View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1944_low_24 (Length: 369)

Name: NF1944_low_24
Description: NF1944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1944_low_24
NF1944_low_24
[»] chr2 (45 HSPs)
chr2 (1-236)||(1583312-1583547)
chr2 (1-219)||(35047198-35047416)
chr2 (3-216)||(44255970-44256183)
chr2 (1-216)||(769366-769581)
chr2 (1-216)||(33188789-33189004)
chr2 (1-214)||(11141639-11141852)
chr2 (3-216)||(39630561-39630775)
chr2 (1-216)||(3092579-3092795)
chr2 (54-216)||(7309436-7309598)
chr2 (15-219)||(13018095-13018297)
chr2 (1-218)||(8735963-8736180)
chr2 (16-216)||(41585194-41585393)
chr2 (1-218)||(28021704-28021921)
chr2 (1-216)||(19231017-19231230)
chr2 (18-216)||(2925002-2925200)
chr2 (54-218)||(14306362-14306526)
chr2 (15-219)||(21504799-21505002)
chr2 (15-216)||(17905990-17906191)
chr2 (1-216)||(44205193-44205406)
chr2 (1-219)||(32839185-32839395)
chr2 (15-219)||(7167185-7167390)
chr2 (56-190)||(11595195-11595328)
chr2 (56-190)||(11607097-11607230)
chr2 (101-213)||(19193746-19193858)
chr2 (15-217)||(32839714-32839916)
chr2 (15-214)||(7611421-7611621)
chr2 (141-221)||(19072305-19072385)
chr2 (15-216)||(30698630-30698830)
chr2 (139-216)||(31703923-31704000)
chr2 (139-218)||(31941428-31941507)
chr2 (113-195)||(30265777-30265859)
chr2 (15-225)||(45094000-45094202)
chr2 (56-214)||(2274312-2274467)
chr2 (158-219)||(6749566-6749627)
chr2 (58-211)||(29278591-29278742)
chr2 (156-216)||(10480269-10480329)
chr2 (156-220)||(11794045-11794109)
chr2 (156-216)||(7684594-7684654)
chr2 (156-212)||(11532118-11532174)
chr2 (15-93)||(19072223-19072299)
chr2 (161-210)||(6996371-6996420)
chr2 (156-218)||(8736501-8736563)
chr2 (139-218)||(11799265-11799343)
chr2 (168-220)||(31220873-31220922)
chr2 (109-217)||(36302410-36302516)
[»] chr8 (45 HSPs)
chr8 (1-220)||(44346217-44346437)
chr8 (1-222)||(43185314-43185535)
chr8 (1-210)||(40733641-40733850)
chr8 (15-218)||(29256911-29257115)
chr8 (1-216)||(14573-14787)
chr8 (1-216)||(33376829-33377046)
chr8 (3-215)||(31980047-31980262)
chr8 (1-218)||(29482339-29482554)
chr8 (3-215)||(31976666-31976881)
chr8 (1-216)||(1087846-1088062)
chr8 (1-216)||(33986330-33986546)
chr8 (54-219)||(29611713-29611875)
chr8 (1-214)||(26519984-26520196)
chr8 (17-215)||(10593423-10593620)
chr8 (1-218)||(35978590-35978798)
chr8 (60-218)||(34009082-34009240)
chr8 (15-220)||(9982996-9983201)
chr8 (15-220)||(24051619-24051825)
chr8 (15-214)||(13144932-13145131)
chr8 (15-214)||(24045311-24045511)
chr8 (1-214)||(8049509-8049724)
chr8 (54-212)||(31976122-31976280)
chr8 (18-219)||(44889950-44890150)
chr8 (58-216)||(28190231-28190389)
chr8 (55-216)||(36624810-36624971)
chr8 (54-222)||(43168046-43168214)
chr8 (15-203)||(7079648-7079825)
chr8 (130-218)||(28324221-28324309)
chr8 (19-214)||(10605874-10606068)
chr8 (108-214)||(34390392-34390489)
chr8 (156-214)||(36103250-36103308)
chr8 (156-216)||(30444806-30444866)
chr8 (158-216)||(23011885-23011944)
chr8 (163-216)||(7669132-7669185)
chr8 (60-187)||(8409253-8409390)
chr8 (153-201)||(8469885-8469933)
chr8 (101-151)||(15718590-15718640)
chr8 (158-215)||(26520509-26520565)
chr8 (127-222)||(6460490-6460585)
chr8 (109-216)||(14013269-14013375)
chr8 (144-214)||(15719406-15719476)
chr8 (55-179)||(35404323-35404448)
chr8 (177-216)||(13823458-13823497)
