47877666
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||| | ||||||| |  |||||| || ||||||| || ||||||||||||     |||||||    |||||||||      
T  47877514 ccaccacgaagaacaactccggcccc-atcctccaaacctccatccgccacaccatacctagccaccaacacctgtcgccacaaagcttccctctccaat 47877612  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctc 207  Q
    ||||| | ||||||||||||  | |||||||||||||||||||| |||||||||    
T  47877613 aacaaccgccaacaccatttatccaacaaagcaatattaaactctctcaacctc 47877666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 20349495 - 20349574
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||  ||||||||||| ||||| | |||||||||||||  ||||||||||||| |  ||||||||||||||||||||    
T  20349495 ccaccaaagagaaccactcctgccccta-cctccaacctccctgcctcctcaccataccgagccaccaacaccctatacca 20349574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 33795968 - 33795924
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||    
T  33795968 cgccaccacgaagaaccactccggcccccaccctccaacctccca 33795924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 36227761 - 36227717
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||    
T  36227761 cgccaccaagaagaatcactccggccccccacctccaacctccca 36227717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 13553793 - 13553626
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||  ||||| |||||||||||||||||||||||||||  |  |||| ||||| |  || || |  || ||||||||||| |   | || || | |    
T  13553793 ccaccaatgagaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaccctactctatctacc 13553694  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccc 221  Q
    ||||  | ||||||||||||  |||||||||||| ||||||||||||||||||||  || ||||||||    
T  13553693 aacatcctccaacaccatttatctaacaaagcaaaattaaactccctcaacctcctaacccccaaccc 13553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 6336013 - 6335933
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||  |||||||||| |||||||| ||||||||||||||||   | ||||||| || || |||||||||| ||||||    
T  6336013 ccaccaaatagaaccactctggcccccatcctccaacctcccatcgcgcacaccatacctagcaaccaacacccgatacca 6335933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 9627318 - 9627254
Alignment:
Q  120 caacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaag 184  Q
    |||||||||| |||| |||||| |||||||||||||||  | ||||||||| |||||||| ||||    
T  9627318 caacaccctaaaccataaactatccctctccatcaacagcctccaacaccacttccctaataaag 9627254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 18671699 - 18671743
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||    
T  18671699 cgccaccatgaagaaacactccggccccccacctccaacctccca 18671743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 40681839 - 40681747
Alignment:
Q  108 atatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||||||||   ||||||||||||||||||||  || | || ||||||||   ||||||||| |||||||| || ||| |||||||||||||    
T  40681839 atatctcgccgataacaccctataccacaaactctccttttcaatcaacaactgccaacaccacttccctaataatgcactattaaactccct 40681747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 12308724 - 12308690
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctcca 88  Q
    ||||||| |||||||||||||||||||||||||||    
T  12308724 ccaccaataagaaccactccggcccccaacctcca 12308690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 34232230 - 34232268
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacct 92  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  34232230 ccaccaagaagaacaactccggcccccaacctcccacct 34232268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 27854001 - 27853928
Alignment:
Q  121 aacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaa 194  Q
    ||||||||| ||||||||||| | |||||| ||||||  | ||||||||| |||||||| ||||| | ||||||    
T  27854001 aacaccctaaaccacaaactatctctctccgtcaacaccctccaacaccacttccctaataaagctaaattaaa 27853928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 17856261 - 17856305
Alignment:
Q  48 ctctcgccaccaagaagaaccactccggcccccaacctccaacct 92  Q
    |||||||||||||||||||| ||||||| |||| |||||| ||||    
T  17856261 ctctcgccaccaagaagaacaactccggacccccacctcccacct 17856305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 18767937 - 18767981
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||    
T  18767937 cgccaccacaaagaaacactccggccccccacctccaacctccca 18767981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 23054548 - 23054500
Alignment:
Q  86 ccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    ||||||||||  |||||||||||| ||| ||| ||||||||||||||||    
T  23054548 ccaacctccctgcctcctcaccatgtctagccgccaacaccctatacca 23054500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 29375676 - 29375756
Alignment:
Q  120 caacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||||| || ||||||||||| ||| ||||| |||||  | ||||||||| |||||||  || || ||||||||||||||    
T  29375676 caacaccttaaaccacaaactatcccgctccaccaacatccgccaacaccacttccctagtaacgccatattaaactccct 29375756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 34457769 - 34457725
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||    
T  34457769 cgccaccacaaagaaacactccggccccccacctccaacctccca 34457725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 47 - 263
Target Start/End: Original strand, 55186 - 55405
Alignment:
Q  47 tctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccct 146  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| |||    
T  55186 tctcttgccaccaagaaaaatcactccggcccccaacctccaacctctcatcctcctcgccatatctcgccaccaacaccctataccataaactactcct 55285  T
Q  147 ctccatcaacaaacaccaacaccatttcc---ctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaacaa 243  Q
    ||||| ||| |||| |||||||||||| |   |||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  55286 ctccaccaataaacgccaacaccatttgcctgctaacaactcaacattaaactccctcaacctctgcacacccaaccctccgacctccctccgggaacaa 55385  T
Q  244 atagtggaccagctgaccca 263  Q
    ||||||| ||||||||||||    
T  55386 atagtggtccagctgaccca 55405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 47 - 263
Target Start/End: Complemental strand, 143448 - 143229
Alignment:
Q  47 tctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccct 146  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| |||    
T  143448 tctcttgccaccaagaaaaatcactccggcccccaacctccaacctctcatcctcctcgccatatctcgccaccaacaccctataccataaactactcct 143349  T
Q  147 ctccatcaacaaacaccaacaccatttcc---ctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaacaa 243  Q
    ||||| ||| |||| |||||||||||| |   |||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  143348 ctccaccaataaacgccaacaccatttgcctgctaacaactcaacattaaactccctcaacctctgcacacccaaccctccgacctccctccgggaacaa 143249  T
Q  244 atagtggaccagctgaccca 263  Q
    ||||||| ||||||||||||    
T  143248 atagtggtccagctgaccca 143229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 34 - 263
Target Start/End: Original strand, 28292 - 28514
Alignment:
Q  34 ctaataatagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacc 133  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||       ||||||||||||||| |||||||| |||||||||||||||||||    
T  28292 ctaatattagcgatctttcgccactaagaagaaccactccggcccccaa-------cctcccatcctcctcgccatatcttgccaccaacaccctatacc 28384  T
Q  134 acaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccct 233  Q
    ||||||||| |||||||| |||||||| |||||||||||| |||||||| |||  |||||||||||||||| ||||||||||||| ||||| ||||||||    
T  28385 acaaactactcctctccaccaacaaacgccaacaccatttgcctaacaacgcagcattaaactccctcaacttccgcacacccaaacctccaacctccct 28484  T
Q  234 ccgagaacaaatagtggaccagctgaccca 263  Q
    ||| ||||||||||||| ||||| ||||||    
T  28485 ccgtgaacaaatagtggtccagcggaccca 28514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 34 - 263
Target Start/End: Original strand, 12332366 - 12332588
Alignment:
Q  34 ctaataatagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacc 133  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  12332366 ctaatattagcgatctctcgccaccaagaagaaccactccggcccccaa-------cctcccatcctcctcaccatatctcgccaccaacaccctatacc 12332458  T
Q  134 acaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccct 233  Q
    | | ||||| ||||||||  || |||| |||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |  ||||||| ||||||    
T  12332459 aaagactacacctctccactaataaacgccaacaccatttgcctaacaacgcaatattaaactccctcaacctcctcacacctagacctccgaactccct 12332558  T
Q  234 ccgagaacaaatagtggaccagctgaccca 263  Q
    | ||||||||||||||| ||| ||||||||    
T  12332559 ctgagaacaaatagtggtccaactgaccca 12332588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 53 - 263
Target Start/End: Original strand, 36492911 - 36493121
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccat 152  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |     
T  36492911 gccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaactactcctctcaac 36493010  T
Q  153 caacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaacaaatagtggac 252  Q
    |||||||| |||||||||||| ||||| || |||| ||||||||||| |||||||||||| ||||| |||||   ||||||||||||| ||||||||| |    
T  36493011 caacaaacgccaacaccatttgcctaataacgcaacattaaactcccgcaacctccgcacccccaaacctccatactccctccgagaataaatagtggtc 36493110  T
Q  253 cagctgaccca 263  Q
    || || |||||    
T  36493111 caactaaccca 36493121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 29721519 - 29721352
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| ||||  ||||||||||||| |||||||||||||||  |||||||||||||||||||||||| |||||||||||||| | |||    || |      
T  29721519 ccaccaataagagacactccggccccctacctccaacctcccaggctcctcaccatatctcgccaccaaaaccctataccacaacccaccttgatcaact 29721420  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccc 221  Q
    ||||  | |||||||||||| |||||||| |||| |||||||||| ||||  ||| ||||||||||||    
T  29721419 aacatcctccaacaccatttgcctaacaacgcaagattaaactccttcaatttcctcacacccaaccc 29721352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 224
Target Start/End: Original strand, 8300324 - 8300504
Alignment:
Q  44 cgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacc 143  Q
    ||||||| | |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | |    
T  8300324 cgatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatc 8300423  T
Q  144 cctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||||  ||||| | |||||||||||| || ||||||||||| ||||||||||||||||||   || |||||||||||    
T  8300424 cctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 8300504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 218
Target Start/End: Complemental strand, 37165730 - 37165566
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||||| |  || || ||||      
T  37165730 ccaccaagtagaaacactccggcccccaacctccaaccgcccatcctcctcgccatatctcgccaccagtaccctataccacaagcctcctctatccact 37165631  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    ||||  | |||||| || || ||||| | |||||||||||| ||| |||||| || ||| |||||    
T  37165630 aacatcctccaacatcactttcctaatagagcaatattaaattccttcaaccgcctcacccccaa 37165566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 7924917 - 7925087
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | |||||||||      
T  7924917 ccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaat 7925016  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||||||||| ||||||||||||||||||   || |||||||||||    
T  7925017 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 7925087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 62 - 224
Target Start/End: Original strand, 20824838 - 20825000
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    |||||| ||||||||||||| ||||||| |  ||||||||| | ||||| || |||| ||||||||||  ||||||||  ||||| || |  ||||  |     
T  20824838 aagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagcct 20824937  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||||||  ||||||||||||||    
T  20824938 ccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctcc 20825000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 68 - 204
Target Start/End: Original strand, 36025066 - 36025202
Alignment:
Q  68 cactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaaca 167  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| || |||||||| || |  || || |||| |||||  | ||||||    
T  36025066 cactccggtccccaacctccaaccgcccagcctcctcaccatatctcgccaccaaaactctataccataaccctcctctatccaccaacatccgccaaca 36025165  T
Q  168 ccatttccctaacaaagcaatattaaactccctcaac 204  Q
    |||||  ||||| |||||||||||||| || ||||||    
T  36025166 ccattatcctaataaagcaatattaaattcactcaac 36025202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 25193619 - 25193789
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||| ||||||||||||| | | |||||||||||| |||||| || | | | || |||| |    
T  25193619 ccaccaataagaatcactccggccccctacctccaacctcccagcctcctcaccataccgcaccaccaacacccgataccagaacccatctctatccacc 25193718  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||  | ||| |||||||| ||||| ||||||  |||||| ||||| |||  || ||||||||| |||||    
T  25193719 aacatcctccagcaccattttcctaataaagcacaattaaattcccttaactgcctcacacccaatcctcc 25193789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 207
Target Start/End: Complemental strand, 172658 - 172495
Alignment:
Q  44 cgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacc 143  Q
    ||||||| | |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   ||||||   | |    
T  172658 cgatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaacgcatc 172559  T
Q  144 cctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctc 207  Q
    ||||||||  ||||| | ||| |||||||| || ||||||||||| ||||||||||||||||||    
T  172558 cctctccaataacaacctccagcaccatttacccaacaaagcaatgttaaactccctcaacctc 172495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 12341098 - 12341248
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||  |||| ||||||||| |||||||||||||| |||| ||||||||||||| ||||||||||  |||||| ||||||| |  || || ||||      
T  12341098 ccaccaattagaaacactccggctcccaacctccaaccgcccagcctcctcaccatacctcgccaccagtaccctaaaccacaaccctcctctatccact 12341197  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||  | ||||||||| || ||||||||||| |||||||| ||| |||||    
T  12341198 aacatcctccaacaccactttcctaacaaagccatattaaattccttcaac 12341248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 28992838 - 28992752
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaact 140  Q
    |||||| |||||| ||||| |||||||||||| ||||||| |||||||||||||||| |  || |||||||||||||||||||||||    
T  28992838 ccaccacgaagaaacactctggcccccaaccttcaacctctcatcctcctcaccataacgagctaccaacaccctataccacaaact 28992752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 13879096 - 13878929
