View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19447_high_2 (Length: 466)

Name: NF19447_high_2
Description: NF19447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19447_high_2
NF19447_high_2
[»] chr5 (61 HSPs)
chr5 (14-219)||(40800908-40801118)
chr5 (267-381)||(9530363-9530477)
chr5 (267-380)||(33001739-33001852)
chr5 (267-382)||(13589156-13589271)
chr5 (270-383)||(10688392-10688505)
chr5 (267-388)||(25684067-25684188)
chr5 (267-385)||(2148418-2148536)
chr5 (267-380)||(16729726-16729839)
chr5 (267-379)||(23189359-23189471)
chr5 (267-382)||(15725945-15726060)
chr5 (267-382)||(37314129-37314244)
chr5 (267-379)||(42534685-42534797)
chr5 (267-382)||(22279508-22279622)
chr5 (267-383)||(28770238-28770352)
chr5 (267-382)||(31236881-31236996)
chr5 (267-383)||(22798359-22798478)
chr5 (267-382)||(10453280-10453395)
chr5 (267-382)||(41631218-41631333)
chr5 (267-379)||(40340430-40340543)
chr5 (267-383)||(39541011-39541127)
chr5 (267-382)||(19125912-19126027)
chr5 (267-382)||(32624176-32624291)
chr5 (313-382)||(11758612-11758681)
chr5 (267-383)||(4094657-4094773)
chr5 (267-379)||(8068611-8068722)
chr5 (267-383)||(3881831-3881946)
chr5 (267-382)||(37963276-37963391)
chr5 (383-451)||(40801110-40801176)
chr5 (307-368)||(32063858-32063919)
chr5 (219-270)||(9530719-9530770)
chr5 (267-343)||(43411808-43411884)
chr5 (218-270)||(13588862-13588914)
chr5 (273-384)||(34859733-34859841)
chr5 (219-269)||(42534392-42534442)
chr5 (222-269)||(16730081-16730128)
chr5 (219-270)||(22279216-22279267)
chr5 (218-269)||(25684421-25684472)
chr5 (218-269)||(40340786-40340837)
chr5 (224-269)||(8068323-8068368)
chr5 (220-269)||(31236588-31236637)
chr5 (224-269)||(32063529-32063574)
chr5 (220-269)||(39540719-39540768)
chr5 (220-269)||(43411517-43411566)
chr5 (221-269)||(4095016-4095064)
chr5 (229-269)||(22798076-22798116)
chr5 (221-269)||(28769947-28769995)
chr5 (218-269)||(15726283-15726334)
chr5 (342-385)||(27353418-27353461)
chr5 (319-385)||(6560823-6560888)
chr5 (219-269)||(10453638-10453688)
chr5 (219-257)||(23189066-23189104)
chr5 (319-384)||(6114118-6114182)
chr5 (337-386)||(32993688-32993737)
chr5 (319-384)||(34302644-34302708)
chr5 (267-295)||(6335477-6335505)
chr5 (268-296)||(10118537-10118565)
chr5 (267-295)||(12336300-12336328)
chr5 (267-295)||(13593573-13593601)
chr5 (337-381)||(27979014-27979058)
chr5 (267-295)||(32063817-32063845)
chr5 (334-382)||(43237712-43237759)
[»] chr3 (65 HSPs)
chr3 (267-384)||(54008903-54009020)
chr3 (267-386)||(52782451-52782570)
chr3 (267-390)||(44962594-44962717)
chr3 (267-386)||(1326597-1326716)
chr3 (268-382)||(32719985-32720099)
chr3 (267-383)||(55365666-55365783)
chr3 (267-387)||(2667479-2667599)
chr3 (267-383)||(33830529-33830645)
chr3 (267-383)||(48925703-48925819)
chr3 (267-382)||(7157330-7157445)
chr3 (267-382)||(37567218-37567333)
chr3 (267-382)||(45927220-45927335)
chr3 (267-389)||(9322725-9322847)
chr3 (267-384)||(44500407-44500524)
chr3 (307-386)||(52788755-52788834)
chr3 (271-384)||(26409915-26410028)
chr3 (267-384)||(53186002-53186119)
chr3 (267-383)||(346689-346805)
chr3 (267-382)||(48389050-48389166)
chr3 (267-382)||(49951217-49951332)
chr3 (267-382)||(50560653-50560768)
chr3 (267-369)||(53376604-53376706)
chr3 (307-383)||(54011141-54011217)
chr3 (273-380)||(50465473-50465580)
chr3 (267-353)||(14460210-14460296)
chr3 (313-383)||(35320700-35320770)
chr3 (267-343)||(36019708-36019784)
chr3 (267-343)||(48990351-48990427)
chr3 (217-269)||(36019413-36019465)
chr3 (217-269)||(52782156-52782208)
chr3 (267-343)||(51235558-51235636)
chr3 (220-269)||(35320360-35320409)
chr3 (268-383)||(42622608-42622725)
chr3 (220-269)||(51235879-51235928)
chr3 (221-269)||(35352191-35352239)
chr3 (218-269)||(32720344-32720395)
chr3 (210-269)||(53376948-53377007)
chr3 (219-269)||(14460542-14460592)
chr3 (267-386)||(23043644-23043762)
chr3 (220-266)||(49950924-49950970)
chr3 (219-269)||(50465830-50465880)
chr3 (337-386)||(7352529-7352578)
chr3 (220-269)||(33830888-33830937)
chr3 (218-270)||(7157036-7157088)
chr3 (319-383)||(11140246-11140309)
chr3 (338-382)||(16136985-16137029)
chr3 (319-383)||(26885315-26885379)
chr3 (334-382)||(43715107-43715154)
chr3 (218-270)||(54009263-54009315)
chr3 (267-298)||(881808-881839)
chr3 (319-386)||(29491659-29491726)
chr3 (319-382)||(42364271-42364333)
chr3 (336-382)||(19547489-19547534)
chr3 (334-392)||(35749272-35749330)
chr3 (219-269)||(44500134-44500184)
chr3 (219-269)||(45927578-45927628)
chr3 (223-269)||(48388762-48388808)
chr3 (220-269)||(37567576-37567625)
chr3 (220-269)||(48925411-48925460)
chr3 (267-299)||(7347173-7347205)
chr3 (319-383)||(9506902-9506966)
chr3 (319-383)||(9514877-9514941)
chr3 (319-387)||(40477752-40477820)
chr3 (319-383)||(42067578-42067641)
chr3 (229-269)||(48990652-48990692)
[»] chr2 (60 HSPs)
chr2 (267-384)||(1859925-1860042)
chr2 (267-383)||(6657442-6657558)
chr2 (267-384)||(7504315-7504433)
chr2 (268-382)||(41839654-41839768)
chr2 (267-388)||(26738026-26738147)
chr2 (267-383)||(37725550-37725666)
chr2 (267-384)||(39879211-39879328)
chr2 (267-392)||(40533241-40533366)
chr2 (267-382)||(36947774-36947889)
chr2 (267-382)||(490026-490140)
chr2 (267-385)||(45555379-45555497)
chr2 (267-392)||(21425202-21425327)
chr2 (267-383)||(2317130-2317246)
chr2 (273-392)||(13568510-13568629)
chr2 (267-388)||(18009246-18009367)
chr2 (267-379)||(33424024-33424137)
chr2 (267-382)||(3724233-3724348)
chr2 (267-382)||(10711277-10711392)
chr2 (267-382)||(35292510-35292624)
chr2 (267-385)||(33716586-33716704)
chr2 (267-382)||(21836336-21836454)
chr2 (267-362)||(36192262-36192357)
chr2 (267-380)||(5085131-5085243)
chr2 (307-383)||(18576643-18576719)
chr2 (267-381)||(16815142-16815256)
chr2 (267-382)||(14819916-14820031)
chr2 (267-363)||(28394087-28394185)
chr2 (307-381)||(16854339-16854413)
chr2 (267-379)||(44068052-44068163)
chr2 (219-270)||(7504021-7504072)
chr2 (313-382)||(36049804-36049873)
chr2 (216-269)||(40533609-40533662)
chr2 (218-270)||(6657802-6657854)
chr2 (217-269)||(37725909-37725961)
chr2 (211-269)||(13568203-13568261)
chr2 (217-271)||(41840010-41840064)
chr2 (220-269)||(2316838-2316887)
chr2 (220-269)||(3723941-3723990)
chr2 (220-269)||(18576300-18576349)
chr2 (220-269)||(19635993-19636042)
chr2 (220-269)||(19834586-19834635)
chr2 (221-269)||(28394426-28394474)
chr2 (319-382)||(11227627-11227689)
chr2 (218-269)||(16814849-16814900)
chr2 (218-269)||(16854129-16854180)
chr2 (220-266)||(1860288-1860334)
chr2 (216-269)||(18008951-18009004)
chr2 (220-269)||(36049464-36049513)
chr2 (220-269)||(36947482-36947531)
chr2 (219-271)||(39878918-39878970)
chr2 (222-269)||(21836643-21836690)
chr2 (219-269)||(5084838-5084888)
chr2 (336-382)||(6945340-6945386)
chr2 (219-269)||(10711634-10711684)
chr2 (220-270)||(26738389-26738439)
chr2 (334-383)||(4673961-4674009)
chr2 (314-379)||(5615378-5615442)
chr2 (318-382)||(15206079-15206143)
chr2 (319-383)||(42849671-42849735)
chr2 (268-296)||(43359189-43359217)
[»] scaffold0121 (2 HSPs)
scaffold0121 (267-383)||(13602-13718)
scaffold0121 (217-270)||(13960-14013)
[»] chr7 (47 HSPs)
chr7 (267-383)||(2038387-2038503)
chr7 (271-387)||(1282180-1282296)
chr7 (267-383)||(18922575-18922691)
chr7 (267-382)||(24505123-24505238)
chr7 (267-386)||(42039298-42039417)
chr7 (267-383)||(15090667-15090783)
chr7 (267-383)||(45197096-45197212)
chr7 (267-382)||(25866905-25867020)
chr7 (267-382)||(32186717-32186832)
chr7 (267-382)||(41715433-41715548)
chr7 (267-386)||(42902678-42902797)
chr7 (267-384)||(7574406-7574523)
chr7 (267-383)||(40947265-40947381)
chr7 (267-382)||(3061902-3062017)
chr7 (267-382)||(17334739-17334853)
chr7 (267-382)||(47069253-47069368)
chr7 (267-382)||(47219956-47220070)
chr7 (273-382)||(27130840-27130950)
chr7 (267-380)||(33704840-33704952)
chr7 (267-343)||(39444004-39444080)
chr7 (216-269)||(45196800-45196853)
chr7 (267-332)||(9923120-9923185)
chr7 (218-269)||(9915516-9915567)
chr7 (218-269)||(9923428-9923479)
chr7 (218-269)||(24505481-24505532)
chr7 (218-269)||(42039660-42039711)
chr7 (219-269)||(3062251-3062301)
chr7 (336-382)||(17340794-17340839)
chr7 (220-269)||(1282543-1282592)
chr7 (221-269)||(25867263-25867311)
chr7 (219-270)||(17335094-17335145)
chr7 (220-269)||(18922934-18922983)
chr7 (233-269)||(41715152-41715188)
chr7 (219-270)||(2038094-2038145)
chr7 (334-385)||(27800387-27800437)
chr7 (218-269)||(32186421-32186472)
chr7 (268-298)||(16200821-16200851)
chr7 (337-383)||(35357700-35357746)
chr7 (337-382)||(6791799-6791844)
chr7 (334-391)||(30624082-30624138)
chr7 (319-392)||(41913438-41913509)
chr7 (268-296)||(8648330-8648358)
chr7 (220-256)||(15091038-15091074)
chr7 (340-388)||(15954125-15954173)
chr7 (268-296)||(22904785-22904813)
chr7 (267-295)||(27427424-27427452)
chr7 (319-379)||(28326684-28326743)
[»] chr4 (50 HSPs)
chr4 (267-387)||(33612518-33612638)
chr4 (267-383)||(10779283-10779399)
chr4 (267-385)||(54499572-54499689)
chr4 (267-379)||(23639527-23639639)
chr4 (267-383)||(36569647-36569763)
chr4 (267-383)||(45629107-45629223)
chr4 (267-384)||(21514987-21515104)
chr4 (267-383)||(16004825-16004941)
chr4 (267-382)||(42244829-42244944)
chr4 (267-382)||(48549958-48550073)
chr4 (267-382)||(24291978-24292092)
chr4 (267-385)||(46222284-46222404)
chr4 (267-385)||(44998408-44998525)
chr4 (267-386)||(46630937-46631057)
chr4 (267-384)||(27967507-27967625)
chr4 (267-380)||(46633895-46634009)
chr4 (267-385)||(38955334-38955454)
chr4 (267-385)||(27635736-27635854)
chr4 (271-385)||(52257129-52257243)
chr4 (267-382)||(54505857-54505973)
chr4 (313-379)||(23645231-23645297)
chr4 (267-384)||(42680882-42680999)
chr4 (267-382)||(56016796-56016911)
chr4 (327-383)||(10972952-10973008)
chr4 (47-175)||(9813613-9813743)
chr4 (220-270)||(33612880-33612930)
chr4 (267-382)||(2526171-2526286)
chr4 (219-269)||(2526529-2526579)
chr4 (219-269)||(10778990-10779040)
chr4 (219-269)||(38955041-38955091)
chr4 (220-269)||(42244537-42244586)
chr4 (220-269)||(44998768-44998817)
chr4 (319-391)||(48066349-48066420)
chr4 (319-382)||(3716325-3716387)
chr4 (218-269)||(46630643-46630694)
chr4 (218-269)||(48549662-48549713)
chr4 (220-266)||(16004533-16004579)
chr4 (219-269)||(27967868-27967918)
chr4 (268-357)||(16601634-16601724)
chr4 (220-269)||(36570006-36570055)
chr4 (317-385)||(19842435-19842502)
chr4 (221-269)||(21515347-21515395)
chr4 (319-382)||(41760005-41760067)
chr4 (267-298)||(42080619-42080650)
chr4 (319-385)||(352816-352882)
chr4 (337-383)||(3763114-3763160)
chr4 (336-382)||(33491522-33491568)
chr4 (337-383)||(50732860-50732906)
chr4 (267-299)||(39412461-39412493)
chr4 (267-295)||(45754468-45754496)
[»] chr6 (31 HSPs)
chr6 (267-383)||(9226199-9226315)
chr6 (267-381)||(35225122-35225236)
chr6 (267-384)||(32519024-32519141)
chr6 (267-385)||(16989404-16989522)
chr6 (267-384)||(18870920-18871038)
chr6 (267-382)||(1338853-1338969)
chr6 (267-383)||(6016096-6016212)
chr6 (267-383)||(34315416-34315530)
chr6 (267-385)||(26810774-26810892)
chr6 (267-385)||(27719296-27719422)
chr6 (267-382)||(24025531-24025646)
chr6 (267-354)||(33954480-33954566)
chr6 (406-451)||(18701801-18701846)
chr6 (267-343)||(34969491-34969567)
chr6 (219-270)||(34315123-34315174)
chr6 (216-266)||(1339215-1339265)
chr6 (220-269)||(34969790-34969839)
chr6 (219-270)||(24025791-24025842)
chr6 (267-351)||(29639026-29639110)
chr6 (218-269)||(35224827-35224878)
chr6 (220-266)||(18871284-18871330)
chr6 (268-386)||(21181135-21181253)
chr6 (220-269)||(29638734-29638783)
chr6 (218-258)||(9226570-9226610)
chr6 (337-382)||(8549916-8549961)
chr6 (334-390)||(1705598-1705653)
chr6 (267-295)||(11273708-11273736)
chr6 (267-295)||(14715558-14715586)
chr6 (267-295)||(24151417-24151445)
chr6 (221-257)||(32518748-32518784)
chr6 (319-383)||(32834118-32834181)
[»] chr1 (92 HSPs)
chr1 (267-383)||(48480849-48480965)
chr1 (267-385)||(3150477-3150595)
chr1 (267-380)||(17376357-17376470)
chr1 (267-382)||(5057199-5057314)
chr1 (267-386)||(33829157-33829276)
chr1 (267-386)||(33838690-33838809)
chr1 (267-384)||(14190888-14191005)
chr1 (267-383)||(7426952-7427068)
chr1 (267-383)||(25493497-25493613)
chr1 (267-382)||(10061157-10061272)
chr1 (267-382)||(24248094-24248209)
chr1 (267-382)||(29171165-29171280)
chr1 (267-382)||(43224937-43225052)
chr1 (267-377)||(52274011-52274121)
chr1 (267-380)||(8569268-8569381)
chr1 (268-383)||(1658833-1658948)
chr1 (267-382)||(27801810-27801925)
chr1 (273-380)||(47861024-47861131)
chr1 (271-385)||(9260112-9260226)
chr1 (267-383)||(40850022-40850136)
chr1 (267-382)||(48868355-48868470)
chr1 (267-385)||(49739140-49739258)
chr1 (267-380)||(39852959-39853072)
chr1 (267-382)||(9223146-9223262)
chr1 (269-380)||(22821249-22821361)
chr1 (267-379)||(44647537-44647649)
chr1 (267-383)||(46872368-46872484)
chr1 (267-382)||(27038543-27038658)
chr1 (267-384)||(28095040-28095156)
chr1 (267-383)||(50502636-50502756)
chr1 (267-357)||(31571261-31571351)
chr1 (267-383)||(37765545-37765662)
chr1 (267-379)||(41321008-41321120)
chr1 (267-382)||(33234346-33234461)
chr1 (267-382)||(2684011-2684125)
chr1 (267-381)||(20280223-20280336)
chr1 (316-382)||(14131690-14131756)
chr1 (267-380)||(10635688-10635802)
chr1 (322-383)||(49685984-49686045)
chr1 (267-383)||(52079440-52079558)
chr1 (216-270)||(5057556-5057610)
chr1 (47-155)||(2248968-2249080)
chr1 (216-270)||(1658545-1658599)
chr1 (220-270)||(48481206-48481256)
chr1 (218-269)||(10061515-10061566)
chr1 (218-269)||(14131350-14131401)
chr1 (268-382)||(41550439-41550550)
chr1 (216-270)||(29207615-29207669)
chr1 (220-269)||(37765253-37765302)
chr1 (221-269)||(31015889-31015937)
chr1 (221-269)||(31570972-31571020)
chr1 (217-269)||(48868059-48868111)
chr1 (222-269)||(9222856-9222903)
chr1 (336-383)||(24230931-24230978)
chr1 (218-269)||(29171523-29171574)
chr1 (267-343)||(33771936-33772011)
chr1 (218-269)||(39853317-39853368)
chr1 (218-269)||(40850379-40850430)
chr1 (218-269)||(47860753-47860804)
chr1 (218-269)||(49289227-49289278)
chr1 (219-269)||(3150184-3150234)
chr1 (220-266)||(43224645-43224691)
chr1 (219-269)||(52273718-52273768)
chr1 (220-269)||(2684326-2684375)
chr1 (220-269)||(9259816-9259865)
chr1 (267-329)||(31016159-31016221)
chr1 (220-269)||(50502344-50502393)
chr1 (223-266)||(27038904-27038947)
chr1 (317-384)||(34256451-34256517)
chr1 (222-269)||(44647247-44647294)
chr1 (319-382)||(51787812-51787875)
chr1 (268-298)||(22864753-22864783)
chr1 (337-383)||(32710106-32710152)
chr1 (337-383)||(34038526-34038572)
chr1 (219-269)||(41321363-41321413)
chr1 (268-298)||(48313601-48313631)
chr1 (337-382)||(477796-477841)
chr1 (319-384)||(16482574-16482638)
chr1 (337-386)||(17554179-17554228)
chr1 (317-382)||(31075952-31076017)
chr1 (220-269)||(52079790-52079839)
chr1 (267-295)||(5957550-5957578)
chr1 (268-296)||(13216389-13216417)
chr1 (319-383)||(31931042-31931105)
chr1 (334-382)||(37498744-37498791)
chr1 (319-383)||(38260801-38260865)
chr1 (268-296)||(41568530-41568558)
chr1 (268-296)||(43536962-43536990)
chr1 (268-296)||(46282027-46282055)
chr1 (267-295)||(50534176-50534204)
chr1 (280-388)||(50631897-50632005)
chr1 (319-379)||(51781448-51781507)
[»] scaffold0022 (2 HSPs)
scaffold0022 (267-384)||(166709-166826)
scaffold0022 (219-269)||(166418-166468)
[»] chr8 (51 HSPs)
chr8 (267-385)||(12266368-12266486)
chr8 (267-384)||(45393738-45393855)
chr8 (267-382)||(28897195-28897310)
chr8 (267-389)||(27101103-27101226)
chr8 (267-385)||(45401145-45401263)
chr8 (267-388)||(37404894-37405015)
chr8 (267-383)||(21835430-21835546)
chr8 (267-379)||(36835345-36835457)
chr8 (267-379)||(37766594-37766706)
chr8 (267-382)||(196357-196471)
chr8 (267-382)||(311194-311308)
chr8 (267-382)||(3052799-3052914)
chr8 (267-382)||(29039904-29040019)
chr8 (267-382)||(7223489-7223598)
chr8 (267-383)||(38971463-38971579)
chr8 (267-383)||(39002561-39002677)
chr8 (267-382)||(1426620-1426735)
chr8 (316-382)||(14914154-14914220)
chr8 (267-380)||(464250-464364)
chr8 (313-382)||(29565687-29565756)
chr8 (267-382)||(38803434-38803549)
chr8 (267-343)||(38627026-38627102)
chr8 (267-350)||(18844451-18844534)
chr8 (267-349)||(43183017-43183098)
chr8 (268-380)||(41572002-41572113)
chr8 (222-270)||(12266073-12266121)
chr8 (219-269)||(28896904-28896954)
chr8 (220-269)||(36835700-36835749)
chr8 (319-383)||(15726234-15726297)
chr8 (221-269)||(35037821-35037869)
chr8 (222-269)||(7223841-7223888)
chr8 (219-269)||(14913843-14913893)
chr8 (220-269)||(196066-196115)
chr8 (220-269)||(310903-310952)
chr8 (216-269)||(38971822-38971875)
chr8 (216-269)||(39002920-39002973)
chr8 (268-299)||(5982479-5982510)
chr8 (319-385)||(17642071-17642136)
chr8 (317-383)||(19718693-19718758)
chr8 (319-380)||(1043060-1043121)
chr8 (220-269)||(1426327-1426376)
chr8 (217-269)||(21835788-21835841)
chr8 (319-383)||(29454553-29454617)
chr8 (319-383)||(29773444-29773507)
chr8 (267-295)||(34058122-34058150)
chr8 (268-296)||(36569942-36569970)
chr8 (319-383)||(42444562-42444625)
chr8 (267-295)||(43331830-43331858)
chr8 (267-295)||(44309652-44309680)
chr8 (268-296)||(44637213-44637241)
chr8 (217-269)||(45393443-45393495)
[»] scaffold1999 (1 HSPs)
scaffold1999 (267-382)||(1003-1118)
[»] scaffold0239 (2 HSPs)
scaffold0239 (267-382)||(15380-15495)
scaffold0239 (217-269)||(15739-15791)
[»] scaffold0349 (1 HSPs)
scaffold0349 (267-385)||(8718-8844)
[»] scaffold0194 (1 HSPs)
scaffold0194 (267-382)||(17786-17900)
[»] scaffold0005 (1 HSPs)
scaffold0005 (267-382)||(291623-291738)
[»] scaffold0301 (1 HSPs)
scaffold0301 (273-383)||(21459-21567)
[»] scaffold0017 (1 HSPs)
scaffold0017 (307-380)||(26974-27047)
[»] scaffold0493 (2 HSPs)
scaffold0493 (267-385)||(1378-1497)
scaffold0493 (220-269)||(1745-1794)
[»] scaffold0184 (1 HSPs)
scaffold0184 (337-382)||(16944-16989)
[»] scaffold0078 (1 HSPs)
scaffold0078 (337-382)||(55855-55900)
[»] scaffold0060 (1 HSPs)
scaffold0060 (319-383)||(45760-45824)


Alignment Details
Target: chr5 (Bit Score: 159; Significance: 2e-84; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 40800908 - 40801118
Alignment:
Q  14 ttctccatattatctctcggtctctttctaattcttttatgttgttgtttgcatgtgatttgagtccttattccataattgtcgcaaagggt-----gaa 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||    
T  40800908 ttctccatattatctctcggtctctttctaatccttttatgttgttgtttgcatgtgatttgagtccttattccataattgtcgcaaagggtgaaaggaa 40801007  T
Q  109 atggcgaagaggaaaggaagatggttacatattagtaaatatggttttaagatgcttgaagttttcatgtatgtttgatgttcaataaatatctaacttc 208  Q
    | | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  40801008 acgacgaagaggaaaggaagatggttacatattagtaaatatggtttaaagatgcttgaagttttcaagtatatttgatgctcaataaatatctaacttc 40801107  T
Q  209 cattaacataa 219  Q
    | |||||||||    
T  40801108 ctttaacataa 40801118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 267 - 381
Target Start/End: Complemental strand, 9530477 - 9530363
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9530477 gttgtcaatgatagaaaataattatttttcttcaaaaaaataactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 9530378  T
Q  367 taccatagaatttgc 381  Q
    |||||||||||||||    
T  9530377 taccatagaatttgc 9530363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 267 - 380
Target Start/End: Original strand, 33001739 - 33001852
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33001739 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgggtg 33001838  T
Q  367 taccatagaatttg 380  Q
    ||||||||||||||    
T  33001839 taccatagaatttg 33001852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 13589156 - 13589271
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  13589156 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacaacttggtgtaccgatacacccaaattcattgggtg 13589255  T
Q  367 taccatagaatttgcc 382  Q
    |||| |||||||||||    
T  13589256 taccgtagaatttgcc 13589271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 10688505 - 10688392
Alignment:
Q  270 gtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtac 369  Q
    ||||||||||||||||||||||||||||||       ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10688505 gtcaatgatagaaaataattatttttcttcaaaaaagcaaatcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtac 10688406  T
Q  370 catagaatttgcct 383  Q
    ||||||||||||||    
T  10688405 catagaatttgcct 10688392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 267 - 388
Target Start/End: Complemental strand, 25684188 - 25684067
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||    
T  25684188 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgatacacccaaatttattgggtg 25684089  T
Q  367 taccatagaatttgccttaata 388  Q
    ||||||||||||||||| ||||    
T  25684088 taccatagaatttgcctaaata 25684067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 2148418 - 2148536
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||    
T  2148418 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccgatacacccaaatttattgggtg 2148517  T
Q  367 taccatagaatttgcctta 385  Q
    ||||| |||||||||||||    
T  2148518 taccaaagaatttgcctta 2148536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 267 - 380
Target Start/End: Complemental strand, 16729839 - 16729726
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  16729839 gttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccgatacatccaaatttattggatg 16729740  T
Q  367 taccatagaatttg 380  Q
