View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19448_low_19 (Length: 300)

Name: NF19448_low_19
Description: NF19448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19448_low_19
NF19448_low_19
[»] chr1 (34 HSPs)
chr1 (18-248)||(39911796-39912026)
chr1 (244-300)||(49615294-49615350)
chr1 (244-300)||(36231723-36231781)
chr1 (249-300)||(13813559-13813612)
chr1 (249-300)||(25995461-25995514)
chr1 (249-300)||(35972821-35972874)
chr1 (249-300)||(42256461-42256514)
chr1 (251-300)||(835874-835925)
chr1 (249-298)||(1100218-1100269)
chr1 (251-300)||(25130706-25130757)
chr1 (250-299)||(50035555-50035606)
chr1 (249-284)||(48561793-48561828)
chr1 (249-300)||(3919301-3919354)
chr1 (249-300)||(5959389-5959442)
chr1 (249-300)||(6829800-6829853)
chr1 (249-300)||(7371965-7372018)
chr1 (249-300)||(9011646-9011699)
chr1 (249-300)||(11097901-11097954)
chr1 (249-300)||(12999839-12999892)
chr1 (249-300)||(16658439-16658492)
chr1 (249-300)||(18610774-18610827)
chr1 (249-300)||(22674713-22674766)
chr1 (249-300)||(27352631-27352684)
chr1 (249-300)||(29489376-29489429)
chr1 (249-300)||(36669387-36669440)
chr1 (249-300)||(50226896-50226949)
chr1 (242-300)||(7078517-7078577)
chr1 (244-298)||(11038258-11038314)
chr1 (249-295)||(39669807-39669855)
chr1 (242-300)||(40612108-40612168)
chr1 (249-299)||(52714979-52715031)
chr1 (249-298)||(6396328-6396379)
chr1 (251-296)||(22171537-22171584)
chr1 (249-298)||(31427976-31428027)
[»] chr8 (31 HSPs)
chr8 (249-300)||(30927948-30928001)
chr8 (249-300)||(28156204-28156257)
chr8 (249-300)||(1065418-1065471)
chr8 (249-300)||(20288534-20288587)
chr8 (249-300)||(21075163-21075216)
chr8 (249-300)||(41273516-41273569)
chr8 (249-300)||(41293738-41293791)
chr8 (251-300)||(6656362-6656413)
chr8 (251-300)||(6736764-6736815)
chr8 (256-300)||(20896011-20896057)
chr8 (244-300)||(32674249-32674307)
chr8 (249-300)||(5742674-5742727)
chr8 (249-300)||(6004945-6004998)
chr8 (249-300)||(9314412-9314465)
chr8 (249-300)||(12045670-12045723)
chr8 (249-300)||(22836156-22836209)
chr8 (249-300)||(27300347-27300400)
chr8 (253-300)||(32185678-32185727)
chr8 (249-296)||(33817157-33817206)
chr8 (249-300)||(35937529-35937582)
chr8 (249-300)||(38504171-38504224)
chr8 (249-300)||(45101397-45101450)
chr8 (250-300)||(21648948-21649000)
chr8 (249-295)||(37568636-37568684)
chr8 (242-300)||(40380275-40380335)
chr8 (250-300)||(43186298-43186350)
chr8 (251-300)||(6746066-6746117)
chr8 (251-300)||(14228710-14228761)
chr8 (249-298)||(21649187-21649238)
chr8 (249-296)||(42543500-42543548)
chr8 (249-298)||(43873710-43873761)
[»] chr2 (34 HSPs)
chr2 (249-300)||(34144568-34144621)
chr2 (249-300)||(35171243-35171296)
chr2 (249-300)||(44484673-44484726)
chr2 (243-300)||(34373000-34373059)
chr2 (249-300)||(3196104-3196157)
chr2 (249-300)||(6328668-6328721)
chr2 (249-300)||(15283267-15283320)
chr2 (249-300)||(25094353-25094406)
chr2 (249-300)||(27307248-27307301)
chr2 (249-300)||(38246768-38246821)
chr2 (242-300)||(5954500-5954560)
chr2 (249-299)||(36909861-36909913)
chr2 (248-300)||(7502444-7502499)
chr2 (247-300)||(20974352-20974407)
chr2 (251-300)||(17999749-17999800)
chr2 (249-300)||(1889148-1889201)
chr2 (249-300)||(9384376-9384429)
chr2 (249-300)||(9695078-9695131)
chr2 (249-300)||(10687942-10687995)
chr2 (249-300)||(13553148-13553201)
chr2 (249-300)||(29168726-29168779)
chr2 (249-300)||(29893611-29893664)
chr2 (249-300)||(30339994-30340047)
chr2 (249-292)||(30487494-30487539)
chr2 (249-300)||(30856808-30856861)
chr2 (249-300)||(32688561-32688614)
chr2 (249-300)||(36383463-36383516)
chr2 (249-300)||(40721772-40721825)
chr2 (249-299)||(6365187-6365239)
chr2 (249-300)||(22888838-22888891)
chr2 (249-299)||(36435682-36435734)
chr2 (249-298)||(11728140-11728191)
chr2 (243-300)||(13466092-13466151)
chr2 (249-300)||(32944520-32944572)
[»] chr7 (32 HSPs)
chr7 (243-300)||(30864434-30864493)
chr7 (249-300)||(33050184-33050237)
chr7 (249-300)||(2347076-2347129)
chr7 (249-300)||(4971291-4971344)
chr7 (249-300)||(43079649-43079702)
chr7 (249-298)||(1838453-1838502)
chr7 (250-300)||(28596908-28596960)
chr7 (249-297)||(42118715-42118764)
chr7 (251-300)||(640395-640446)
chr7 (249-298)||(37325838-37325889)
chr7 (249-298)||(44511140-44511191)
chr7 (248-300)||(35212972-35213026)
chr7 (249-300)||(46829480-46829534)
chr7 (249-300)||(2790178-2790231)
chr7 (249-300)||(19426581-19426634)
chr7 (249-300)||(19880248-19880301)
chr7 (249-300)||(27164854-27164907)
chr7 (249-300)||(28081799-28081852)
chr7 (249-300)||(28548238-28548291)
chr7 (249-300)||(29162296-29162349)
chr7 (249-296)||(29763831-29763880)
chr7 (249-300)||(30538627-30538680)
chr7 (249-300)||(36108173-36108226)
chr7 (249-300)||(37969932-37969985)
chr7 (249-300)||(38023441-38023494)
chr7 (249-300)||(41458917-41458970)
chr7 (249-300)||(41538483-41538536)
chr7 (249-296)||(41966333-41966382)
chr7 (237-270)||(43213308-43213341)
chr7 (243-300)||(33684675-33684734)
chr7 (251-300)||(37385250-37385301)
chr7 (251-300)||(45335865-45335916)
[»] chr6 (12 HSPs)
chr6 (244-300)||(3339516-3339574)
chr6 (249-300)||(25995443-25995496)
chr6 (244-298)||(30796094-30796150)
chr6 (249-300)||(2056784-2056837)
chr6 (249-300)||(17417252-17417305)
chr6 (249-300)||(25554246-25554299)
chr6 (249-300)||(26094906-26094959)
chr6 (249-300)||(9954549-9954602)
chr6 (249-296)||(11785356-11785405)
chr6 (251-300)||(16533277-16533327)
chr6 (249-300)||(32729890-32729943)
chr6 (249-300)||(34976617-34976669)
[»] scaffold0651 (1 HSPs)
scaffold0651 (249-300)||(4863-4916)
[»] chr5 (26 HSPs)
chr5 (249-300)||(9594479-9594532)
chr5 (249-300)||(9599745-9599798)
chr5 (249-300)||(30574394-30574447)
chr5 (249-297)||(12512804-12512854)
chr5 (245-300)||(31025022-31025079)
chr5 (249-300)||(39788723-39788776)
chr5 (249-291)||(28501593-28501637)
chr5 (249-298)||(14914373-14914424)
chr5 (259-300)||(28501628-28501671)
chr5 (249-298)||(38500944-38500995)
chr5 (249-300)||(3263525-3263578)
chr5 (249-300)||(3634495-3634548)
chr5 (249-300)||(12661964-12662017)
chr5 (249-300)||(20985546-20985599)
chr5 (249-300)||(27271068-27271121)
chr5 (249-300)||(28903992-28904045)
chr5 (249-300)||(28940387-28940440)
chr5 (249-300)||(29765831-29765884)
chr5 (249-300)||(32634709-32634762)
chr5 (249-300)||(34381013-34381066)
chr5 (249-300)||(36581482-36581535)
chr5 (249-300)||(39595273-39595326)
chr5 (249-299)||(2050928-2050980)
chr5 (249-298)||(3031835-3031886)
chr5 (244-284)||(25842240-25842280)
chr5 (249-299)||(33243757-33243809)
[»] chr4 (34 HSPs)
chr4 (249-300)||(5208344-5208397)
chr4 (249-300)||(24235321-24235374)
chr4 (249-300)||(31318754-31318807)
chr4 (244-300)||(3222985-3223043)
chr4 (249-300)||(1796367-1796420)
chr4 (249-300)||(1987730-1987783)
chr4 (249-300)||(3475870-3475923)
chr4 (249-300)||(4577558-4577611)
chr4 (249-300)||(7037501-7037554)
chr4 (249-300)||(9032781-9032834)
chr4 (249-300)||(27001426-27001479)
chr4 (249-300)||(44368219-44368272)
chr4 (249-300)||(51377310-51377363)
chr4 (249-300)||(53662445-53662498)
chr4 (249-300)||(55268018-55268071)
chr4 (249-298)||(43168733-43168784)
chr4 (252-300)||(33484125-33484175)
chr4 (249-300)||(47288083-47288137)
chr4 (249-300)||(6093624-6093677)
chr4 (249-300)||(8026770-8026823)
chr4 (249-300)||(8680942-8680995)
chr4 (249-300)||(31221414-31221467)
chr4 (249-300)||(31240649-31240702)
chr4 (249-300)||(34259816-34259869)
chr4 (249-300)||(44165910-44165963)
chr4 (249-300)||(52669626-52669679)
chr4 (249-300)||(54803345-54803398)
chr4 (244-300)||(55609182-55609240)
chr4 (249-299)||(4896518-4896570)
chr4 (249-299)||(13267496-13267548)
chr4 (249-300)||(13389469-13389522)
chr4 (249-298)||(29863552-29863603)
chr4 (249-300)||(49194885-49194937)
chr4 (251-300)||(52487286-52487337)
[»] chr3 (45 HSPs)
chr3 (249-300)||(11327109-11327162)
chr3 (249-300)||(32931935-32931988)
chr3 (249-300)||(36818957-36819010)
chr3 (243-300)||(30400173-30400232)
chr3 (243-300)||(35376568-35376627)
chr3 (244-300)||(8254023-8254081)
chr3 (244-300)||(53932408-53932466)
chr3 (249-300)||(108432-108485)
chr3 (249-300)||(12792639-12792692)
chr3 (249-300)||(20215949-20216002)
chr3 (249-300)||(20714244-20714297)
chr3 (249-300)||(47141617-47141670)
chr3 (249-300)||(49761203-49761256)
chr3 (249-300)||(50879596-50879649)
chr3 (249-299)||(5398919-5398971)
chr3 (249-294)||(43441673-43441720)
chr3 (249-298)||(50280106-50280157)
chr3 (249-300)||(48405411-48405465)
chr3 (249-300)||(462418-462471)
chr3 (249-300)||(1834507-1834560)
chr3 (249-300)||(1901943-1901996)
chr3 (249-300)||(1911389-1911442)
chr3 (249-300)||(2280178-2280231)
chr3 (249-300)||(2482691-2482744)
chr3 (249-300)||(3069592-3069644)
chr3 (249-300)||(9557939-9557992)
chr3 (249-300)||(16295465-16295518)
chr3 (244-300)||(16479628-16479686)
chr3 (249-300)||(25559705-25559758)
chr3 (249-300)||(31176457-31176510)
chr3 (249-300)||(38944158-38944211)
chr3 (249-300)||(42643236-42643289)
chr3 (249-300)||(43409379-43409432)
chr3 (249-300)||(46344415-46344468)
chr3 (249-300)||(47056543-47056596)
chr3 (243-298)||(47849667-47849724)
chr3 (249-300)||(50025715-50025768)
chr3 (249-300)||(52454111-52454164)
chr3 (250-300)||(38471644-38471696)
chr3 (244-294)||(44689788-44689840)
chr3 (249-300)||(3957831-3957883)
chr3 (249-298)||(9159055-9159106)
chr3 (243-300)||(39604263-39604322)
chr3 (249-298)||(52100262-52100313)
chr3 (249-298)||(54233487-54233538)