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| |||| |||||||| ||||||| |  |||||| || ||||||| || |||||||||||||||  ||| ||    |||||||| |||    
T  13879096 ccaccacgaagaacaactctggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccataa----cccctctctatc 13879001  T
Q  154 aacaaaca----ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccc 221  Q
    ||| ||||    ||||||||||||||||| ||||||||| |||||||  ||||| ||||| |||||||||||    
T  13879000 aactaacaaccgccaacaccatttccctagcaaagcaatgttaaacttgctcaatctccgaacacccaaccc 13878929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 4310451 - 4310368
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||    || ||||||| || ||||||||||||||||||||    
T  4310451 ccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacatcatatctagcaaccaacaccctataccacaa 4310368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 18187685 - 18187824
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||||||||||||||| ||||  |||||| |||  |||||||||||||||   | |||| | ||||||||||||||| ||| || || |  ||||| |     
T  18187685 aagaaccactccggccctcaactgccaaccgccctacctcctcaccatatcaatcaaccagctccctataccacaaaccacctctatctactaacaatct 18187784  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctc 201  Q
    |||||||||||| |||||||||||| | ||||||||||||    
T  18187785 ccaacaccatttacctaacaaagcagtgttaaactccctc 18187824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 17700119 - 17700181
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||    
T  17700119 ccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctcc 17700181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 25090918 - 25091082
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| |||||||  |||||||||||| ||||||| |  |||||| || |||||||  | |||||||||||||||  ||||||    |||||||| |||    
T  25090918 ccaccacgaagaacagctccggcccccatcctccaaaccaccatccgccacaccatacatagccaccaacaccctacgccacaa----cccctctctatc 25091013  T
Q  154 aacaaacacc----aacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    ||| |||| |    ||||||||||||||||||||||||| |||||||| ||||| ||||  ||||||||    
T  25091014 aactaacaaccgctaacaccatttccctaacaaagcaatgttaaactctctcaatctcctaacacccaa 25091082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 41664977 - 41664807
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| || ||||||| || ||||| |||||| |   |||||||    |||||||||      
T  41664977 ccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacaccttcctccacaaagcctccctctccaat 41664878  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||||||||| |||||||| |||||||||   || |||||||||||    
T  41664877 aacaaccgccaacaccatttacccaacaaagcaatgttaaactctctcaacctcgtaacccccaaccctcc 41664807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 5585230 - 5585366
Alignment:
Q  64 gaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacacc 163  Q
    |||| ||||||||||||| |||||||||| |||| | || |||||||||  | || ||||||||||||| ||| |||||| || || |  |||||  |||    
T  5585230 gaacaactccggcccccatcctccaacctaccatgcaccgcaccatatcgtgtcaacaacaccctatacaacagactacctctatcgactaacaactacc 5585329  T
Q  164 aacaccatttccctaacaaagcaatattaaactccct 200  Q
    |||||||||| ||||  |||||||||||||| |||||    
T  5585330 aacaccatttacctagtaaagcaatattaaattccct 5585366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 42649750 - 42649821
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacac 125  Q
    |||||| | ||||||||||||||||||| | | ||||||||| ||||||||||||||||| |||||||||||    
T  42649750 ccaccacgtagaaccactccggcccccatctttcaacctcccgtcctcctcaccatatctagccaccaacac 42649821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 6901439 - 6901482
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  6901439 gccaccaagaagaaccacttcggcccccaacctccaacctccca 6901482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 9923132 - 9923302
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| || ||||||| || |||||||||||| |   |||||||    || ||||||      
T  9923132 ccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacctttctccacaaagcttccttctccaat 9923231  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||||||||  | |||||||| | ||||||||| |||||||||   || |||||||||||    
T  9923232 aacaaccgccaacaccatttatccaacaaagctaaattaaactctctcaacctcgtaacccccaaccctcc 9923302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 11393957 - 11393787
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||||||||| ||||||||||||   ||||||||||||| |  |||| ||||| |  || || |  || |||||||||||||   | || || | |    
T  11393957 ccaccaagaagaacaactccggccccccgactccaacctcccaccaacctcgccataacgggcgacaagaacactataccacaaacctactctatcgacc 11393858  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| |||||||| |||| ||||||||||||||| | ||  || |||||||||||    
T  11393857 aacaacctccaacaccatttacctaacaatgcaaaattaaactccctcaatcacctaacccccaaccctcc 11393787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 17659362 - 17659404
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  17659362 ccaccaagaagaacaactccggcccccaacctccaacctccca 17659404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 24794385 - 24794447
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||  || |||||||||||    
T  24794385 ccaacaccatttacctaacaaagcaaaattaaactccctcaatctcctaacccccaaccctcc 24794447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 36157685 - 36157727
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  36157685 ccaccaagaagaacaactccggcccccaacctccaacctccca 36157727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 37434460 - 37434398
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||| || ||||||||||| |||||||| ||||||||||  ||||||||||||||    
T  37434460 ccaacaccattttcccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctcc 37434398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 38046896 - 38046972
Alignment:
Q  61 gaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    ||||||| ||| ||||||||| |||||||||||||||||||| ||||||| || || |||||  | |||||||||||    
T  38046896 gaagaacaacttcggcccccatcctccaacctcccatcctccacaccatacctagcaaccaatgctctataccacaa 38046972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 24425385 - 24425443
Alignment:
Q  166 caccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||||||||||  ||||||||||| | ||| ||||||||||| ||||||||    
T  24425385 caccatttccctaacaaagatatattaaactctcgcaatctccgcacacctaaccctcc 24425443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 43249305 - 43249259
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctcc 208  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  43249305 ccaacaccatttacctaacaaagcaaaattaaactctctcaacctcc 43249259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 4331721 - 4331770
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcct 103  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||| |||||    
T  4331721 ccaccgagaagaaacactccggtccccaacctccaacctcccattctcct 4331770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 12134857 - 12134898
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctcc 94  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  12134857 gccaccataaagaaccactccggcccccaacctccaacctcc 12134898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 194
Target Start/End: Original strand, 7452883 - 7453023
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| | ||| ||||||||||||||||||||||||| ||| |    || ||||| || |  || || | |||||||||||||| ||| || |||| |    
T  7452883 ccaccaacacgaaacactccggcccccaacctccaacctgccacctaattcgccatacctggaaactaagatcctataccacaaaccacctctgtccacc 7452982  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaa 194  Q
    ||||  | ||||||||| || |||||||||||| |||||||    
T  7452983 aacatccgccaacaccacttacctaacaaagcactattaaa 7453023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 24794288 - 24794327
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctc 93  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  24794288 ccaccaagaagaacaactccggccccccacctccaacctc 24794327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 4992299 - 4992175
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctc--ccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaa 159  Q
    |||||||||||||||||| |||||||||||||  ||  | ||||||||||| || || ||||| ||||||||||| || || |  |||||||| |  ||     
T  4992299 aagaaccactccggcccc-aacctccaacctctccctacttcctcaccatacctagcaaccaagaccctataccaaaacctccttctctccattagtaac 4992201  T
Q  160 caccaacaccatttccctaacaaagc 185  Q
    | ||||||||||||  ||||||||||    
T  4992200 ctccaacaccatttttctaacaaagc 4992175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 15014131 - 15014189
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaacc 220  Q
    ||||||||| |||||||||| || ||||||||||||||| | | |||| ||||||||||    
T  15014131 ccaacaccacttccctaacagagaaatattaaactcccttagcttccgaacacccaacc 15014189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 28992730 - 28992669
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctc 223  Q
    ||||||||||||| ||||||   |||||||||||||||||| |||| |||| ||||| ||||    
T  28992730 ccaacaccatttctctaacaggtcaatattaaactccctcatcctctgcacccccaaacctc 28992669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 43775375 - 43775295
Alignment:
Q  120 caacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    |||||||||| ||||||||||| | || || | |||||| | ||| || || |||||||||| |||||||||||| |||||    
T  43775375 caacaccctaaaccacaaactatcactatcaaccaacaatctccagcatcacttccctaacagagcaatattaaagtccct 43775295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 53 - 263
Target Start/End: Original strand, 41590626 - 41590836
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccat 152  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||| |     
T  41590626 gccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaagtactcctctcaac 41590725  T
Q  153 caacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaacaaatagtggac 252  Q
    |||||||| |||||||||||| ||||| || |||| ||||||||||| |||||||||||| ||||| |||||   ||||||||||||||||||||||| |    
T  41590726 caacaaacgccaacaccatttgcctaataacgcaacattaaactcccgcaacctccgcacccccaaacctccatactccctccgagaacaaatagtggtc 41590825  T
Q  253 cagctgaccca 263  Q
    || || |||||    
T  41590826 caactaaccca 41590836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 53 - 263
Target Start/End: Complemental strand, 4297919 - 4297709
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccat 152  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |     
T  4297919 gccaccaagaagaacctctccgggccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaactactcctctcaac 4297820  T
Q  153 caacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaacaaatagtggac 252  Q
    |||||||  |||||||||||| ||||| || |||| ||||||||||| |||||||||||| ||||| |||||   ||||||||||||||||||||||| |    
T  4297819 caacaaatgccaacaccatttgcctaataacgcaacattaaactcccgcaacctccgcacccccaaacctccatactccctccgagaacaaatagtggtc 4297720  T
Q  253 cagctgaccca 263  Q
    || || |||||    
T  4297719 caactaaccca 4297709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 202
Target Start/End: Original strand, 476744 - 476892
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||| |||  |||||||||||| ||||||||||||||  ||||||||||||||||||| |||| |||||||||||| |||| | | || || | |    
T  476744 ccaccaagatgaagtactccggccccctacctccaacctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctacc 476843  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctca 202  Q
    ||||  | |||||||||||| |||||||||||| |||||||||||||||    
T  476844 aacattcgccaacaccatttacctaacaaagcactattaaactccctca 476892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 263
Target Start/End: Original strand, 21077558 - 21077794
Alignment:
Q  24 taacccgtcgctaataatagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaac 123  Q
    |||||| || |||||  |||| |||||||||||||||||||||||||||||||||||||||||        ||| ||||||| | ||||||||||||||     
T  21077558 taacccatctctaattttagctatctctcgccaccaagaagaaccactccggcccccaacctct-------catactcctcatcgtatctcgccaccaaa 21077650  T
Q  124 accctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaa----caaagcaatattaaactccctcaacctccgcacacccaac 219  Q
    ||||||||||| ||||| | | |||||| ||| ||   |||||||||||| |||||    ||| |||  ||||||| |||||||||||||||| ||||||    
T  21077651 accctataccataaacttctcttctccaccaataactgccaacaccattttcctaattaacaacgcatcattaaaccccctcaacctccgcacccccaac 21077750  T
Q  220 cctccgacctccctccgagaacaaatagtggaccagctgaccca 263  Q
    |||||   ||||||  ||||||| ||||||| ||| ||||||||    
T  21077751 cctccatactccctttgagaacatatagtggtccaactgaccca 21077794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 33170181 - 33170359
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||| ||||||||||| |||| ||||||||||||| ||||||| |  |||||| || ||||||| || ||||| |||||||||  |||||| | | | |    
T  33170181 atctcccgccaccaagatgaacaactccggcccccatcctccaaaccaccatccgccgcaccatacctagccactaacaccctacgccacaacccatctc 33170280  T
Q  146 tctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||| |  ||||| | |||||||||||| ||||||||||||||||||||||||||||| ||||  ||||||| ||||||    
T  33170281 tctctactaacaacctccaacaccattttcctaacaaagcaatattaaactccctcaaactcctaacacccatccctcc 33170359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 204
Target Start/End: Original strand, 380434 - 380582
Alignment:
Q  56 accaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaa 155  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| | |||  ||| |||||||||||| |||| | | || |||| |||    
T  380434 accaagaagaaccactccggcccccaacctccaacctccctgcctcctcaccataccgcgcttccagcaccctataccagaaaccatctctatccaccaa 380533  T
Q  156 caaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||  | |||||||||||| ||||  ||  || |||||||||||||||||    
T  380534 catccgccaacaccatttgcctagtaagacactattaaactccctcaac 380582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 10780747 - 10780902
Alignment:
Q  69 actccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacac 168  Q
    ||||||||||||| ||||||| |  |||||| || | ||||| || |||| ||||||||||  ||||||||  ||||| || |  ||||  | |||||||    
T  10780747 actccggcccccatcctccaaaccaccatccgccactccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagccgccaacac 10780846  T
Q  169 catttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||    
T  10780847 catttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctcc 10780902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 224
Target Start/End: Complemental strand, 8299783 - 8299621
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    |||||| ||||||||||||| ||||||| |  ||||||||| | ||||| || |||| ||||||||||  ||||||||  ||||| || |  ||||  |     