chr8 (109-176)||(26251865-26251932)
chr8 (175-216)||(6421788-6421829)
[»] chr7 (44 HSPs)
chr7 (3-216)||(2411648-2411861)
chr7 (1-218)||(28538675-28538892)
chr7 (1-218)||(35456139-35456356)
chr7 (1-216)||(14602771-14602986)
chr7 (3-216)||(40496055-40496268)
chr7 (1-216)||(39342160-39342375)
chr7 (1-218)||(42816857-42817074)
chr7 (1-218)||(36328326-36328544)
chr7 (3-214)||(9784455-9784667)
chr7 (1-212)||(30080312-30080523)
chr7 (1-218)||(43791358-43791573)
chr7 (1-218)||(23548117-23548335)
chr7 (15-218)||(45984683-45984885)
chr7 (15-218)||(45989043-45989245)
chr7 (1-209)||(30629393-30629602)
chr7 (15-218)||(26416271-26416471)
chr7 (15-220)||(37460466-37460670)
chr7 (1-161)||(40667672-40667831)
chr7 (15-214)||(13814504-13814703)
chr7 (16-218)||(41442601-41442804)
chr7 (16-169)||(19865604-19865758)
chr7 (15-216)||(40495548-40495749)
chr7 (119-210)||(30587436-30587527)
chr7 (1-220)||(14790417-14790621)
chr7 (109-220)||(45181753-45181863)
chr7 (61-219)||(32650918-32651076)
chr7 (1-93)||(22391225-22391317)
chr7 (55-216)||(25188794-25188953)
chr7 (139-214)||(38320751-38320825)
chr7 (101-216)||(46699747-46699862)
chr7 (158-219)||(26161984-26162045)
chr7 (142-218)||(35488688-35488763)
chr7 (108-219)||(3905247-3905348)
chr7 (101-186)||(18926202-18926287)
chr7 (101-169)||(46700599-46700667)
chr7 (101-219)||(764882-765001)
chr7 (156-219)||(6498611-6498674)
chr7 (180-219)||(40667834-40667873)
chr7 (156-216)||(29639063-29639124)
chr7 (139-196)||(45967521-45967578)
chr7 (159-218)||(1580381-1580441)
chr7 (139-218)||(5976117-5976195)
chr7 (108-212)||(15991331-15991434)
chr7 (139-207)||(22391126-22391194)
[»] chr3 (52 HSPs)
chr3 (1-225)||(36397502-36397726)
chr3 (1-220)||(53469947-53470165)
chr3 (1-216)||(671188-671403)
chr3 (1-216)||(35279470-35279685)
chr3 (1-216)||(34088906-34089125)
chr3 (1-216)||(43863486-43863699)
chr3 (1-219)||(48947914-48948134)
chr3 (15-219)||(24241708-24241912)
chr3 (19-216)||(21731271-21731468)
chr3 (1-216)||(7976884-7977100)
chr3 (1-214)||(28181800-28182012)
chr3 (1-225)||(38506475-38506699)
chr3 (15-212)||(34396148-34396345)
chr3 (15-208)||(53129434-53129628)
chr3 (19-216)||(21307111-21307308)
chr3 (15-213)||(48824637-48824834)
chr3 (1-220)||(28092000-28092216)
chr3 (15-220)||(37054743-37054949)
chr3 (15-216)||(42005473-42005675)
chr3 (54-223)||(645728-645896)
chr3 (54-186)||(6836590-6836722)
chr3 (74-216)||(52527417-52527559)
chr3 (54-181)||(46707011-46707139)
chr3 (15-219)||(47767774-47767978)
chr3 (54-217)||(50168190-50168349)
chr3 (15-220)||(30766902-30767106)
chr3 (19-211)||(55460619-55460810)
chr3 (19-216)||(7302744-7302942)
chr3 (17-218)||(44288022-44288223)
chr3 (130-216)||(2105193-2105279)
chr3 (17-207)||(36636174-36636367)
chr3 (61-218)||(31188918-31189074)
chr3 (15-219)||(47283791-47284001)
chr3 (101-217)||(26547412-26547527)
chr3 (156-218)||(19475966-19476028)
chr3 (101-189)||(13339118-13339206)
chr3 (101-212)||(13176195-13176306)
chr3 (156-218)||(8762276-8762338)
chr3 (156-216)||(33871764-33871824)
chr3 (156-216)||(47714426-47714486)
chr3 (54-187)||(44329434-44329566)
chr3 (139-197)||(2733026-2733084)
chr3 (54-210)||(34936450-34936607)
chr3 (15-93)||(46636171-46636249)
chr3 (15-90)||(31022020-31022095)
chr3 (109-213)||(47000170-47000270)
chr3 (108-161)||(15760161-15760214)
chr3 (129-194)||(46636311-46636376)