[»] scaffold0011 (2 HSPs)
scaffold0011 (249-300)||(18596-18649)
scaffold0011 (243-296)||(219685-219740)
[»] scaffold0514 (1 HSPs)
scaffold0514 (244-300)||(1513-1571)
[»] scaffold0026 (1 HSPs)
scaffold0026 (249-299)||(113626-113678)
[»] scaffold0018 (1 HSPs)
scaffold0018 (243-300)||(35997-36056)


Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 39912026 - 39911796
Alignment:
Q  18 ttaatgagtttgatataactgttgtggaaacaaatatctatctcattgtcagaaattagaatgaaaacagtcacataggattggacggctatgtatgttg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39912026 ttaatgagtttgatataactgttgtggaaacaaatatctatctcattgtcagaaattagaatgaaaacagtcacataggattggacggctatgtatgttg 39911927  T
Q  118 tcatcatttccatttacccccactcataattcattcatccataaaccagtcgtccattaccattttgatttttaagagcactgttgttttacccaacata 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39911926 tcatcatttccatttacccccactcataattcattcatctataaaccagtcgtccattaccattttgatttttgagagcactgttgttttacccaacata 39911827  T
Q  218 ataagagatcacaattttcaattgtttaaat 248  Q
    |||||||||||||||||||||||||||||||    
T  39911826 ataagagatcacaattttcaattgtttaaat 39911796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 49615350 - 49615294
Alignment:
Q  244 taaatagaaatgatatttgtacaaccattgtgacaatttttgtacaactttctctct 300  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  49615350 taaagagaaatgatatttgtacaaccattggtacaatttttgtacaaccttctctct 49615294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 36231781 - 36231723
Alignment:
Q  244 taaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||||||  |||||||||| |||  ||||||||||||||    
T  36231781 taaatagaaatgatatttgtacaaccattttgtgacaatatttagacaactttctctct 36231723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 13813559 - 13813612
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| || |||||||||||||||||    
T  13813559 agaaatgatatttgtacaaccaatttgtgacaacttctgtacaactttctctct 13813612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 25995461 - 25995514
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||    
T  25995461 agaaatgatatttgtacaatcaatttgtgacaagttttgtacaactttctctct 25995514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 35972874 - 35972821
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||| ||||||||  ||||||| ||||||||||||||||||||    
T  35972874 agaaatgatatttgttcaaccattttgtgacaacttttgtacaactttctctct 35972821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 42256461 - 42256514
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||| ||||||||||||||||    
T  42256461 agaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctct 42256514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 835874 - 835925
Alignment:
Q  251 aaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    ||||||||||||||||| |||| ||  |||||||||||||||||||||||||    
T  835874 aaatgatatttgtacaatcattttgttacaatttttgtacaactttctctct 835925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 1100218 - 1100269
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctct 298  Q
    |||||||||||||||||||||||| |   |||||||||||||||||||||||    
T  1100218 agaaatgatatttgtacaaccatttttgtacaatttttgtacaactttctct 1100269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 25130706 - 25130757
Alignment:
Q  251 aaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||| ||  ||||||||| ||||||||||||||||||||    
T  25130706 aaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctct 25130757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 50035606 - 50035555
Alignment:
Q  250 gaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctc 299  Q
    |||||||||||||||||||||  ||||||||| |||| ||||||||||||||    
T  50035606 gaaatgatatttgtacaaccattttgtgacaacttttatacaactttctctc 50035555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 48561828 - 48561793
Alignment:
Q  249 agaaatgatatttgtacaaccattgtgacaattttt 284  Q
    ||||| ||||||||||||||||||||||||||||||    
T  48561828 agaaaagatatttgtacaaccattgtgacaattttt 48561793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 3919301 - 3919354
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||| | |||||||| ||||||||||||||    
T  3919301 agaaatgatatttgtacaaccattttgttataatttttggacaactttctctct 3919354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 5959389 - 5959442
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||| |||||||  ||||||| ||||| ||||||||||||||    
T  5959389 agaaatgatatttgtataaccattatgtgacaacttttggacaactttctctct 5959442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 6829853 - 6829800
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||||| |||||    
T  6829853 agaaatgatatttgtacaactaatttgtgacaacttttgtacaactttatctct 6829800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 7372018 - 7371965
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| |  || ||||||||||||||||| |||||||||    
T  7372018 agaaatgatatttgtacaactaatttatgacaatttttgtacaattttctctct 7371965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 9011646 - 9011699
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| |||  |||||||||||||||    
T  9011646 agaaatgatatttgtacaaccattttgtgacaactttgatacaactttctctct 9011699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 11097954 - 11097901
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||| |||||  ||||||| ||||| ||||||||||||||    
T  11097954 agaaatgatatttgtacatccattttgtgacaacttttgaacaactttctctct 11097901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 12999892 - 12999839
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  || | |||| ||||||||||||||||||||    
T  12999892 agaaatgatatttgtacaaccattttctaacaacttttgtacaactttctctct 12999839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 16658439 - 16658492
Alignment:
Q  249 agaaatgatatttgtacaac--cattgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||  ||||||||||| ||||  ||||||||||||||    
T  16658439 agaaatgatatttgtacaaccacattgtgacaacttttagacaactttctctct 16658492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 18610774 - 18610827
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| |||  ||||||| |||| |||||||||||||||    
T  18610774 agaaatgatatttgtacaactattttgtgacaacttttttacaactttctctct 18610827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 22674713 - 22674766
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| ||| |   |||||||||||||||||||||||||    
T  22674713 agaaatgatatttgtacaactatttttgtacaatttttgtacaactttctctct 22674766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 27352631 - 27352684
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||| || ||||| ||||||||||||||    
T  27352631 agaaatgatatttgtacaaccattttgtgataacttttggacaactttctctct 27352684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 29489429 - 29489376
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||| || ||| ||||||||||||||||    
T  29489429 agaaatgatatttgtacaaccattttgtgataactttggtacaactttctctct 29489376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 36669440 - 36669387
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  |||||| ||||||||||||||||| |||||    
T  36669440 agaaatgatatttgtacaatcaatttgtgataatttttgtacaactttttctct 36669387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 50226949 - 50226896
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  50226949 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctct 50226896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 7078577 - 7078517
Alignment:
Q  242 tttaaatagaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    |||||| |||||||||||||||||| | |||  ||||||| ||||| ||||||||||||||    
T  7078577 tttaaagagaaatgatatttgtacatctattttgtgacaacttttgaacaactttctctct 7078517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 298
Target Start/End: Original strand, 11038258 - 11038314
Alignment:
Q  244 taaatagaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctct 298  Q
    |||| ||||||||||||| |||||||||| ||  | |||||||||||||||||||||    
T  11038258 taaagagaaatgatatttatacaaccattttggtataatttttgtacaactttctct 11038314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 39669807 - 39669855
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttc 295  Q
    ||||||||||||||||||||||  ||||||||||||||  |||||||||    
T  39669807 agaaatgatatttgtacaaccattttgtgacaattttttgacaactttc 39669855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 40612108 - 40612168
Alignment:
Q  242 tttaaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||| ||||||||||||||||||||||  ||||||||| || |  ||||||||||||||    
T  40612108 tttaaagagaaatgatatttgtacaaccattttgtgacaacttctccacaactttctctct 40612168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 52714979 - 52715031
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctc 299  Q
    ||||||||||||||||||| ||||  ||||||| |||| ||||||||||||||    
T  52714979 agaaatgatatttgtacaatcattttgtgacaacttttttacaactttctctc 52715031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 6396328 - 6396379
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctct 298  Q
    |||||||||||| ||||||||||| ||  |||| ||||||||||||||||||    
T  6396328 agaaatgatattggtacaaccattttggtacaacttttgtacaactttctct 6396379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 22171584 - 22171537
Alignment:
Q  251 aaatgatatttgtacaacca--ttgtgacaatttttgtacaactttct 296  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||||    