T  8299783 aagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagcct 8299684  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||||||||||| ||||||||||| |||||||| | ||||||||  ||||||||||||||    
T  8299683 ccaacaccatttccccaacaaagcaatgttaaactctcgcaacctcctaacacccaaccctcc 8299621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 42259811 - 42259953
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||||||| ||||||||| |||||||||||| |||||| || |||||| ||||||| |||| |||||| ||||||| || | ||| || |||| |    
T  42259811 ccaccaagaagaagcactccggctcccaacctccaaactcccagccacctcacgatatctctccacaaacaccttataccaaaacccacctctatccacc 42259910  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaact 196  Q
    ||||  |  ||||||||||| |||||||| || ||||||||||    
T  42259911 aacatccgtcaacaccatttacctaacaaggctatattaaact 42259953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 42514251 - 42514421
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| || ||||||||| ||||||| || ||||| |||||| |   |||||||  | ||||||| |      
T  42514251 ccaccacgaagaacaactccggcccccatcctccaaactgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctctaat 42514350  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||| |||| || ||||||||||| ||||||||||||||||||   || |||||||||||    
T  42514351 aacaacctccaacacaatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 42514421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 42928662 - 42928832
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| || || |||| || ||||||||||||||| |||| |||    |||| || ||     
T  42928662 ccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacatcatacctagccaccaacaccctacaccataaagcttccctatctatt 42928761  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||||| || || |||||||||||||||||||| ||||||||||  ||||||| ||||||    
T  42928762 aacaatcgccaacaccactttcccaacaaagcaatattaaactctctcaacctcctaacacccatccctcc 42928832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 42039314 - 42039234
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||| || |||||||||||||| ||||||||| |||| || ||||||||||| ||||||||||||||||||||||    
T  42039314 ccaccaagaaaaagcactccggcccccatcctccaaccgcccaaccacctcaccatatttcgccaccaacaccctatacca 42039234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 30731923 - 30731753
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| || |||     |||||||  | |||||||||      
T  30731923 ccaccatgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaatacctgtctccacaaagcatccctctccaat 30731824  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||||||||| ||||||||||||||||||   || |||||||||||    
T  30731823 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaactcccaaccctcc 30731753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 27796015 - 27796182
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| |||| |||||||| ||||||| |  |||||| || ||||||| || |||||||||||||||  ||| ||    |||||||| |||    
T  27796015 ccaccacgaagaacaactctggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccataa----cccctctctatc 27796110  T
Q  154 aacaaaca----ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccc 221  Q
    ||| ||||    ||||||||||||||||| ||||||||| |||||||  ||||| ||||| |||||||||||    
T  27796111 aactaacaaccgccaacaccatttccctagcaaagcaatgttaaacttgctcaatctccgaacacccaaccc 27796182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 31642034 - 31642197
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||| |||||||| ||||||| ||||||||||||| ||||||| |  |||||| || |||||||||| |||||||||||| |   |||||||    ||     
T  31642034 atctcccgccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatatctagccaccaacacctttctccacaaagcttcct 31642133  T
Q  146 tctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccg 209  Q
    ||||||  ||||| | ||||||||||||  | |||||||| | ||||||||| |||||||||||    
T  31642134 tctccaataacaaccgccaacaccatttatccaacaaagctaaattaaactctctcaacctccg 31642197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 36256309 - 36256392
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||    ||||||||||  | ||||||||||||||||||||    
T  36256309 ccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacaccatatctaacaaccaacaccctataccacaa 36256392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 224
Target Start/End: Complemental strand, 27116792 - 27116612
Alignment:
Q  44 cgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacc 143  Q
    ||||||| | |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| | ||||| || ||||| |||||| |   ||||||   | |    
T  27116792 cgatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacgccatacctagccactaacacctttctccacaacgcatc 27116693  T
Q  144 cctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |  |||||  ||||| | |||||||||||| || ||||||||||| ||||||||||||||||||   || |||||||||||    
T  27116692 ctgctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 27116612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 204
Target Start/End: Complemental strand, 22174550 - 22174453
Alignment:
Q  107 catatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||||||||||||||||| |||||||| || | ||| || |||| |||||| | |||||||||| | ||||||||||| || ||||||||| |||||    
T  22174550 catatctcgccaccaacactctataccataacccacctctatccaccaacaacctccaacaccatctacctaacaaagctatgttaaactccttcaac 22174453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 22094861 - 22094709
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    |||||||| ||||||| ||| ||||||||| ||||||||||||||    |||| ||||| |  || || || || |||||||| |||| |||||| ||||    
T  22094861 cgccaccacgaagaacaacttcggcccccatcctccaacctcccacaaacctcgccataacgagcgactaaaactctataccaaaaaccacccctatcca 22094762  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
      ||||  | ||||||||| |||||||  |||||||||||||||||| |||||    
T  22094761 ctaacatcctccaacaccacttccctagtaaagcaatattaaactccttcaac 22094709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 34481479 - 34481623
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| ||||| | ||||||||||||||||||||||| ||| |   ||| ||||| || ||  | || |||||||||||||| | ||| || || | |    
T  34481479 ccaccaacaagaaactctccggcccccaacctccaacctgccacctaactcgccatacctggcggctaaaaccctataccacaacccacctctgtctacc 34481578  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactcc 198  Q
    ||||  | |||||||||||||||||||||||| || |||||||||    
T  34481579 aacatccgccaacaccatttccctaacaaagctatgttaaactcc 34481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 22176435 - 22176376
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatct 113  Q
    ||||||||||||  ||||||||||||||||| ||||||||||  ||||||||||||||||    
T  22176435 ccaccaagaagagacactccggcccccaaccgccaacctccctgcctcctcaccatatct 22176376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 25857009 - 25856878
Alignment:
Q  93 cccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatatta 192  Q
    |||||||||| | ||||| || |||| ||||||||||  ||||||||  ||||| || |  ||||  | | ||||||||||||| ||||||||||| |||    
T  25857009 cccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagcctctaacaccatttccccaacaaagcaatgtta 25856910  T
Q  193 aactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||||  ||||||||||||||    
T  25856909 aactctcgcaacctcctaacacccaaccctcc 25856878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 23238914 - 23239084
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| || |||| ||||||||||||||||||||| |  |||||| || ||||||| || ||||| |||||| |   |||||||    |||||||||      
T  23238914 ccaccacgacgaacaactccggcccccaacctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaagattccctctccaat 23239013  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| |  ||||||||||| || ||||||||||| || ||||||||||| |||   || |||||||||||    
T  23239014 aacaaccgtcaacaccatttacccaacaaagcaatgttgaactccctcaatctcgtaacccccaaccctcc 23239084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 26263040 - 26262962
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatac 132  Q
    ||||||| |||| ||||||||||||||| || ||||||| ||||||||||||||||| |  || || ||||||||||||    
T  26263040 ccaccaaaaagacccactccggcccccacccaccaaccttccatcctcctcaccataacgagcaactaacaccctatac 26262962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 35637669 - 35637815
Alignment:
Q  57 ccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaac 156  Q
    |||| ||||| |||||||| |||||||||||||| || |  ||||||| ||||| ||||| ||||||||| | ||||| ||||  || || || | ||||    
T  35637669 ccaaaaagaaacactccggtccccaacctccaacttcactgcctcctcgccatacctcgcaaccaacaccttgtaccataaacctcctctatcaaccaac 35637768  T
Q  157 aaacaccaacaccatttccctaacaaagcaatattaaactccctcaa 203  Q
    || | ||||||||| || ||||| || |||| ||| |||||||||||    
T  35637769 aacctccaacaccactttcctaataatgcaaaatttaactccctcaa 35637815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 35983400 - 35983230
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| |||||||||| || |||||||||||| |   |||||||    || ||||||      
T  35983400 ccaccacgaagaacaactccggcccccatcctccaaacctccatccgcctcaccatacctagccaccaacacctttctccacaaagcttccttctccaat 35983301  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||||||||  | |||||||| | |||||||||  ||||||||   || |||||||||||    
T  35983300 aacaaccgccaacaccatttatccaacaaagctaaattaaactctttcaacctcgtaacccccaaccctcc 35983230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 34338415 - 34338456
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccc 95  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  34338415 ccaccaagaagaaacactccggcccccaacctccaacctccc 34338456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 22935729 - 22935665
Alignment:
Q  120 caacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaag 184  Q
    |||||||||| ||||||||||| ||||||||||||||||   ||||||||| |||||||| ||||    
T  22935729 caacaccctaaaccacaaactatccctctccatcaacaacttccaacaccaattccctaataaag 22935665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 26262484 - 26262337
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||| |||||| |||||| |||| |||||||||||||||||||||||||    || |  |||||||||||||| ||||   | || |  |      
T  26262484 ccaccatgaagacccactctggcccc-aaccaccaacctcccatcctcctcaccataatgagcaagtaacaccctataccaaaaacctactctatttact 26262386  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctca 202  Q
    ||||  | |||||||||||| |||||||||||| |||||||||||||||    
T  26262385 aacatcctccaacaccattttcctaacaaagcagtattaaactccctca 26262337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 19513074 - 19513032
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  19513074 ccaccaagaagaacaactccggccccccacctccaacctccca 19513032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 28535284 - 28535115
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| || ||||||| || |||||||||||| |   |||||||    || ||||||      
T  28535284 ccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacctttctccacaaagcttccttctccaat 28535185  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||| |||| | ||||||||| |||||||||   || |||||||||||    
T  28535184 aacaaccgccaacaccatttacccaac-aagctaaattaaactctctcaacctcgtaacccccaaccctcc 28535115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 6866893 - 6866937
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||    
T  6866893 cgccaccacgaagaaccactctggccccccacctccaacctccca 6866937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 15862286 - 15862206
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    ||||||| | |||| |||||  |||||||||||||||| |||| |||| |||||||| || || | |||||||||||||||    
T  15862286 ccaccaatacgaacaactccatcccccaacctccaaccgcccagcctcttcaccatacctagcaatcaacaccctatacca 15862206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 26263487 - 26263447
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctca 202  Q
    |||||||||||| |||||||||||| |||||||||||||||    
T  26263487 ccaacaccattttcctaacaaagcagtattaaactccctca 26263447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 27325303 - 27325351
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccata 110  Q
    ||||||| |||||| ||||| ||||||||||||||| ||||||||||||    
T  27325303 aagaacccctccggtccccatcctccaacctcccatactcctcaccata 27325351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 29572465 - 29572401
Alignment:
Q  70 ctccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||||||||||||||||| |  ||||||||||||| || ||  |||||||||| |||||    
T  29572465 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttacca 29572401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 29573842 - 29573778
Alignment:
Q  70 ctccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||||||||||||||||| |  ||||||||||||| || ||  |||||||||| |||||    
T  29573842 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttacca 29573778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 29575219 - 29575155
Alignment:
Q  70 ctccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||||||||||||||||| |  ||||||||||||| || ||  |||||||||| |||||    
T  29575219 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttacca 29575155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 29576596 - 29576532
Alignment:
Q  70 ctccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||||||||||||||||| |  ||||||||||||| || ||  |||||||||| |||||    
T  29576596 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttacca 29576532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 29577973 - 29577909
Alignment:
Q  70 ctccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||||||||||||||||| |  ||||||||||||| || ||  |||||||||| |||||    
T  29577973 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttacca 29577909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 29579350 - 29579286
Alignment:
Q  70 ctccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||||||||||||||||| |  ||||||||||||| || ||  |||||||||| |||||    
T  29579350 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttacca 29579286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 30509658 - 30509614
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||    
T  30509658 cgccaccaagaagaacaactccggccccccacctccaatctccca 30509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 30549998 - 30549954
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||    
T  30549998 cgccaccaagaagaacaactccggccccccacctccaatctccca 30549954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 18896109 - 18896208
Alignment:
Q  83 cctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaa 182  Q
    ||||||||||||||||| |||||| ||| |||||  |||||| |||||||||||| |  || || || | |||||| | ||||||||| || ||||||||    
