View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1944_low_10 (Length: 475)

Name: NF1944_low_10
Description: NF1944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1944_low_10
NF1944_low_10
[»] chr1 (13 HSPs)
chr1 (190-459)||(32191041-32191330)
chr1 (311-377)||(34123148-34123214)
chr1 (316-440)||(31847318-31847442)
chr1 (112-162)||(32191323-32191373)
chr1 (399-440)||(50441320-50441361)
chr1 (296-391)||(24603022-24603116)
chr1 (311-348)||(9450239-9450276)
chr1 (326-431)||(34062578-34062683)
chr1 (311-357)||(17916174-17916220)
chr1 (296-356)||(8041149-8041210)
chr1 (323-376)||(25485001-25485054)
chr1 (332-377)||(39126966-39127011)
chr1 (302-342)||(44574736-44574776)
[»] chr8 (11 HSPs)
chr8 (296-443)||(38924427-38924574)
chr8 (302-370)||(559988-560056)
chr8 (296-377)||(32729443-32729525)
chr8 (301-376)||(37616274-37616349)
chr8 (302-372)||(10340254-10340324)
chr8 (296-440)||(34273042-34273186)
chr8 (296-348)||(33435404-33435456)
chr8 (323-378)||(21150238-21150293)
chr8 (301-371)||(29204637-29204707)
chr8 (295-341)||(30370054-30370100)
chr8 (296-357)||(8238779-8238840)
[»] chr5 (5 HSPs)
chr5 (264-377)||(23311750-23311868)
chr5 (326-440)||(35943586-35943700)
chr5 (329-374)||(2584160-2584205)
chr5 (320-357)||(9962911-9962948)
chr5 (296-357)||(35943532-35943593)
[»] chr4 (6 HSPs)
chr4 (296-374)||(40423292-40423370)
chr4 (296-347)||(9954548-9954599)
chr4 (329-440)||(24672769-24672880)
chr4 (296-357)||(5961807-5961868)
chr4 (296-357)||(24673012-24673073)
chr4 (326-376)||(43115577-43115627)
[»] chr7 (9 HSPs)
chr7 (296-357)||(101285-101346)
chr7 (296-357)||(48078606-48078667)
chr7 (311-377)||(23018473-23018539)
chr7 (296-356)||(35851960-35852020)
chr7 (383-438)||(21346314-21346369)
chr7 (324-370)||(11687825-11687871)
chr7 (296-370)||(25690745-25690819)
chr7 (262-371)||(41195681-41195795)
chr7 (301-341)||(21346399-21346439)
[»] chr6 (3 HSPs)
chr6 (301-342)||(22682592-22682633)
chr6 (301-377)||(2608366-2608442)
chr6 (302-357)||(20694597-20694652)
[»] chr2 (10 HSPs)
chr2 (296-377)||(34557301-34557382)
chr2 (296-351)||(15538963-15539018)
chr2 (296-439)||(28314577-28314720)
chr2 (296-347)||(21488875-21488926)
chr2 (256-374)||(30481668-30481791)
chr2 (326-376)||(12670752-12670802)
chr2 (326-376)||(33710562-33710612)
chr2 (396-441)||(14442017-14442062)
chr2 (296-376)||(14442125-14442205)
chr2 (301-357)||(15404949-15405005)
[»] chr3 (7 HSPs)
chr3 (301-357)||(581049-581105)
chr3 (302-377)||(50670070-50670145)
chr3 (296-342)||(25258079-25258125)
chr3 (296-342)||(27177349-27177395)
chr3 (312-357)||(52205031-52205076)
chr3 (302-342)||(37058992-37059032)
chr3 (216-252)||(46620902-46620938)
[»] scaffold0110 (1 HSPs)
scaffold0110 (311-441)||(31307-31437)


Alignment Details
Target: chr1 (Bit Score: 165; Significance: 5e-88; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 190 - 459
Target Start/End: Complemental strand, 32191330 - 32191041
Alignment:
Q  190 ctatgaggtacaactaatttgtctggaaattgctcttctccctcttaaaattaatcattctct--------------------ctcgttcgacatttttt 269  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||                    ||||||||||||||||     
T  32191330 ctatgaggcacaactaatttttctggaaattgctcttctccctcttaaaattactcattctcttaactcagcatgagttaactctcgttcgacatttttc 32191231  T
Q  270 agcgtgagttaactcgcgctgatactgatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaa 369  Q
    |||||||||||||| || |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  32191230 agcgtgagttaacttgcactgacactgattagttcaatcattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaatctacgctgaaaa 32191131  T
Q  370 atgtcgagttagtgttaactcataccgagttaaaggaataagtaattttgaaagggagaaaagcaattttctattttttgttgttgtgag 459  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32191130 atgtcgagtgagtgttaactcataccgaattaagggaataagtaattttgaaagggagaaaagcaattttcaattttttgttgttgtgag 32191041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 34123214 - 34123148
