View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1944_high_28 (Length: 281)
Name: NF1944_high_28
Description: NF1944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1944_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 39033398 - 39033653
Alignment:
| Q |
18 |
atccaaagattcttcttatagcttgaaaacttaggaaattgatttctgcaagcattagcatcgtcaatcacgtatagagatcacgaatatgattgattgt |
117 |
Q |
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| T |
39033398 |
atccaaagattcttcttatagcttgaaaacttaggaaattgatttctgcaagcattagcatcgtcaatcacgtatagagatcacgaatatgattgattgt |
39033497 |
T |
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| Q |
118 |
cattaagaaattataaagtgagcatcgtattttaaaggaaactagattatcatacaaaatattacagtaactttaggttttgattaaactcaacttatct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39033498 |
cattaagaaattataaagtgagcatcgtattttaaaggaaactaaattatcatacaaaatattacagtaactttaggttttgattaaactcaacttatct |
39033597 |
T |
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| Q |
218 |
atcttaattaatttgattattttttagaaaatctttataaactaagttagtattat |
273 |
Q |
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| T |
39033598 |
atcttaattaatttgattattttttagaaaatctttataaactaagttaatattat |
39033653 |
T |
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