T  18896109 cctccaacctcccatccacctcacgatacctcgctgccaacatcctataccacaaccctcctctatcaaccaacaatctccaacaccacttacctaacaa 18896208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 8249425 - 8249467
Alignment:
Q  98 cctcctcaccatatctcgccaccaacaccctataccacaaact 140  Q
    |||||||||| || |||||||||||||| ||||||||||||||    
T  8249425 cctcctcaccgtacctcgccaccaacactctataccacaaact 8249467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 20208328 - 20208286
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||| | |||| ||||||||||||||||||||||||||||    
T  20208328 ccaccaaaacgaacaactccggcccccaacctccaacctccca 20208286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 35122207 - 35122145
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||||||||  || |||| |||||||| |||||||||||  || |||||||||||    
T  35122207 ccaacaccatttccctagtaatgcaacattaaacttcctcaacctcctaacccccaaccctcc 35122145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 32018962 - 32019035
Alignment:
Q  121 aacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaa 194  Q
    ||||||||| ||||||||||| | |||||| ||||||  | ||||||||| |||||||| ||||| | ||||||    
T  32018962 aacaccctaaaccacaaactatctctctccgtcaacaccctccaacaccacttccctaataaagctaaattaaa 32019035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 31864770 - 31864810
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacct 92  Q
    ||||||||||||||||||||||| || ||||||||| ||||    
T  31864770 cgccaccaagaagaaccactccgaccgccaacctcccacct 31864810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 35122317 - 35122277
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacct 92  Q
    |||||||||||||||| |||| ||||||| |||||||||||    
T  35122317 cgccaccaagaagaacaactctggccccccacctccaacct 35122277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 45270759 - 45270981
Alignment:
Q  41 tagcgatctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaact 140  Q
    ||||||| ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||    
T  45270759 tagcgatttctcgccaccacgcataaccactccggcccccaacctccaacctcccatcctcctcatcatatctcgccaccaaaatcctataccataaact 45270858  T
Q  141 acccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaa 240  Q
    || |||||| |||||||  | |||||||||||| |||||||| |||||||||||||||||||||||| |||| ||||| ||||| |  | || ||| |||    
T  45270859 actcctctctatcaacagccgccaacaccatttacctaacaatgcaatattaaactccctcaacctctgcacccccaaacctccaaaattccgccgcgaa 45270958  T
Q  241 caaatagtggaccagctgaccca 263  Q
    |||||||||| ||| || |||||    
T  45270959 caaatagtggtccaactaaccca 45270981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 54 - 218
Target Start/End: Complemental strand, 22191391 - 22191227
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||| | || |      
T  22191391 ccaccacgaagaaacactccggcccccaaccaccaacctcccatcctcctcaccataacacgccaccaacaccctataccacatactacccttatcaact 22191292  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    || || | |||||||||||| ||||||| || || |||||||||||||| ||||| ||| |||||    
T  22191291 aataacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 22191227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 21405368 - 21405522
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||| |  || ||||||||||||||||||| ||||||| | || |      
T  21405368 ccaccacgaagaaacactctggcccccaaccaccaacctcccatcctcctcaccataacgtgctaccaacaccctataccacatactacccttatcaact 21405467  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctcc 208  Q
    || || | |||||||||||| ||||||| || || |||||||||||||| |||||    
T  21405468 aataacctccaacaccattttcctaacagagaaacattaaactccctcatcctcc 21405522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 1248172 - 1248049
Alignment:
Q  77 ccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccc 176  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||| |||  | |||| ||| | |||||||||| |||| ||    
T  1248172 cccctacctccaacctccctacctcctcaccatatctcgccaccaacagcctataccaaaaaccacctttatccaccaatatacaccaacactatttacc 1248073  T
Q  177 taacaaagcaatattaaactccct 200  Q
    |||||||||| |||||||||||||    
T  1248072 taacaaagcactattaaactccct 1248049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 3074276 - 3074440
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| |||||| |||||||| |||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||||| ||||||  | ||        
T  3074276 ccaccacgaagaaacactccggtccccaaccgccaacctcccatcctcctcaccataacgcgctaccaacaccctataccacatactacctttatcgtct 3074375  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    |  || | |||||||||||| ||||||| || || |||||||||||||| ||||| ||| |||||    
T  3074376 agtaacctccaacaccattttcctaacagagaaacattaaactccctcatcctcctcactcccaa 3074440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 3544710 - 3544562
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||| |||  |||||||||||| ||||||||||||||  ||||||||||||||||||| |||| |||||||||||| |||| | | || || | |    
T  3544710 ccaccaagatgaagtactccggccccctacctccaacctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctacc 3544611  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctca 202  Q
    ||||  | |||||||||||| ||||||||| ||  ||||||||||||||    
T  3544610 aacattcgccaacaccatttacctaacaaaacacaattaaactccctca 3544562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 19014592 - 19014443
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||||||| |||||||||||| |||||||||||||||   |||||||||||||||||||||||||||   |||||| || | ||| || |||| |    
T  19014592 ccaccaagaagaaacactccggcccc-aacctccaacctccctgtctcctcaccatatctcgccaccaacacttaataccaaaacccacctctgtccacc 19014494  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||  | ||||| |||||| |||| |||||| | ||||||||||||||||    
T  19014493 aacatccgccaactccatttacctagcaaagctaaattaaactccctcaac 19014443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 38070357 - 38070503
Alignment:
Q  48 ctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctc 147  Q
    ||||| |||||||| |||| ||||||| |||||||||||||||| |||| ||||||||||||| || |||||||| || ||||||||||| |  || ||     
T  38070357 ctctctccaccaagtagaaacactccgacccccaacctccaaccgcccagcctcctcaccataccttgccaccaaaactctataccacaaccctcctcta 38070456  T
Q  148 tccatcaacaaacaccaacaccatttccctaacaaagcaatattaaa 194  Q
    |||| |||||| | |||||||||||| | ||| ||| ||||||||||    
T  38070457 tccaccaacaaccgccaacaccattttcttaataaaacaatattaaa 38070503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 28358421 - 28358501
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    ||||||||| ||  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  28358421 ccaccaagatgagacactccggcccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctgtacca 28358501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 25504605 - 25504453
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    |||||||||||||||| |||| |||||||||||||||||||||||  | |||| ||||| |  || || || || |||||||| |||| |||||| ||||    
T  25504605 cgccaccaagaagaacaactctggcccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatcca 25504506  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
      ||||  | |||||||||||||||||  || ||||||||||||||| |||||    
T  25504505 ctaacatcctccaacaccatttccctagtaaggcaatattaaactccatcaac 25504453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 6051134 - 6051304
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | ||| |||||      
T  6051134 ccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatcccgctccaat 6051233  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||||||||| ||||||||| ||||||||   || |||||||||||    
T  6051234 aacaacctccaacaccatttacccaacaaagcaatgttaaactccttcaacctcttaacccccaaccctcc 6051304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 200
Target Start/End: Original strand, 52692002 - 52692148
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||||||| ||||||| ||| | ||| ||||||||||| ||||||||||||| | ||||||||||||||||||||| || |   | || |||| |    
T  52692002 ccaccaagaagaatcactccgaccctctaccaccaacctcccagcctcctcaccataccgcgccaccaacaccctataccagaacccctctctatccacc 52692101  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||  | |||||||||||| ||||| ||||||  |||||| |||||    
T  52692102 aacatcctccaacaccattttcctaataaagcacaattaaattccct 52692148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 13867445 - 13867272
Alignment:
Q  51 tcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcc 150  Q
    ||||||||| || ||| |||||| ||||||||||||||||| |||| ||  ||||||||| |  || ||||  ||||||||||| |||| ||| || |||    
T  13867445 tcgccaccacgatgaaacactcctgcccccaacctccaaccgcccagccgtctcaccataccgagctaccaggaccctataccataaaccacctctatcc 13867346  T
Q  151 atcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    | |||||  | |||||||||||| |||||||||||| ||||||| |||  |||| ||| ||| ||||| |||||    
T  13867345 accaacatccgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaacctcc 13867272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 40563175 - 40563084
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    ||||||| ||||||||| ||| || ||||||||||||||||||||||| |  |||| || ||||||||||||||||| || |||||||||||    
T  40563175 atctctctccaccaagatgaaacagtccggcccccaacctccaacctctctgcctcatctccatatctcgccaccaaaactctataccacaa 40563084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 203
Target Start/End: Complemental strand, 32352905 - 32352770
Alignment:
Q  68 cactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaaca 167  Q
    ||||||||||||||||||||||||| ||| |    || ||||| || || || || |||||||||||||||| ||| || |||| |||||  | ||||||    
T  32352905 cactccggcccccaacctccaacctgccacctaattcgccatacctagcgactaaaaccctataccacaaaccacctctatccaccaacatccgccaaca 32352806  T
Q  168 ccatttccctaacaaagcaatattaaactccctcaa 203  Q
    |||||| ||||||||||| | |||||||||| ||||    
T  32352805 ccattttcctaacaaagctaaattaaactccttcaa 32352770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 35541604 - 35541735
Alignment:
Q  93 cccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatatta 192  Q
    |||||||||| ||||||| || ||||| |||||| |   |||||||  | |||||||||  ||||| | |||||||||||| || ||||||||||| |||    
T  35541604 cccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgtta 35541703  T
Q  193 aactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||||||   || |||||||||||    
T  35541704 aactccctcaacctcttaacccccaaccctcc 35541735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 27393525 - 27393394
Alignment:
Q  87 caacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagca 186  Q
    |||||||||  ||||||||||||| || || ||||||||| ||||||| ||||  || || || | |||||| | ||||||||| || |||||||| |||    
T  27393525 caacctccctgcctcctcaccatacctagcaaccaacaccatataccataaacctcctctatcaaccaacaacctccaacaccactttcctaacaatgca 27393426  T
Q  187 atattaaactccctcaacctccgcacacccaa 218  Q
    | ||||||||||| |||| ||| ||| |||||    
T  27393425 agattaaactcccgcaacttcctcacccccaa 27393394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 20796296 - 20796342
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctcc 208  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  20796296 ccaacaccatttacctaacaaagcaaaattaaactccctcaacctcc 20796342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 31068813 - 31068727
Alignment:
Q  114 cgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||| |||||||||| |||| |||||  |||| |||| |||||| | ||||||||| |||||||| ||||||| ||||||||||||    
T  31068813 cgccaacaacaccctaaaccataaactctccctatccaccaacaaccgccaacaccacttccctaataaagcaaaattaaactccct 31068727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 39430808 - 39430962
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| |||||| |||||||||||||||||||||||||||| |  |||| ||||| |  || || |  || ||||||||||| |   | || || | |    
T  39430808 ccaccaataagaacaactccggcccccaacctccaacctcccaccaacctcgccataacgggcgactagaacactataccacaaccctactctatctacc 39430907  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctcc 208  Q
    ||||  | ||||||||| || ||||||||||||  ||||||||||||||||||||    
T  39430908 aacatcctccaacaccacttacctaacaaagcacaattaaactccctcaacctcc 39430962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 48073032 - 48072882
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||| ||||||||||||||||||||||||| ||| |    || ||||| ||  | || || |||| ||||||||||| ||| || |||| |||||  |     
T  48073032 aagaaacactccggcccccaacctccaacctgccacctaattcgccatacctgtcgactaaaacccgataccacaaaccacctctatccaccaacatccg 48072933  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcac 212  Q
    |||||||||||| ||||||||||| | |||||||||| ||||  |||||||    
T  48072932 ccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcac 48072882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 224
Target Start/End: Original strand, 45795827 - 45795976
Alignment:
Q  75 gcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttc 174  Q
    ||||||||||||||||| |||| ||  ||||||||| |  || ||||  ||| ||||||| |||| |||  | |||| |||||  | ||||||||||||     
T  45795827 gcccccaacctccaaccgcccaaccgtctcaccataccgtgctaccaggaccttataccataaaccacctttatccaccaacatccgccaacaccattta 45795926  T
Q  175 cctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||| ||||||| |||  |||| ||| ||| |||||||||||    
T  45795927 cctaacaaagcactattaaattcctgcaacttcctcacccccaaccctcc 45795976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 15174794 - 15174746
Alignment:
Q  159 acaccaacaccatttccctaacaaagcaatattaaactccctcaacctc 207  Q
    |||||||||||| |||||||||| ||||| |||||||||||||||||||    
T  15174794 acaccaacaccacttccctaacagagcaacattaaactccctcaacctc 15174746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 47622694 - 47622614
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacacc 126  Q
    ||||||| |||||||||||||| ||||||||||| | ||||||| |  |||||| || ||||||| || ||||||||||||    
T  47622694 atctctctccaccaagaagaacaactccggcccctatcctccaaacctccatccaccacaccatacctagccaccaacacc 47622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 220
Target Start/End: Original strand, 5809111 - 5809278
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccat 152  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||| ||| | ||||||| | ||| || |  ||||||||||| |  | |||  | ||||     
T  5809111 gccactaagatgaaacactccggcccccaacctccaacctcccaaccttcacaccataccgcgctacaagaaccctataccagagcccacctttgtccac 5809210  T
Q  153 caacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaacc 220  Q
    |||||  | |||||||||| | |||||||||||  ||||||| |||  |||| ||| ||| |||||||    
T  5809211 caacatccgccaacaccatgtacctaacaaagcgctattaaattcctgcaacttcctcacccccaacc 5809278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 49264465 - 49264403