T  22171584 aaatgatatttgtacagtcaatttgtgacaatttttgtacaactttct 22171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 31428027 - 31427976
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctct 298  Q
    ||||||||||||||||||||||  |||||||||||| |  ||||||||||||    
T  31428027 agaaatgatatttgtacaaccactttgtgacaatttcttgacaactttctct 31427976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 30928001 - 30927948
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  30928001 agaaatgatatttgtacaaccaatttgtgacaatttttgtacaactttctctct 30927948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 28156204 - 28156257
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  28156204 agaaatgatatttgtacaaccattttggtacaatttttgtacaactttctctct 28156257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 1065418 - 1065471
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| || |||||||||||||||||    
T  1065418 agaaatgatatttgtacaaccaatttgtgacaacttctgtacaactttctctct 1065471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 20288534 - 20288587
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||||||| ||||||||||    
T  20288534 agaaatgatatttgtacaaccaatttgtgacaacttttgtacatctttctctct 20288587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 21075163 - 21075216
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||||||| ||||||||||    
T  21075163 agaaatgatatttgtacaaccaatttgtgacaacttttgtacatctttctctct 21075216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 41273516 - 41273569
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||    
T  41273516 agaaatgatatttgtacaaacaatttgtgacaacttttgtacaactttctctct 41273569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 41293791 - 41293738
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||| ||||||||  ||||||||| ||||||||||||||||||||    
T  41293791 agaaatgatatttttacaaccaatttgtgacaacttttgtacaactttctctct 41293738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 6656413 - 6656362
Alignment:
Q  251 aaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  6656413 aaatgatatttgtagaaccaatttgtgacaacttttgtacaactttctctct 6656362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 6736815 - 6736764
Alignment:
Q  251 aaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  6736815 aaatgatatttgtagaaccaatttgtgacaacttttgtacaactttctctct 6736764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 20896057 - 20896011
Alignment:
Q  256 atatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||    
T  20896057 atatttgtacaaccattttgtgacaattttggtacaactttctctct 20896011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 32674307 - 32674249
Alignment:
Q  244 taaatagaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||| |||||||||||||||||||||||| ||  | || ||||||||||||||||||||    
T  32674307 taaagagaaatgatatttgtacaaccattttggtataacttttgtacaactttctctct 32674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 5742727 - 5742674
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  |||| |||||||||||||| |||||    
T  5742727 agaaatgatatttgtacaaccattttggtacaacttttgtacaactttatctct 5742674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 6004945 - 6004998
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| |  ||||||||||||||  ||||||||||||||    
T  6004945 agaaatgatatttgtacaactactttgtgacaatttttagacaactttctctct 6004998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 9314412 - 9314465
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||| ||||| |  ||||||||||||||||| ||||||||    
T  9314412 agaaatgatatttgtacatccattttatgacaatttttgtacaaccttctctct 9314465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 12045723 - 12045670
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||||  ||||||| ||||  ||||||||||||||    
T  12045723 agaaatgatatttgtacaaccatttagtgacaacttttagacaactttctctct 12045670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 22836209 - 22836156
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| |   |||| ||||||||||||||||||||    
T  22836209 agaaatgatatttgtacaaccattttcatacaaattttgtacaactttctctct 22836156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 27300347 - 27300400
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| |   |||| ||||||||||||||||||||    
T  27300347 agaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctctct 27300400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 32185727 - 32185678
Alignment:
Q  253 atgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||| ||||||||||  ||||||||| ||||||||||||||||||||    
T  32185727 atgatatctgtacaaccaatttgtgacaacttttgtacaactttctctct 32185678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 33817157 - 33817206
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttct 296  Q
    ||||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  33817157 agaaatgatatttgtacaatcaatttgtaacaatttttgtacaactttct 33817206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 35937582 - 35937529
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||| |||| ||||| ||||||||||||||    
T  35937582 agaaatgatatttgtacaaccattttgtaacaacttttggacaactttctctct 35937529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 38504171 - 38504224
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  |||||||||  ||||||||||||||    
T  38504171 agaaatgatatttgtacaaccattttgctacaattttttgacaactttctctct 38504224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 45101397 - 45101450
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  45101397 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctct 45101450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 21649000 - 21648948
Alignment:
Q  250 gaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  21649000 gaaatgatatttgtacaaccaatttgtgacaactttttaacaactttctctct 21648948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 37568684 - 37568636
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttc 295  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||||||    
T  37568684 agaaatgatatttgtacaaacattttgtgacaatttttatacaactttc 37568636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 40380275 - 40380335
Alignment:
Q  242 tttaaatagaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    |||||| |||||||||||||||||| | ||| |  ||||| ||||||||||||||||||||    
T  40380275 tttaaagagaaatgatatttgtacatctattttatgacaacttttgtacaactttctctct 40380335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 43186298 - 43186350
Alignment:
Q  250 gaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||  |||  |||| |||||||||||||||||||||||    
T  43186298 gaaatgatatttgtacaattattttgtgataatttttgtacaactttctctct 43186350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 6746117 - 6746066
Alignment:
Q  251 aaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||| ||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  6746117 aaataatatttgtagaaccaatttgtgacaacttttgtacaactttctctct 6746066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 14228710 - 14228761
Alignment:
Q  251 aaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||| |||  |||| || ||||||||||||||||||||    
T  14228710 aaatgatatttgtacaactattttgtgataacttttgtacaactttctctct 14228761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 21649238 - 21649187
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctct 298  Q
    |||||||||||||||||||||||| |   |||| ||||||||||||||||||    
T  21649238 agaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctct 21649187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 42543548 - 42543500
Alignment:
Q  249 agaaatgatatttgtacaacca-ttgtgacaatttttgtacaactttct 296  Q
    |||||||||||||||||||||| |||||| || |||| |||||||||||    
T  42543548 agaaatgatatttgtacaaccacttgtgataacttttttacaactttct 42543500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 43873761 - 43873710
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctct 298  Q
    ||||||||||||||||||||||  ||||||||||||||  |||||| |||||    
T  43873761 agaaatgatatttgtacaaccattttgtgacaattttttgacaactctctct 43873710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 34144621 - 34144568
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  34144621 agaaatgatatttgtacaaccaatttgtgacaatttttgtacaactttctctct 34144568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 35171296 - 35171243
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  35171296 agaaatgatatttgtacaaccattttgtgacaattttggtacaactttctctct 35171243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 44484726 - 44484673
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  44484726 agaaatgatatttgtacaaccattttgtaacaatttttgtacaactttctctct 44484673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 34373000 - 34373059
Alignment:
Q  243 ttaaatagaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||| ||||||||||||||||||||||||| ||  | |||||||||||||||||||||||    
T  34373000 ttaattagaaatgatatttgtacaaccattttggtataatttttgtacaactttctctct 34373059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 3196157 - 3196104
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||    
T  3196157 agaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctct 3196104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 6328668 - 6328721
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  | |||||||||||||||||||||||    
T  6328668 agaaatgatatttgtacaaccattttggtataatttttgtacaactttctctct 6328721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 15283320 - 15283267