chr3 (156-225)||(54761417-54761486)
chr3 (101-190)||(45867192-45867281)
chr3 (15-90)||(47337467-47337540)
chr3 (61-93)||(2732951-2732983)
[»] chr4 (42 HSPs)
chr4 (1-219)||(2126171-2126389)
chr4 (1-220)||(35470457-35470676)
chr4 (1-218)||(40547766-40547984)
chr4 (1-219)||(42775777-42775993)
chr4 (1-215)||(27284221-27284435)
chr4 (15-219)||(47108567-47108771)
chr4 (54-216)||(28751744-28751906)
chr4 (55-216)||(41139859-41140020)
chr4 (15-218)||(21782321-21782523)
chr4 (1-215)||(56118170-56118382)
chr4 (1-219)||(26534819-26535038)
chr4 (15-218)||(30303467-30303670)
chr4 (1-213)||(42776418-42776630)
chr4 (18-216)||(46242622-46242819)
chr4 (1-212)||(16299781-16299992)
chr4 (1-214)||(31947906-31948119)
chr4 (19-214)||(46242169-46242362)
chr4 (105-215)||(13318216-13318325)
chr4 (55-216)||(54566561-54566722)
chr4 (15-218)||(16516521-16516718)
chr4 (55-216)||(24705716-24705878)
chr4 (15-216)||(17727759-17727960)
chr4 (15-183)||(4490368-4490535)
chr4 (108-220)||(5579647-5579759)
chr4 (58-186)||(17727436-17727564)
chr4 (58-218)||(19461264-19461425)
chr4 (1-204)||(52294609-52294813)
chr4 (156-216)||(10633181-10633241)
chr4 (156-219)||(31473999-31474062)
chr4 (156-216)||(21012439-21012499)
chr4 (15-219)||(5715986-5716190)
chr4 (58-216)||(9449412-9449568)
chr4 (149-219)||(29091606-29091676)
chr4 (160-221)||(3803718-3803779)
chr4 (168-217)||(41983368-41983417)
chr4 (54-178)||(29685633-29685756)
chr4 (15-218)||(53760322-53760514)
chr4 (112-162)||(31334854-31334904)
chr4 (149-198)||(56339549-56339598)
chr4 (54-178)||(13088352-13088474)
chr4 (19-90)||(56339454-56339525)
chr4 (183-216)||(43955048-43955081)
[»] chr5 (43 HSPs)
chr5 (3-216)||(927637-927850)
chr5 (1-216)||(41761744-41761959)
chr5 (1-219)||(12480235-12480452)
chr5 (15-220)||(17541880-17542084)
chr5 (15-216)||(22304734-22304936)
chr5 (1-214)||(14835126-14835338)
chr5 (54-216)||(32249649-32249811)
chr5 (54-216)||(1209053-1209213)
chr5 (1-212)||(15270421-15270631)
chr5 (60-218)||(33146474-33146632)
chr5 (17-214)||(28489813-28490009)
chr5 (15-225)||(33995435-33995644)
chr5 (129-220)||(22304645-22304736)
chr5 (108-217)||(6771822-6771931)
chr5 (75-215)||(37090995-37091135)
chr5 (108-216)||(28490347-28490456)
chr5 (19-219)||(22303385-22303586)
chr5 (54-217)||(13390961-13391111)
chr5 (15-214)||(10314998-10315196)
chr5 (101-218)||(15579996-15580115)
chr5 (54-217)||(8264833-8264996)
chr5 (55-212)||(37241163-37241324)
chr5 (55-216)||(8255350-8255506)
chr5 (158-219)||(35111702-35111763)
chr5 (101-188)||(30519389-30519475)
chr5 (101-188)||(30559729-30559815)
chr5 (158-216)||(25935151-25935209)
chr5 (20-214)||(17492691-17492884)
chr5 (143-208)||(38178813-38178878)
chr5 (143-208)||(38206037-38206102)
chr5 (156-216)||(12064318-12064378)
chr5 (156-219)||(20320526-20320589)
chr5 (153-216)||(40089412-40089475)
chr5 (1-162)||(9893749-9893914)
chr5 (109-210)||(31368294-31368395)
chr5 (123-210)||(31316579-31316666)
chr5 (156-214)||(19533769-19533827)
chr5 (1-133)||(22302806-22302939)
chr5 (127-216)||(32317134-32317222)
chr5 (156-219)||(37722751-37722814)
chr5 (56-203)||(18442891-18443038)
chr5 (165-218)||(6955020-6955073)
chr5 (15-81)||(40089484-40089550)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-203)||(7486-7688)
[»] chr1 (44 HSPs)
chr1 (3-216)||(946718-946929)
chr1 (1-225)||(15467477-15467701)