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||| ||||||||| |||  |||||||||||||||||||  || |||||||||||    
T  49264465 ccaacaccatttacctaacaaaacaaagttaaactccctcaacctcctaacccccaaccctcc 49264403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 49264573 - 49264532
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccc 95  Q
    ||||||| |||||| |||||||||||||||||||||||||||    
T  49264573 ccaccaataagaacaactccggcccccaacctccaacctccc 49264532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 20796199 - 20796238
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctc 93  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  20796199 ccaccaataagaacaactccggcccccaacctccaacctc 20796238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 42910265 - 42910210
Alignment:
Q  166 caccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccc 221  Q
    ||||| |||||||  ||||||| |||||| |||||||||||||||||||| |||||    
T  42910265 caccacttccctagtaaagcaacattaaattccctcaacctccgcacacctaaccc 42910210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 25252270 - 25252184
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaac 139  Q
    |||||||  ||||||||||| | ||||||||| | ||||||||  |||| ||| |||| |  || ||||||||||||||||||||||    
T  25252270 gccaccacaaagaaccactctgccccccaaccactaacctccctgcctcttcatcataacgagctaccaacaccctataccacaaac 25252184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 26721164 - 26721206
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||    
T  26721164 ccaccaagacgaacaactccggcccctaacctccaacctccca 26721206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 29644313 - 29644355
Alignment:
Q  98 cctcctcaccatatctcgccaccaacaccctataccacaaact 140  Q
    |||||||||||||| | || |||||||||||||||||||||||    
T  29644313 cctcctcaccatattttgcaaccaacaccctataccacaaact 29644355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 44692059 - 44692109
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcac 212  Q
    ||||||||| || || |||||||| ||||||||||||||||||||| ||||    
T  44692059 ccaacaccacttaccaaacaaagctatattaaactccctcaacctctgcac 44692109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 45795735 - 45795793
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccata 110  Q
    ||||||||||| ||| |||||| ||||||||||||||||| |||| ||  |||||||||    
T  45795735 cgccaccaagatgaaacactcctgcccccaacctccaaccgcccaaccgtctcaccata 45795793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 44890075 - 44890123
Alignment:
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||||| | ||||||||| |||||||| |||||| |||||||||||||    
T  44890075 tcaacaaccgccaacaccacttccctaataaagcactattaaactccct 44890123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 1e-50; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 46 - 263
Target Start/End: Original strand, 10362656 - 10362872
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | ||    
T  10362656 atctcccgccaccaagaagaaccactccggccccccacctccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaactcctcc 10362755  T
Q  146 tctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaacaaat 245  Q
    ||||||  |  ||    ||||| ||||| ||||||||||||  |||||||||||| ||||||||||  | ||| |||||   ||||||||||||||||||    
T  10362756 tctccaatagtaactggcaacatcattt-cctaacaaagcatcattaaactcccttaacctccgcaacctcaaacctccatactccctccgagaacaaat 10362854  T
Q  246 agtggaccagctgaccca 263  Q
    ||||| ||| ||||||||    
T  10362855 agtggtccaactgaccca 10362872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 248
Target Start/End: Original strand, 34434823 - 34434985
Alignment:
Q  86 ccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagc 185  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| |||||| | |||||  | |||||||||||| |||||||| ||    
T  34434823 ccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccatatactactcctctctaccaacatccgccaacaccatttacctaacaatgc 34434922  T
Q  186 aatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaacaaatagt 248  Q
    ||||||||||||||||||||||||||| ||||  ||||  | ||||| |||||||||||||||    
T  34434923 aatattaaactccctcaacctccgcacccccagacctctaaactcccgccgagaacaaatagt 34434985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 194
Target Start/End: Original strand, 19350475 - 19350615
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||| ||  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| || | ||| || || |||    
T  19350475 ccaccaagatgatacactccggcccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatctatc 19350574  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaa 194  Q
    ||||| | |||||||||||| || | |||||| | ||||||    
T  19350575 aacaaccgccaacaccatttacccatcaaagctaaattaaa 19350615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 32186214 - 32186333
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||| || | ||| || |||| |    
T  32186214 ccaccaagaagaagcactccggcccccaacctccaacctcccagccacctcactatatctcgccaccaacaccctataccaaaacccacctctatccacc 32186313  T
Q  154 aacaaacaccaacaccattt 173  Q
    |||||   ||||||||||||    
T  32186314 aacaactgccaacaccattt 32186333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 17605943 - 17605773
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||| ||||||||| ||||||||||||| ||||||| |  ||||||||| | ||||| || |||| ||||||||||  ||||||||  ||||| || |      
T  17605943 ccacaaagaagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaact 17605844  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||  ||||||||||||||||| ||||||||||| |||||||| ||||||||||  ||||||||||||||    
T  17605843 aacagccaccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctcc 17605773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 29056050 - 29056214
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |  || ||||||||||||||||||| |||| |  | || |      
T  29056050 ccaccacgaagaaacactccggcccccaaccgccaacctcccatcctcctcaccataacgtgctaccaacaccctataccacatactatctttatcgact 29056149  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    || || | ||||||||||||  |||||| || || |||||||||||||| ||||| ||| |||||    
T  29056150 aataacctccaacaccatttttctaacagagaaacattaaactccctcatcctcctcacccccaa 29056214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 14843746 - 14843576
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||| |||  |||||| ||||| ||||||||||||||   |||||||||||||||||| |||| |||||||||||| |||| | | || || | |    
T  14843746 ccaccaagatgaagtactccgtccccctacctccaacctccctgtctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctacc 14843647  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||  | |||||||||||| ||||||||| || ||||||||||||||| | | | ||| |||||||||||    
T  14843646 aacattcgccaacaccatttacctaacaaatcactattaaactccctcagctttctcactcccaaccctcc 14843576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 222
Target Start/End: Complemental strand, 18682191 - 18682015
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |  |||||||||  |||||| || |||||||||||| || |||| |    |||||    
T  18682191 atctcccgccaccaagaagaacaactccggcccccatcctccaaacctccatcctccgaaccatacctggccaccaacaccttacaccata----acccc 18682096  T
Q  146 tctccatcaacaaaca----ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccct 222  Q
    ||||  ||||| ||||    |||||||||||| |||||||||||| | ||||| |||||||||||||| | ||||||||||    
T  18682095 tctctgtcaactaacaacctccaacaccattttcctaacaaagcagtgttaaaatccctcaacctccgaaaacccaaccct 18682015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 29976595 - 29976467
Alignment:
Q  76 cccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttcc 175  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| || | ||| || || |||||||| | ||||| |||||| |    
T  29976595 cccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatctatcaacaaccgccaacgccatttac 29976496  T
Q  176 ctaacaaagcaatattaaactccctcaac 204  Q
    | | |||||| | |||||| |||| ||||    
T  29976495 ccatcaaagctaaattaaattcccgcaac 29976467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 25350755 - 25350923
Alignment:
Q  56 accaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaa 155  Q
    ||||| ||||| ||||||||||||| ||| ||||||||||| ||||||||||||| | ||||||||||||||||||||| || | | | || |||| |||    
T  25350755 accaaaaagaatcactccggccccctaccaccaacctcccagcctcctcaccataccgcgccaccaacaccctataccagaacccatctctatccaccaa 25350854  T
Q  156 caaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||  | |||| ||||||| ||||| ||||||  |||||| ||| | ||  ||| ||||||||| |||||    
T  25350855 catcctccaaaaccattttcctaataaagcacaattaaattcctttaatttcctcacacccaatcctcc 25350923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 10576859 - 10576689
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||| | ||||||||||||| ||||||| |  |||||| || ||||||| || |||| ||||||||||  || |||||  ||||| || |      
T  10576859 ccaccacgaagagcaactccggcccccatcctccaaaccaccatccgccacaccatacctagccaacaacaccctactccgcaaacctcccctatcaact 10576760  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||  | ||||||||||||||| |||||| |||| |||||||| ||||||||||  ||||||||||||||    
T  10576759 aacagccgccaacaccatttccccaacaaaacaatgttaaactctctcaacctcctaacacccaaccctcc 10576689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 503143 - 502991
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||  | |||| ||||| |  || || || || ||||| || |||| |||||| ||||    
T  503143 cgccaccaagaagaacaactccggcccccatcctccaacctcccacacacctcgccataacgggcgactaaaactctatatcaaaaaccacccctatcca 503044  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
      ||||  | |||||||||||||||||  || ||||||||||||||| |||||    
T  503043 ctaacatcctccaacaccatttccctagtaaggcaatattaaactccttcaac 502991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 225
Target Start/End: Original strand, 13938249 - 13938420
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccat 152  Q
    |||||||||| |||| ||||||||||||| ||||||| |  |||||| || ||||||| || ||||| |||||||||  |||| ||| | | ||||| |     
T  13938249 gccaccaagatgaacaactccggcccccatcctccaaaccaccatccgccgcaccatacctagccactaacaccctacgccac-aaccatctctctctac 13938347  T
Q  153 caacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccg 225  Q
     ||||| | |||||||||||| | |||||||||||| |||||||| ||||| ||||  ||||||| |||||||    
T  13938348 taacaacctccaacaccattttcttaacaaagcaatgttaaactctctcaatctcctaacacccatccctccg 13938420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 19256169 - 19256321
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    |||||||||||||||| |||| |||||||||||||||||||||||  | |||| ||||| |  || || || || |||||||| |||| |||||| ||||    
T  19256169 cgccaccaagaagaacaactctggcccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatcca 19256268  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
      ||||  | |||||||||||||||||  || |||| |||||||||| |||||    
T  19256269 ctaacatcctccaacaccatttccctagtaatgcaacattaaactccttcaac 19256321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 14372600 - 14372430
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||||||||| ||||||||||||| ||||||| ||  | ||| || ||||||| || |||||||||||| ||  ||| || |   |||||||||      
T  14372600 ccaccaagaagaacaactccggcccccatcctccaaactttcgtccgccacaccatacctagccaccaacaccttacgccataacccttccctctccact 14372501  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||| || ||||||||| |||||||| || | ||||||||| || ||||| |  ||||||||||||||    
T  14372500 aacaaacgcctacaccattttcctaacaaggctaaattaaactctcttaaccttctaacacccaaccctcc 14372430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 1104548 - 1104408
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    |||||| |||| ||||||||||| |||||||| |  ||||||||||||| |  || |||| ||||||||||||||||| ||  || |  |  |||||||     
T  1104548 aagaactactcaggcccccaaccaccaacctcactgcctcctcaccataacgagcaaccatcaccctataccacaaaccacatctatttactaacaaact 1104449  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctca 202  Q
    |||||||||||| |||||||||||| | |||| ||||||||    
T  1104448 ccaacaccatttacctaacaaagcagtgttaatctccctca 1104408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 218
Target Start/End: Original strand, 15674376 - 15674524
Alignment:
Q  70 ctccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacacc 169  Q
    ||||||||||||||||||||||| ||| |    ||||||||||| || || || |||||||||||||||| | | |  |||| |||||  | ||||||||    
T  15674376 ctccggcccccaacctccaacctgccacctaattcaccatatctggcgactaaaaccctataccacaaaccatctcggtccaccaacatccgccaacacc 15674475  T
Q  170 atttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    |||| ||||||||||| | |||||||||| ||||  ||||||| |||||    
T  15674476 attttcctaacaaagctaaattaaactccttcaatttccgcacccccaa 15674524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 23347068 - 23346912
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||| ||||||||||||||||||||||||| ||| |    || ||||| || || || || |||||||||||||||| ||| || |||| || ||  |     
T  23347068 aagaaacactccggcccccaacctccaacctgccacctaattcgccatacctggcgactaaaaccctataccacaaaccacctctatccaccagcatccg 23346969  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    |||||||||||| ||||||||||| | |||||||||| ||||  ||||||| |||||    
T  23346968 ccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcacccccaa 23346912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 26514255 - 26514335
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||  ||||||||||||||||||||||||||| |||||  ||||||||||||| |  ||||||||||| ||||||||    
T  26514255 ccaccaaatagaaccactccggcccccaacctccaaactccctgcctcctcaccataccgagccaccaacactctatacca 26514335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 33640447 - 33640598
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||  | |||| ||||| |  || || || || |||||||| |||| |||||| ||||    
T  33640447 cgccaccaagaagaacaactccggcccc-aacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatcca 33640545  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
      ||||  | |||||||||||||||||  || |||| |||||||||| |||||    
T  33640546 ctaacatcctccaacaccatttccctagtaaggcaacattaaactccttcaac 33640598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 13086070 - 13086240
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| |||||| |||||||||||||||||||||||||||  |  |||| ||||| |  || || |  || |||||||||||||   | || || | |    
T  13086070 ccaccaaaaagaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaacctactctatctacc 13086169  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||  | |||||||||||| ||||||||||||| |||||||||| ||||| |||  || |||||||||||    
T  13086170 aacatcctccaacaccatttacctaacaaagcaacattaaactccttcaacttcctaacccccaaccctcc 13086240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 207
Target Start/End: Original strand, 2554137 - 2554290