Alignment:
Q  311 tttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgag 377  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||    
T  34123214 tttttaagctggttcaaccgattttaaaagtgtcagcgtgagttaacttccgctgaaaaatgtcgag 34123148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 316 - 440
Target Start/End: Complemental strand, 31847442 - 31847318
Alignment:
Q  316 aagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgagttagtgttaactcataccgagttaaaggaataagtaat 415  Q
    |||| ||||| |||||||||||||||| ||||| ||||||||  ||| ||||||||||||||     |||||||  | | | || |||||||| || |||    
T  31847442 aagtcggttcgaccgatcttaaaagtgtcagcgagagttaactcacgctgaaaaatgtcgagcgtaagttaactattgctgggtcaaaggaatgagcaat 31847343  T
Q  416 tttgaaagggagaaaagcaattttc 440  Q
    |||||||||||||| ||||||||||    
T  31847342 tttgaaagggagaagagcaattttc 31847318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 32191373 - 32191323
Alignment:
Q  112 tgtatattgttaaagaggtgtataagttagtagtggatcataactatgagg 162  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  32191373 tgtatattgttaaagaggtgtataagttagcgttggatcataactatgagg 32191323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 440
Target Start/End: Original strand, 50441320 - 50441361
Alignment:
Q  399 ttaaaggaataagtaattttgaaagggagaaaagcaattttc 440  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  50441320 ttaaaggaaaaagtaattttgaaagggagaaaagcaattttc 50441361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 391
Target Start/End: Complemental strand, 24603116 - 24603022
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgagttagtgttaactca 391  Q
    |||| ||||| | |||||||||| |||||||||||||||||||||||  | | |||||||||  ||| |||||||||||||||  | |||||||||    
T  24603116 gatcggttcactaattttttaagctggttcaaccgatcttaaaagtgttatcatgagttaactcacg-tgaaaaatgtcgagtgtgagttaactca 24603022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 348
Target Start/End: Original strand, 9450239 - 9450276
Alignment:
Q  311 tttttaagttggttcaaccgatcttaaaagtgccagcg 348  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  9450239 tttttaagtcggttcaaccgatcttaaaagtgccagcg 9450276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 34062683 - 34062578
Alignment:
Q  326 aaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgagttagtgttaactcataccgagttaaaggaataagtaattttgaaaggg 425  Q
    ||||||| ||||||||| ||||||||||| ||  ||| |||||||||| |||   | |||||||||||| || ||||  ||||||  |||||||| ||||    
T  34062683 aaccgattttaaaagtgtcagcgtgagttcactcacgctgaaaaatgttgagcgtgagttaactcatacagaattaagagaataaacaattttgataggg 34062584  T
Q  426 agaaaa 431  Q
    ||||||    
T  34062583 agaaaa 34062578  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 17916220 - 17916174
Alignment:
Q  311 tttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    ||||||||| ||||||| |||||||||||||| ||||| ||||||||    
T  17916220 tttttaagtcggttcaatcgatcttaaaagtgtcagcgagagttaac 17916174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 8041149 - 8041210
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccg-atcttaaaagtgccagcgtgagttaa 356  Q
    |||| ||||||| | |||||||||||||||||||| |||||||||||   ||||||||||||    
T  8041149 gatcggttcaatcaatttttaagttggttcaaccgaatcttaaaagttttagcgtgagttaa 8041210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 25485001 - 25485054
Alignment:
Q  323 ttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcga 376  Q
    ||||| |||||||||||||| ||||||||||||||  ||| || ||||||||||    
T  25485001 ttcaaacgatcttaaaagtggcagcgtgagttaactcacgctggaaaatgtcga 25485054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 39126966 - 39127011
Alignment:
Q  332 tcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgag 377  Q
    ||||||||||| ||||||||||||||  ||| ||||||||||||||    