    ||||||||||||||    
T  16729739 taccatagaatttg 16729726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 267 - 379
Target Start/End: Original strand, 23189359 - 23189471
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| ||    
T  23189359 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccgatacacccaaatttattgggtg 23189458  T
Q  367 taccatagaattt 379  Q
    |||||||||||||    
T  23189459 taccatagaattt 23189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 15726060 - 15725945
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||    
T  15726060 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcgatacacccaaatttattgggtg 15725961  T
Q  367 taccatagaatttgcc 382  Q
    ||||||| ||||||||    
T  15725960 taccataaaatttgcc 15725945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 37314129 - 37314244
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||||| ||    
T  37314129 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttaggacttagtgtaccgatacacccaaatttattgggtg 37314228  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  37314229 taccatagaatttgcc 37314244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 267 - 379
Target Start/End: Original strand, 42534685 - 42534797
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||| |||||||||||||||||||||||||||||| || || ||    
T  42534685 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattctacgacttggtgtaccgatacacccaaatttatagggtg 42534784  T
Q  367 taccatagaattt 379  Q
    |||||||||||||    
T  42534785 taccatagaattt 42534797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 22279508 - 22279622
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||| |||||||||||||       ||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| ||    
T  22279508 gttgtcaatgatagaaaattattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccggtacacccaaattcattgg-tg 22279606  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  22279607 taccatagaatttgcc 22279622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 28770238 - 28770352
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||    
T  28770238 gttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtactgatacacccaaatttattgg-tg 28770335  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  28770336 taccatagaatttgcct 28770352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 31236881 - 31236996
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||| ||||||||||||       ||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||    
T  31236881 gttgtcaatgatagaaaatagttatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccgatacatccaaatttattgggtg 31236980  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  31236981 taccatagaatttgcc 31236996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 22798359 - 22798478
Alignment:
Q  267 gttgtcaatgatagaaaata---attatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgg 363  Q
    ||||||||||||||||||||   |||||||||||||       ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  22798359 gttgtcaatgatagaaaatagtaattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtaccgatacacccaaatttattgg 22798458  T
Q  364 atgtaccatagaatttgcct 383  Q
     |||||||||||||||||||    
T  22798459 gtgtaccatagaatttgcct 22798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 10453395 - 10453280
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||| |||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| | ||    
T  10453395 gttgtcaataatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgatacacccaaatttatttggtg 10453296  T
Q  367 taccatagaatttgcc 382  Q
    |||| |||||||||||    
T  10453295 taccgtagaatttgcc 10453280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 41631333 - 41631218
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||| ||||||||||||||||||||        ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||    
T  41631333 gttgtcaatgaaagaaaataattatttttctttaaaaaaacaacttatttattattaattttacgacttggtgtaccgatacacctaaatttattgggtg 41631234  T
Q  367 taccatagaatttgcc 382  Q
    ||||||| ||||||||    
T  41631233 taccataaaatttgcc 41631218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 267 - 379
Target Start/End: Complemental strand, 40340543 - 40340430
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||| |    
T  40340543 gttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttatgacttggtgtaacgatacacccaaatttattgggt 40340444  T
Q  366 gtaccatagaattt 379  Q
    ||||||||||||||    
T  40340443 gtaccatagaattt 40340430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 39541011 - 39541127
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||| || |||||||| ||||||| ||||||| ||||| ||    
T  39541011 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgatttggtgtatcgatacatccaaatttattgggtg 39541110  T
Q  367 taccatagaatttgcct 383  Q
    ||| |||||||||||||    
T  39541111 tacaatagaatttgcct 39541127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 19126027 - 19125912
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        || | ||||||||||||||||| |||||| | |||||||||||| ||||| ||||||||    
T  19126027 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaattcatttattattaattttatgacttgatataccgatacacctaaatttattggatg 19125928  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  19125927 taccatagaatttgcc 19125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 32624291 - 32624176
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        || | ||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||    
T  32624291 gttgtcaatgatagaaaataattatttttcttcaaaaaaataattaatttattattaatttaacgaattggtgtaccgatacacccaaatttattgggtg 32624192  T
Q  367 taccatagaatttgcc 382  Q
    ||||||| ||||||||    
T  32624191 taccataaaatttgcc 32624176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 382
Target Start/End: Complemental strand, 11758681 - 11758612
Alignment:
Q  313 atttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  11758681 atttattattaattttacgacttggtgtactgatacacccaaatttattgggtgtaccatagaatttgcc 11758612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 4094773 - 4094657
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||| |||||||||||||||||||| |||||||       ||||| |||||||||||||||||||| ||| |||||||| | | ||||||| ||||||||    
T  4094773 gttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgatttgatgtaccgacatatccaaatttattggatg 4094674  T
Q  367 taccatagaatttgcct 383  Q
    ||| |||||||||||||    
T  4094673 tacgatagaatttgcct 4094657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 267 - 379
Target Start/End: Original strand, 8068611 - 8068722
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||| |||||||||||||||||||        |||| ||| ||||||||||||| ||||||||||| ||||||||||||||| ||||| ||    
T  8068611 gttgtcaatgataaaaaataattatttttcttcaaaaaat-aactcattcattattaattttatgacttggtgtaacgatacacccaaatttattgggtg 8068709  T
Q  367 taccatagaattt 379  Q
    |||||||||||||    
T  8068710 taccatagaattt 8068722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 3881946 - 3881831
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||||| || |||||||||| ||||||| ||||| |||| ||     
T  3881946 gttgtcaatgatagaaaataattatttttcttcaaaaaat-aacttatttattattaattttatgatttggtgtaccaatacacctaaatttattgaata 3881848  T
Q  367 taccatagaatttgcct 383  Q
    ||||||| |||||||||    
T  3881847 taccatataatttgcct 3881831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 37963276 - 37963391
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||| ||||||||||        |||| ||||||||||||||| |  | |||||||||||||||| ||||||| |||||| |    
T  37963276 gttgtcaatgatagaaaataataatttttcttcaaaaaaataactaatttattattaatttaataaattggtgtaccgatacatccaaatttattggacg 37963375  T
Q  367 taccatagaatttgcc 382  Q
    ||| ||||||||||||    
T  37963376 tactatagaatttgcc 37963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 40801110 - 40801176
Alignment:
Q  383 ttaatataaaaggtggttacatatatcagtaattgggaaatgtataagaatatttacttagataatatt 451  Q
    |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  40801110 ttaacataaaaggtggttacgtat--cagtaattgggaaatgtataagaatatttacttagataatatt 40801176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 307 - 368
Target Start/End: Original strand, 32063858 - 32063919
Alignment:
Q  307 caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgta 368  Q
    ||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||    
T  32063858 caactcatttattattaattttacgatttggtgtaccgatacatccaaatttattggatgta 32063919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 9530770 - 9530719
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  9530770 agggaacttctatggtacacccacaattttgagtgtaccggtactcttgttg 9530719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 43411808 - 43411884
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtacc 343  Q
    |||||||||||||||||||||||||||||||||        |||| |||||||||||||||||||| ||||||||||    
T  43411808 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgatttggtgtacc 43411884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 13588862 - 13588914
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  13588862 aagggaacttctatggtacacccacaattttgagtgtaccggtacttttgttg 13588914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 384
Target Start/End: Original strand, 34859733 - 34859841
Alignment:
Q  273 aatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccat 372  Q
    |||||||||||||||||||||||||||       ||| | |||||||| |||||||||||||||| ||||    ||||||||||| | ||| ||||||||    
T  34859733 aatgatagaaaataattatttttcttcaaaaaaacaattcatttattactaattttacgacttggcgtac---gacacccaaatttaatgggtgtaccat 34859829  T
Q  373 agaatttgcctt 384  Q
    ||||||| ||||    
T  34859830 agaatttacctt 34859841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 42534392 - 42534442
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  42534392 agggaacttctatggtacactcacaattttgagtgtaccgatacttttgtt 42534442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 16730128 - 16730081
Alignment:
Q  222 gaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  16730128 gaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 16730081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 22279216 - 22279267
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||||  | ||||||||||||||||||||||||||| |||||||||||    
T  22279216 agggaacttcaacggtacacccacaattttgagtgtaccggtactcttgttg 22279267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 25684472 - 25684421
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| || |||||||||||||||| ||||||||||    
T  25684472 aagggaacttctatggtacactcataattttgagtgtaccggtactcttgtt 25684421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 40340837 - 40340786
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| ||||||||||||||| ||| ||||||||||    
T  40340837 aagggaacttttatggtacactcacaattttgagtgtcccggtactcttgtt 40340786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 8068323 - 8068368
Alignment:
Q  224 acttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||    
T  8068323 acttctatggtacactcacaattttgagtgtaccggtactcttgtt 8068368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 31236588 - 31236637
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||| || |||||||||| ||||||||||||||||||| ||||||||||    
T  31236588 gggaatttctatggtacactcacaattttgagtgtaccggtactcttgtt 31236637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 32063529 - 32063574
Alignment:
Q  224 acttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||    
T  32063529 acttctatggtacactcacaattttgagtgtaccggtactcttgtt 32063574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 39540719 - 39540768
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| || |||||||    
T  39540719 gggaacttctatggtacactcacaattttgagtgtaccgttattcttgtt 39540768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 43411517 - 43411566
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| ||||||||||  |||||||||||||||||| ||||||||||    
T  43411517 gggaacttctatggtacactaacaattttgagtgtaccggtactcttgtt 43411566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 4095064 - 4095016
Alignment:
Q  221 ggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| |||||||||| ||||||||||||||||||  ||||||||||    
T  4095064 ggaacttctatggtacactcacaattttgagtgtaccagtactcttgtt 4095016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 22798076 - 22798116
Alignment:
Q  229 tatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  22798076 tatggtacactcacaattttgagtgtaccggtactcttgtt 22798116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 28769947 - 28769995
Alignment:
Q  221 ggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| |||||||||| ||||||||||||| ||||| ||||||||||    
T  28769947 ggaacttctatggtacactcacaattttgagtataccggtactcttgtt 28769995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 15726334 - 15726283
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||  |||| |||||||||||||| ||||||||||    
T  15726334 aagggaacttttatggtacattcacatttttgagtgtaccggtactcttgtt 15726283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 27353461 - 27353418
Alignment:
Q  342 ccgatacacccaaattcattggatgtaccatagaatttgcctta 385  Q
    |||||||||||||||| ||||| | |||||||||||||||||||    
T  27353461 ccgatacacccaaatttattgggtataccatagaatttgcctta 27353418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 385
Target Start/End: Complemental strand, 6560888 - 6560823
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcctta 385  Q
    ||||||||| | || |||||||||| |||||| |||||| ||||| |||||||||||||||| ||||    
T  6560888 tattaatttaaggatttggtgtaccaatacactcaaatt-attgggtgtaccatagaatttgtctta 6560823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 10453688 - 10453638
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| |||||||||||||||| || |||| |||||    
T  10453688 agggaacttctatggtacactcacaattttgagtgtatcggtacttttgtt 10453638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 23189066 - 23189104
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtacc 257  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  23189066 agggaacttctatggtacactcacaattttgagtgtacc 23189104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 6114118 - 6114182
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcctt 384  Q
    ||||||||| | || |||||| ||| |||||| ||||||  |||||||||||||||||||||||||    
T  6114118 tattaatttaaggatttggtggaccaatacactcaaattg-ttggatgtaccatagaatttgcctt 6114182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 32993688 - 32993737
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaa 386  Q
    |||||||| ||||| |||||  ||||| ||||||||||||||||||||||    
T  32993688 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgccttaa 32993737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 34302708 - 34302644
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcctt 384  Q
    ||||||||| | || ||| |||||| |||||| |||||| ||||| ||||||||||||||||||||    
T  34302708 tattaatttaaggatttgatgtaccaatacactcaaatt-attgggtgtaccatagaatttgcctt 34302644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 6335505 - 6335477
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  6335505 gttgtcaatgatagaaaataattattttt 6335477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Original strand, 10118537 - 10118565
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttc 296  Q
    |||||||||||||||||||||||||||||    
T  10118537 ttgtcaatgatagaaaataattatttttc 10118565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 12336328 - 12336300
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  12336328 gttgtcaatgatagaaaataattattttt 12336300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 13593573 - 13593601
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  13593573 gttgtcaatgatagaaaataattattttt 13593601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 27979058 - 27979014
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgc 381  Q
    |||||||||||||| |||||  |||||||||| ||||||||||||    
T  27979058 gtgtaccgatacactcaaatatattggatgtatcatagaatttgc 27979014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 32063817 - 32063845
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  32063817 gttgtcaatgatagaaaataattattttt 32063845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 43237712 - 43237759
Alignment:
Q  334 ttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||| |||||| |||||| ||||| ||||||||||||||||||    
T  43237712 ttggtgtaccaatacactcaaatt-attgggtgtaccatagaatttgcc 43237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 4e-45; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 54009020 - 54008903
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  54009020 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgggtg 54008921  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||||||||||||||    
T  54008920 taccatagaatttgcctt 54008903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 267 - 386
Target Start/End: Original strand, 52782451 - 52782570
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52782451 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatg 52782550  T
Q  367 taccatagaatttgccttaa 386  Q
    ||||||||||||||||||||    
T  52782551 taccatagaatttgccttaa 52782570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 44962717 - 44962594
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  44962717 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccaatacacccaaatttattggatg 44962618  T
Q  367 taccatagaatttgccttaatata 390  Q
    ||||||||||||||||| ||||||    
T  44962617 taccatagaatttgcctaaatata 44962594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 267 - 386
Target Start/End: Complemental strand, 1326716 - 1326597
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| | |||||||||||||||| ||||||||||||| ||    
T  1326716 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacaatttggtgtaccgatacatccaaattcattgggtg 1326617  T
Q  367 taccatagaatttgccttaa 386  Q
    ||||||||||||||||||||    
T  1326616 taccatagaatttgccttaa 1326597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 32720099 - 32719985
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgt 367  Q
    |||| |||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  32720099 ttgttaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgt 32720000  T
Q  368 accatagaatttgcc 382  Q
    |||||||||||||||    
T  32719999 accatagaatttgcc 32719985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 55365666 - 55365783
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnnc-aactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||         |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55365666 gttgtcaatgatagaaaataattatttttcttcaaaaaaaataactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggat 55365765  T
Q  366 gtaccatagaatttgcct 383  Q
    ||||||||||||||||||    
T  55365766 gtaccatagaatttgcct 55365783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 267 - 387
Target Start/End: Complemental strand, 2667599 - 2667479
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||| ||||||||||       ||||| ||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||    
T  2667599 gttgtcaatgatagaaaataataatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccgatacaccctaatttattgggtg 2667500  T
Q  367 taccatagaatttgccttaat 387  Q
    |||||||||||||||||||||    
T  2667499 taccatagaatttgccttaat 2667479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 33830645 - 33830529
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||| |||       ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||    
T  33830645 gttgtcaatgatagaaaataattattttttttcaaaaaaacaactcatttattattaattttatgacttggtgtaccgatacacccaaatttattgggtg 33830546  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  33830545 taccatagaatttgcct 33830529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 48925703 - 48925819
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||  |||||| ||||| ||    
T  48925703 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacattcaaatttattgggtg 48925802  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  48925803 taccatagaatttgcct 48925819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 7157330 - 7157445
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| | | || |||||||||||||||| ||    
T  7157330 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgcatcaatgcacccaaattcattgggtg 7157429  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  7157430 taccatagaatttgcc 7157445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 37567333 - 37567218
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  37567333 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatccaaatttattgggtg 37567234  T
Q  367 taccatagaatttgcc 382  Q
    |||| |||||||||||    
T  37567233 taccgtagaatttgcc 37567218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 45927335 - 45927220
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||    
T  45927335 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgatacacccaaatttattgggtg 45927236  T
Q  367 taccatagaatttgcc 382  Q
    ||||||| ||||||||    
T  45927235 taccataaaatttgcc 45927220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 267 - 389