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  15283320 agaaatgatatttgtacaaccactttgtgacaatttttagacaactttctctct 15283267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 25094353 - 25094406
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||| ||||||| ||  |||||||||||||||||||||||||    
T  25094353 agaaatgatatttgtataaccattttggtacaatttttgtacaactttctctct 25094406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 27307301 - 27307248
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||    
T  27307301 agaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctct 27307248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 38246821 - 38246768
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||    
T  38246821 agaaatgatatttgtacaatcaatttgtgacaatttttgtagaactttctctct 38246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 5954560 - 5954500
Alignment:
Q  242 tttaaatagaaatgatatttgtacaaccat--tgtgacaatttttgtacaactttctctct 300  Q
    |||||| |||||||||||||||||||||||  ||||| || ||||| ||||||||||||||    
T  5954560 tttaaagagaaatgatatttgtacaaccattatgtgataacttttggacaactttctctct 5954500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 36909913 - 36909861
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctc 299  Q
    ||||||||||||||||||||||  ||||||||| ||||| |||||||||||||    
T  36909913 agaaatgatatttgtacaaccattttgtgacaacttttggacaactttctctc 36909861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 7502499 - 7502444
Alignment:
Q  248 tagaaatgatatttgtacaacca--ttgtgacaatttttgt-acaactttctctct 300  Q
    |||||||||||||||||||||||  || ||||||||||||| ||||||||||||||    
T  7502499 tagaaatgatatttgtacaaccattttttgacaatttttgtgacaactttctctct 7502444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 20974352 - 20974407
Alignment:
Q  247 atagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||| |||||| |  ||||||||| ||||||||||||||||||||    
T  20974352 atagaaatgatatttttacaactaatttgtgacaacttttgtacaactttctctct 20974407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 17999749 - 17999800
Alignment:
Q  251 aaatgatatttgtacaacca-ttgtg-acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  17999749 aaatgatatttgtacaaccatttgtgtacaacttttgtacaactttctctct 17999800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 1889148 - 1889201
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  || |||||||||||  ||||||||||||||    
T  1889148 agaaatgatatttgtacaaccactttctgacaattttttgacaactttctctct 1889201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 9384376 - 9384429
Alignment:
Q  249 agaaatgatatttgtacaaccattgtgaca--atttttgtacaactttctctct 300  Q
    |||||||||||||||||||| ||| | |||  ||||||||||||||||||||||    
T  9384376 agaaatgatatttgtacaactatttttacataatttttgtacaactttctctct 9384429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 9695131 - 9695078
Alignment:
Q  249 agaaatgatatttgtacaaccat--tgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||  || || |||||||| ||||||||||||||    
T  9695131 agaaatgatatttgtacaaccattatgagataatttttggacaactttctctct 9695078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 10687942 - 10687995
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| |||| |||||||||||||||    
T  10687942 agaaatgatatttgtacaaacaatttgtgacaacttttatacaactttctctct 10687995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 13553148 - 13553201
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||| |||||||| |||| |||||||||    
T  13553148 agaaatgatatttgtacaaccactttgtgataatttttggacaattttctctct 13553201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 29168726 - 29168779
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  || |||||| ||||| ||||||||||||||    
T  29168726 agaaatgatatttgtacaaccattttttgacaacttttgcacaactttctctct 29168779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 29893611 - 29893664
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| |  |||||| || ||||||||||||||||||||    
T  29893611 agaaatgatatttgtacaactaatttgtgataacttttgtacaactttctctct 29893664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 30339994 - 30340047
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| |   |||| ||||||||||||||||||||    
T  30339994 agaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctctct 30340047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 30487539 - 30487494
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaact 292  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  30487539 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaact 30487494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 30856808 - 30856861
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  30856808 agaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctct 30856861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 32688614 - 32688561
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  || |||||||||||  ||||||||||||||    
T  32688614 agaaatgatatttgtacaaccactttctgacaattttttgacaactttctctct 32688561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 36383463 - 36383516
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||  |||  ||||||| ||||||||||||||||||||    
T  36383463 agaaatgatatttgtacaaagattttgtgacaacttttgtacaactttctctct 36383516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 40721772 - 40721825
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||| ||||| ||  |||| ||||||||||||||||||||    
T  40721772 agaaatgatatttgtacagccattttggtacaacttttgtacaactttctctct 40721825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 6365187 - 6365239
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctc 299  Q
    ||||||||||||||||||||||  ||||||||||||||  |||| ||||||||    
T  6365187 agaaatgatatttgtacaaccactttgtgacaattttttgacaattttctctc 6365239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 22888891 - 22888838
Alignment:
Q  249 agaaatgatatttgtacaacca-ttgtgacaatttttgt-acaactttctctct 300  Q
    |||||||||||||| ||||||| || ||||||||||||| ||||||||||||||    
T  22888891 agaaatgatatttgaacaaccatttttgacaatttttgtgacaactttctctct 22888838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 36435682 - 36435734
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctc 299  Q
    ||||||||||||||||||||||  ||||||||| ||||  |||||||||||||    
T  36435682 agaaatgatatttgtacaaccactttgtgacaactttttaacaactttctctc 36435734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 11728191 - 11728140
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctct 298  Q
    ||||||||| |||||||||||||| ||  |||| ||||||||||||||||||    
T  11728191 agaaatgatgtttgtacaaccattttggtacaacttttgtacaactttctct 11728140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 13466151 - 13466092
Alignment:
Q  243 ttaaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||| ||||||||||||||||||||||  || | |||||||||  ||||||||||||||    
T  13466151 ttaaagagaaatgatatttgtacaaccaatttctaacaattttttaacaactttctctct 13466092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 32944572 - 32944520
Alignment:
Q  249 agaaatgatatttgtacaaccattgtgacaatttttgt-acaactttctctct 300  Q
    |||||||||||||| ||||||| ||||| || |||||| ||||||||||||||    
T  32944572 agaaatgatatttgaacaaccactgtgataacttttgtgacaactttctctct 32944520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 30864493 - 30864434
Alignment:
Q  243 ttaaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||| ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  30864493 ttaaagagaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctct 30864434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 33050184 - 33050237
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  33050184 agaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctct 33050237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 2347129 - 2347076
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||| ||||||||||||||||    
T  2347129 agaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctct 2347076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 4971291 - 4971344
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| |||| |||||||||||||||    
T  4971291 agaaatgatatttgtacaaccattttgtgacaacttttatacaactttctctct 4971344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 43079702 - 43079649
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||| |||||||| ||||||||||||||    
T  43079702 agaaatgatatttgtacaaccactttgtgataatttttggacaactttctctct 43079649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 1838502 - 1838453
Alignment:
Q  249 agaaatgatatttgtacaaccattgtgacaatttttgtacaactttctct 298  Q
    ||||||||||||||||||||| || |||||| ||||| ||||||||||||    
T  1838502 agaaatgatatttgtacaacccttttgacaacttttgcacaactttctct 1838453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 28596908 - 28596960
Alignment:
Q  250 gaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||  ||||||||| |||| |||||||||||||||    
T  28596908 gaaatgatatttgtacaaccactttgtgacaacttttttacaactttctctct 28596960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 42118764 - 42118715
Alignment:
Q  249 agaaatgatatttgtacaacca-ttgtgacaatttttgtacaactttctc 297  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  42118764 agaaatgatatttgtacaaccatttgtgacaatttttggacaactctctc 42118715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 640395 - 640446
Alignment:
Q  251 aaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||| |   |||||||||||||||||||||||||    
T  640395 aaatgatatttgtacaaccatttttgtacaatttttgtacaactttctctct 640446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 37325889 - 37325838
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctct 298  Q
    ||||||||||||||||||||||  ||||||||| |||||||||| |||||||    
T  37325889 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttctct 37325838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 44511140 - 44511191
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctct 298  Q
    |||||||||||| |||||||||||  ||||||| ||||||||||||||||||    
T  44511140 agaaatgatattcgtacaaccattttgtgacaacttttgtacaactttctct 44511191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 35213026 - 35212972
Alignment:
Q  248 tagaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||  ||| ||  |||||||||||||||||||||||||    
T  35213026 tagaaatgatatttgtacaattattttgctacaatttttgtacaactttctctct 35212972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 46829480 - 46829534
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgt-acaactttctctct 300  Q
    ||||||||||||||||||||||  |||| ||||||||||| ||||||||||||||    
T  46829480 agaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttctctct 46829534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 2790178 - 2790231
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||| |||||||||  ||||||||||||||    
T  2790178 agaaatgatatttgtacaaccactttgtaacaattttttgacaactttctctct 2790231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 19426581 - 19426634
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  19426581 agaaatgatatttgtacaaccattttgtgacaactttttgacaactttctctct 19426634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 19880301 - 19880248
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||| ||||||||||||  ||||||||| |||||||||||||| |||||    
T  19880301 agaaatgatgtttgtacaaccaatttgtgacaacttttgtacaactttatctct 19880248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 27164907 - 27164854
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| ||||||| ||||||||||||    
T  27164907 agaaatgatatttgtacaatcaatttgtgacaacttttgtataactttctctct 27164854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 28081852 - 28081799
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||| | ||||||| |||||||||||||||    
T  28081852 agaaatgatatttgtacaaccattttgtaataatttttttacaactttctctct 28081799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 28548291 - 28548238
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| ||| ||  |||| ||||||||||||||||||||    
T  28548291 agaaatgatatttgtacaactattttggtacaacttttgtacaactttctctct 28548238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 29162349 - 29162296
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| ||||||| ||||||||||||    
T  29162349 agaaatgatatttgtacaatcaatttgtgacaacttttgtataactttctctct 29162296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 29763831 - 29763880
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttct 296  Q
    ||||||||||||||||||||||  |||||| || ||||||||||||||||    
T  29763831 agaaatgatatttgtacaaccattttgtgataacttttgtacaactttct 29763880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 30538627 - 30538680
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| ||| ||  |||| ||||||||||||||||||||    
T  30538627 agaaatgatatttgtacaacaattttggtacaacttttgtacaactttctctct 30538680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 36108173 - 36108226
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  ||||||||| || ||||||||||||    
T  36108173 agaaatgatatttgtacaaccattttgatacaatttttttataactttctctct 36108226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 37969932 - 37969985
Alignment:
Q  249 agaaatgatatttgtacaaccattgtga--caatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| ||| |||  ||| ||||||||||||||||||||    
T  37969932 agaaatgatatttgtacaactattttgatacaacttttgtacaactttctctct 37969985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 38023494 - 38023441
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||| |||||||  ||||||||||||||    
T  38023494 agaaatgatatttgtacaaccactttgtgataatttttagacaactttctctct 38023441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 41458970 - 41458917
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||| ||||||||||||||||| |   |||||||||||||||||||||||||    
T  41458970 agaaataatatttgtacaaccattttagtacaatttttgtacaactttctctct 41458917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 41538483 - 41538536
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| |   |||||||||||||||| ||||||||    
T  41538483 agaaatgatatttgtacaaccatttttgtacaatttttgtacaaccttctctct 41538536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 41966333 - 41966382
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttct 296  Q
    ||||||||||||||||||||||  ||||||||||||||  ||||||||||    
T  41966333 agaaatgatatttgtacaaccactttgtgacaattttttgacaactttct 41966382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 270
Target Start/End: Original strand, 43213308 - 43213341
Alignment:
Q  237 aattgtttaaatagaaatgatatttgtacaacca 270  Q
    ||||||||||| ||||||||||||||||||||||    
T  43213308 aattgtttaaagagaaatgatatttgtacaacca 43213341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 33684675 - 33684734
Alignment:
Q  243 ttaaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||| ||||||||||||||||||||||  || | |||| |||| |||||||||||||||    
T  33684675 ttaaagagaaatgatatttgtacaaccactttctcacaacttttttacaactttctctct 33684734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 37385301 - 37385250
Alignment:
Q  251 aaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||| ||| |  ||||| ||||||||||||||||||||    
T  37385301 aaatgatatttgtacaactattttttgacaacttttgtacaactttctctct 37385250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 45335865 - 45335916
Alignment:
Q  251 aaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||| |   |||| ||||||||||||||||||||    
T  45335865 aaatgatatttgtacaaccatttttgtacaacttttgtacaactttctctct 45335916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 3339574 - 3339516
Alignment:
Q  244 taaatagaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    |||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  3339574 taaagagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctct 3339516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 25995443 - 25995496
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  25995443 agaaatgatatttgtacaaccattttgtggcaatttttgtacaactttctctct 25995496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 30796150 - 30796094
Alignment:
Q  244 taaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctct 298  Q
    |||| ||||||||||||||||||||||  |||||||||||||| |||||||||||||    
T  30796150 taaagagaaatgatatttgtacaaccactttgtgacaatttttttacaactttctct 30796094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 2056784 - 2056837
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| |||||||| |||||||||||    
T  2056784 agaaatgatatttgtacaaccaatttgtgacaacttttgtactactttctctct 2056837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 17417305 - 17417252
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||    
T  17417305 agaaatgatatttgtacaatcattatgtgacaatttttggacaactttctctct 17417252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 25554246 - 25554299
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  25554246 agaaatgatatttgtacaaccattttgtggcaatttttttacaactttctctct 25554299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 26094906 - 26094959
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||||| |||||    
T  26094906 agaaatgatatttgtacaaccattttgtggcaatttttgtacaactttatctct 26094959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 9954549 - 9954602
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  9954549 agaaatgatatttgtacaaccaatttgtgacaactttttgacaactttctctct 9954602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 11785356 - 11785405
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttct 296  Q
    ||||||||||||||||||||||  ||||||||||||||  ||||||||||    
T  11785356 agaaatgatatttgtacaaccattttgtgacaattttttgacaactttct 11785405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 16533327 - 16533277
Alignment:
Q  251 aaatgatatttgtacaacca-ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| ||||||||||||||  |||||||| |||||    
T  16533327 aaatgatatttgtacaaccatttgtgacaatttttagacaactttatctct 16533277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 32729890 - 32729943
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  || |||||| |||| |||||||||||||||    
T  32729890 agaaatgatatttgtacaaccattttctgacaacttttatacaactttctctct 32729943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 34976617 - 34976669
Alignment:
Q  249 agaaatgatatttgtacaaccattgtgacaa-tttttgtacaactttctctct 300  Q
    |||||||||||||||||||||| | ||  || |||||||||||||||||||||    
T  34976617 agaaatgatatttgtacaaccaatttggtaaatttttgtacaactttctctct 34976669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 4916 - 4863
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  4916 agaaatgatatttgtacaaccattttggtacaatttttgtacaactttctctct 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 9594479 - 9594532