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| || ||||||| || ||||| |||||| |   |||||||    |||||||||      
T  2554137 ccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaagcttccctctccaat 2554236  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctc 207  Q
    |||||   |||||||||||| || ||||||||||| |||||||| |||||||||    
T  2554237 aacaactgccaacaccatttacccaacaaagcaatgttaaactctctcaacctc 2554290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 14686622 - 14686453
Alignment:
Q  49 tctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctct 148  Q
    |||| ||||||||| ||| ||||||||||||| |||||||||| |||| ||  ||| ||||| | ||| ||||  ||||||||||| || |  || || |    
T  14686622 tctctccaccaagatgaaacactccggccccctacctccaaccgcccaaccgtctccccataccgcgctaccaggaccctataccaaaatccgcctctat 14686523  T
Q  149 ccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    ||| |||||  | |||||||||||| |||||||||||  ||||||| ||||  ||||||| ||| |||||    
T  14686522 ccaccaacatccgccaacaccatttacctaacaaagcgctattaaattcccgtaacctcctcactcccaa 14686453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 7956271 - 7956200
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||||||||| | | ||||||||||||| ||||||||||||||||| ||||||||||| | ||||||    
T  7956271 aagaaccactccggcctc-atcctccaacctcccgtcctcctcaccatatctagccaccaacactcgatacca 7956200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 21629692 - 21629561
Alignment:
Q  93 cccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatatta 192  Q
    |||||||||| | ||||| || |||| ||||||||||  ||||||||  | ||| || |  ||||  | ||||||| ||||||| ||||||||||| |||    
T  21629692 cccatcctccacgccatacctagccaacaacaccctactccacaaacctcacctatcaactaacagccgccaacacaatttccccaacaaagcaatgtta 21629593  T
Q  193 aactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| ||||||||||  ||||||||||||||    
T  21629592 aactctctcaacctcctaacacccaaccctcc 21629561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 11060471 - 11060429
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  11060471 ccaccaagaagaacaactccggcccccaacctccaacctccca 11060429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 17078799 - 17078757
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  17078799 ccaccaagaagaacaactccggcccccaacctccaacctccca 17078757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 17577319 - 17577173
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    |||||| |||| |||||||| ||||||| |   |||||||| | ||||| || |||| ||||||||||  ||||||||  ||||| || |  ||||  |     
T  17577319 aagaacaactctggcccccatcctccaaaccatcatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagcct 17577220  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctcc 208  Q
    ||||||||||||||| ||||||||||| |||||||| | ||||||||    
T  17577219 ccaacaccatttccccaacaaagcaatgttaaactctcgcaacctcc 17577173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 18051058 - 18051016
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  18051058 ccaccaagaagaacaactccggcccccaacctccaacctccca 18051016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 18588902 - 18588960
Alignment:
Q  76 cccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||||||||| | ||||||    
T  18588902 cccccatcctccaacctcccgtcctcctcaccatatctagccaccaacactcgatacca 18588960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 10922084 - 10922160
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccata--tctcgccaccaacaccct 128  Q
    |||||||||||||| ||||||||||||| ||| || ||| ||||||||| |||||||  |||||||||||| |||||    
T  10922084 ccaccaagaagaacaactccggcccccatccttcagccttccatcctccacaccatatctctcgccaccaaaaccct 10922160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 8264752 - 8264796
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||    
T  8264752 cgccaccaagaagaacaactccggcccccatcctccaacctccca 8264796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 17228636 - 17228692
Alignment:
Q  168 ccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||| ||||| |||||    
T  17228636 ccatttccctaacaaagaaatattaaactccctcaacctcttcacccccaaacctcc 17228692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 33805309 - 33805353
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||||| |||||||||||| |||||||||||||||    
T  33805309 cgccaccaagaagaacaactccggccccccacctccaacctccca 33805353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 23065656 - 23065613
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  23065656 gccaccacgaagaaccactccggccccccacctccaacctccca 23065613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 20882534 - 20882472
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||||||||| | ||||||||||| |||||||| ||||||||||  ||||||| ||||||    
T  20882534 ccaacaccatttctccaacaaagcaatgttaaactctctcaacctcctaacacccatccctcc 20882472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 2923402 - 2923443
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccc 95  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  2923402 ccaccaagaagaaacactccgtcccccaacctccaacctccc 2923443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 5085637 - 5085593
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||    
T  5085637 cgccaccaagaagaacaacttcggcccccatcctccaacctccca 5085593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 12673712 - 12673644
Alignment:
Q  69 actccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    |||||| | |||| |||||||||||  ||||||||||||||| || |||||||||||  ||||||||||    
T  12673712 actccgactcccatcctccaacctcatatcctcctcaccatacctagccaccaacactttataccacaa 12673644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 15602855 - 15602899
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatc 98  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||    
T  15602855 ccaccaaatagaaccactccggcccccatcctccaacctcccatc 15602899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 26586837 - 26586885
Alignment:
Q  160 caccaacaccatttccctaacaaagcaatattaaactccctcaacctcc 208  Q
    ||||||||||| ||||||||||| |||| |||||| |||||||||||||    
T  26586837 caccaacaccacttccctaacaatgcaacattaaattccctcaacctcc 26586885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 649675 - 649637
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacct 92  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  649675 ccaccaagaagaacaactccggcccccaacctcccacct 649637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 21549487 - 21549549
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||| ||||  |||||||||||||||||| |||| |||| ||| ||||| |||||    
T  21549487 ccaacaccatttacctagtaaagcaatattaaactccttcaatctcctcacccccaaacctcc 21549549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 24766915 - 24766853
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||| ||||||||||||| ||||||||| || ||||||   || |||||||||||    
T  24766915 ccaacaccatttacctaacaaagcaacattaaactctcttaacctcgtaacccccaaccctcc 24766853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 33805419 - 33805481
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||||||||||||| ||| |||| |||||||||| ||||| |||  || |||||||||||    
T  33805419 ccaacaccatttccctagcaatgcaacattaaactccttcaacttcctgacccccaaccctcc 33805481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 15161272 - 15161325
Alignment:
Q  153 caacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacct 206  Q
    ||||| || ||||||||| |||||||||||||| |||||||| ||| |||||||    
T  15161272 caacatacgccaacaccacttccctaacaaagctatattaaattccatcaacct 15161325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 18016703 - 18016768
Alignment:
Q  114 cgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaa 179  Q
    |||| ||||||||||||||||||||||  || |||||| |||||  | ||||||||| ||||||||    
T  18016703 cgccgccaacaccctataccacaaactttccttctccaccaacacccgccaacaccacttccctaa 18016768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 34600866 - 34600943
Alignment:
Q  123 caccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||||| |||||| |||  ||||||||| |||||  | ||||||||| |||| |||||| ||| |||||||||||||    
T  34600866 caccctaaaccacatactctccctctccaccaacatccgccaacaccacttccttaacaacgcactattaaactccct 34600943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 34627411 - 34627488
Alignment:
Q  123 caccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||||| |||||| |||  ||||||||| |||||  | ||||||||| |||| |||||| ||| |||||||||||||    
T  34627411 caccctaaaccacatactctccctctccaccaacatccgccaacaccacttccttaacaacgcactattaaactccct 34627488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 10920041 - 10919993
Alignment:
Q  86 ccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    ||||||||||  ||||||||||||| || || |||||||||||||||||    
T  10920041 ccaacctccccgcctcctcaccatacctagcaaccaacaccctatacca 10919993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 15988111 - 15988063
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccata 110  Q
    |||||||||| ||||||||||| ||||||||| ||| | ||||||||||    
T  15988111 aagaaccacttcggcccccaacgtccaacctctcattcacctcaccata 15988063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 19257429 - 19257465
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaa 89  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  19257429 gccaccaacaagaatcactccggcccccaacctccaa 19257465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 19616380 - 19616348
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaa 194  Q
    |||||||||||| ||||||||||||||||||||    
T  19616380 ccaacaccatttacctaacaaagcaatattaaa 19616348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 26205924 - 26206036
Alignment:
Q  106 ccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacc 205  Q
    |||||||| || || || ||| |||||||||||| ||| || || | ||| || | |||||||||||||| |||||| |  |||||||||||| |||| |    
T  26205924 ccatatctggcgactaaaaccgtataccacaaaccacctctatcaaccaataaccgccaacaccatttccttaacaatgttatattaaactccttcaatc 26206023  T
Q  206 tccgcacacccaa 218  Q
    ||| ||| |||||    
T  26206024 tcctcacccccaa 26206036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 247
Target Start/End: Original strand, 38296258 - 38296430
Alignment:
Q  75 gcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttc 174  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||| | ||||||||  || || | |||||||||||||    
T  38296258 gcccccaacctccaacctcccattcacctcaccatatctcgccaccaacaccctataccaaaaactcctcctctccactaataaccgccaacaccatttc 38296357  T
Q  175 cctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccgacctccctccgagaacaaatag 247  Q
    ||||| || ||   |||||||||||||||||||||||| ||||| || ||   |||||||| |||||||||||    
T  38296358 cctaataacgcctcattaaactccctcaacctccgcactcccaaaccaccatactccctcctagaacaaatag 38296430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 55725315 - 55725145
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || |||||||||||||||||||| || | | | || || |      
T  55725315 ccaccaagaagaacaactccggcccccatcctccaaaccaccatcctccacaccatacctagccaccaacaccctataccataatccatctctatctact 55725216  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||||||||||||||||||||||  |||||||| ||||||||||  ||||||||||||||    
T  55725215 aacaacctccaacaccatttccctaacaaagcaaagttaaactctctcaacctcctaacacccaaccctcc 55725145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 47419335 - 47419505
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | ||||||||| |    
T  47419335 ccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaac 47419434  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| |||||||||||||| ||||||||||||| |||| | || |||||||||||    
T  47419435 aacaacctccaacaccatttacctaacaaagcaatgttaaactccctcagcctctgaacccccaaccctcc 47419505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 23642200 - 23642030
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | |||||||||      
T  23642200 ccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaat 23642101  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||||||||| ||||||||||||||||||   || |||||||||||    
T  23642100 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 23642030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 56337109 - 56336959
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||| |||| ||||||| |||||||||||||||| |||| ||||||||||||| |||||| | |  ||||||||||||||||   | || |||| |    
T  56337109 ccaccaagtagaaacactccgacccccaacctccaaccgcccagcctcctcaccatacctcgccgctagtaccctataccacaaacctactctatccacc 56337010  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||| |  |||||||| || ||||||||||||| |||||| |||||||||    
T  56337009 aacaaccgacaacaccactttcctaacaaagcaagattaaattccctcaac 56336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 48312625 - 48312792
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| || ||||||| || |||||||||||||||  ||||||    |||||||| |||    
T  48312625 ccaccacgaagaacaactccggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaa----cccctctctatc 48312720  T
Q  154 aacaaacacc----aacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccc 221  Q
    ||| |||| |    ||||||||||||||| ||||||||| |||||||| ||||| ||||| |||||||||||    
T  48312721 aactaacaaccgctaacaccatttccctagcaaagcaatgttaaactctctcaatctccgaacacccaaccc 48312792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 36183068 - 36183151
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  ||||||||||||||    
T  36183068 ccaccaagtagaaacactccggcccccaacctccaaccgcccatcctcctcaccatatcttgccacaagtaccctataccacaa 36183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 225
Target Start/End: Original strand, 46146200 - 46146379
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||| ||||||||||| |||| |||||||||||||  |||||| |  |||||| |  |||||||||| |||||||||||||||  |||||| | | | |    
T  46146200 atctcccgccaccaagatgaacaactccggcccccattctccaaaccaccatccgctgcaccatatctagccaccaacaccctacgccacaacccatctc 46146299  T
Q  146 tctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctccg 225  Q
    |||| |  ||||| |  ||||||||||| |||||||||||||| |||||| ||||||| ||||  ||||||| |||||||    
T  46146300 tctctactaacaaccttcaacaccattttcctaacaaagcaatgttaaaccccctcaatctcctaacacccatccctccg 46146379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 23647858 - 23647688
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | |||||||||      
T  23647858 ccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaat 23647759  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||||||||  | ||||||||||| ||||||||||||||||||   || |||||||||||    
T  23647758 aacaacctccaacaccatttatccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 23647688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 203