Target Start/End: Original strand, 9322725 - 9322847
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||| |||||||||||||||||||       ||||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||| ||    
T  9322725 gttgtcaatgatataaaataattatttttcttcaaaaaaacaactcatttattatttattttacgacttggtgtaccgatacaccaaaatttattgggtg 9322824  T
Q  367 taccatagaatttgccttaatat 389  Q
    ||||||||||||||||| |||||    
T  9322825 taccatagaatttgcctaaatat 9322847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 44500407 - 44500524
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||| |||||||||||||||||||| |||||||       ||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||| ||    
T  44500407 gttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatgcacccaaatttattgggtg 44500506  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||||||||||||||    
T  44500507 taccatagaatttgcctt 44500524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 307 - 386
Target Start/End: Original strand, 52788755 - 52788834
Alignment:
Q  307 caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaa 386  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52788755 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgccttaa 52788834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 271 - 384
Target Start/End: Original strand, 26409915 - 26410028
Alignment:
Q  271 tcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtacc 370  Q
    |||||||||||||||||||||||||||||       ||||| ||||||||||||||| | || |||||||||||||||||||||||| ||||||||||||    
T  26409915 tcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaatgaattggtgtaccgatacacccaaatttattggatgtacc 26410014  T
Q  371 atagaatttgcctt 384  Q
    ||| ||||||||||    
T  26410015 ataaaatttgcctt 26410028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 53186119 - 53186002
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||| |||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| | ||    
T  53186119 gttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgatacacccaaatttatttggtg 53186020  T
Q  367 taccatagaatttgcctt 384  Q
    |||| |||||||||||||    
T  53186019 taccgtagaatttgcctt 53186002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 346805 - 346689
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||| ||||||||||||||||||||||||||       ||||| |||||||||||||||||| |||| ||||||||||||| ||||||| ||||| ||    
T  346805 gttgtcgatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttaccacttagtgtaccgatacatccaaatttattgggtg 346706  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  346705 taccatagaatttgcct 346689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 48389050 - 48389166
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||| |    
T  48389050 gttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggtgtatcgatacatccaaatttattgggt 48389149  T
Q  366 gtaccatagaatttgcc 382  Q
    |||||||||||||||||    
T  48389150 gtaccatagaatttgcc 48389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 49951217 - 49951332
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||| ||| |||||||| ||||||| ||| | ||    
T  49951217 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtgccgatacatccaaatttattaggtg 49951316  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  49951317 taccatagaatttgcc 49951332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 50560653 - 50560768
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| | ||||| ||||| |     
T  50560653 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatctaaatttattgggtt 50560752  T
Q  367 taccatagaatttgcc 382  Q
    |||||||||| |||||    
T  50560753 taccatagaacttgcc 50560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 369
Target Start/End: Complemental strand, 53376706 - 53376604
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| ||||||||| |||||| ||||||| ||||||||    
T  53376706 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgaattggtgtactgatacatccaaatttattggatg 53376607  T
Q  367 tac 369  Q
    |||    
T  53376606 tac 53376604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 307 - 383
Target Start/End: Complemental strand, 54011217 - 54011141
Alignment:
Q  307 caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  54011217 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtactatagaatttgcct 54011141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 50465580 - 50465473
Alignment:
Q  273 aatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccat 372  Q
    |||||| ||||||||||||||||| ||       ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  50465580 aatgatggaaaataattatttttcctcaaaaaaacaactcatttattattaattttacaacttggtgtaccgatacacccaaatttattgaatgtaccat 50465481  T
Q  373 agaatttg 380  Q
    | ||||||    
T  50465480 aaaatttg 50465473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 267 - 353
Target Start/End: Complemental strand, 14460296 - 14460210
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacaccca 353  Q
    |||||||||||||||||||||||||||||||||       |||||  ||||||||||||||||||||||||||||||||||||||||    
T  14460296 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcttttattattaattttacgacttggtgtaccgatacaccca 14460210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 35320700 - 35320770
Alignment:
Q  313 atttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  35320700 atttattactaatattacgacttggtgtaccgatacacccaaatttagtgggtgtaccatagaatttgcct 35320770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 36019708 - 36019784
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtacc 343  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| ||||||||||    
T  36019708 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtacc 36019784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 48990427 - 48990351
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtacc 343  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||| ||||||||||||    
T  48990427 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtacc 48990351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 36019413 - 36019465
Alignment:
Q  217 taagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  36019413 taagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 36019465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 52782156 - 52782208
Alignment:
Q  217 taagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  52782156 taagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 52782208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 51235636 - 51235558
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttc--nnnnnnncaactgatttattattaattttacgacttggtgtacc 343  Q
    |||||||||||||||||||||||||||||||||          |||| |||||||||||||||||||||||||||||||    
T  51235636 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaaactcatttattattaattttacgacttggtgtacc 51235558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 35320360 - 35320409
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  35320360 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 35320409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 383
Target Start/End: Complemental strand, 42622725 - 42622608
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgattta--ttattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    ||||||||| ||||||||||||| ||||||||       ||||| |||||  |||||||||| |||| ||||||||| | ||||| ||| ||  |||| |    
T  42622725 ttgtcaatgctagaaaataattaattttcttcagaaaaacaactcatttaatttattaatttaacgatttggtgtactggtacactcaatttttttgggt 42622626  T
Q  366 gtaccatagaatttgcct 383  Q
    ||||||||||||||||||    
T  42622625 gtaccatagaatttgcct 42622608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 51235928 - 51235879
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  51235928 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 51235879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 35352191 - 35352239
Alignment:
Q  221 ggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  35352191 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 35352239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 32720395 - 32720344
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| |||||||||||||||| || ||||||||||    
T  32720395 aagggaacttctatggtacactcacaattttgagtgtatcggtactcttgtt 32720344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 53377007 - 53376948
Alignment:
Q  210 attaacataagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||| ||| |||||||| |||||||||| ||||||||||| ||||||| ||||||||||    
T  53377007 attaaaatatgggaacttctatggtacactcacaattttgaatgtaccggtactcttgtt 53376948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 14460592 - 14460542
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| || |||||||||||||||| ||||||||||    
T  14460592 agggaacttctatggtacactcataattttgagtgtaccggtactcttgtt 14460542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 386
Target Start/End: Original strand, 23043644 - 23043762
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||   |       ||||| ||||||||||||| | || ||||| |||||| ||||| | ||||| |||| | |    
T  23043644 gttgtcaatgatagaaaataattatttttga-caaaaaaacaactcatttattattaatgtaacaacttgatgtaccaatacatcaaaatttattgaaag 23043742  T
Q  367 taccatagaatttgccttaa 386  Q
    ||||||| ||||||||||||    
T  23043743 taccatataatttgccttaa 23043762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 49950924 - 49950970
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactctt 266  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  49950924 gggaacttctatggtacactcacaattttgagtgtaccggtactctt 49950970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 50465880 - 50465830
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| ||||||||||||||||||| || |||||||    
T  50465880 agggaacttctatggtacactcacaattttgagtgtaccggtattcttgtt 50465830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 7352529 - 7352578
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaa 386  Q
    |||||||||||||| |||||  | ||||||||||||||||||||||||||    
T  7352529 gtgtaccgatacactcaaatatagtggatgtaccatagaatttgccttaa 7352578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 33830937 - 33830888
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||| | ||||||||||    
T  33830937 gggaacttctatggtacactcacaattttgagtgtactggtactcttgtt 33830888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 7157036 - 7157088
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||||| |||||| || ||| |||||||||||||||| |||||||||||    
T  7157036 aagggaacttctatggtgcatccataattttgagtgtaccggtactcttgttg 7157088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 11140309 - 11140246
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || |||||||||| |||||| |||||| ||||| |||||||||||||||||||    
T  11140309 tattaatttaaggatttggtgtaccaatacactcaaatt-attgggtgtaccatagaatttgcct 11140246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 382
Target Start/End: Original strand, 16136985 - 16137029
Alignment:
Q  338 tgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||    
T  16136985 tgtaccgatacactcaaatatattggatgtaccatagaatttgcc 16137029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 26885315 - 26885379
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || ||||||||||||||||| |||||  ||||| ||||||||| |||||||||    
T  26885315 tattaatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcct 26885379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 43715107 - 43715154
Alignment:
Q  334 ttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||    
T  43715107 ttggtgtaccaatacacccaaattt-ttggatgtaccatagaatttgcc 43715154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 54009315 - 54009263
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    ||||||| || ||||||||| ||| |||||||||||||||| |||||||||||    
T  54009315 aagggaatttctatggtacatccataattttgagtgtaccggtactcttgttg 54009263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 298
Target Start/End: Complemental strand, 881839 - 881808
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttctt 298  Q
    ||||||||||||||||||||||||||||||||    
T  881839 gttgtcaatgatagaaaataattatttttctt 881808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 29491726 - 29491659
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaa 386  Q
    ||||||||| | || | ||||||||| ||||| |||||  ||||| ||||||||||||||||||||||    
T  29491726 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgccttaa 29491659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 42364271 - 42364333
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||| | || |||||||||| |||||| |||||| ||||| ||||||||||||||||||    
T  42364271 tattaatttaaggatttggtgtaccaatacactcaaatt-attgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 382
Target Start/End: Complemental strand, 19547534 - 19547489
Alignment:
Q  336 ggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  19547534 ggtgtaccgatacactcaaattt-ttggatgtaccatagaatttgcc 19547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 35749272 - 35749330
Alignment:
Q  334 ttggtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaatataaa 392  Q
    ||||||||||||||||| |||||   ||||||||||| |||||||| |||||| |||||    
T  35749272 ttggtgtaccgatacactcaaatatgttggatgtaccgtagaatttaccttaaaataaa 35749330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 44500134 - 44500184
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||| || |||||||||| ||||||||||||||||||  ||||||||||    
T  44500134 agggaaattctatggtacactcacaattttgagtgtaccagtactcttgtt 44500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 45927628 - 45927578
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| || ||||||||||||| || ||||||||||    
T  45927628 agggaacttctatggtacactcataattttgagtgtatcggtactcttgtt 45927578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 48388762 - 48388808
Alignment:
Q  223 aacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||| |||||||||| ||||||||||||||||| | ||||||||||    
T  48388762 aacttctatggtacactcacaattttgagtgtactggtactcttgtt 48388808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 37567625 - 37567576
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| || ||||||||||||| || ||||||||||    
T  37567625 gggaacttctatggtacactcataattttgagtgtatcggtactcttgtt 37567576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 48925411 - 48925460
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||| || |||||||||| ||||||||||||||||| | ||||||||||    
T  48925411 gggaatttctatggtacactcacaattttgagtgtactggtactcttgtt 48925460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 7347205 - 7347173
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttc 299  Q
    ||||||||||||||||| |||||||||||||||    
T  7347205 gttgtcaatgatagaaagtaattatttttcttc 7347173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 9506966 - 9506902
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || ||||||||||||| ||| |||||  ||||| |||| ||||||||||||||    
T  9506966 tattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcct 9506902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 9514941 - 9514877
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || ||||||||||||| ||| |||||  ||||| |||| ||||||||||||||    
T  9514941 tattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcct 9514877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 40477820 - 40477752
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaat 387  Q
    ||||||||| | || | ||||||||| ||||| |||||  ||||| |||||||||||||||| ||||||    
T  40477820 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgtcttaat 40477752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 42067641 - 42067578
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || |||||||||| |||||| ||||||  |||| |||||||||||||||||||    
T  42067641 tattaatttaaggatttggtgtaccaatacactcaaattg-ttgggtgtaccatagaatttgcct 42067578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 48990692 - 48990652
Alignment:
Q  229 tatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||||||| |||| ||||||||||    
T  48990692 tatggtacactcacaattttgagtgcaccggtactcttgtt 48990652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 4e-45; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 1860042 - 1859925
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1860042 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgggtg 1859943  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||||||||||||||    
T  1859942 taccatagaatttgcctt 1859925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 6657558 - 6657442
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  6657558 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgagtg 6657459  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  6657458 taccatagaatttgcct 6657442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 7504315 - 7504433
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7504315 gttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgggt 7504414  T
Q  366 gtaccatagaatttgcctt 384  Q
    |||||||||||||||||||    
T  7504415 gtaccatagaatttgcctt 7504433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 41839768 - 41839654
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgt 367  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41839768 ttgtcaatgatagaaaataattatttttcttcaagaaaacaactgatttattattaattttacgacttggtgtaccgatacacccaaatttattggatgt 41839669  T
Q  368 accatagaatttgcc 382  Q
    |||||| ||||||||    
T  41839668 accataaaatttgcc 41839654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 267 - 388
Target Start/End: Complemental strand, 26738147 - 26738026
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |     
T  26738147 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgatacatccaaattcattgggta 26738048  T
Q  367 taccatagaatttgccttaata 388  Q
    ||||||||||||||||||||||    
T  26738047 taccatagaatttgccttaata 26738026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 37725666 - 37725550
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  37725666 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtg 37725567  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  37725566 taccatagaatttgcct 37725550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 39879211 - 39879328
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  39879211 gttgtcaatgatagaaaataattatttttctttaaaaaaacaactaatttattattaattttatgacttggtgtaccgatacacccaaattcattagatg 39879310  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||||||||||||||    
T  39879311 taccatagaatttgcctt 39879328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 40533366 - 40533241
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||    
T  40533366 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgatacacccaaatttattgggtg 40533267  T
Q  367 taccatagaatttgccttaatataaa 392  Q
    ||||||||||||||||| | ||||||    
T  40533266 taccatagaatttgcctaattataaa 40533241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 36947774 - 36947889
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||    
T  36947774 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacagatacacccaaatttattgggtg 36947873  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  36947874 taccatagaatttgcc 36947889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 490026 - 490140
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  490026 gttgtcaatgatagaaaataattatttttcttcaaaaaa-caactaatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtg 490124  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  490125 taccatagaatttgcc 490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 45555497 - 45555379
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  45555497 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgacttggtgtaccgatacatccaaatttattgggtg 45555398  T
Q  367 taccatagaatttgcctta 385  Q
    |||||||||||||||||||    
T  45555397 taccatagaatttgcctta 45555379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 21425327 - 21425202
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||    
T  21425327 gttgtcaatgatagaaaataattatttttcttataaaaaacaactaatttattattaatttaacgaattggtgtaccgatacacccaaatttattgggtg 21425228  T
Q  367 taccatagaatttgccttaatataaa 392  Q
    |||||||||||||||||||| |||||    
T  21425227 taccatagaatttgccttaaaataaa 21425202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 2317130 - 2317246
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  2317130 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccgatacacccaaatttattggatg 2317229  T
Q  367 taccatagaatttgcct 383  Q
    ||||||| ||| |||||    
T  2317230 taccataaaatatgcct 2317246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 273 - 392
Target Start/End: Original strand, 13568510 - 13568629
Alignment:
Q  273 aatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccat 372  Q
    |||||||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  13568510 aatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgatacatccaaatttattggatgtaccat 13568609  T
Q  373 agaatttgccttaatataaa 392  Q
    | |||||||||||| |||||    
T  13568610 aaaatttgccttaaaataaa 13568629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 267 - 388
Target Start/End: Original strand, 18009246 - 18009367