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  9594479 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctct 9594532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 9599798 - 9599745
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  9599798 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctct 9599745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 30574447 - 30574394
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  30574447 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctct 30574394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 12512804 - 12512854
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctc 297  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  12512804 agaaatgatatttgtgcaaccaatttgtgacaatttttgtacaactttctc 12512854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 31025079 - 31025022
Alignment:
Q  245 aaatagaaatgatatttgtacaac--cattgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||||  |||| |||||||||||  ||||||||||||||    
T  31025079 aaatagaaatgatatttgtacaaccacattatgacaattttttaacaactttctctct 31025022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 39788776 - 39788723
Alignment:
Q  249 agaaatgatatttgtacaaccat--tgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||  |||||||| ||||| ||||||||||||||    
T  39788776 agaaatgatatttgtacaaccattatgtgacaacttttggacaactttctctct 39788723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 28501593 - 28501637
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaac 291  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  28501593 agaaatgatatttgtacaaccattttgtgacaatttttgtacaac 28501637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 14914373 - 14914424
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctct 298  Q
    ||||||||||||||||||||||  ||||||||| ||||| ||||||||||||    
T  14914373 agaaatgatatttgtacaaccattttgtgacaacttttggacaactttctct 14914424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 28501628 - 28501671
Alignment:
Q  259 tttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  28501628 tttgtacaaccattttgtgacaatttttgtacaactttctctct 28501671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 38500944 - 38500995
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctct 298  Q
    ||||||||||||||||||||||  ||||||||||||||  ||||||||||||    
T  38500944 agaaatgatatttgtacaaccattttgtgacaattttttgacaactttctct 38500995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 3263578 - 3263525
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| |||||||||| ||| |||||    
T  3263578 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttttctct 3263525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 3634495 - 3634548
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||| ||||||| |||||||  |||||||||||||| |||||||||||||||    
T  3634495 agaaattatatttgcacaaccactttgtgacaatttttttacaactttctctct 3634548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 12662017 - 12661964
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||| |||  ||||||||||||||  ||||||||||||||    
T  12662017 agaaatgatatttgtacatccactttgtgacaattttttgacaactttctctct 12661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 20985599 - 20985546
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| |   | |||||||||||||||||||||||    
T  20985599 agaaatgatatttgtacaaccatttttgtataatttttgtacaactttctctct 20985546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 27271121 - 27271068
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||| |||||  || ||||||||||||||||| |||||||||    
T  27271121 agaaatgatatttgtaaaaccaatttatgacaatttttgtacaattttctctct 27271068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 28903992 - 28904045
Alignment:
Q  249 agaaatgatatttgtacaac--cattgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||  ||||||||||| ||||  ||||||||||||||    
T  28903992 agaaatgatatttgtacaaccacattgtgacaacttttagacaactttctctct 28904045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 28940387 - 28940440
Alignment:
Q  249 agaaatgatatttgtacaac--cattgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||  ||||||||||| ||||  ||||||||||||||    
T  28940387 agaaatgatatttgtacaaccacattgtgacaacttttagacaactttctctct 28940440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 29765831 - 29765884
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| |   |||| ||||||||||||||||||||    
T  29765831 agaaatgatatttgtacaaccattttagtacaacttttgtacaactttctctct 29765884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 32634709 - 32634762
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| || |  ||||||| ||||||||||||||||||||    
T  32634709 agaaatgatatttgtacaatcaatctgtgacaacttttgtacaactttctctct 32634762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 34381013 - 34381066
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  34381013 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctct 34381066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 36581535 - 36581482
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||| |||||||  ||||||||||||||    
T  36581535 agaaatgatatttgtacaaccactttgtgataatttttagacaactttctctct 36581482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 39595273 - 39595326
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  39595273 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctct 39595326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 2050928 - 2050980
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctc 299  Q
    ||||||||||||||||||||||  |||| |||||||||| |||||||| ||||    
T  2050928 agaaatgatatttgtacaaccattttgtaacaatttttggacaactttatctc 2050980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 3031835 - 3031886
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctct 298  Q
    |||||||||||||||||||||||| |   |||| ||||||||||||||||||    
T  3031835 agaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctct 3031886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 25842280 - 25842240
Alignment:
Q  244 taaatagaaatgatatttgtacaaccattgtgacaattttt 284  Q
    |||| |||||||||||||||||||  |||||||||||||||    
T  25842280 taaaaagaaatgatatttgtacaattattgtgacaattttt 25842240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 33243809 - 33243757
Alignment:
Q  249 agaaatgatatttgtacaacca-ttgtgacaatttttgt-acaactttctctc 299  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||    
T  33243809 agaaatgatatttgtataaccatttgtgacaatttttttgacaactttctctc 33243757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 5208397 - 5208344
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  5208397 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctct 5208344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 24235321 - 24235374
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  24235321 agaaatgatatttgtacaatcaatttgtgacaatttttgtacaactttctctct 24235374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 31318754 - 31318807
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  31318754 agaaatgatatttgtacaaccattttggtacaatttttgtacaactttctctct 31318807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 3222985 - 3223043
Alignment:
Q  244 taaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||| ||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||    
T  3222985 taaagagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctct 3223043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 1796367 - 1796420
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| |||||||||| |||||||||    
T  1796367 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttctctct 1796420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 1987783 - 1987730
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| |   |||||||||||||||||||||||||    
T  1987783 agaaatgatatttgtacaaccattttagtacaatttttgtacaactttctctct 1987730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 3475870 - 3475923
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  || |||||| ||||||||||||||||||||    
T  3475870 agaaatgatatttgtacaaccattttatgacaacttttgtacaactttctctct 3475923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 4577558 - 4577611
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| |   |||||||||||||||||||||||||    
T  4577558 agaaatgatatttgtacaaccattttcgtacaatttttgtacaactttctctct 4577611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 7037554 - 7037501
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| |||||||||| |||||||||    
T  7037554 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttctctct 7037501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 9032781 - 9032834
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||    
T  9032781 agaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctct 9032834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 27001479 - 27001426
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| || |||||||||||||||||    
T  27001479 agaaatgatatttgtacaaccaatttgtgacaacttctgtacaactttctctct 27001426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 44368272 - 44368219
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||    
T  44368272 agaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctct 44368219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 51377363 - 51377310
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| |||||| |||||||||||||    
