View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19448_low_23 (Length: 257)
Name: NF19448_low_23
Description: NF19448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19448_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 33667206 - 33666970
Alignment:
| Q |
1 |
tgcattttagaagtcaaaacattaatactcgtttgatcaagatcgaaatgttgatattcaaattcatataatcttatataagtcaagtgaccaatgtatt |
100 |
Q |
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| T |
33667206 |
tgcattttagaagtcaaaacattgataatcgtttgatgaagatcgaaatgttcatattcaaattcatataatctgatataggtcaagtgaccaatgtatc |
33667107 |
T |
|
| Q |
101 |
ccaactaagtcaatgctatattatgacctgatgaatattctccaccaatattctatacatgatatagcattcaacgaggcatagaaaataatcaatttta |
200 |
Q |
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|||||||| | |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |
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| T |
33667106 |
ccaactaaatgaatgctatattatgacctaatgaatattctccaccaatgttctatacatgatatagcattcaacgagacatagaaaataaccaatttta |
33667007 |
T |
|
| Q |
201 |
gttgattttaaaatttgctacggaactaagttcttag |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
33667006 |
gttgattttaaaatttgctacggaactaagttcttag |
33666970 |
T |
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