T  39126966 tcttaaaagtgtcagcgtgagttaactcacgctgaaaaatgtcgag 39127011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 44574736 - 44574776
Alignment:
Q  302 ttcaattattttttaagttggttcaaccgatcttaaaagtg 342  Q
    |||||||| ||||||| || |||||||||||||||||||||    
T  44574736 ttcaattactttttaaattagttcaaccgatcttaaaagtg 44574776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 5e-23; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 296 - 443
Target Start/End: Original strand, 38924427 - 38924574
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgagttagtgttaactcatacc 395  Q
    |||| ||||||| | ||||||||| |||||||| ||||||||||||| |||||||||||||| | || ||||||||| |||||  | |||||||||| |     
T  38924427 gatcggttcaatcactttttaagtcggttcaactgatcttaaaagtgacagcgtgagttaacttccgctgaaaaatgccgagtgggagttaactcatgct 38924526  T
Q  396 gagttaaaggaataagtaattttgaaagggagaaaagcaattttctat 443  Q
    |||||||   ||| ||||||||| || ||||||| ||| |||||||||    
T  38924527 gagttaagcaaatgagtaattttaaatgggagaagagccattttctat 38924574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 559988 - 560056
Alignment:
Q  302 ttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaa 370  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||  |||||||||||    
T  559988 ttcaattattttttaagttggttcaaccgattttaaaattgccagcgtgagttaactcacgttgaaaaa 560056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 296 - 377
Target Start/End: Original strand, 32729443 - 32729525
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacct-acgttgaaaaatgtcgag 377  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||  |||||| ||  |||||||||||||||||    
T  32729443 gatcagttcaattattttttaagtcggttcaaccgatcttaaaagtgtcagcgacagttaaactgccgttgaaaaatgtcgag 32729525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 37616349 - 37616274
Alignment:
Q  301 gttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcga 376  Q
    ||||||| || ||||||||||| |||||| |||||||||||| ||||||||||||||| ||| |||||||||||||    
T  37616349 gttcaatcatcttttaagttggatcaaccaatcttaaaagtgtcagcgtgagttaacccacgctgaaaaatgtcga 37616274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 372
Target Start/End: Original strand, 10340254 - 10340324
Alignment:
Q  302 ttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatg 372  Q
    |||||| |||||||||||||| ||  ||||||||||||||| ||||||||||||||  |||||||||||||    
T  10340254 ttcaatcattttttaagttgggtcggccgatcttaaaagtgtcagcgtgagttaactcacgttgaaaaatg 10340324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 440
Target Start/End: Complemental strand, 34273186 - 34273042
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgagttagtgttaactcatacc 395  Q
    |||| ||||||| | | ||||||| |||||||||||| ||||||||| |||||||||||||   ||| ||||||||| ||||     |||||||||  |     
T  34273186 gatcggttcaatcactgtttaagtcggttcaaccgattttaaaagtgtcagcgtgagttaattcacgctgaaaaatgccgagcagaagttaactcacgct 34273087  T
Q  396 gagttaaaggaataagtaattttgaaagggagaaaagcaattttc 440  Q
    ||||||| | ||| || |||||| |||||||||| ||||||||||    
T  34273086 gagttaaggaaatgagcaattttaaaagggagaagagcaattttc 34273042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 33435456 - 33435404
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcg 348  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||||| |||||    
T  33435456 gatcagtttaattactttttaagtcggttcaaccgatcttaaaagtgacagcg 33435404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 21150238 - 21150293
Alignment:
Q  323 ttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgagt 378  Q
    |||||||||||||||||||| |||||| |||||||  |||||||||||| ||||||    
T  21150238 ttcaaccgatcttaaaagtgtcagcgtaagttaactcacgttgaaaaatatcgagt 21150293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 29204637 - 29204707
Alignment:
Q  301 gttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaat 371  Q
    ||||||| | ||||||||| || ||||| ||||||||||||| |||||| ||||||| |||| ||||||||    