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  18009246 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgatacacctaaatttattggatg 18009345  T
Q  367 taccatagaatttgccttaata 388  Q
    || ||||||| |||||| ||||    
T  18009346 tatcatagaacttgcctaaata 18009367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 267 - 379
Target Start/End: Original strand, 33424024 - 33424137
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  33424024 gttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggcgtaccgatacacccaaatttattggat 33424123  T
Q  366 gtaccatagaattt 379  Q
    ||||||||||||||    
T  33424124 gtaccatagaattt 33424137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 3724233 - 3724348
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||| | ||    
T  3724233 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtataccgatacacccaaatttattaggtg 3724332  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  3724333 taccatagaatttgcc 3724348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 10711392 - 10711277
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||| |||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| | ||    
T  10711392 gttgtcaatgataaaaaataattatttttcttcaaaacaacaactcatttattattaattttacgacttggtgtaccgatagacccaaatttattaggtg 10711293  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  10711292 taccatagaatttgcc 10711277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 35292624 - 35292510
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||| |||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  35292624 gttgtcaatgatagaaa-taattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatccaaatttattgggtg 35292526  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  35292525 taccatagaatttgcc 35292510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 33716586 - 33716704
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||| ||| || | |||||||||||||||||||||||| ||||||||    
T  33716586 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattagtttaacaaattggtgtaccgatacacccaaatttattggatg 33716685  T
Q  367 taccatagaatttgcctta 385  Q
    |||| ||||||||||||||    
T  33716686 taccgtagaatttgcctta 33716704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 21836454 - 21836336
Alignment:
Q  267 gttgtcaatgatagaaaata---attatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgg 363  Q
    ||||||||||||||||||||   |||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  21836454 gttgtcaatgatagaaaatagtaattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccgaatttattgg 21836355  T
Q  364 atgtaccatagaatttgcc 382  Q
     ||||||||||||||||||    
T  21836354 gtgtaccatagaatttgcc 21836336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 362
Target Start/End: Original strand, 36192262 - 36192357
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattg 362  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36192262 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattg 36192357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 267 - 380
Target Start/End: Original strand, 5085131 - 5085243
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| |||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||    
T  5085131 gttgtcaatgatagaaaataattatttttcttcagaaaat-aactcatttattattaattttacgacttggtgtactgatacacctaaatttattgggtg 5085229  T
Q  367 taccatagaatttg 380  Q
    ||| ||||||||||    
T  5085230 tactatagaatttg 5085243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 307 - 383
Target Start/End: Original strand, 18576643 - 18576719
Alignment:
Q  307 caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  18576643 caactcatttattattaattttacgacttggtgtaccaatacacccaaatttattggatgtaccataaaatttgcct 18576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 16815142 - 16815256
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| | |    
T  16815142 gttgtcaatgatagaaaataattatttttcttcaaaaaaaacaact-atttattattaattttacgatttggtgtaccgatacacccaaatttattaggt 16815240  T
Q  366 gtaccatagaatttgc 381  Q
    |||||||| |||||||    
T  16815241 gtaccataaaatttgc 16815256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 14820031 - 14819916
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||| |||||||||||||||||||       ||||| ||||||||||||||| ||||| |||| ||| |||||||||||||| ||  | ||    
T  14820031 gttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaatttaacgacatggtatactgatacacccaaatttatcaggtg 14819932  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  14819931 taccatagaatttgcc 14819916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 363
Target Start/End: Complemental strand, 28394185 - 28394087
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaa--ctgatttattattaattttacgacttggtgtaccgatacacccaaattcattgg 363  Q
    |||||||||||||||||||||||||||||||||        ||  || ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28394185 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgg 28394087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 16854339 - 16854413
Alignment:
Q  307 caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgc 381  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||| |||||||    
T  16854339 caactcatttattattaattttacgatttggtgtaccgatacacccaaatttattaggtgtaccataaaatttgc 16854413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 267 - 379
Target Start/End: Complemental strand, 44068163 - 44068052
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||| ||||||||||       ||||| ||||||||||||||| | || ||||| |||||||||||||||||| |||||||     
T  44068163 gttgtcaatgatagaaaataataatttttcttcaaaaaa-caactaatttattattaatttaatgaattggtataccgatacacccaaatttattggata 44068065  T
Q  367 taccatagaattt 379  Q
    ||||||| |||||    
T  44068064 taccataaaattt 44068052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 7504021 - 7504072
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  7504021 agggaacttctatggtacacccacaattttgagtgtaccggtactcttgttg 7504072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 382
Target Start/End: Original strand, 36049804 - 36049873
Alignment:
Q  313 atttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||| | ||||| || |||||||||||||    
T  36049804 atttattactaatattacgacttggtgtaccgatacacctaaatttagtggatatatcatagaatttgcc 36049873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 40533662 - 40533609
Alignment:
Q  216 ataagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  40533662 ataagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 40533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 6657854 - 6657802
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  6657854 aagggaacttctatggtacacccataattttgagtgtaccggtactcttgttg 6657802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 37725961 - 37725909
Alignment:
Q  217 taagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  37725961 taagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 37725909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 13568203 - 13568261
Alignment:
Q  211 ttaacataagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||| |||| |||||    
T  13568203 ttaaaataagggaacttctatggtacactcacaattttgagtgtaccggtactgttgtt 13568261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 41840064 - 41840010
Alignment:
Q  217 taagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttgt 271  Q
    ||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||    
T  41840064 taagggaacttctatggtacatccataattttgagtgtaccggtactcttgttgt 41840010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 2316838 - 2316887
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  2316838 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 2316887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 3723941 - 3723990
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  3723941 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 3723990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 18576300 - 18576349
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  18576300 gggaacttttatggtacactcacaattttgagtgtaccggtactcttgtt 18576349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 19636042 - 19635993
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  19636042 gggaacttctatggtacactcacaattttgagtgtaccgatacttttgtt 19635993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 19834635 - 19834586
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  19834635 gggaacttctatggtacactcacaattttgagtgtaccgatacttttgtt 19834586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 28394474 - 28394426
Alignment:
Q  221 ggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  28394474 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 28394426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 11227689 - 11227627
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||| | || |||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  11227689 tattaatttaaggatttggtgtaccaatacactcaaatt-attggatgtaccatagaatttgcc 11227627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 16814849 - 16814900
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||| ||||| ||||||||||||||||||| ||||||||||    
T  16814849 aagggaacttctatgatacactcacaattttgagtgtaccggtactcttgtt 16814900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 16854129 - 16854180
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||| ||||| ||||||||||||||||||| ||||||||||    
T  16854129 aagggaacttctatgatacactcacaattttgagtgtaccggtactcttgtt 16854180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 1860334 - 1860288
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactctt 266  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||    
T  1860334 gggaacttctatgatacacccacaattttgagtgtaccggtactctt 1860288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 18008951 - 18009004
Alignment:
Q  216 ataagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||| ||||||| ||||||||||  |||||||||||||||||| ||||||||||    
T  18008951 ataaaggaacttctatggtacacttacaattttgagtgtaccggtactcttgtt 18009004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 36049464 - 36049513
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||  ||||||||||||||||||| ||||||||||    
T  36049464 gggaacttctatggtacattcacaattttgagtgtaccggtactcttgtt 36049513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 36947482 - 36947531
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||| || |||||||||| ||||||||||||||||||| ||||||||||    
T  36947482 gggaatttctatggtacactcacaattttgagtgtaccggtactcttgtt 36947531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 39878918 - 39878970
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttgt 271  Q
    ||||||||| |||||||||  ||||||||||||||||||| |||| |||||||    
T  39878918 agggaacttctatggtacattcacaattttgagtgtaccggtacttttgttgt 39878970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 21836690 - 21836643
Alignment:
Q  222 gaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||| |||||||||| ||||||||||||||||||| | ||||||||    
T  21836690 gaacttctatggtacactcacaattttgagtgtaccggtgctcttgtt 21836643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 5084838 - 5084888
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| ||| |||||| || |||||||||||||||| ||||||||||    
T  5084838 agggaacttctatcgtacactcataattttgagtgtaccggtactcttgtt 5084888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 382
Target Start/End: Complemental strand, 6945386 - 6945340
Alignment:
Q  336 ggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||| ||||| |||||  ||||||||||||||||||||||||    
T  6945386 ggtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 6945340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 10711684 - 10711634
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| ||| |||||| ||||||||||| ||||||| ||||||||||    
T  10711684 agggaacttctattgtacactcacaattttgaatgtaccggtactcttgtt 10711634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 26738439 - 26738389
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||| ||||||||| ||| |||||| ||||||||| |||||||||||    
T  26738439 gggaacttttatggtacatccataattttaagtgtaccggtactcttgttg 26738389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 4673961 - 4674009
Alignment:
Q  334 ttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    |||||||||| |||||| ||||||  ||||||||||||||||||||||||    
T  4673961 ttggtgtaccaatacactcaaattg-ttggatgtaccatagaatttgcct 4674009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 379
Target Start/End: Complemental strand, 5615442 - 5615378
Alignment:
Q  314 tttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaattt 379  Q
    ||||||| |||||| |||| ||| ||||||| ||||| ||||||  ||||||||||||||||||||    
T  5615442 tttattaataatttaacgatttgatgtaccggtacactcaaattt-ttggatgtaccatagaattt 5615378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 382
Target Start/End: Original strand, 15206079 - 15206143
Alignment:
Q  318 ttattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||| |||| ||||||||||  ||||| ||||||  || |||||| |||||||||||||    
T  15206079 ttattaatttaacgatttggtgtaccagtacactcaaattttttagatgtatcatagaatttgcc 15206143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 42849671 - 42849735
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || | |||||| || ||||| |||||  |||||||||||||||||||||||||    
T  42849671 tattaatttaaagagtgggtgtatcggtacactcaaatatattggatgtaccatagaatttgcct 42849735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Complemental strand, 43359217 - 43359189
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttc 296  Q
    |||||||||||||||||||||||||||||    
T  43359217 ttgtcaatgatagaaaataattatttttc 43359189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 13718 - 13602
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13718 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgggtg 13619  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  13618 taccatagaatttgcct 13602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 14013 - 13960
Alignment:
Q  217 taagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    ||||||||||| ||||||||||||| |||||||||||||||| |||| ||||||    
T  14013 taagggaacttctatggtacacccataattttgagtgtaccggtacttttgttg 13960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 2038387 - 2038503
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2038387 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 2038486  T
Q  367 taccatagaatttgcct 383  Q
    ||||||| |||||||||    
T  2038487 taccataaaatttgcct 2038503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 1282296 - 1282180
Alignment:
Q  271 tcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtacc 370  Q
    |||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  1282296 tcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgtaccgatacacccaaatttattgggtgtacc 1282197  T
Q  371 atagaatttgccttaat 387  Q
    |||||||||||||||||    
T  1282196 atagaatttgccttaat 1282180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 18922691 - 18922575
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  18922691 gttgtcaatgatagaaaataattatttttcttcaataaaacaactaatttattattaattttacgacttggtgtaccgatacacccaaatttattgaatg 18922592  T
Q  367 taccatagaatttgcct 383  Q
    ||| |||||||||||||    
T  18922591 tactatagaatttgcct 18922575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 24505238 - 24505123
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||    
T  24505238 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccgatacacccaaatttattgggtg 24505139  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  24505138 taccatagaatttgcc 24505123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 267 - 386
Target Start/End: Complemental strand, 42039417 - 42039298
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  42039417 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtatcgatacacccaaatttattggatg 42039318  T
Q  367 taccatagaatttgccttaa 386  Q
    |||| |||||||||||||||    
T  42039317 taccgtagaatttgccttaa 42039298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 15090783 - 15090667
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| || ||||||||||||||||| |||||||||||||||||||||||| ||||| ||    
T  15090783 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatgtattattaattttacgatttggtgtaccgatacacccaaatttattgggtg 15090684  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  15090683 taccatagaatttgcct 15090667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 45197096 - 45197212
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||| ||||||||||||| ||||||| ||||| ||    
T  45197096 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgtaccgatacatccaaatttattgggtg 45197195  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  45197196 taccatagaatttgcct 45197212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 25867020 - 25866905
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||| |||||||||||||||||||       ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||    
T  25867020 gttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtactgatacacccaaatttattgggtg 25866921  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  25866920 taccatagaatttgcc 25866905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 32186717 - 32186832
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  32186717 gttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatccaaatttattgggtg 32186816  T
Q  367 taccatagaatttgcc 382  Q
    ||| ||||||||||||    
T  32186817 tacaatagaatttgcc 32186832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 41715433 - 41715548
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  41715433 gttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatccaaatttattgggtg 41715532  T
Q  367 taccatagaatttgcc 382  Q
    ||| ||||||||||||    
T  41715533 tacaatagaatttgcc 41715548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 386
Target Start/End: Original strand, 42902678 - 42902797
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||    
T  42902678 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaacttatttattattaattttacgacttggtgtaccaatacacccaaatttattaggtg 42902777  T
Q  367 taccatagaatttgccttaa 386  Q
    ||||||||||||||||||||    
T  42902778 taccatagaatttgccttaa 42902797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 7574406 - 7574523
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||| |||  |||||||||||||||| ||||||| ||||||||    
T  7574406 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaacggattggtgtaccgatacatccaaatttattggatg 7574505  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||||||||||||||    
T  7574506 taccatagaatttgcctt 7574523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 40947265 - 40947381
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| || ||||| | ||||||||||||| ||||||||    
T  40947265 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgaattagtgtaacaatacacccaaatttattggatg 40947364  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  40947365 taccatagaatttgcct 40947381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 3062017 - 3061902
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||| |||        |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  3062017 gttgtcaatgatagaaaataattattttttttcaaaaaaataactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtg 3061918  T
Q  367 taccatagaatttgcc 382  Q
    ||||||| ||||||||    
T  3061917 taccatataatttgcc 3061902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 17334853 - 17334739
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||| |||||||||||||       ||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| ||    
T  17334853 gttgtcaatgatagaaaattattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccggtacacccaaattcattgg-tg 17334755  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  17334754 taccatagaatttgcc 17334739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 47069253 - 47069368
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       || |  ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  47069253 gttgtcaatgatagaaaataattatttttcttcaaaaaaacatcccatttattattaattttatgacttggtgtaccgatacatccaaatttattggatg 47069352  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  47069353 taccatagaatttgcc 47069368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 47220070 - 47219956
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||    
T  47220070 gttgtcaatgatagaaaataattatttttcttcaaaaaaa-aactcatttattattaattttacgatttggtgtaccgatacacccaaatttattgggtg 47219972  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  47219971 taccatagaatttgcc 47219956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 27130840 - 27130950
Alignment:
Q  273 aatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtacca 371  Q
    |||||||||||||||||||||||||||        ||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||||| |||||||    
T  27130840 aatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttatgacttggtgtaccggtacacccaaatttattgggtgtacca 27130939  T
Q  372 tagaatttgcc 382  Q
    |||||||||||    
T  27130940 tagaatttgcc 27130950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 380
Target Start/End: Original strand, 33704840 - 33704952