chr1 (19-216)||(28632126-28632323)
chr1 (1-203)||(32647626-32647829)
chr1 (1-211)||(41822078-41822288)
chr1 (1-219)||(6470225-6470444)
chr1 (57-219)||(21267343-21267505)
chr1 (1-219)||(35499384-35499601)
chr1 (15-219)||(48953894-48954097)
chr1 (15-219)||(32128431-32128636)
chr1 (15-214)||(44571540-44571738)
chr1 (57-203)||(50472106-50472252)
chr1 (103-216)||(31166647-31166761)
chr1 (1-172)||(41577841-41578021)
chr1 (15-213)||(44571027-44571224)
chr1 (15-219)||(10166843-10167047)
chr1 (15-222)||(39887414-39887621)
chr1 (15-216)||(37446883-37447083)
chr1 (15-216)||(37447426-37447626)
chr1 (19-218)||(41480952-41481152)
chr1 (141-218)||(220627-220704)
chr1 (108-216)||(37036504-37036612)
chr1 (15-218)||(8225119-8225324)
chr1 (61-214)||(23955981-23956136)
chr1 (156-216)||(47541851-47541911)
chr1 (149-216)||(37447971-37448038)
chr1 (158-216)||(12293022-12293080)
chr1 (129-218)||(4663773-4663861)
chr1 (158-219)||(24273081-24273142)
chr1 (123-212)||(32202208-32202297)
chr1 (109-177)||(31195955-31196023)
chr1 (168-218)||(31196903-31196953)
chr1 (139-216)||(41822752-41822829)
chr1 (15-208)||(52134877-52135070)
chr1 (155-211)||(13182107-13182163)
chr1 (156-211)||(26500947-26501002)
chr1 (156-219)||(47165072-47165135)
chr1 (54-216)||(23969439-23969591)
chr1 (110-178)||(14406086-14406154)
chr1 (157-212)||(45358975-45359030)
chr1 (139-185)||(34003858-34003904)
chr1 (181-218)||(32288012-32288049)
chr1 (57-90)||(41822854-41822887)
chr1 (1-46)||(47074272-47074317)
[»] chr6 (19 HSPs)
chr6 (3-216)||(8475466-8475678)
chr6 (54-218)||(1368861-1369027)
chr6 (15-216)||(28918504-28918706)
chr6 (1-217)||(10105342-10105556)
chr6 (58-216)||(15615920-15616077)
chr6 (109-216)||(6357825-6357932)
chr6 (55-219)||(31413248-31413412)
chr6 (123-216)||(724811-724904)
chr6 (129-216)||(1195766-1195853)
chr6 (156-222)||(34244837-34244903)
chr6 (22-214)||(15832962-15833154)
chr6 (156-218)||(13487425-13487487)
chr6 (156-216)||(34364894-34364954)
chr6 (153-216)||(9697874-9697937)
chr6 (112-214)||(26855480-26855578)
chr6 (158-218)||(29889294-29889355)
chr6 (108-212)||(26901343-26901447)
chr6 (15-93)||(1195669-1195746)
chr6 (54-90)||(9697817-9697853)
[»] scaffold0318 (1 HSPs)
scaffold0318 (15-217)||(3205-3407)
[»] scaffold0129 (1 HSPs)
scaffold0129 (15-190)||(19333-19508)
[»] scaffold0169 (1 HSPs)
scaffold0169 (1-216)||(4357-4568)
[»] scaffold0400 (1 HSPs)
scaffold0400 (15-218)||(4018-4222)
[»] scaffold0365 (1 HSPs)
scaffold0365 (15-218)||(4662-4866)
[»] scaffold0417 (1 HSPs)
scaffold0417 (101-213)||(11499-11611)
[»] scaffold0047 (1 HSPs)
scaffold0047 (15-214)||(49838-50037)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-124)||(223398-223518)
[»] scaffold0337 (2 HSPs)
scaffold0337 (101-202)||(15500-15601)
scaffold0337 (15-194)||(15959-16136)
[»] scaffold0065 (2 HSPs)
scaffold0065 (101-202)||(2542-2643)
scaffold0065 (139-194)||(3001-3056)
[»] scaffold0002 (1 HSPs)
scaffold0002 (101-212)||(130682-130793)
[»] scaffold0027 (1 HSPs)
scaffold0027 (156-215)||(11319-11378)


Alignment Details
Target: chr2 (Bit Score: 166; Significance: 9e-89; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 1583547 - 1583312
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||           