T  29204637 gttcaatcactttttaagtcggatcaactgatcttaaaagtgacagcgtaagttaacttacgctgaaaaat 29204707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 30370100 - 30370054
Alignment:
Q  295 tgatcagttcaattattttttaagttggttcaaccgatcttaaaagt 341  Q
    ||||| ||||||| | |||||||||||||||||||||| ||||||||    
T  30370100 tgatcggttcaatcactttttaagttggttcaaccgattttaaaagt 30370054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 8238779 - 8238840
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    |||||||||||| | ||||| ||| || |||||||||||||||||||| |  ||||||||||    
T  8238779 gatcagttcaatcacttttttagtcggatcaaccgatcttaaaagtgctattgtgagttaac 8238840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 23311750 - 23311868
Alignment:
Q  264 ttttttagcgtgagttaactcgcgctgatact-----gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacc 358  Q
    ||||||||||||||||||||| || || || |     |||| ||| |||||||||||||||  |||||||| |||||||||||| || |||||||||||     
T  23311750 ttttttagcgtgagttaactcacgttggtatttttaagatcggttaaattattttttaagtcagttcaaccaatcttaaaagtgtcaacgtgagttaact 23311849  T
Q  359 tacgttgaaaaatgtcgag 377  Q
    |||||| |||||| |||||    
T  23311850 tacgttaaaaaatatcgag 23311868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 440
Target Start/End: Original strand, 35943586 - 35943700
Alignment:
Q  326 aaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgagttagtgttaactcataccgagttaaaggaataagtaattttgaaaggg 425  Q
    |||||||||||||||||| || |||| ||||| |||  |||||||||||||||  |  ||||||||  | || |||| ||||| || |||||||||||||    
T  35943586 aaccgatcttaaaagtgctagtgtgaattaacttacactgaaaaatgtcgagtgtgaattaactcacgcggaattaagggaatgagcaattttgaaaggg 35943685  T
Q  426 agaaaagcaattttc 440  Q
      || ||||||||||    
T  35943686 gaaagagcaattttc 35943700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 374
Target Start/End: Original strand, 2584160 - 2584205
Alignment:
Q  329 cgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtc 374  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||    
T  2584160 cgatcttaaaagtgcatgcgtgagttaacttacgttgaaaaatgtc 2584205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 9962948 - 9962911
Alignment:
Q  320 tggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  9962948 tggttcaaccgatcttaaaaatgctagcgtgagttaac 9962911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 357
Target Start/End: Complemental strand, 35943593 - 35943532
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    |||| |||||||||||||||||||  ||||||||||| |||| | || |||| |||||||||    
T  35943593 gatcggttcaattattttttaagtcagttcaaccgattttaagaatgtcagcatgagttaac 35943532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 40423370 - 40423292
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtc 374  Q
    |||| ||||||| | ||||||||| ||||||||  |||||||||||| |||| ||||||||| | ||||||||||||||    
T  40423370 gatcggttcaatcactttttaagtcggttcaacaaatcttaaaagtgtcagcatgagttaacttccgttgaaaaatgtc 40423292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 9954548 - 9954599
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagc 347  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||| ||||    
T  9954548 gatcaattcaattattttttaagttgggtcaatcgatcttaaaagtgacagc 9954599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 440
Target Start/End: Original strand, 24672769 - 24672880
Alignment:
Q  329 cgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgagttagtgttaactcataccgagttaaaggaataagtaattttgaaagggaga 428  Q
    |||||| || ||||||| |||||||||||   || ||||||||| |||||  | ||||||||  || |||| |||||||| | |||||||||| ||||||    
T  24672769 cgatctaaatagtgccaacgtgagttaactaccgctgaaaaatgccgagtgtgggttaactcccactgagtcaaaggaatgattaattttgaatgggaga 24672868  T
Q  429 aaagcaattttc 440  Q
    | ||||||||||    
T  24672869 agagcaattttc 24672880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 5961807 - 5961868
