View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19445_low_61 (Length: 252)
Name: NF19445_low_61
Description: NF19445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19445_low_61 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 1759675 - 1759921
Alignment:
| Q |
6 |
agtagggacatgagagaaataaagcaagtaaaaagcttaaataatagtttcgatattccatttttgatatgatattcctgatttggcttgtgatgaccaa |
105 |
Q |
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| T |
1759675 |
agtagggacatgagagaaataaagcaagtaaaaagcttaaataatagtttcgatattccatttttgatatgatattcctgatttggcttgtgatgaccaa |
1759774 |
T |
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| Q |
106 |
ggatgctatatataggggtcatggcttgatttgaaatttctatatttgagtttcttaaattttcctgcatttaagaaaaactttatcaataaagagaaaa |
205 |
Q |
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| T |
1759775 |
ggatgctatatataggggtcatggcttgatttgaaatttctatatttgagtttcttaaattttcctgcatttaagaaaaactttatcaataaagagaaaa |
1759874 |
T |
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| Q |
206 |
tggtgtgtatgtgactttttgacatgttgcaaagacaaaagttctct |
252 |
Q |
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| T |
1759875 |
tggtgtgtatgtgactttttgacatgttgcgaagacaaaagttctct |
1759921 |
T |
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