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||| |||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||| | ||||||||||   ||||| ||||||||    
T  33704840 gttgccaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttgatataccgatacatataaatttattggatg 33704938  T
Q  367 taccatagaatttg 380  Q
    ||||||||||||||    
T  33704939 taccatagaatttg 33704952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 39444080 - 39444004
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtacc 343  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||    
T  39444080 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacc 39444004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 45196800 - 45196853
Alignment:
Q  216 ataagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  45196800 ataagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 45196853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 9923185 - 9923120
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacga 332  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||    
T  9923185 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacga 9923120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 9915567 - 9915516
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  9915567 aagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 9915516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 9923479 - 9923428
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  9923479 aagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 9923428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 24505532 - 24505481
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  24505532 aagggaacttttatggtacactcacaattttgagtgtaccggtactcttgtt 24505481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 42039711 - 42039660
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  42039711 aagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 42039660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 3062301 - 3062251
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  3062301 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 3062251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 336 - 382
Target Start/End: Complemental strand, 17340839 - 17340794
Alignment:
Q  336 ggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  17340839 ggtgtaccgatacacccaaattcattgg-tgtaccatagaatttgcc 17340794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 1282592 - 1282543
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  1282592 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 1282543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 25867311 - 25867263
Alignment:
Q  221 ggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  25867311 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 25867263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 17335145 - 17335094
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||||  | ||||||||||||||||||||||||||| |||||||||||    
T  17335145 agggaacttcaacggtacacccacaattttgagtgtaccggtactcttgttg 17335094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 18922983 - 18922934
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| |||||||||||||||||  |||||||||||    
T  18922983 gggaacttctatggtacactcacaattttgagtgtactaatactcttgtt 18922934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 41715152 - 41715188
Alignment:
Q  233 gtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||| ||||||||||||||||||||||||||||||    
T  41715152 gtacactcacaattttgagtgtaccgatactcttgtt 41715188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 2038094 - 2038145
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    ||||||||| ||||||||| |||||||||||||||||| | || ||||||||    
T  2038094 agggaacttctatggtacatccacaattttgagtgtacaggtattcttgttg 2038145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 27800387 - 27800437
Alignment:
Q  334 ttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcctta 385  Q
    ||||||||||| ||||| ||||||  ||||||||||||||||||||||||||    
T  27800387 ttggtgtaccggtacactcaaattt-ttggatgtaccatagaatttgcctta 27800437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 32186421 - 32186472
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| || ||| |||||| ||||||||||||||||||| ||||||||||    
T  32186421 aagggaatttctatagtacactcacaattttgagtgtaccggtactcttgtt 32186472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 298
Target Start/End: Original strand, 16200821 - 16200851
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttctt 298  Q
    |||||||||||||||||||||||||||||||    
T  16200821 ttgtcaatgatagaaaataattatttttctt 16200851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 35357746 - 35357700
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    |||||||| ||||| |||||  |||||||||||||||||||||||||    
T  35357746 gtgtaccggtacactcaaatatattggatgtaccatagaatttgcct 35357700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 6791799 - 6791844
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||||||| |||||  ||||| ||||||||||||||||||    
T  6791799 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 6791844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 391
Target Start/End: Original strand, 30624082 - 30624138
Alignment:
Q  334 ttggtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaatataa 391  Q
    |||||||||| |||||| |||||| ||||| |||||||||||| |||||||| |||||    
T  30624082 ttggtgtaccaatacactcaaatt-attgggtgtaccatagaacttgccttattataa 30624138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 41913438 - 41913509
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaatataaa 392  Q
    ||||||||| | || |||||||||| |||||| ||||||  |||||||||||||| |||||||| |||||||||    
T  41913438 tattaatttaaggatttggtgtaccaatacactcaaattg-ttggatgtaccatataatttgcc-taatataaa 41913509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Original strand, 8648330 - 8648358
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttc 296  Q
    |||||||||||||||||||||||||||||    
T  8648330 ttgtcaatgatagaaaataattatttttc 8648358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 15091074 - 15091038
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtac 256  Q
    |||||||| |||||||||| |||||||||||||||||    
T  15091074 gggaacttttatggtacactcacaattttgagtgtac 15091038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 15954173 - 15954125
Alignment:
Q  340 taccgatacacccaaattcattggatgtaccatagaatttgccttaata 388  Q
    ||||| ||||| |||||  |||||||||||||||||||||| |||||||    
T  15954173 taccggtacactcaaatatattggatgtaccatagaatttggcttaata 15954125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Original strand, 22904785 - 22904813
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttc 296  Q
    |||||||||||||||||||||||||||||    
T  22904785 ttgtcaatgatagaaaataattatttttc 22904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 27427424 - 27427452
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  27427424 gttgtcaatgatagaaaataattattttt 27427452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 379
Target Start/End: Complemental strand, 28326743 - 28326684
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaattt 379  Q
    ||||||||| | || |||||||||| |||||| |||||| ||||||||||| |||||||||    
T  28326743 tattaatttaaggatttggtgtaccaatacactcaaatt-attggatgtacgatagaattt 28326684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 267 - 387
Target Start/End: Complemental strand, 33612638 - 33612518
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33612638 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaattttacgacttggtgtaccgatacacccaaattcattgggtg 33612539  T
Q  367 taccatagaatttgccttaat 387  Q
    |||||||||||||||||||||    
T  33612538 taccatagaatttgccttaat 33612518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 10779283 - 10779399
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  10779283 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggata 10779382  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  10779383 taccatagaatttgcct 10779399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 54499689 - 54499572
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  54499689 gttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtaccgatacatccaaattcactggatg 54499591  T
Q  367 taccatagaatttgcctta 385  Q
    |||||||||||||||||||    
T  54499590 taccatagaatttgcctta 54499572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 267 - 379
Target Start/End: Original strand, 23639527 - 23639639
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  23639527 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacactcaaatttattggatg 23639626  T
Q  367 taccatagaattt 379  Q
    |||||||||||||    
T  23639627 taccatagaattt 23639639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 36569763 - 36569647
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  36569763 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtg 36569664  T
Q  367 taccatagaatttgcct 383  Q
    ||||||| |||||||||    
T  36569663 taccatataatttgcct 36569647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 45629223 - 45629107
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||    
T  45629223 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgtaccgatacacccaaatttattgggtg 45629124  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  45629123 taccatagaatttgcct 45629107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 21515104 - 21514987
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||| |||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||    
T  21515104 gttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgatacacccaaatttattgggtg 21515005  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||||||||||||||    
T  21515004 taccatagaatttgcctt 21514987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 16004825 - 16004941
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  16004825 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatataccgatacacccaaatttattggatg 16004924  T
Q  367 taccatagaatttgcct 383  Q
    ||||||| |||||||||    
T  16004925 taccataaaatttgcct 16004941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 42244829 - 42244944
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||    
T  42244829 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccgatacatccaaatttattgggtg 42244928  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  42244929 taccatagaatttgcc 42244944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 48549958 - 48550073
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  48549958 gttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatccaaatttattgggtg 48550057  T
Q  367 taccatagaatttgcc 382  Q
    ||| ||||||||||||    
T  48550058 tacaatagaatttgcc 48550073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 24292092 - 24291978
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  24292092 gttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtaccaatacacccaaatttattgggtg 24291994  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  24291993 taccatagaatttgcc 24291978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 46222284 - 46222404
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn--caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgga 364  Q
    ||||||||||||||||||||||| |||||||||         ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  46222284 gttgtcaatgatagaaaataattgtttttcttcaaaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggg 46222383  T
Q  365 tgtaccatagaatttgcctta 385  Q
    |||||||||||||||||||||    
T  46222384 tgtaccatagaatttgcctta 46222404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 44998525 - 44998408
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||    
T  44998525 gttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttatgacttggtgtaccaatacacccaaatttattgggtg 44998427  T
Q  367 taccatagaatttgcctta 385  Q
    |||||||||||||||||||    
T  44998426 taccatagaatttgcctta 44998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 386
Target Start/End: Original strand, 46630937 - 46631057
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaa-ctgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        || || |||||||||||||| |||||||||||||||||||||||||||||| ||||| |    
T  46630937 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaactcatttattattaattgtacgacttggtgtaccgatacacccaaatttattgggt 46631036  T
Q  366 gtaccatagaatttgccttaa 386  Q
    |||||||||||||| ||||||    
T  46631037 gtaccatagaattttccttaa 46631057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 27967625 - 27967507
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttgg-tgtaccgatacacccaaattcattggat 365  Q
    |||| |||||||||||||||||||| |||||||       ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |    
T  27967625 gttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgacttgggtgtaccgatacacccaaatttattgggt 27967526  T
Q  366 gtaccatagaatttgcctt 384  Q
    ||| |||||||||||||||    
T  27967525 gtaacatagaatttgcctt 27967507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 267 - 380
Target Start/End: Original strand, 46633895 - 46634009
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |    
T  46633895 gttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatccaaatttattgggt 46633994  T
Q  366 gtaccatagaatttg 380  Q
    |||||||| ||||||    
T  46633995 gtaccataaaatttg 46634009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 38955334 - 38955454
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaat--tcattgga 364  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||| |||||| |||||  |  |||||    
T  38955334 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccaatacactcaaattattgttgga 38955433  T
Q  365 tgtaccatagaatttgcctta 385  Q
    |||||||| ||||||||||||    
T  38955434 tgtaccatggaatttgcctta 38955454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 27635854 - 27635736
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||| | ||||||||||||||| |||||||||||||| |||||||||||||| ||||  ||    
T  27635854 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaattcatttattattaatttaacgacttggtgtactgatacacccaaatttattgagtg 27635755  T
Q  367 taccatagaatttgcctta 385  Q
    |||| ||||||||| ||||    
T  27635754 taccgtagaatttgtctta 27635736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 385
Target Start/End: Complemental strand, 52257243 - 52257129
Alignment:
Q  271 tcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtacc 370  Q
    ||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||| |  | ||||||||||||||| ||||||| ||||    
T  52257243 tcaatgatagaaaataattatttttctttaaaaaaacaactcatttattattaattttacgacttgatacatcgatacacccaaatttattggatatacc 52257144  T
Q  371 atagaatttgcctta 385  Q
    |||||||||||||||    
T  52257143 atagaatttgcctta 52257129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 54505857 - 54505973
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        ||||  ||||||||||||||| || | |||||||||||||||||||||||| ||||| |    
T  54505857 gttgtcaatgatagaaaataattatttttcttcaaaaaaaacaaccaatttattattaatttaacaaattggtgtaccgatacacccaaatttattgggt 54505956  T
Q  366 gtaccatagaatttgcc 382  Q
    |||||||||||||||||    
T  54505957 gtaccatagaatttgcc 54505973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 23645231 - 23645297
Alignment:
Q  313 atttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaattt 379  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  23645231 atttattattaattttacgacttggtgtaccgatacactcaaatttattggatgtaccatagaattt 23645297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 42680882 - 42680999
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||| ||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||| |||| ||||| | ||||| | | ||||    
T  42680882 gttgccaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtataccaatacatctaaatttagtagatg 42680981  T
Q  367 taccatagaatttgcctt 384  Q
    |||| |||||||||||||    
T  42680982 taccgtagaatttgcctt 42680999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 56016911 - 56016796
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||  | ||||||| |||||||||||||| |||||| ||||||||    
T  56016911 gttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaacctaacgacttagtgtaccgatacacacaaatttattggatg 56016812  T
Q  367 taccatagaatttgcc 382  Q
    ||||||| || |||||    
T  56016811 taccataaaaattgcc 56016796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 10972952 - 10973008
Alignment:
Q  327 ttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  10972952 ttacgacttggtgtaccgatacacccaaatttattggatataccatagaatttgcct 10973008  T

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Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 9813613 - 9813743
Alignment:
Q  47 cttttatgttgttgtttgcatgtgatttgagtccttattccataattgtcgcaaagggtgaaatgg--cgaagaggaaaggaagatggttacatattagt 144  Q
    |||||||| |||| | | ||||| |||||||||||  || ||||||||| ||||| ||||||| |   | ||||| ||||||||  |||||||||| | |    
T  9813613 cttttatgctgttttctccatgtcatttgagtcctagttacataattgttgcaaacggtgaaaggaaacaaagagaaaaggaaggcggttacatatcaat 9813712  T
Q  145 aaatatggttttaagatgcttgaagttttca 175  Q
    ||||||||||| |||||||||||||||||||    
T  9813713 aaatatggtttgaagatgcttgaagttttca 9813743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 33612930 - 33612880
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  33612930 gggaacttctatggtacacccacaattttgagtgtaccggtactcttgttg 33612880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 2526286 - 2526171
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgta-ccgatacacccaaattcattggat 365  Q
    ||||||||||||| |||||||||| ||||||||       ||||| |||||||||||||||||||||  | |  | || ||||||||||||| ||||| |    
T  2526286 gttgtcaatgatataaaataattacttttcttcaaaaaaacaactcatttattattaattttacgac-cgatacacccaatacacccaaatttattgggt 2526188  T
Q  366 gtaccatagaatttgcc 382  Q
    |||||||||||||||||    
T  2526187 gtaccatagaatttgcc 2526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 2526579 - 2526529
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  2526579 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 2526529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 10778990 - 10779040
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  10778990 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 10779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 38955041 - 38955091
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  38955041 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 38955091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 42244537 - 42244586
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  42244537 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 42244586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 44998817 - 44998768
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  44998817 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 44998768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 48066349 - 48066420
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaatataa 391  Q
    ||||||||| | || ||||| |||| |||||| |||||  |||||||||||||||||||||||||||||||||    
T  48066349 tattaatttaatgatttggtataccaatacactcaaatg-attggatgtaccatagaatttgccttaatataa 48066420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 3716387 - 3716325
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||| | || |||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  3716387 tattaatttaaggatttggtgtaccaatacactcaaatt-attggatgtaccatagaatttgcc 3716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 46630643 - 46630694
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||| ||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  46630643 aaggaaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 46630694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 48549662 - 48549713
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| || ||| |||||| ||||||||||||||||||||||||||||||    
T  48549662 aagggaatttctatagtacactcacaattttgagtgtaccgatactcttgtt 48549713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 16004533 - 16004579
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactctt 266  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  16004533 gggaacttctatggtacactcacaattttgagtgtaccggtactctt 16004579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 27967918 - 27967868
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| ||||||||||||||||||  ||||||||||    
T  27967918 agggaacttctatggtacactcacaattttgagtgtaccagtactcttgtt 27967868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 16601724 - 16601634
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgattta-ttattaattttacgacttggtgtaccgatacacccaaatt 357  Q
    |||||||||||| ||||||||| |||||||||       ||||| ||||| |||||||||| |||| ||||||||||| ||||| ||||||    
T  16601724 ttgtcaatgataaaaaataattctttttcttcaaaaatacaactcatttaattattaatttaacgatttggtgtaccggtacactcaaatt 16601634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 36570055 - 36570006
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||  ||||||||||    
T  36570055 gggaacttctatggtacactcacaattttgagtgtaccagtactcttgtt 36570006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 19842502 - 19842435