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    |||||||||||| | |||||||||||| ||||||||||||||||   ||||| |||||||||    
T  5961807 gatcagttcaatcactttttaagttggctcaaccgatcttaaaaacaccagcatgagttaac 5961868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 357
Target Start/End: Complemental strand, 24673073 - 24673012
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    |||||||||||| | |||||| || || |||||| ||||||||||||||| |||||||||||    
T  24673073 gatcagttcaatcactttttatgtcgggtcaaccaatcttaaaagtgccaacgtgagttaac 24673012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 376
Target Start/End: Complemental strand, 43115627 - 43115577
Alignment:
Q  326 aaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcga 376  Q
    ||||||||||||||||| ||| ||||||||||  ||| |||||||||||||    
T  43115627 aaccgatcttaaaagtgtcagtgtgagttaactcacgctgaaaaatgtcga 43115577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 357
Target Start/End: Complemental strand, 101346 - 101285
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    |||||||||||| | |||||||||  | ||||||||||||||||||| ||||||||||||||    
T  101346 gatcagttcaatcactttttaagtcaggtcaaccgatcttaaaagtgtcagcgtgagttaac 101285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 48078606 - 48078667
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    ||||| |||||| | ||||||||| ||||||||||||||||||||||||| || ||||||||    
T  48078606 gatcaattcaatcactttttaagtcggttcaaccgatcttaaaagtgccaacgagagttaac 48078667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 23018539 - 23018473
Alignment:
Q  311 tttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgag 377  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||    |||||||||||| ||||    
T  23018539 tttttaagtcggtttaaccgatcttaaaagtgccagcgtcagttaattgccgttgaaaaatgccgag 23018473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 35852020 - 35851960
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaa 356  Q
    |||| ||||||| | ||| ||||| |||||||||||||||||||||| ||| |||||||||    
T  35852020 gatcggttcaatcactttctaagtcggttcaaccgatcttaaaagtgtcagtgtgagttaa 35851960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 21346369 - 21346314
Alignment:
Q  383 gttaactcataccgagttaaaggaataagtaattttgaaagggagaaaagcaattt 438  Q
    |||||||||| | |||||||  |||||||||||||||||| |||||| ||||||||    
T  21346369 gttaactcatgctgagttaagagaataagtaattttgaaaaggagaagagcaattt 21346314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 11687825 - 11687871
Alignment:
Q  324 tcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaa 370  Q
    ||||||||||||||||||| ||||||||||||||  ||| |||||||    
T  11687825 tcaaccgatcttaaaagtgacagcgtgagttaactcacgctgaaaaa 11687871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 370
Target Start/End: Original strand, 25690745 - 25690819
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaa 370  Q
    |||| ||||||| | ||||||||  |||||||||||||||||||||| |||| ||| |||||  ||| |||||||    
T  25690745 gatcggttcaatcactttttaagccggttcaaccgatcttaaaagtgtcagcatgaattaactcacgctgaaaaa 25690819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 371
Target Start/End: Original strand, 41195681 - 41195795
Alignment:
Q  262 cattttttagcgtgagttaactcgcgctgatactgatcag-----ttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaa 356  Q
    ||||||||||||| ||||||||| |||||| |||  | ||     |||||| | |||||||| ||||||||| ||||||||||||| || | ||||||||    
T  41195681 cattttttagcgttagttaactcacgctgacacttttaaggttgattcaatcactttttaagctggttcaactgatcttaaaagtgtcaacttgagttaa 41195780  T
Q  357 cctacgttgaaaaat 371  Q
    | | || ||||||||    
T  41195781 cttccgctgaaaaat 41195795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 21346399 - 21346439
Alignment:
Q  301 gttcaattattttttaagttggttcaaccgatcttaaaagt 341  Q
    ||||||| | ||||||||||||||||||||| |||||||||    