Target Start/End: Original strand, 9690953 - 9691102
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||  |||| ||||||||||||||||||||||||||||| |||||||||||||||| || || | |||||||||||| || | ||  || |||| |    
T  9690953 ccaccaatgagaaacactccggcccccaacctccaacctcccagcctcctcaccatatctagctactagcaccctataccaaaacccacatctatccacc 9691052  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaa 203  Q
    ||||| | |||||||||||| || ||||| |  | |||||| ||||||||    
T  9691053 aacaacctccaacaccatttacccaacaaggttaaattaaattccctcaa 9691102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 46 - 202
Target Start/End: Complemental strand, 29328395 - 29328238
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccc-caacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactaccc 144  Q
    ||||| ||||||||| |||||||||||||||| | | ||||||||||||||  ||||||||||||| ||||| ||||| ||| ||||||| ||||| | |    
T  29328395 atctcccgccaccaaaaagaaccactccggcctctccacctccaacctccccacctcctcaccatacctcgcgaccaagaccttataccaaaaactcctc 29328296  T
Q  145 ctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctca 202  Q
    | |||||  || || | ||||||||| || |||||||| |||  ||||||||||||||    
T  29328295 cgctccactaataaccgccaacaccactttcctaacaacgcatgattaaactccctca 29328238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 8935603 - 8935755
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||  | |||| ||||| |  || || || || |||||||| |||| |||||| ||||    
T  8935603 cgccaccaagaagaacaactccggcccccatcctccaacctcccacacacctcgccataacgagcgactaaaactctataccaaaaaccacccctatcca 8935702  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
      ||||  | |||||||||||||||||  || ||||||||||||||| |||||    
T  8935703 ctaacatcctccaacaccatttccctagtaaggcaatattaaactccttcaac 8935755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 19114965 - 19115117
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    |||||||||||||||| |||| |||||||||||||||||||||||    | || ||||| |  || || || || |||||||| || | |||||| ||||    
T  19114965 cgccaccaagaagaacaactctggcccccaacctccaacctcccacatacttcgccataacgagcgactaaaactctataccaaaatccacccctatcca 19115064  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
      ||||| | |||||||||||||||||| |||||||||||||||||| |||||    
T  19115065 ctaacaacctccaacaccatttccctaataaagcaatattaaactccttcaac 19115117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 204
Target Start/End: Original strand, 2072079 - 2072221
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||| ||||||| ||||||||||| |||||||   |||||||||||||||||||||||| ||||||||||||||  |  || || |||| |||||        
T  2072079 aagaaacactccgtcccccaacctctaacctccttgcctcctcaccatatctcgccaccagcaccctataccacatccctcctctatccaccaacatctg 2072178  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||| |||||||| ||||| ||||||||||||||  ||||||||    
T  2072179 ccatcaccatttacctaataaagcaatattaaatcccctcaac 2072221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 7099013 - 7099098
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaac 139  Q
    |||||||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||| || | ||| |||| |||||||||||    
T  7099013 ccaccaaatagaaccactccggcccccatcctccaacctctcatcctcctcaccatatctagctatcaaaacccgataccacaaac 7099098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 19162786 - 19162703
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||    |||||||||| || ||||||||||||||||||||    
T  19162786 ccaccaaaaagaaccactccggcccccatcctccaacctcccgtccctaacaccatatctagcaaccaacaccctataccacaa 19162703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 207
Target Start/End: Complemental strand, 1828157 - 1827996
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||| |||||||||||||||| ||||||||||||| || |||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | ||     
T  1828157 atctcccgccaccaagaagaacaactccggcccccatccgccaaacctccatcctccacaccatacctagccactaacaccttcctccacaaaacatcct 1828058  T
Q  146 tctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctc 207  Q
    ||||||  ||||| | ||||||||||||  | ||||||| ||| |||||||| |||||||||    
T  1828057 tctccaataacaaccgccaacaccatttatccaacaaagaaatgttaaactctctcaacctc 1827996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 9777909 - 9777990
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacc 143  Q
    ||||| |||||||||||||||||  |||||||||||||||||||| ||| | ||| ||||||||||||||||| | ||||||    
T  9777909 aagaaacactccggcccccaaccgtcaacctcccatcctcctcactataacgcgctaccaacaccctataccatatactacc 9777990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 54482768 - 54482605
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| |||||| |||||| ||||||| |  |||||  || ||||||| || |||||||||||||||  ||| ||    |||||||| |||    
T  54482768 ccaccacgaagaacaactccgacccccatcctccaaaccaccatctgccacaccatacctagccaccaacaccctacgccataa----cccctctctatc 54482673  T
Q  154 aacaaaca----ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacaccca 217  Q
    ||| ||||    ||||||||||||||||| ||||||||| |||||||| ||||| ||||| |||||||    
T  54482672 aactaacaaccgccaacaccatttccctagcaaagcaatgttaaactcgctcaatctccgaacaccca 54482605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 202
Target Start/End: Original strand, 2365537 - 2365685
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| |||||||||||||| |||||| ||| |||||||||  ||||||||||||| |  || ||||||||||||||||| ||||  || || || |      
T  2365537 ccaccatgaagaaccactccgacccccatccttcaacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 2365636  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctca 202  Q
    ||||  | ||| ||||||||  |||| ||||||||||||||||| ||||    
T  2365637 aacatcctccatcaccatttttctaataaagcaatattaaactctctca 2365685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 43516359 - 43516187
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    ||||||||||| ||| |||||| ||||||||||||||||| |||| ||  ||||||||| | | | || |  ||||||||||| |||| ||| || |||     
T  43516359 cgccaccaagatgaaacactcctgcccccaacctccaaccgcccagccgtctcaccataccgcactactaggaccctataccataaaccacctctatccg 43516260  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
     |||||    |||||||||||| |||||||||||| ||||||| |||  |||| ||| ||| |||||||||||    
T  43516259 ccaacatctgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaccctcc 43516187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 55299151 - 55299307
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaaca 161  Q
    ||||| ||||||||||||||||||||||||| ||| |    || ||||| || || || || |||| ||||||||||| ||| || |||| |||||  |     
T  55299151 aagaaacactccggcccccaacctccaacctgccacctaattcgccatacctggcgactaaaacccgataccacaaaccacctctatccaccaacatccg 55299250  T
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    |||||||||||| ||||||||||| | |||||||||| ||||  ||||||| |||||    
T  55299251 ccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcacccccaa 55299307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 40688597 - 40688680
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaa 137  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||    ||||||||||  | |||||||||| |||||||||    
T  40688597 ccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacaccatatctaccaaccaacacccgataccacaa 40688680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 3129528 - 3129454
Alignment:
Q  124 accctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactcc 198  Q
    |||||||||||||||| ||| || |||| |||||  | ||||||||||||||||||||||||| |||||||||||    
T  3129528 accctataccacaaaccacctctatccaccaacatccgccaacaccatttccctaacaaagcattattaaactcc 3129454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 208
Target Start/End: Complemental strand, 5789709 - 5789547
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |  ||| ||||| ||||||| || ||||| |||||| ||  |||||| |   | |    
T  5789709 atctcccgccaccaagaagaacaactccggcccccatcctccaaacctccaccctccacaccatacctagccactaacaccttacgccacaacccttcac 5789610  T
Q  146 tctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctcc 208  Q
    |||| |  ||||| | ||||||||| || || |||||||  | ||||||||||||||||||||    
T  5789609 tctctactaacaacctccaacaccactttcccaacaaagtgacattaaactccctcaacctcc 5789547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 19755798 - 19755968
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| || ||||||| || ||||| |||||| |   |||||||    |||||||||      
T  19755798 ccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacaccttcctccacaaagcttccctctccaat 19755897  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||||||||  | ||||||||||| |||||||| ||||||||    ||||||||||||||    
T  19755898 aacaaccgccaacaccatttatccaacaaagcaatgttaaactctctcaaccttgtaacacccaaccctcc 19755968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 19784008 - 19783838
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  |||||| || ||||||| || ||||| |||||| |   |||||||    |||||||||      
T  19784008 ccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacaccttcctccacaaagcttccctctccaat 19783909  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||||||||  | ||||||||||| |||||||| ||||||||    ||||||||||||||    
T  19783908 aacaaccgccaacaccatttatccaacaaagcaatgttaaactctctcaaccttgtaacacccaaccctcc 19783838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 41382498 - 41382560
Alignment:
Q  48 ctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccata 110  Q
    ||||| |||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  41382498 ctctctccaccaagtagaaacactccggcccccaacctccaaccgcccagcctcctcaccata 41382560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 218
Target Start/End: Original strand, 20675572 - 20675717
Alignment:
Q  73 cggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatt 172  Q
    |||||||||||||||||||| ||| |    || ||||| || || || || |||||||||||||||| ||| || |||| |||||  | |||||||||||    
T  20675572 cggcccccaacctccaacctgccacctatttcgccatacctggcgactaaaaccctataccacaaaccacctctgtccaccaacatccgccaacaccatt 20675671  T
Q  173 tccctaacaaagcaatattaaactccctcaacctccgcacacccaa 218  Q
    | ||||||||||| | |||||||||| ||||  ||||||| |||||    
T  20675672 ttcctaacaaagctaaattaaactccttcaatttccgcacccccaa 20675717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 51072205 - 51072148
Alignment:
Q  151 atcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctcc 208  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  51072205 atcaacatacaccaacaccatttccctaacagagcaacattaaactccctcatcctcc 51072148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 2631999 - 2632099
Alignment:
Q  124 accctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctc 223  Q
    |||||||||||||||| |||| | |||| |||||  | |||||||||||||||||||||| | | |||||||||| ||||  ||||||| ||||| ||||    
T  2631999 accctataccacaaaccacccttgtccaccaacatccgccaacaccatttccctaacaaaactaaattaaactccttcaatttccgcacccccaaacctc 2632098  T
Q  224 c 224  Q
    |    
T  2632099 c 2632099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 23657826 - 23657978
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctcca 151  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||  | |||| | ||| |  || || || || |||||||| |||| |||||| ||||    
T  23657826 cgccaccaagaagaacaacttcggcccccatcctccaacctcccacacacctcgctataacgggcgactaaaactctataccaaaaaccacccctatcca 23657925  T
Q  152 tcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
      ||||  |  ||||||||||||||||  || ||||||||||||||| |||||    
T  23657926 ctaacatccttcaacaccatttccctagtaaggcaatattaaactccttcaac 23657978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 49925878 - 49925834
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  49925878 cgccaccaagaagaacaactccggcccccaacctccaacctccca 49925834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 52617474 - 52617406
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaa 122  Q
    ||||||||| ||| |||||||||| | ||||||||||||| |  |||||||||||||||||||||||||    
T  52617474 ccaccaagatgaaacactccggcctctaacctccaacctctctgcctcctcaccatatctcgccaccaa 52617406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 4524236 - 4524194
Alignment:
Q  53 gccaccaagaagaaccactccggcccccaacctccaacctccc 95  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  4524236 gccaccaagaagaacaactccggcccccaacctccaacctccc 4524194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 42953006 - 42952944
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||  || |||||||||||    
T  42953006 ccaacaccatttacctaacaaagcaaaattaaactccctcaatctcctaacccccaaccctcc 42952944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 42778769 - 42778810
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccc 95  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  42778769 ccaccaagaagaacaactccggcccccaacctccaacctccc 42778810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 20396111 - 20396155
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||||| |||||||||||||| |||||||||||||    
T  20396111 cgccaccaagaagaacaactccggcccccaaactccaacctccca 20396155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 10562942 - 10562900
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  10562942 ccaccaagaagaacaactctggcccccaacctccaacctccca 10562900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 15740743 - 15740921
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccc 145  Q
    ||||| |||||||| ||||||| ||||||||||||| || |||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||    ||     
T  15740743 atctcccgccaccatgaagaacaactccggcccccatccgccaaacctccatcctccacaccatacctagccactaacacctttctccacaaaacttcct 15740842  T
Q  146 tctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||  ||||| |   |||||||||| || ||||||||||| ||||||||  ||||||||   || |||||||||||    
T  15740843 tctccaataacaaccgtaaacaccatttacccaacaaagcaatgttaaactctgtcaacctcgttacccccaaccctcc 15740921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 40434284 - 40434242
Alignment:
Q  98 cctcctcaccatatctcgccaccaacaccctataccacaaact 140  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  40434284 cctcctcaccgtacctcgccaccaacaccctataccacaaact 40434242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 7662844 - 7662767
Alignment:
Q  127 ctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||||||||||| ||| || |||| |||||  | |||||||||||| |||||||||||| ||||||| ||| |||||    
T  7662844 ctataccacaaaccacctctgtccaccaacatccgccaacaccatttacctaacaaagcactattaaattccttcaac 7662767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 48805517 - 48805562
Alignment:
Q  62 aagaaccactccggcccccaacctccaacctcccatcctcctcacc 107  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||    