Alignment:
Q  317 attattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcctta 385  Q
    ||||||||||| || | ||||||||| | ||||| ||||||  ||||||||||||||||||||||||||    
T  19842502 attattaatttaacaatttggtgtactggtacactcaaattt-ttggatgtaccatagaatttgcctta 19842435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 21515395 - 21515347
Alignment:
Q  221 ggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| |||| ||||| ||||||||||||||||||| ||||||||||    
T  21515395 ggaacttctatgatacactcacaattttgagtgtaccggtactcttgtt 21515347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 41760005 - 41760067
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||| | || |||||||||| |||||| ||||||  |||||||||||||||||||||||    
T  41760005 tattaatttaaggatttggtgtaccaatacactcaaattg-ttggatgtaccatagaatttgcc 41760067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 298
Target Start/End: Original strand, 42080619 - 42080650
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttctt 298  Q
    ||||||||||||||||||||||||||||||||    
T  42080619 gttgtcaatgatagaaaataattatttttctt 42080650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 352816 - 352882
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcctta 385  Q
    ||||||||| | || | ||||||||| |||||  ||||  |||||||||||||||||||||||||||    
T  352816 tattaatttaaagagtaggtgtaccggtacacttaaatatattggatgtaccatagaatttgcctta 352882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 3763160 - 3763114
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    |||||||||||||| |||||  ||| |||||||||||||||||||||    
T  3763160 gtgtaccgatacactcaaatatattagatgtaccatagaatttgcct 3763114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 382
Target Start/End: Original strand, 33491522 - 33491568
Alignment:
Q  336 ggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||| ||||| |||||  ||||||||||||||||||||||||    
T  33491522 ggtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 33491568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 50732906 - 50732860
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    |||||||||||||| |||||  | |||||||||||||||||||||||    
T  50732906 gtgtaccgatacactcaaatatagtggatgtaccatagaatttgcct 50732860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 39412461 - 39412493
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttc 299  Q
    ||||||||||||||||||||||| |||||||||    
T  39412461 gttgtcaatgatagaaaataattttttttcttc 39412493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 45754496 - 45754468
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  45754496 gttgtcaatgatagaaaataattattttt 45754468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 9226315 - 9226199
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9226315 gttgtcaatgatagaaaaaaattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgggtg 9226216  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  9226215 taccatagaatttgcct 9226199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 35225122 - 35225236
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35225122 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatg 35225221  T
Q  367 taccatagaatttgc 381  Q
    |||||||||||||||    
T  35225222 taccatagaatttgc 35225236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 32519024 - 32519141
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  32519024 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtg 32519123  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||| ||||||||||    
T  32519124 taccatataatttgcctt 32519141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 16989404 - 16989522
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||    
T  16989404 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaacttatttattattaattttatgacttggtgtaccgatacacccaaatttattgggtg 16989503  T
Q  367 taccatagaatttgcctta 385  Q
    ||||||| |||||| ||||    
T  16989504 taccataaaatttgtctta 16989522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 18871038 - 18870920
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||| ||        ||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18871038 gttgtcaatgatagaaaataattatttttcatcaaaaaaaacaactcatttattattaattttatgacttggtgtaccgatacacccaaatttattggat 18870939  T
Q  366 gtaccatagaatttgcctt 384  Q
    |||||||||||||||||||    
T  18870938 gtaccatagaatttgcctt 18870920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 1338969 - 1338853
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||| ||        ||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  1338969 gttgtcaatgatagaaaataattatttttcatcaaaaaaaacaactcatttattattaattttatgacttggtgtaccgatacacccaaatttattggat 1338870  T
Q  366 gtaccatagaatttgcc 382  Q
    |||||||||||||||||    
T  1338869 gtaccatagaatttgcc 1338853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 6016096 - 6016212
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       || || |||||||||||||||||||||||||||||||||||||  |||||| ||||| ||    
T  6016096 gttgtcaatgatagaaaataattatttttcttcaaaaaaacagcttatttattattaattttacgacttggtgtaccgatacattcaaatttattgggtg 6016195  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  6016196 taccatagaatttgcct 6016212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 34315416 - 34315530
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  34315416 gttgtcaatgatagaaaataattatttttctt-aaaaaaacaactg-tttattattaattttacgacttggtataccgatacacctaaattcattggatg 34315513  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  34315514 taccatagaatttgcct 34315530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 26810892 - 26810774
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||||||||| ||||| ||| | ||    
T  26810892 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgatacacctaaatttattaggtg 26810793  T
Q  367 taccatagaatttgcctta 385  Q
    ||||||||||||| |||||    
T  26810792 taccatagaatttacctta 26810774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 27719296 - 27719422
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgat--------acacccaaattc 358  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||        ||||||||||||    
T  27719296 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacactcaaacacccaaattc 27719395  T
Q  359 attggatgtaccatagaatttgcctta 385  Q
    ||||| ||||||||||||||| |||||    
T  27719396 attgggtgtaccatagaatttacctta 27719422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 24025646 - 24025531
Alignment:
Q  267 gttgtcaatgatagaaaata-attatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||  |||||||||||||       ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  24025646 gttgtcaatgatagaaaatttattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccgatacacccaaattcattgg-t 24025548  T
Q  366 gtaccatagaatttgcc 382  Q
    |||||||||||||||||    
T  24025547 gtaccatagaatttgcc 24025531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 267 - 354
Target Start/End: Complemental strand, 33954566 - 33954480
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaa 354  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33954566 gttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtaccgatacacccaa 33954480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 406 - 451
Target Start/End: Complemental strand, 18701846 - 18701801
Alignment:
Q  406 tatcagtaattgggaaatgtataagaatatttacttagataatatt 451  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18701846 tatcagtaattgggaaatgtataagaatatttacttagataatatt 18701801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 34969567 - 34969491
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtacc 343  Q
    |||||||||||||||||||||||||||||||||        |||| |||||||||||||||||||| ||||||||||    
T  34969567 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgatttggtgtacc 34969491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 34315123 - 34315174
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    ||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  34315123 agggaacttctatggtacacccacaattttgagtgtatcggtactcttgttg 34315174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 1339265 - 1339215
Alignment:
Q  216 ataagggaacttgtatggtacacccacaattttgagtgtaccgatactctt 266  Q
    |||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  1339265 ataagggaacttctatggtacactcacaattttgagtgtaccggtactctt 1339215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 34969839 - 34969790
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  34969839 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 34969790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 24025842 - 24025791
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||||  | ||||||||||||||||||||||||||| |||||||||||    
T  24025842 agggaacttcaacggtacacccacaattttgagtgtaccggtactcttgttg 24025791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 29639026 - 29639110
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttgg-tgtaccgatacacc 351  Q
    ||||||||||||||||||| ||||| |||||||       ||||| ||||||||||||||||| ||||||| ||||||||||||||    
T  29639026 gttgtcaatgatagaaaatgattatgtttcttcaaaaaa-caactcatttattattaattttatgacttggatgtaccgatacacc 29639110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 35224827 - 35224878
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||| |||||    
T  35224827 aagggaacttctatggtacactcacaattttgagtgtaccggtactattgtt 35224878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 18871330 - 18871284
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactctt 266  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  18871330 gggaacttctatggtacactcacaattttgagtgtaccggtactctt 18871284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 386
Target Start/End: Complemental strand, 21181253 - 21181135
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgattt-attattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||| ||||||||||||||       |||||  ||| | ||| ||||| | || ||||||||||||||||| ||||||  |||  ||    
T  21181253 ttgtcaatgatagaaaacaattatttttcttcgaaaaaacaacttgtttcaatataaatttgatgatttggtgtaccgatacactcaaattt-ttgagtg 21181155  T
Q  367 taccatagaatttgccttaa 386  Q
    ||||||||||||||||||||    
T  21181154 taccatagaatttgccttaa 21181135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 29638734 - 29638783
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||  ||||||||||    
T  29638734 gggaacttctatggtacactcacaattttgagtgtaccagtactcttgtt 29638783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 9226610 - 9226570
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccg 258  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  9226610 aagggaacttctatgctacacccacaattttgagtgtaccg 9226570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 8549916 - 8549961
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||||||| |||||  ||||| ||||||||||||||||||    
T  8549916 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 8549961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 390
Target Start/End: Complemental strand, 1705653 - 1705598
Alignment:
Q  334 ttggtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaatata 390  Q
    ||||||||||||||||| ||||||  |||  ||||||||||||||||||| ||||||    
T  1705653 ttggtgtaccgatacactcaaattt-ttgagtgtaccatagaatttgcctaaatata 1705598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 11273708 - 11273736
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  11273708 gttgtcaatgatagaaaataattattttt 11273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 14715558 - 14715586
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  14715558 gttgtcaatgatagaaaataattattttt 14715586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 24151417 - 24151445
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  24151417 gttgtcaatgatagaaaataattattttt 24151445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 32518748 - 32518784
Alignment:
Q  221 ggaacttgtatggtacacccacaattttgagtgtacc 257  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  32518748 ggaacttctatggtacactcacaattttgagtgtacc 32518784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 32834118 - 32834181
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || |||||||||| |||||| |||||| ||| | |||||||||||||||||||    
T  32834118 tattaatttaatgatttggtgtaccaatacactcaaatt-attaggtgtaccatagaatttgcct 32834181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 4e-42; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 48480965 - 48480849
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  48480965 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgggta 48480866  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  48480865 taccatagaatttgcct 48480849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 3150477 - 3150595
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3150477 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatg 3150576  T
Q  367 taccatagaatttgcctta 385  Q
    ||||||||||||| |||||    
T  3150577 taccatagaatttacctta 3150595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 267 - 380
Target Start/End: Complemental strand, 17376470 - 17376357
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17376470 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatg 17376371  T
Q  367 taccatagaatttg 380  Q
    ||||||||||||||    
T  17376370 taccatagaatttg 17376357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 5057314 - 5057199
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  5057314 gttgtcaatgatagaaaataattatttttcttcaaaaaaataactgatttattattaattttacgacttggtgtaccgatacacctaaattcattgggtg 5057215  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  5057214 taccatagaatttgcc 5057199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 267 - 386
Target Start/End: Original strand, 33829157 - 33829276
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| || |||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  33829157 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatctattattaattttacgacttggtgtaccaatacacccaaatttattggatg 33829256  T
Q  367 taccatagaatttgccttaa 386  Q
    ||||||||||||||||||||    
T  33829257 taccatagaatttgccttaa 33829276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 267 - 386
Target Start/End: Complemental strand, 33838809 - 33838690
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| || |||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  33838809 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatctattattaattttacgacttggtgtaccaatacacccaaatttattggatg 33838710  T
Q  367 taccatagaatttgccttaa 386  Q
    ||||||||||||||||||||    
T  33838709 taccatagaatttgccttaa 33838690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 14191005 - 14190888
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  14191005 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtg 14190906  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||| ||||||||||    
T  14190905 taccataaaatttgcctt 14190888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 7426952 - 7427068
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||    
T  7426952 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgatacacccaaatttattgggtg 7427051  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  7427052 taccatagaatttgcct 7427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 25493613 - 25493497
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  25493613 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccaatacacccaaatttattggatg 25493514  T
Q  367 taccatagaatttgcct 383  Q
    |||||||||||||||||    
T  25493513 taccatagaatttgcct 25493497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 10061272 - 10061157
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||    
T  10061272 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtactgatacacccaaatttattgaatg 10061173  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  10061172 taccatagaatttgcc 10061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 24248094 - 24248209
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||| |||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  24248094 gttgtcaatgatataaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattagatg 24248193  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  24248194 taccatagaatttgcc 24248209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 29171280 - 29171165
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||    
T  29171280 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcgatacacccaaattcactgggtg 29171181  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  29171180 taccatagaatttgcc 29171165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 43224937 - 43225052
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||    
T  43224937 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccgatacacccaaatttattgggtg 43225036  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  43225037 taccatagaatttgcc 43225052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 267 - 377
Target Start/End: Original strand, 52274011 - 52274121
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  52274011 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatccaaatttattggatg 52274110  T
Q  367 taccatagaat 377  Q
    |||||||||||    
T  52274111 taccatagaat 52274121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 267 - 380
Target Start/End: Original strand, 8569268 - 8569381
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  8569268 gttgtcaatgatagaaaataattatttttcttcaaaagaaaaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtg 8569367  T
Q  367 taccatagaatttg 380  Q
    ||||||||||||||    
T  8569368 taccatagaatttg 8569381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 383
Target Start/End: Original strand, 1658833 - 1658948
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgt 367  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||| |||||||| |  |||    
T  1658833 ttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgatacaccaaaattcatcgagtgt 1658932  T
Q  368 accatagaatttgcct 383  Q
    ||||||||||||||||    
T  1658933 accatagaatttgcct 1658948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 27801925 - 27801810
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  27801925 gttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatccaaatttattgggtg 27801826  T
Q  367 taccatagaatttgcc 382  Q
    ||| ||||||||||||    
T  27801825 tacaatagaatttgcc 27801810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 273 - 380
Target Start/End: Original strand, 47861024 - 47861131
Alignment:
Q  273 aatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccat 372  Q
    |||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  47861024 aatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtacgat 47861123  T
Q  373 agaatttg 380  Q
    ||||||||    
T  47861124 agaatttg 47861131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 271 - 385
Target Start/End: Original strand, 9260112 - 9260226
Alignment:
Q  271 tcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtacc 370  Q
    |||||||||||||||||||||||||||||        |||| |||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  9260112 tcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttgatgtaccgatacatccaaattcattgggtgtacc 9260211  T
Q  371 atagaatttgcctta 385  Q
    |||||||||||||||    
T  9260212 atagaatttgcctta 9260226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 40850136 - 40850022
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||||||         |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40850136 gttgtcaatgatagaaaataattatttttcttaaaaaaa--aactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatg 40850039  T
Q  367 taccatagaatttgcct 383  Q
    ||| |||||||||||||    
T  40850038 tactatagaatttgcct 40850022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 48868355 - 48868470
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||| |||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  48868355 gttgttaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggaataccgatacacccaaatttattggatg 48868454  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||| ||||||    
T  48868455 taccatagactttgcc 48868470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 49739258 - 49739140
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||| || | |||||||||||||||||||||||| || |||||    
T  49739258 gttgtcaatgatagaaaataattatttttcttcaaaaaaataactaatttattattaatttaacaaattggtgtaccgatacacccaaatttatcggatg 49739159  T
Q  367 taccatagaatttgcctta 385  Q
    |||||||||||||||||||    
T  49739158 taccatagaatttgcctta 49739140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 267 - 380
Target Start/End: Complemental strand, 39853072 - 39852959
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||    
T  39853072 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcgatacacctaaatttattgggtg 39852973  T
Q  367 taccatagaatttg 380  Q
    ||| ||||||||||    
T  39852972 tactatagaatttg 39852959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 9223146 - 9223262
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnnc-aactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||         |||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| |    