T  21346399 gttcaatcactttttaagttggttcaaccgaccttaaaagt 21346439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 22682592 - 22682633
Alignment:
Q  301 gttcaattattttttaagttggttcaaccgatcttaaaagtg 342  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  22682592 gttcaatcattttttaagttggttcaaccgatcttaaaagtg 22682633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 377
Target Start/End: Complemental strand, 2608442 - 2608366
Alignment:
Q  301 gttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgag 377  Q
    ||||||| | ||||||||||||||||||| || |||||| ||| ||||||||||||   ||| |||||||| |||||    
T  2608442 gttcaatcactttttaagttggttcaaccaattttaaaaatgctagcgtgagttaaatcacgctgaaaaatatcgag 2608366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 20694652 - 20694597
Alignment:
Q  302 ttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    |||||| | |||||||||||  |||||| ||||||||||||||| |||||||||||    
T  20694652 ttcaatcactttttaagttgagtcaaccaatcttaaaagtgccaccgtgagttaac 20694597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 377
Target Start/End: Complemental strand, 34557382 - 34557301
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgag 377  Q
    |||| ||||||| ||||||||| | ||||||| |||||||||||||||  | ||||||||||  ||| ||||||||||||||    
T  34557382 gatctgttcaatcattttttaaatcggttcaatcgatcttaaaagtgctggtgtgagttaactcacgctgaaaaatgtcgag 34557301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 351
Target Start/End: Original strand, 15538963 - 15539018
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtga 351  Q
    |||| ||||||||| ||||||||| ||||||| |||||||||||||| ||||||||    
T  15538963 gatcggttcaattactttttaagtcggttcaatcgatcttaaaagtgtcagcgtga 15539018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 439
Target Start/End: Complemental strand, 28314720 - 28314577
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac-ctacgttgaaaaatgtcgagttagtgttaactcatac 394  Q
    |||| ||||||| | ||||||| |||||| ||||||||||||||||| ||||  |||||||| ||| ||||||||||  | ||  |  |||||||   ||    
T  28314720 gatcggttcaatcactttttaaattggttgaaccgatcttaaaagtgtcagcaggagttaactcta-gttgaaaaataccaagcaacagttaactttaac 28314622  T
Q  395 cgagttaaaggaataagtaattttgaaagggagaaaagcaatttt 439  Q
     ||||||| ||||| | |||||||||||||||||| | |||||||    
T  28314621 tgagttaatggaatgaataattttgaaagggagaagaacaatttt 28314577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 21488875 - 21488926
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagc 347  Q
    |||| ||||||| |||||||||||  ||||||||||||||||||||| ||||    
T  21488875 gatcggttcaatcattttttaagtcagttcaaccgatcttaaaagtgtcagc 21488926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 374
Target Start/End: Original strand, 30481668 - 30481791
Alignment:
Q  256 gttcgacattttttagcgtgagttaactcgcgctgatact-----gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtg 350  Q
    ||||||||||||||||||||||||||||| | |||  |||     |||||||||||| ||||||||||    ||||||| ||||||||||| | || ||     
T  30481668 gttcgacattttttagcgtgagttaactcacactggcacttttaagatcagttcaataattttttaagccaattcaacctatcttaaaagttctagtgta 30481767  T
Q  351 agttaacctacgttgaaaaatgtc 374  Q
    | ||||| | || |||||||||||    
T  30481768 aattaacttccgatgaaaaatgtc 30481791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 376
Target Start/End: Complemental strand, 12670802 - 12670752
Alignment:
Q  326 aaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcga 376  Q
    ||||||||||||||||| |||||||||||||   |||||| ||||||||||    
T  12670802 aaccgatcttaaaagtgtcagcgtgagttaagtcacgttgcaaaatgtcga 12670752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 376
Target Start/End: Complemental strand, 33710612 - 33710562
Alignment:
Q  326 aaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcga 376  Q
    ||||||||||||||||| |||||| |||||||  ||| |||||||||||||    