T  48805517 aagaaccactccggcacccaatctccaacctcccatccacctcacc 48805562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 5726290 - 5726186
Alignment:
Q  94 ccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaa 193  Q
    ||||||||||||||||| || ||   |||||||||| |||| |||||  || |||||| |||||| | |||||||||||||| ||  | | |||||||||    
T  5726290 ccatcctcctcaccatagctagctgacaacaccctaaaccataaactctccttctccaccaacaaccgccaacaccatttccttagaagaacaatattaa 5726191  T
Q  194 actcc 198  Q
    |||||    
T  5726190 actcc 5726186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 13609928 - 13609992
Alignment:
Q  120 caacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaag 184  Q
    |||||||||| |||| |||||| |||||||||||||||  | ||||||||| |||||||| ||||    
T  13609928 caacaccctaaaccataaactatccctctccatcaacagcctccaacaccacttccctaataaag 13609992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 29553351 - 29553307
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||  |||||||||||||||||||| ||||||||||||||    
T  29553351 cgccaccacaaagaaccactccggcccccatcctccaacctccca 29553307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 53810374 - 53810414
Alignment:
Q  56 accaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  53810374 accaagaagaatcactccggccccccacctccaacctccca 53810414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 17402763 - 17402704
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccc 221  Q
    ||||||||| ||||| |  ||||||| |||||||||| |||||||||||||||| |||||    
T  17402763 ccaacaccacttccccagtaaagcaacattaaactccatcaacctccgcacacctaaccc 17402704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 19648238 - 19648273
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctcc 87  Q
    |||||||||||||||| |||||||||||||||||||    
T  19648238 cgccaccaagaagaacaactccggcccccaacctcc 19648273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 42953103 - 42953064
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctc 93  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  42953103 ccaccaagaagaacaactccggccccccacctccaacctc 42953064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 3694046 - 3694120
Alignment:
Q  120 caacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaa 194  Q
    |||||||||||||||||| ||  || ||||||||||||| | ||||||||| || || ||||||| || ||||||    
T  3694046 caacaccctataccacaagctctccttctccatcaacaacctccaacaccactttccaaacaaagaaaaattaaa 3694120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 26694567 - 26694629
Alignment:
Q  162 ccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    |||||||||||| ||||  |||||||||||||||||| |||| |||| ||| ||||| |||||    
T  26694567 ccaacaccatttacctagtaaagcaatattaaactccttcaatctcctcacccccaaacctcc 26694629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 19733499 - 19733422
Alignment:
Q  145 ctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccct 222  Q
    ||||| || ||||| | |||||||||||| ||||||||| || | |||||||||||||| ||||  ||||||| ||||    
T  19733499 ctctctattaacaacctccaacaccattttcctaacaaaacagtgttaaactccctcaatctcctaacacccatccct 19733422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 19735352 - 19735311
Alignment:
Q  46 atctctcgccaccaagaagaaccactccggcccccaacctcc 87  Q
    ||||| |||||||||||||||| ||||||||||||| |||||    
T  19735352 atctcccgccaccaagaagaacaactccggcccccatcctcc 19735311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 4551412 - 4551340
Alignment:
Q  67 ccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaac 139  Q
    ||||||| | ||||| |||| |||||| |||||||| ||||||| |  || ||||||||||||||||| ||||    
T  4551412 ccactccagtccccatcctctaacctctcatcctccacaccataacgagcaaccaacaccctataccaaaaac 4551340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 5760148 - 5760044
Alignment:
Q  94 ccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaa 193  Q
    |||||||||||| |||| || ||   |||||||||| |||| |||||  || |||||| |||||| | |||||||||||||| ||  | | |||||||||    
T  5760148 ccatcctcctcagcatacctagctgacaacaccctaaaccataaactctccttctccaccaacaaccgccaacaccatttccttagaagaacaatattaa 5760049  T
Q  194 actcc 198  Q
    |||||    
T  5760048 actcc 5760044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 19845684 - 19845588
Alignment:
Q  104 caccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccct 200  Q
    ||||||||| ||||||||  || ||| |||| |||||| ||||||||| |||||| | ||||||||| || ||||| | ||||   |||||||||||    
T  19845684 caccatatcacgccaccacgactctaaaccaaaaactatccctctccaccaacaaccgccaacaccacttacctaaaagagcatagttaaactccct 19845588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 25136049 - 25136105
Alignment:
Q  168 ccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||||| |  |||| ||||||||||||||||||||||  ||||||||| |||||    
T  25136049 ccatttccccattaaagaaatattaaactccctcaacctcttcacacccaaacctcc 25136105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 54685141 - 54685185
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatc 98  Q
    |||||||  |||||||||| |||||||| ||||||||||||||||    
T  54685141 ccaccaaatagaaccactctggcccccatcctccaacctcccatc 54685185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 34218 - 34070
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||||| |||  |||||||||||| ||||||||||||||   |||||||||||||||||| |||| |||||||||||| |||| | | ||||| | |    
T  34218 ccaccaagatgaagtactccggccccctacctccaacctccctgtctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctctctacc 34119  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctca 202  Q
    ||||  | |||||||| ||| |||||||||||| |||||||||||||||    
T  34118 aacattcgccaacaccttttacctaacaaagcactattaaactccctca 34070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 75 - 245
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||||||||| | ||| ||||||||| ||||||| |  ||||||||| ||||||| ||  ||||||||||| ||  |||||| | | | || || |      
T  75 ccaccaagaagagcaacttcggcccccatcctccaaaccaccatcctccacaccatacctaaccaccaacaccttacgccacaatccatctctatctact 174  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||    
T  175 aacaacctccaacaccatttccctaacaaagcaatgttaaactctctcaacctcctaacacccaaccctcc 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 105452 - 105282
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| ||||||| ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   |||||||  | |||||||||      
T  105452 ccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaat 105353  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||| | |||||||||||| || ||||||||||| ||||||||||||||||||   || |||||||||||    
T  105352 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 105282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 6613 - 6704
Alignment:
Q  48 ctctcgccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaac 139  Q
    ||||| |||||| || ||| |||||| |||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||||||||    
T  6613 ctctctccaccatgatgaagcactccagcccccaacctccaacctccctgcctcctcaccatatctcgccactaaaaccctataccacaaac 6704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 224
Target Start/End: Complemental strand, 63876 - 63738
Alignment:
Q  86 ccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagc 185  Q
    ||||||||||  |||||||| ||||||||||||||||||| |||||||| ||| || |  | ||||||||||  | ||||||||||||||||| ||||||    
T  63876 ccaacctccctgcctcctcatcatatctcgccaccaacactctataccaaaaattatctttgtccatcaacatccgccaacaccatttccctagcaaagc 63777  T
Q  186 aatattaaactccctcaacctccgcacacccaaccctcc 224  Q
     | ||||||||||||||||  ||  || |||||||||||    
T  63776 taaattaaactccctcaactgcctaacccccaaccctcc 63738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 134463 - 134313
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| | ||| ||||||||||||||||||||||||| ||| |    || ||||| || || || || |||||||||||||||| | | || |||| |    
T  134463 ccaccaacatgaaacactccggcccccaacctccaacctgccacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccacc 134364  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||  | ||||||||||||||||||||||||| ||||||||||| |||||    
T  134363 aacatccgccaacaccatttccctaacaaagcactattaaactccttcaac 134313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 312290 - 312140
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| | ||| ||||||||||||||||||||||||| ||| |    || ||||| || || || || |||||||||||||||| | | || |||| |    
T  312290 ccaccaacatgaaacactccggcccccaacctccaacctgccacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccacc 312191  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||  | ||||||||||||||||||||||||| ||||||||||| |||||    
T  312190 aacatccgccaacaccatttccctaacaaagcactattaaactccttcaac 312140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 327744 - 327594
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| | ||| ||||||||||||||||||||||||| ||| |    || ||||| || || || || |||||||||||||||| | | || |||| |    
T  327744 ccaccaacatgaaacactccggcccccaacctccaacctgccacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccacc 327645  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||  | ||||||||||||||||||||||||| ||||||||||| |||||    
T  327644 aacatccgccaacaccatttccctaacaaagcactattaaactccttcaac 327594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 67611 - 67691
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| || |  | |||||||||||||||    
T  67611 ccaccaagaagaaccactccagcccccaacctccaacctccctgcctcctcaccatacctagaaatcaacaccctatacca 67691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 203
Target Start/End: Original strand, 3783 - 3932
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    |||||| || |||| ||||||||||||||||||||| |  ||||||  | ||||||| || ||||| |||||| |   |||||||  | |||||||||      
T  3783 ccaccacgacgaacaactccggcccccaacctccaaacctccatccgtcacaccatacctagccactaacacctttctccacaaagcatccctctccaat 3882  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaa 203  Q
    ||||| | |||||||||||| || ||||||||||| ||||||||||||||    
T  3883 aacaaccgccaacaccatttacccaacaaagcaatgttaaactccctcaa 3932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0912 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0912
Description:

Target: scaffold0912; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 2484 - 2440
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  2484 cgccaccaagaagaacaactccggcccccaacctccaacctccca 2440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 8135 - 8285
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatc 153  Q
    ||||||| | ||| |||||||||||||||||||||| || ||| |    || ||||| || || || || || ||||||||||||| ||| || |||| |    
T  8135 ccaccaacacgaaacactccggcccccaacctccaatctgccacctaattcgccatacctagcaactaagacactataccacaaaccacctctgtccacc 8234  T
Q  154 aacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    ||||  | |||||||||||| |||||||||||| ||||||| ||| |||||    
T  8235 aacatccgccaacaccatttacctaacaaagcactattaaattccttcaac 8285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 4095 - 4015
Alignment:
Q  124 accctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactccctcaac 204  Q
    |||||||||||||||| | | || |||| |||||  | |||||||||||||||||||| |||| ||||||||||| |||||    
T  4095 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacagagcactattaaactccttcaac 4015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 182644 - 182688
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||||| |||||||||||||| |||||||||||||    
T  182644 cgccaccaagaagaacaactccggcccccaaactccaacctccca 182688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 86799 - 86728
Alignment:
Q  65 aaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccaca 136  Q
    |||||||| | |||||| ||||||||||||||  ||||||||||||||| || |||||||| | ||||||||    
T  86799 aaccactctgacccccatcctccaacctcccacactcctcaccatatctagcaaccaacactcgataccaca 86728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 8063 - 8105
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  8063 ccaccaagacgaacaactccggcccccaacctccaacctccca 8105  T

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Target: scaffold0179; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 12997 - 13039
Alignment:
Q  54 ccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  12997 ccaccaagacgaacaactccggcccccaacctccaacctccca 13039  T

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Target: scaffold0308 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 17782 - 17846
Alignment:
Q  160 caccaacaccatttccctaacaaagcaatattaaactccctcaacctccgcacacccaaccctcc 224  Q
    ||||||||||||||||||| ||| |||| |||||||||| ||||| |||  || |||||||||||    
T  17782 caccaacaccatttccctagcaatgcaacattaaactccttcaacttcctgacccccaaccctcc 17846  T

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Target: scaffold0308; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 17674 - 17718
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    |||||||||||||||| ||||| || ||| |||||||||||||||    
T  17674 cgccaccaagaagaacaactccagctccccacctccaacctccca 17718  T

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Target: scaffold0309 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 208
Target Start/End: Complemental strand, 850 - 740
Alignment:
Q  98 cctcctcaccatatctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaactc 197  Q
    ||||||| ||||||||||||  ||  || |||||||| |  | | |||| || ||||||| || ||||||||| |||||||| | ||||| |||||||||    
T  850 cctcctctccatatctcgccttcaggactctataccaaagtccatccctgtcaatcaacatacgccaacaccacttccctaatagagcaacattaaactc 751  T
Q  198 cctcaacctcc 208  Q
    ||||| |||||    
T  750 cctcatcctcc 740  T

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Target: scaffold0225 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 5635 - 5553
Alignment:
Q  112 ctcgccaccaacaccctataccacaaactacccctctccatcaacaaacaccaacaccatttccctaacaaagcaatattaaa 194  Q
    |||||| ||||||||||| ||||||||||  || |||||| |||||  | ||||||||| |||||||| ||||| | ||||||    
T  5635 ctcgccgccaacaccctaaaccacaaactctccttctccaccaacacccgccaacaccacttccctaataaagctaaattaaa 5553  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 611 - 570
Alignment:
Q  93 cccatcctcctcaccatatctcgccaccaacaccctatacca 134  Q
    |||| ||||||||||||| |||||||| ||||||||||||||    
T  611 cccaacctcctcaccatacctcgccactaacaccctatacca 570  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 15261 - 15217
Alignment:
Q  52 cgccaccaagaagaaccactccggcccccaacctccaacctccca 96  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||||    
T  15261 cgccaccaagaagaaacactccggccccccacctccttcctccca 15217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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