T  9223146 gttgtcaatgatagaaaataattatttttcttcaaaaaaaataactcatttattattaattttacgatttggtgtaccgatacacccaaatttattgggt 9223245  T
Q  366 gtaccatagaatttgcc 382  Q
    |||||||||||||||||    
T  9223246 gtaccatagaatttgcc 9223262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 269 - 380
Target Start/End: Complemental strand, 22821361 - 22821249
Alignment:
Q  269 tgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgt 367  Q
    |||||||||||||||||||||||||||||||        ||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  22821361 tgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaatttaacgacttggtgtaccgatacatccaaatttattggatgt 22821262  T
Q  368 accatagaatttg 380  Q
    |||||||||||||    
T  22821261 accatagaatttg 22821249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 379
Target Start/End: Original strand, 44647537 - 44647649
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||  | ||    
T  44647537 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatccaaatttatcaggtg 44647636  T
Q  367 taccatagaattt 379  Q
    |||||||||||||    
T  44647637 taccatagaattt 44647649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 46872484 - 46872368
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  46872484 gttgtcaatcatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccaatacacccaaatttattgggtg 46872385  T
Q  367 taccatagaatttgcct 383  Q
    || ||||||||||||||    
T  46872384 tatcatagaatttgcct 46872368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 27038658 - 27038543
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| |||||||||||||||||||||||||||||||||||||| |||||| |||| |||    
T  27038658 gttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccgatacactcaaatttattgaatg 27038559  T
Q  367 taccatagaatttgcc 382  Q
    ||| ||| ||||||||    
T  27038558 tactataaaatttgcc 27038543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 28095040 - 28095156
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||| | ||||||||||||||| | || |||||||||||||| ||||||||| ||||||||    
T  28095040 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaattaatttattattaatttaatgaattggtgtaccgata-acccaaatttattggatg 28095138  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||||||||||||||    
T  28095139 taccatagaatttgcctt 28095156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 50502636 - 50502756
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacaccc----aaattcattg 362  Q
    ||||||||||||||||| |||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||    ||||||||||    
T  50502636 gttgtcaatgatagaaattaattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaattaaattcattg 50502735  T
Q  363 gatgtaccatagaatttgcct 383  Q
    | |||| |||| |||||||||    
T  50502736 ggtgtatcataaaatttgcct 50502756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 357
Target Start/End: Original strand, 31571261 - 31571351
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaatt 357  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  31571261 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatagacccaaatt 31571351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 37765545 - 37765662
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||| ||| ||||||||| ||||||| ||||| |    
T  37765545 gttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttagtgcaccgatacatccaaatttattgggt 37765644  T
Q  366 gtaccatagaatttgcct 383  Q
    | ||||||||||||||||    
T  37765645 gcaccatagaatttgcct 37765662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 379
Target Start/End: Complemental strand, 41321120 - 41321008
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||||| |       ||||  ||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||    
T  41321120 gttgtcaatgatagaaaataattatttttctacaaaaaaacaacacattcattattaattttacgacttggtgaaccgatacacccaaatttattgggtg 41321021  T
Q  367 taccatagaattt 379  Q
    |||| ||||||||    
T  41321020 taccgtagaattt 41321008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 33234346 - 33234461
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||| |  | |||||||||||||||||||||||| ||||| ||    
T  33234346 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaataaattggtgtaccgatacacccaaatttattgggtg 33234445  T
Q  367 taccatagaatttgcc 382  Q
    ||| | ||||||||||    
T  33234446 tactacagaatttgcc 33234461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 2684125 - 2684011
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||| ||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||| |||| ||||||| ||||||| ||| | ||    
T  2684125 gttgacaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttgatgtatcgatacatccaaatttattaggtg 2684027  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  2684026 taccatagaatttgcc 2684011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 267 - 381
Target Start/End: Complemental strand, 20280336 - 20280223
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||| |||||||||||||||||||||        ||||| ||||||||||||||| | || |||||||||||||||||||||||| |||| |||    
T  20280336 gttgtcaatggtagaaaataattatttttctt-aaaaaaacaactaatttattattaatttaatgaattggtgtaccgatacacccaaatttattgaatg 20280238  T
Q  367 taccatagaatttgc 381  Q
    |||||||||||||||    
T  20280237 taccatagaatttgc 20280223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 316 - 382
Target Start/End: Original strand, 14131690 - 14131756
Alignment:
Q  316 tattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  14131690 tattattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 14131756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 267 - 380
Target Start/End: Original strand, 10635688 - 10635802
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    ||||||||||||||||||||||||||||||| |        ||||| |||||||||||| |||||||||||||||||||||||| ||||| | ||| | |    
T  10635688 gttgtcaatgatagaaaataattatttttctccaaaaaaaacaactcatttattattaactttacgacttggtgtaccgatacatccaaaattattaggt 10635787  T
Q  366 gtaccatagaatttg 380  Q
    |||||||||||||||    
T  10635788 gtaccatagaatttg 10635802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 322 - 383
Target Start/End: Complemental strand, 49686045 - 49685984
Alignment:
Q  322 taattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  49686045 taattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 49685984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 52079558 - 52079440
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn--caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattgga 364  Q
    |||||||| |||||||||||||||||||||||          ||||| |||||||||||||||||| |||| ||||||||||||| ||||||| |||| |    
T  52079558 gttgtcaaagatagaaaataattatttttcttaaaaaaaaaacaactcatttattattaattttacaacttagtgtaccgatacatccaaatttattgaa 52079459  T
Q  365 tgtaccatagaatttgcct 383  Q
    |||||||| ||||||||||    
T  52079458 tgtaccattgaatttgcct 52079440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 5057610 - 5057556
Alignment:
Q  216 ataagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  5057610 ataagggaacttctatggtacacccacaattttgagtgtaccggtactcttgttg 5057556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 2249080 - 2248968
Alignment:
Q  47 cttttatgttgttgtttgcatgtgatttgagtccttattccataattgtcgcaaagggtgaaatg----gcgaagaggaaaggaagatggttacatatta 142  Q
    ||||||||||||| | | ||||| ||||||||||| ||| ||||||||| ||||||||||||| |     ||||||||||||||||   ||||||||| |    
T  2249080 cttttatgttgttttctccatgtcatttgagtcctaatttcataattgttgcaaagggtgaaaggagacacgaagaggaaaggaaggcagttacatatca 2248981  T
Q  143 gtaaatatggttt 155  Q
    |||||||||||||    
T  2248980 gtaaatatggttt 2248968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 1658545 - 1658599
Alignment:
Q  216 ataagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  1658545 ataagggaacttctatggtacacccacaattttgagtgtaccggtattcttgttg 1658599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 48481256 - 48481206
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  48481256 gggaacttctatggtacacccacaattttgagtgtaccggtactcttgttg 48481206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 10061566 - 10061515
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  10061566 aagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 10061515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 14131350 - 14131401
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  14131350 aagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 14131401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 41550439 - 41550550
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgt 367  Q
    |||||||||| | |||||||||||||||||||       ||||| ||||||||||||||| |  | ||||| |||||||||||||||||| |||   |||    
T  41550439 ttgtcaatgagaaaaaataattatttttcttcaaaaaaacaactaatttattattaatttaataaattggtataccgatacacccaaatttatt---tgt 41550535  T
Q  368 accatagaatttgcc 382  Q
    ||| |||||||||||    
T  41550536 accctagaatttgcc 41550550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 29207669 - 29207615
Alignment:
Q  216 ataagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||||||||| |||| |||| |||||||||||||| |||||||||||||||||    
T  29207669 ataagggaacttctatgatacatccacaattttgagtataccgatactcttgttg 29207615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 37765253 - 37765302
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  37765253 gggaacttttatggtacactcacaattttgagtgtaccggtactcttgtt 37765302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 31015889 - 31015937
Alignment:
Q  221 ggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  31015889 ggaacttctatggtacactcacaattttaagtgtaccgatactcttgtt 31015937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 31570972 - 31571020
Alignment:
Q  221 ggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  31570972 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 31571020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 48868059 - 48868111
Alignment:
Q  217 taagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||    
T  48868059 taagggaacttctatgatacactcacaattttgagtgtaccggtactcttgtt 48868111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 9222856 - 9222903
Alignment:
Q  222 gaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  9222856 gaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 9222903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 383
Target Start/End: Original strand, 24230931 - 24230978
Alignment:
Q  336 ggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||    
T  24230931 ggtgtaccgatacactcaaatatattggatgtaccatagaatttgcct 24230978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 29171574 - 29171523
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| ||| |||||| ||||||||||||||||||| ||||||||||    
T  29171574 aagggaacttctatcgtacactcacaattttgagtgtaccggtactcttgtt 29171523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 33771936 - 33772011
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtacc 343  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||| |||| ||||||||||    
T  33771936 gttgtcaatgatagaaaataattatttttctt-aaaaaaacaactaatttattattaatttaacgaattggtgtacc 33772011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 39853368 - 39853317
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| || |||||||||||||||| ||||||||||    
T  39853368 aagggaacttctatggtacactcataattttgagtgtaccggtactcttgtt 39853317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 40850430 - 40850379
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| ||||||||||||||||||| || |||||||    
T  40850430 aagggaacttctatggtacactcacaattttgagtgtaccggtattcttgtt 40850379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 47860753 - 47860804
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||||| |||||||||| |||||||||||||||| || ||||||||||    
T  47860753 aagggaacttctatggtacactcacaattttgagtgtatcggtactcttgtt 47860804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 49289227 - 49289278
Alignment:
Q  218 aagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| || |||||||||| ||||||||||||||||||| ||||||||||    
T  49289227 aagggaatttctatggtacactcacaattttgagtgtaccggtactcttgtt 49289278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 3150184 - 3150234
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| |||||||||||||||| || ||||||||||    
T  3150184 agggaacttctatggtacactcacaattttgagtgtatcggtactcttgtt 3150234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 43224645 - 43224691
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactctt 266  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  43224645 gggaacttctatggtacactcacaattttgagtgtaccggtactctt 43224691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 52273718 - 52273768
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||| |||||    
T  52273718 agggaacttctatggtacactcacaattttgagtgtaccgttacttttgtt 52273768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 2684375 - 2684326
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||||||    
T  2684375 gggaacttctatggtacactcataattttgagtgtaccggtactcttgtt 2684326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 9259816 - 9259865
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||| ||||||| ||||||||||    
T  9259816 gggaacttctatggtacactcacaattttgaatgtaccggtactcttgtt 9259865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 329
Target Start/End: Original strand, 31016159 - 31016221
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaatttta 329  Q
    |||||||||||||||||||||||||||||||||       ||||  |||||||||||||||||    
T  31016159 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaacacatttattattaatttta 31016221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 50502344 - 50502393
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||  ||||||||||||||||||| ||||||||||    
T  50502344 gggaacttctatggtacattcacaattttgagtgtaccggtactcttgtt 50502393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 27038947 - 27038904
Alignment:
Q  223 aacttgtatggtacacccacaattttgagtgtaccgatactctt 266  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||    
T  27038947 aacttctatggtacactcacaattttgagtgtaccggtactctt 27038904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 34256517 - 34256451
Alignment:
Q  317 attattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcctt 384  Q
    ||||||||||| |  | ||||||||||||||||| ||||||  |||| ||||||||||||||||||||    
T  34256517 attattaatttaataatttggtgtaccgatacactcaaattg-ttgggtgtaccatagaatttgcctt 34256451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 44647247 - 44647294
Alignment:
Q  222 gaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||| ||||||| || ||||||||||||||||||| ||||||||||    
T  44647247 gaacttctatggtagactcacaattttgagtgtaccggtactcttgtt 44647294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 51787812 - 51787875
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||| | || | ||||||||| ||||| |||||  ||||||||||||||||||||||||    
T  51787812 tattaatttaaagaatgggtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 51787875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 298
Target Start/End: Complemental strand, 22864783 - 22864753
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttctt 298  Q
    |||||||||||||||||||||||||||||||    
T  22864783 ttgtcaatgatagaaaataattatttttctt 22864753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 32710106 - 32710152
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    |||||||| ||||| |||||  |||||||||||||||||||||||||    
T  32710106 gtgtaccggtacactcaaatatattggatgtaccatagaatttgcct 32710152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 34038526 - 34038572
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||| |||||| |||||  |||||||||||||||||||||||||    
T  34038526 gtgtaccaatacactcaaatatattggatgtaccatagaatttgcct 34038572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 41321413 - 41321363
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| ||||||||||||||||  | ||||||||||    
T  41321413 agggaacttctatggtacactcacaattttgagtgtattggtactcttgtt 41321363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 298
Target Start/End: Original strand, 48313601 - 48313631
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttctt 298  Q
    |||||||||||||||||||||||||||||||    
T  48313601 ttgtcaatgatagaaaataattatttttctt 48313631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 477796 - 477841
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||||||| |||||  ||||| ||||||||||||||||||    
T  477796 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 16482638 - 16482574
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcctt 384  Q
    ||||||||| | || |||||||||| ||||||  ||||| ||||| ||||||||||||||||||||    
T  16482638 tattaatttaaggatttggtgtaccaatacacttaaatt-attgggtgtaccatagaatttgcctt 16482574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 17554179 - 17554228
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgccttaa 386  Q
    |||||||| ||||| |||||  ||||| ||||||||||||||||||||||    
T  17554179 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgccttaa 17554228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 31075952 - 31076017
Alignment:
Q  317 attattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||||| | || | ||||||||| ||||| |||||  ||||| ||||||||||||||||||    
T  31075952 attattaatttaatgaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 31076017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 52079839 - 52079790
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||| ||||| || |||||||||||||||| ||||||||||    
T  52079839 gggaacttctatgatacactcataattttgagtgtaccggtactcttgtt 52079790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 5957550 - 5957578
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  5957550 gttgtcaatgatagaaaataattattttt 5957578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Original strand, 13216389 - 13216417
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttc 296  Q
    |||||||||||||||||||||||||||||    
T  13216389 ttgtcaatgatagaaaataattatttttc 13216417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 31931042 - 31931105
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || ||| |||||| |||||| ||||||  ||||||||||||||||||||||||    
T  31931042 tattaatttaaggatttgatgtaccaatacactcaaattg-ttggatgtaccatagaatttgcct 31931105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 37498791 - 37498744
Alignment:
Q  334 ttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||| |||||| ||||||  |||||||||||||||||||||||    
T  37498791 ttggtgtaccaatacactcaaattg-ttggatgtaccatagaatttgcc 37498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 38260865 - 38260801
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || | ||||||||| ||||| |||||  ||| |||||||||||||||||||||    
T  38260865 tattaatttaaagagtgggtgtaccggtacactcaaatatattagatgtaccatagaatttgcct 38260801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Complemental strand, 41568558 - 41568530
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttc 296  Q
    |||||||||||||||||||||||||||||    
T  41568558 ttgtcaatgatagaaaataattatttttc 41568530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Complemental strand, 43536990 - 43536962
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttc 296  Q
    |||||||||||||||||||||||||||||    
T  43536990 ttgtcaatgatagaaaataattatttttc 43536962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Complemental strand, 46282055 - 46282027
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttc 296  Q
    |||||||||||||||||||||||||||||    
T  46282055 ttgtcaatgatagaaaataattatttttc 46282027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 50534176 - 50534204
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  50534176 gttgtcaatgatagaaaataattattttt 50534204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 388
Target Start/End: Original strand, 50631897 - 50632005
Alignment:
Q  280 gaaaataattatttttcttcnnnnnnncaactgattta-ttattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatt 378  Q
    |||| |||||||||||||||       ||||| ||||| |||||||||| |||  ||||||||||| ||||| |||||| ||||| |||||||| |||||    
T  50631897 gaaagtaattatttttcttcaaaaaatcaactcatttaattattaatttaacgctttggtgtaccggtacactcaaatt-attgggtgtaccatggaatt 50631995  T
Q  379 tgccttaata 388  Q
    | ||| ||||    
T  50631996 ttcctaaata 50632005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 51781448 - 51781507
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaattt 379  Q
    ||||||||| | || |||||||||| |||||| |||||| ||||| |||||||||||||||    
T  51781448 tattaatttaaggatttggtgtaccaatacactcaaatt-attgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 166709 - 166826
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  166709 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgaatg 166808  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||||||||||||||    
T  166809 taccatagaatttgcctt 166826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 166418 - 166468
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||  ||||||||||||||||||| ||||||||||    