T  1583547 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 1583448  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1583447 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaatggaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 1583348  T
Q  201 catccaaacacactcttagaatattcaatgtaattg 236  Q
    |||||||||||||||| |||  ||||| ||||||||    
T  1583347 catccaaacacactctaagagaattcagtgtaattg 1583312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 35047416 - 35047198
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| | ||||||||||||||||||           
T  35047416 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttggcaaaaaatgatgacaatgaattttttt 35047317  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  35047316 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaattaccc 35047217  T
Q  201 catccaaacacactcttag 219  Q
    |||||||||||||||||||    
T  35047216 catccaaacacactcttag 35047198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 44255970 - 44256183
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnat 102  Q
    ||||||||||| |||||||||||||||||||||||||||| |||       ||||||||||||||||||| ||||||||||||||||||||       ||    
T  44255970 aaatttacattttgacccctaatttcaattttcaaatttgacccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttat 44256069  T
Q  103 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44256070 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 44256169  T
Q  203 tccaaacacactct 216  Q
    |||||||| |||||    
T  44256170 tccaaacatactct 44256183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 769366 - 769581
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||           
T  769366 tgaaatttacattttgaccc-taatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 769464  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  769465 tattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 769564  T
Q  200 tcatccaaacacactct 216  Q
    |||||||||||||||||    
T  769565 tcatccaaacacactct 769581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 33189004 - 33188789
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||           
T  33189004 tgaaatttacattttgaccc-taatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 33188906  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33188905 tattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 33188806  T
Q  200 tcatccaaacacactct 216  Q
    |||||||||||||||||    
T  33188805 tcatccaaacacactct 33188789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 11141639 - 11141852
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||           
T  11141639 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 11141738  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  11141739 attacttcatccaaacaaaagaattaagaaatgaaattaatttaatggaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacct 11141838  T
Q  201 catccaaacacact 214  Q
    ||||||||||||||    
T  11141839 catccaaacacact 11141852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 39630561 - 39630775
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnna 101  Q
    ||||||||||| ||||||||||||||||||||  ||||||  ||        ||||||||||||||||||||||||||||||||||||||||       |    
T  39630561 aaatttacattttgacccctaatttcaattttttaatttgatccaaaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaattttttta 39630660  T