T  51377363 agaaatgatatttgtacaaccaatttgtgacaacttttgtccaactttctctct 51377310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 53662498 - 53662445
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| ||| ||  |||||||||||||||||||||||||    
T  53662498 agaaatgatatttgtacaactattttgtaacaatttttgtacaactttctctct 53662445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 55268071 - 55268018
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||| |||||    
T  55268071 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttatctct 55268018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 43168784 - 43168733
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctct 298  Q
    ||||||||||||||||||||||  |||||||||||||| | |||||||||||    
T  43168784 agaaatgatatttgtacaaccattttgtgacaatttttttgcaactttctct 43168733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 33484175 - 33484125
Alignment:
Q  252 aatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||  |||| |||||||| ||||||||||||||    
T  33484175 aatgatatttgtacaaccattttgtgataatttttggacaactttctctct 33484125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 47288083 - 47288137
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgt-acaactttctctct 300  Q
    ||||||||||||||||||||||  |||| ||||||||||| ||||||||||||||    
T  47288083 agaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttctctct 47288137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 6093677 - 6093624
Alignment:
Q  249 agaaatgatatttgtacaaccattgtga--caatttttgtacaactttctctct 300  Q
    |||||||||||||||| ||||||| | |  ||||||||||||||||||||||||    
T  6093677 agaaatgatatttgtagaaccattttaatacaatttttgtacaactttctctct 6093624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 8026823 - 8026770
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||| ||||| ||  ||||||||| ||||||||||||||||||||    
T  8026823 agaaatgatatttatacaatcaatttgtgacaacttttgtacaactttctctct 8026770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 8680942 - 8680995
Alignment:
Q  249 agaaatgatatttgtacaaccat--tgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||  ||||| | |||||| ||||||||||||||    
T  8680942 agaaatgatatttgtacaaccattatgtgatattttttggacaactttctctct 8680995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 31221414 - 31221467
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| |||| |||||||||||||||    
T  31221414 agaaatgatatttgtacaatcaatttgtgacaacttttatacaactttctctct 31221467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 31240649 - 31240702
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||| || |||| |||||||||||||||    
T  31240649 agaaatgatatttgtacaaccactttgtgataacttttttacaactttctctct 31240702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 34259816 - 34259869
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| | ||| ||||||||||||||    
T  34259816 agaaatgatatttgtacaaccattttgtgacaactgttgaacaactttctctct 34259869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 44165910 - 44165963
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||| ||||||||||  ||||||||||||||    
T  44165910 agaaatgatatttgtacaaccactttgcgacaattttttgacaactttctctct 44165963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 52669679 - 52669626
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  |||||| || ||||||||||||||||||||    
T  52669679 agaaatgatatttgtacaaacaatttgtgataacttttgtacaactttctctct 52669626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 54803398 - 54803345
Alignment:
Q  249 agaaatgatatttgtacaaccattgtga--caatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| ||| ||   ||||||||||||||||||||||||    
T  54803398 agaaatgatatttgtacaactattttggtgcaatttttgtacaactttctctct 54803345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 55609240 - 55609182
Alignment:
Q  244 taaatagaaatgatatttgtacaaccattgtg-acaatttttgt-acaactttctctct 300  Q
    |||| |||||||||||||||||||||||| || |||| |||||| ||||||||||||||    
T  55609240 taaagagaaatgatatttgtacaaccattttgtacaacttttgtgacaactttctctct 55609182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 4896570 - 4896518
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctc 299  Q
    ||||||||||||||||||||||  ||||||||| ||||  |||||||||||||    
T  4896570 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctc 4896518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 13267548 - 13267496
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctc 299  Q
    ||||||||||||||||||||||  ||||||||| ||||| | |||||||||||    
T  13267548 agaaatgatatttgtacaaccattttgtgacaaattttggaaaactttctctc 13267496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 13389522 - 13389469
Alignment:
Q  249 agaaatgatatttgtacaaccatt-gtgacaatttttg-tacaactttctctct 300  Q
    |||||||||||||| ||||||||| |||||||||||||  ||||||||||||||    
T  13389522 agaaatgatatttgaacaaccattggtgacaatttttgcgacaactttctctct 13389469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 29863552 - 29863603
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctct 298  Q
    |||||||||||||||||||||||| ||  | || ||||||||||||||||||    
T  29863552 agaaatgatatttgtacaaccattttggtataacttttgtacaactttctct 29863603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 49194885 - 49194937
Alignment:
Q  249 agaaatgatatttgtacaacca-ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||| || ||||||| |||  ||||||||||||||    
T  49194885 agaaatgatatttgtacaaccatttatgacaatcttttgacaactttctctct 49194937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 52487337 - 52487286
Alignment:
Q  251 aaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||| |  |||||| |||||||||| ||||||||||||    
T  52487337 aaatgatatttgtacaactaatttgtgataatttttgtataactttctctct 52487286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 11327109 - 11327162
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  11327109 agaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctct 11327162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 32931988 - 32931935
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  32931988 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctct 32931935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 36818957 - 36819010
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  36818957 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctct 36819010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 30400232 - 30400173
Alignment:
Q  243 ttaaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||| |||||||||||||||||||| |  ||||||||| ||||||||||||||||||||    
T  30400232 ttaaagagaaatgatatttgtacaacaaatttgtgacaacttttgtacaactttctctct 30400173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 35376627 - 35376568
Alignment:
Q  243 ttaaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  35376627 ttaaagagaaatgatatttgtacaaccattttgtgacaatttttagacaactttctctct 35376568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 8254023 - 8254081
Alignment:
Q  244 taaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||| ||||||||||||||||||||||  ||||||||| ||| ||||||||||||||||    
T  8254023 taaagagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctct 8254081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 53932466 - 53932408
Alignment:
Q  244 taaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||| ||||||||||||||||||||||  ||||||||||||||| ||||||||| ||||    
T  53932466 taaagagaaatgatatttgtacaaccattttgtgacaatttttggacaactttcactct 53932408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 108432 - 108485
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  108432 agaaatgatatttgtacaaccactttgtgacaattttttgacaactttctctct 108485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 12792639 - 12792692
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  12792639 agaaatgatatttgtacaaccactttgtgacaatttttagacaactttctctct 12792692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 20215949 - 20216002
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  20215949 agaaatgatatttgtacaaccactttgtgacaatttttagacaactttctctct 20216002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 20714244 - 20714297
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| || |||||||||||||||||    
T  20714244 agaaatgatatttgtacaaccaatttgtgacaacttctgtacaactttctctct 20714297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 47141670 - 47141617
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  | |||||||||||||||||||||||    
T  47141670 agaaatgatatttgtacaaccattttggtataatttttgtacaactttctctct 47141617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 49761256 - 49761203
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| |   |||||||||||||||||||||||||    
T  49761256 agaaatgatatttgtacaaccattttctaacaatttttgtacaactttctctct 49761203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 50879596 - 50879649
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| |  ||||||||| ||||||||||||||||||||    
T  50879596 agaaatgatatttgtacaactaaattgtgacaacttttgtacaactttctctct 50879649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 5398919 - 5398971
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctc 299  Q
    ||||||||||||||||||||||  ||||||||||||||  |||||||||||||    
T  5398919 agaaatgatatttgtacaaccactttgtgacaattttttgacaactttctctc 5398971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 43441673 - 43441720