T  166418 agggaacttatatggtacattcacaattttgagtgtaccggtactcttgtt 166468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 12266368 - 12266486
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||    
T  12266368 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgatacacccaaattcaatgggtg 12266467  T
Q  367 taccatagaatttgcctta 385  Q
    |||||||||||||| ||||    
T  12266468 taccatagaatttgtctta 12266486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 45393738 - 45393855
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  45393738 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtaccgatacatccaaatttattggatg 45393837  T
Q  367 taccatagaatttgcctt 384  Q
    ||||||||||||||||||    
T  45393838 taccatagaatttgcctt 45393855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 28897195 - 28897310
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||    
T  28897195 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccaatacacccaaatttattgggtg 28897294  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  28897295 taccatagaatttgcc 28897310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 267 - 389
Target Start/End: Original strand, 27101103 - 27101226
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnn-caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  27101103 gttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaatttaacgacttggtgtaccgatacacctaaatttattggat 27101202  T
Q  366 gtaccatagaatttgccttaatat 389  Q
    ||||||||||| ||||||| ||||    
T  27101203 gtaccatagaaattgcctttatat 27101226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 45401263 - 45401145
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||| ||||    
T  45401263 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttgatgtaccgatacatccaaatttattagatg 45401164  T
Q  367 taccatagaatttgcctta 385  Q
    ||||||||||||| |||||    
T  45401163 taccatagaatttacctta 45401145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 267 - 388
Target Start/End: Original strand, 37404894 - 37405015
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||     
T  37404894 gttgtcaatgatagaaaataattatttttcttcaaaaaaagaactcatttattattaattttatgacttggtgtaccgatacacccaaatttattagata 37404993  T
Q  367 taccatagaatttgccttaata 388  Q
    || |||||||||||||| ||||    
T  37404994 tatcatagaatttgcctaaata 37405015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 21835546 - 21835430
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||| ||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  21835546 gttgccaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccgatacagccaaatttattgggtg 21835447  T
Q  367 taccatagaatttgcct 383  Q
    || ||||||||||||||    
T  21835446 taacatagaatttgcct 21835430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 379
Target Start/End: Complemental strand, 36835457 - 36835345
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| |||||||||||||| |||||||||||||||||||||||||||||| ||| | ||    
T  36835457 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaacttatttattattaattgtacgacttggtgtaccgatacacccaaatttatttggtg 36835358  T
Q  367 taccatagaattt 379  Q
    |||||||||||||    
T  36835357 taccatagaattt 36835345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 379
Target Start/End: Original strand, 37766594 - 37766706
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||| |||||||||| ||||||| ||| | ||    
T  37766594 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtataccgatacatccaaatttattaggtg 37766693  T
Q  367 taccatagaattt 379  Q
    |||||||||||||    
T  37766694 taccatagaattt 37766706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 196357 - 196471
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||||||||||| ||| ||||| |||| |||    
T  196357 gttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccgataaacctaaatttattgaatg 196455  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  196456 taccatagaatttgcc 196471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 311194 - 311308
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||||||||||| ||| ||||| |||| |||    
T  311194 gttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccgataaacctaaatttattgaatg 311292  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  311293 taccatagaatttgcc 311308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 3052914 - 3052799
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||| |||| |||||||||||||||| ||||||| |||||||     
T  3052914 gttgtcaatgatagaaaataattatttttcttcaaaaaaataactaatttattattaatttaacgaattggtgtaccgatacatccaaatttattggata 3052815  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  3052814 taccatagaatttgcc 3052799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 29039904 - 29040019
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||| |||||||||||       ||||| ||||||||||||||| | || |||||||||||||||||||||||| ||| ||||    
T  29039904 gttgtcaatgatagaaaataaatatttttcttcaaaaaaacaactaatttattattaatttaatgaattggtgtaccgatacacccaaatttatttgatg 29040003  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  29040004 taccatagaatttgcc 29040019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 7223598 - 7223489
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||      ||||||    
T  7223598 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacatccaa------tggatg 7223505  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  7223504 taccatagaatttgcc 7223489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 38971579 - 38971463
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||  |||||||| |||||||||||||| ||||||| ||||||||    
T  38971579 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaaacttacgactaggtgtaccgatacaaccaaatttattggatg 38971480  T
Q  367 taccatagaatttgcct 383  Q
    || | ||||||||||||    
T  38971479 tatcgtagaatttgcct 38971463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 39002677 - 39002561
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||  |||||||| |||||||||||||| ||||||| ||||||||    
T  39002677 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaaacttacgactaggtgtaccgatacaaccaaatttattggatg 39002578  T
Q  367 taccatagaatttgcct 383  Q
    || | ||||||||||||    
T  39002577 tatcgtagaatttgcct 39002561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 1426620 - 1426735
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||| || |||||| ||||| |     
T  1426620 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgacttggtgtaccgatatactcaaatttattgggtc 1426719  T
Q  367 taccatagaatttgcc 382  Q
    ||||||| ||||||||    
T  1426720 taccatacaatttgcc 1426735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 382
Target Start/End: Original strand, 14914154 - 14914220
Alignment:
Q  316 tattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14914154 tattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcc 14914220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 380
Target Start/End: Complemental strand, 464364 - 464250
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaa-ctgatttattattaattttacgacttggtgtaccgatacacccaaattcattggat 365  Q
    |||||||||||||||||||||||||||||||||        || || |||||||||||||||||||| || ||||||||||||||||||||| ||||| |    
T  464364 gttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaactcatttattattaattttacgagttagtgtaccgatacacccaaatttattgggt 464265  T
Q  366 gtaccatagaatttg 380  Q
    |||||||||||||||    
T  464264 gtaccatagaatttg 464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 382
Target Start/End: Original strand, 29565687 - 29565756
Alignment:
Q  313 atttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  29565687 atttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 29565756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 38803549 - 38803434
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||| | ||    
T  38803549 gttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgcaccgatacatccaaatttattaggtg 38803450  T
Q  367 taccatagaatttgcc 382  Q
    |||  |||||||||||    
T  38803449 tacagtagaatttgcc 38803434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 38627102 - 38627026
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtacc 343  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||    
T  38627102 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacc 38627026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 18844451 - 18844534
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacac 350  Q
    ||||||||||||| |||||||||||||||||||       ||||| ||||||||||||||| ||||||||||||||||||||||    
T  18844451 gttgtcaatgataaaaaataattatttttcttcaaaaaatcaactcatttattattaatttaacgacttggtgtaccgatacac 18844534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 43183017 - 43183098
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgataca 349  Q
    ||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||||||||||||    
T  43183017 gttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccgataca 43183098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 380
Target Start/End: Original strand, 41572002 - 41572113
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgt 367  Q
    ||||||||||||||||||||||||| ||||||       ||||| ||||||||||||||| || | || ||||||||||| | ||||||| ||||| |||    
T  41572002 ttgtcaatgatagaaaataattattcttcttcaaaaaa-caactaatttattattaatttaacaaattagtgtaccgatatatccaaatttattgggtgt 41572100  T
Q  368 accatagaatttg 380  Q
    |||||| ||||||    
T  41572101 accatataatttg 41572113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 12266073 - 12266121
Alignment:
Q  222 gaacttgtatggtacacccacaattttgagtgtaccgatactcttgttg 270  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  12266073 gaacttctatggtacacccacaattttgagtgtaccggtactcttgttg 12266121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 28896904 - 28896954
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  28896904 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 28896954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 36835749 - 36835700
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  36835749 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 36835700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 15726234 - 15726297
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || |||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  15726234 tattaatttaaggatttggtgtaccaatacactcaaatt-attggatgtaccatagaatttgcct 15726297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 35037869 - 35037821
Alignment:
Q  221 ggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  35037869 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 35037821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 7223888 - 7223841
Alignment:
Q  222 gaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  7223888 gaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 7223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 14913843 - 14913893
Alignment:
Q  219 agggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||| ||||| |||| ||||||||||||||||||| ||||||||||    
T  14913843 agggaacttctatggcacactcacaattttgagtgtaccggtactcttgtt 14913893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 196066 - 196115
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||| ||| ||||||||||    
T  196066 gggaacttctatggtacactcacaattttgagtgtgccggtactcttgtt 196115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 310903 - 310952
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||| ||| ||||||||||    
T  310903 gggaacttctatggtacactcacaattttgagtgtgccggtactcttgtt 310952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 38971875 - 38971822
Alignment:
Q  216 ataagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||| ||||||| ||| |||||| ||||||||||||||||||| ||||||||||    
T  38971875 ataatggaacttctatagtacactcacaattttgagtgtaccggtactcttgtt 38971822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 39002973 - 39002920
Alignment:
Q  216 ataagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||| ||||||| ||| |||||| ||||||||||||||||||| ||||||||||    
T  39002973 ataatggaacttctatagtacactcacaattttgagtgtaccggtactcttgtt 39002920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 5982479 - 5982510
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttcttc 299  Q
    ||||||||||||||||||||||||||||||||    
T  5982479 ttgtcaatgatagaaaataattatttttcttc 5982510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 385
Target Start/End: Complemental strand, 17642136 - 17642071
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcctta 385  Q
    ||||||||| | || |||||||||| |||||| || || | ||||||||||||||||||||||||||    
T  17642136 tattaatttaatgatttggtgtaccaatacactcatat-ctttggatgtaccatagaatttgcctta 17642071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 19718693 - 19718758
Alignment:
Q  317 attattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||||| | || |||||||||  |||||| ||||||  ||||||||||||||||||||||||    
T  19718693 attattaatttaatgatttggtgtactaatacactcaaattt-ttggatgtaccatagaatttgcct 19718758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 380
Target Start/End: Complemental strand, 1043121 - 1043060
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttg 380  Q
    ||||||||| | || | ||||||||||||||| |||||  ||||| ||||||||||||||||    
T  1043121 tattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccatagaatttg 1043060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 1426327 - 1426376
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||| || |||||||||| ||||||||||||||||| | ||||||||||    
T  1426327 gggaaattctatggtacactcacaattttgagtgtactggtactcttgtt 1426376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 21835841 - 21835788
Alignment:
Q  217 taagggaacttgtatggtacacccacaa-ttttgagtgtaccgatactcttgtt 269  Q
    ||||||||||| |||||||||| ||||| |||||||||||||  ||||||||||    
T  21835841 taagggaacttctatggtacactcacaatttttgagtgtaccagtactcttgtt 21835788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 29454553 - 29454617
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || | ||||||||| ||||| |||||  ||||| |||||||||||||||||||    
T  29454553 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 29454617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 29773507 - 29773444
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || |||||||||| |||||| ||||||  |||| |||||||||||||||||||    
T  29773507 tattaatttaaggatttggtgtaccaatacactcaaattg-ttgggtgtaccatagaatttgcct 29773444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 34058122 - 34058150
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  34058122 gttgtcaatgatagaaaataattattttt 34058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Original strand, 36569942 - 36569970
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttc 296  Q
    |||||||||||||||||||||||||||||    
T  36569942 ttgtcaatgatagaaaataattatttttc 36569970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 42444562 - 42444625
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || |||||||||| |||||| ||||| | || |||||||||||||||||||||    
T  42444562 tattaatttaatgatttggtgtaccaatacactcaaat-ctttagatgtaccatagaatttgcct 42444625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 43331858 - 43331830
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  43331858 gttgtcaatgatagaaaataattattttt 43331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 44309680 - 44309652
Alignment:
Q  267 gttgtcaatgatagaaaataattattttt 295  Q
    |||||||||||||||||||||||||||||    
T  44309680 gttgtcaatgatagaaaataattattttt 44309652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Original strand, 44637213 - 44637241
Alignment:
Q  268 ttgtcaatgatagaaaataattatttttc 296  Q
    |||||||||||||||||||||||||||||    
T  44637213 ttgtcaatgatagaaaataattatttttc 44637241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 45393443 - 45393495
Alignment:
Q  217 taagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||||  |||||||||| ||||||||||| ||||| | ||||||||||    
T  45393443 taagggaactgatatggtacactcacaattttgaatgtactggtactcttgtt 45393495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1999 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1999
Description:

Target: scaffold1999; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 1118 - 1003
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  1118 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggagtaccgatacacccaaatttattagatg 1019  T
Q  367 taccatagaatttgcc 382  Q
    ||||||| ||||||||    
T  1018 taccataaaatttgcc 1003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 15495 - 15380
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    ||||||||||||||||||||||||||||| |||        |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  15495 gttgtcaatgatagaaaataattattttttttcaaaaaaataactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtg 15396  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  15395 taccatagaatttgcc 15380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 15791 - 15739
Alignment:
Q  217 taagggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  15791 taagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 15739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 8718 - 8844
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgat--------acacccaaattc 358  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||        ||||||||||||    
T  8718 gttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgatacactcaaacacccaaattc 8817  T
Q  359 attggatgtaccatagaatttgcctta 385  Q
    ||||| ||||||||||||||| |||||    
T  8818 attgggtgtaccatagaatttacctta 8844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 17786 - 17900
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||| | ||       ||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  17786 gttgtcaatgatagaaaataattatttt-catcaaaaaaacaactcatttattattaattttacgacttggtgtaccaatacacctaaatttattggatg 17884  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  17885 taccatagaatttgcc 17900  T

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Target: scaffold0005 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 291738 - 291623
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatg 366  Q
    |||||||||||||||||||||||||||||||||         | | |||||||||||||||||||| |||||||||||||||||||||||| |||| |||    
T  291738 gttgtcaatgatagaaaataattatttttcttcaaaaaaattatttatttattattaattttacgatttggtgtaccgatacacccaaatttattgaatg 291639  T
Q  367 taccatagaatttgcc 382  Q
    ||||||||||||||||    
T  291638 taccatagaatttgcc 291623  T

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Target: scaffold0301 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 383
Target Start/End: Complemental strand, 21567 - 21459
Alignment:
Q  273 aatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccat 372  Q
    |||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||    
T  21567 aatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacaccc-aatttattgggtgta-cat 21470  T
Q  373 agaatttgcct 383  Q
    |||||||||||    
T  21469 agaatttgcct 21459  T

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Target: scaffold0017 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 26974 - 27047
Alignment:
Q  307 caactgatttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttg 380  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  26974 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttg 27047  T

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Target: scaffold0493 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 1497 - 1378
Alignment:
Q  267 gttgtcaatgatagaaaataattatttttcttcnnnnnnncaactgatttattattaa--ttttacgacttggtgtaccgatacacccaaattcattgga 364  Q
    ||||||||||||||||||||||||||||||||        ||||| |||||||||| |  ||||| ||||||||||||| ||||||||||||| |||||     
T  1497 gttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattatttaatttttatgacttggtgtaccaatacacccaaatttattggg 1399  T
Q  365 tgtaccatagaatttgcctta 385  Q
    |||||||||||||||||||||    
T  1398 tgtaccatagaatttgcctta 1378  T

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Target: scaffold0493; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 1794 - 1745
Alignment:
Q  220 gggaacttgtatggtacacccacaattttgagtgtaccgatactcttgtt 269  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  1794 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtt 1745  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 16944 - 16989
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||||||| |||||  ||||| ||||||||||||||||||    
T  16944 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 16989  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 382
Target Start/End: Complemental strand, 55900 - 55855
Alignment:
Q  337 gtgtaccgatacacccaaattcattggatgtaccatagaatttgcc 382  Q
    |||||||||||||| |||||  ||||| ||||||||||||||||||    
T  55900 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 55855  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 45824 - 45760
Alignment:
Q  319 tattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgcct 383  Q
    ||||||||| | || ||| |||| |||||||| |||||   ||||||||||||||||||||||||    
T  45824 tattaatttaaagatttgatgtatcgatacactcaaatattttggatgtaccatagaatttgcct 45760  T

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