T  33710612 aaccgatcttaaaagtgtcagcgtaagttaactcacgctgaaaaatgtcga 33710562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 441
Target Start/End: Complemental strand, 14442062 - 14442017
Alignment:
Q  396 gagttaaaggaataagtaattttgaaagggagaaaagcaattttct 441  Q
    |||||||  |||| |||||||||||||||||||| |||||||||||    
T  14442062 gagttaagagaatgagtaattttgaaagggagaagagcaattttct 14442017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 376
Target Start/End: Original strand, 14442125 - 14442205
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcga 376  Q
    ||||||| |||| | ||||||||  | |||||| ||||||||| |||| |||||||||||||| ||  |||||||| ||||    
T  14442125 gatcagtacaatcactttttaagccgattcaactgatcttaaaggtgctagcgtgagttaacccacactgaaaaatatcga 14442205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 357
Target Start/End: Original strand, 15404949 - 15405005
Alignment:
Q  301 gttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    ||||||| | ||||||||| || ||||||||| ||||||||| || |||||||||||    
T  15404949 gttcaatcactttttaagtcgggtcaaccgattttaaaagtgtcaacgtgagttaac 15405005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 581105 - 581049
Alignment:
Q  301 gttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    ||||||| | |||||||||  |||||||||||||||||||| |||||||||||||||    
T  581105 gttcaataactttttaagtctgttcaaccgatcttaaaagtaccagcgtgagttaac 581049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 377
Target Start/End: Complemental strand, 50670145 - 50670070
Alignment:
Q  302 ttcaattattttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgag 377  Q
    |||||| |||||||| ||  ||||||||||| ||||||||| |||||| |||||||  ||| ||||||||||||||    
T  50670145 ttcaatcattttttacgtaagttcaaccgattttaaaagtgtcagcgtaagttaactcacgctgaaaaatgtcgag 50670070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 342
Target Start/End: Complemental strand, 25258125 - 25258079
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtg 342  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||||    
T  25258125 gatcagttcaatcactttttaagtcggttcaaccgatcttaaaagtg 25258079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 342
Target Start/End: Original strand, 27177349 - 27177395
Alignment:
Q  296 gatcagttcaattattttttaagttggttcaaccgatcttaaaagtg 342  Q
    |||| ||||||| |||||||||||||| |||||||||||||||||||    
T  27177349 gatcggttcaatcattttttaagttgggtcaaccgatcttaaaagtg 27177395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 52205076 - 52205031
Alignment:
Q  312 ttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaac 357  Q
    |||||||| || ||||||||||||||||||| |||| |||||||||    
T  52205076 ttttaagtcgggtcaaccgatcttaaaagtgtcagcatgagttaac 52205031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 37059032 - 37058992
Alignment:
Q  302 ttcaattattttttaagttggttcaaccgatcttaaaagtg 342  Q
    |||||| ||||||||||| | ||||||||||||||||||||    
T  37059032 ttcaatcattttttaagtcgattcaaccgatcttaaaagtg 37058992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 46620938 - 46620902
Alignment:
Q  216 aaattgctcttctccctcttaaaattaatcattctct 252  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  46620938 aaatggctcttctccctcttaaaattgatcattctct 46620902  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 441
Target Start/End: Complemental strand, 31437 - 31307
Alignment:
Q  311 tttttaagttggttcaaccgatcttaaaagtgccagcgtgagttaacctacgttgaaaaatgtcgagttagtgttaactcataccgagttaaaggaataa 410  Q
    |||||||| |||||||||| ||||||||| ||   | ||||||||||  ||| ||||||||| |||    | |||||||||| | || ||||  |||| |    
T  31437 tttttaagctggttcaaccaatcttaaaaatgtatgtgtgagttaactcacgctgaaaaatgccgaacgtgagttaactcatgctgaattaagagaatga 31338  T
Q  411 gtaattttgaaagggagaaaagcaattttct 441  Q
    | |||||||||||| |||| |||||||||||    
T  31337 gcaattttgaaaggaagaagagcaattttct 31307  T

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