Alignment:
Q  249 agaaatgatatttgtacaaccat--tgtgacaatttttgtacaacttt 294  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||    
T  43441673 agaaatgatatttgtacaaccattatgtgacaatttttgaacaacttt 43441720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 50280157 - 50280106
Alignment:
Q  249 agaaatgatatttgtacaaccat--tgtgacaatttttgtacaactttctct 298  Q
    |||||||||||||||||||||||  | |||||| ||||||||||||||||||    
T  50280157 agaaatgatatttgtacaaccattctatgacaacttttgtacaactttctct 50280106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 48405411 - 48405465
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgt-acaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||    
T  48405411 agaaatgatatttgtacaaccattttgtgacaacttttgtaacaactttctctct 48405465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 462471 - 462418
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  462471 agaaatgatatttgtacaaccattttgtgacaacttttagacaactttctctct 462418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 1834507 - 1834560
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||| ||||||||||||||||| ||  |||||||||| ||||||||||||||    
T  1834507 agaaataatatttgtacaaccattttgctacaatttttgaacaactttctctct 1834560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 1901996 - 1901943
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  1901996 agaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctct 1901943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 1911442 - 1911389
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||    
T  1911442 agaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctct 1911389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 2280178 - 2280231
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| |   |||| ||||||||||||||||||||    
T  2280178 agaaatgatatttgtacaaccattttagtacaacttttgtacaactttctctct 2280231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 2482744 - 2482691
Alignment:
Q  249 agaaatgatatttgtacaaccatt--gtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||| |||||  ||||||| ||||| ||||||||||||||    
T  2482744 agaaatgatatttgtacatccattttgtgacaacttttgaacaactttctctct 2482691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 3069644 - 3069592
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||||||  |||||||||||||||||||    
T  3069644 agaaatgatatttgtacaaccaatttgtgacaa-ctttgtacaactttctctct 3069592  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 9557992 - 9557939
Alignment:
Q  249 agaaatgatatttgtacaaccattgtga--caatttttgtacaactttctctct 300  Q
    ||||||||||||| |||||| ||| |||  ||||||||||||||||||||||||    
T  9557992 agaaatgatatttatacaacaattttgatacaatttttgtacaactttctctct 9557939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 16295465 - 16295518
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||  |||| ||||||||||||||||||||    
T  16295465 agaaatgatatttgtacaaccaatttgatacaacttttgtacaactttctctct 16295518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 16479628 - 16479686
Alignment:
Q  244 taaatagaaatgatatttgtacaaccattgtg-acaatttttgt-acaactttctctct 300  Q
    |||| |||||||||||||||||||||||| || |||| |||||| ||||||||||||||    
T  16479628 taaagagaaatgatatttgtacaaccattttgtacaacttttgtgacaactttctctct 16479686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 25559705 - 25559758
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  | ||||||| |||||||||||||||    
T  25559705 agaaatgatatttgtacaaccattttggtataatttttatacaactttctctct 25559758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 31176510 - 31176457
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||| |||||||  ||||||||||||||    
T  31176510 agaaatgatatttgtacaaccactttgtgataatttttagacaactttctctct 31176457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 38944211 - 38944158
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| |  ||||||||| |||||||||| |||||||||    
T  38944211 agaaatgatatttgtacaactaatttgtgacaacttttgtacaattttctctct 38944158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 42643236 - 42643289
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||  |||| ||||||||||||||||||||    
T  42643236 agaaatgatatttgtacaaccaatttggaacaacttttgtacaactttctctct 42643289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 43409432 - 43409379
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||| |||||||| | ||||||||||||    
T  43409432 agaaatgatatttgtacaaccactttgtgataatttttggaaaactttctctct 43409379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 46344415 - 46344468
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||| |  |||| ||||||||||||||| |||||||||    
T  46344415 agaaatgatatttgtacaactaatttgttacaatttttgtacaattttctctct 46344468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 47056596 - 47056543
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    ||||||||||||||| |||||||| ||  |||||||||| ||||||||||||||    
T  47056596 agaaatgatatttgtgcaaccattttgcaacaatttttggacaactttctctct 47056543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 47849667 - 47849724
Alignment:
Q  243 ttaaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctct 298  Q
    ||||| ||||||||||||||||||||||  |||||| |||||||  ||||||||||||    
T  47849667 ttaaagagaaatgatatttgtacaaccattttgtgataattttttgacaactttctct 47849724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 50025768 - 50025715
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||||| ||  | || ||||||||||||||||||||    
T  50025768 agaaatgatatttgtacaaccattttggtataaattttgtacaactttctctct 50025715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 52454164 - 52454111
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||| ||  ||||||||| |||||| |||||||||||||    
T  52454164 agaaatgatatttgtacaatcaatttgtgacaacttttgttcaactttctctct 52454111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 38471644 - 38471696
Alignment:
Q  250 gaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||| ||  |||| |||||||||| |||||||||    
T  38471644 gaaatgatatttgtacaaccattttggtacaacttttgtacaattttctctct 38471696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 44689788 - 44689840
Alignment:
Q  244 taaatagaaatgatatttgtacaaccattgt--gacaatttttgtacaacttt 294  Q
    ||||||||||||||||||||||||||||| |   |||| ||||||||||||||    
T  44689788 taaatagaaatgatatttgtacaaccatttttgtacaacttttgtacaacttt 44689840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 3957831 - 3957883
Alignment:
Q  249 agaaatgatatttgtacaacc-attgtgacaatttttgtacaactttctctct 300  Q
    |||||||||||||||||||||  || |||||| |||| |||||||||||||||    
T  3957831 agaaatgatatttgtacaaccttttttgacaacttttatacaactttctctct 3957883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 9159106 - 9159055
Alignment:
Q  249 agaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctct 298  Q
    |||||||||||||||||||||||| |   ||||||||||||||| |||||||    
T  9159106 agaaatgatatttgtacaaccatttttgtacaatttttgtacaattttctct 9159055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 39604322 - 39604263
Alignment:
Q  243 ttaaatagaaatgatatttgtacaaccattgt--gacaatttttgtacaactttctctct 300  Q
    ||||| |||||||||||||||||||||||| |   |||||||||  ||||||||||||||    
T  39604322 ttaaagagaaatgatatttgtacaaccatttttcaacaattttttgacaactttctctct 39604263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 52100262 - 52100313
Alignment:
Q  249 agaaatgatatttgtacaaccattgtg--acaatttttgtacaactttctct 298  Q
    |||||||||||||||||||||||| |   | |||||||||||||||||||||    
T  52100262 agaaatgatatttgtacaaccattttttaataatttttgtacaactttctct 52100313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 54233538 - 54233487
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctct 298  Q
    ||||||||||||||||||||||  || | |||| ||||||||||||||||||    
T  54233538 agaaatgatatttgtacaaccatttttttacaacttttgtacaactttctct 54233487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 18596 - 18649
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    ||||||||||||||||||||||  |||||| || ||||||||||||||||||||    
T  18596 agaaatgatatttgtacaaccaatttgtgataacttttgtacaactttctctct 18649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 219740 - 219685
Alignment:
Q  243 ttaaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttct 296  Q
    ||||| ||||||||||||||||||||||  ||||||||| ||||  ||||||||||    
T  219740 ttaaagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttct 219685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 1571 - 1513
Alignment:
Q  244 taaatagaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctct 300  Q
    |||| |||||||||||||||| |||||  ||||||||| |||||||||| |||||||||    
T  1571 taaagagaaatgatatttgtataaccaatttgtgacaacttttgtacaattttctctct 1513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 113626 - 113678
Alignment:
Q  249 agaaatgatatttgtacaacca--ttgtgacaatttttgtacaactttctctc 299  Q
    ||||||||||||||||||||||  ||||||||| ||||  |||||||||||||    
T  113626 agaaatgatatttgtacaaccactttgtgacaactttttaacaactttctctc 113678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 35997 - 36056
Alignment:
Q  243 ttaaatagaaatgatatttgtacaac--cattgtgacaatttttgtacaactttctctct 300  Q
    ||||| ||||||||||||||||||||  | |||||| |||||||  ||||||||||||||    
T  35997 ttaaagagaaatgatatttgtacaactactttgtgataattttttgacaactttctctct 36056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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