Q  102 ttacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctc 201  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  39630661 ttacttcatccaaataaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaattttttaaaatttctcaattacctc 39630760  T
Q  202 atccaaacacactct 216  Q
    |||||||||||||||    
T  39630761 atccaaacacactct 39630775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 3092579 - 3092795
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| |||||||| |||||||| ||           
T  3092579 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaataatgacaattaattttttt 3092678  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     |||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3092679 tattactccatccaaacaaaagtatttagaaataaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacc 3092778  T
Q  200 tcatccaaacacactct 216  Q
    |||||||||||||||||    
T  3092779 tcatccaaacacactct 3092795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 7309598 - 7309436
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    |||||||||||||||||||  |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7309598 ttaaaatttataaaagttgcacaaaaatgatgacaatgaatatttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 7309499  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7309498 tttaaattgcttagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 7309436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 13018095 - 13018297
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||| ||||||||||||||||       |||||| |||||||||||| ||||||||||||||||||||       |||||| |||||||    
T  13018095 tgacccctaatttcatttttcaaatttggcccaaaaa--ttaaaacttataaaagttgcccaaaaatgatgacaatgaatttttttattactccatccaa 13018192  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  13018193 acaaaagaattgagaaatgaaagtaatttaattgaattatttaaattacctagaattttaaattctttataatttctcaattacctcatccaaacacact 13018292  T
Q  215 cttag 219  Q
    |||||    
T  13018293 cttag 13018297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 8736180 - 8735963
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||||| ||||||||||||||||||||||||       ||||||||||||||||||| |||||||||||| |||||||           
T  8736180 tgaaatttacaaattgaccccgaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatggcaatgaaatttttt 8736081  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||| || |||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  8736080 atttctccatccaaacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcttaggattctaaattctttaaaatttcccaattacct 8735981  T
Q  201 catccaaacacactctta 218  Q
    ||||||||||||||||||    
T  8735980 catccaaacacactctta 8735963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 41585393 - 41585194
Alignment:
Q  16 gacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaa 115  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||| |||||||| || ||||||||       |||||||||||||||    
T  41585393 gacccctaatttcaattttcaaatttggcccaaaaaa-ttaaaatttataaaagttgcccaaaaattataacaatgaatttttttattacttcatccaaa 41585295  T
Q  116 caaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 215  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  41585294 caaaataattgagaaatgaaagtaatttaaatgaatcatttaaattgtcaagaattctaaattctttaaaatttatcaattacctcatccaaagacactc 41585195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 28021921 - 28021704
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||  |||||||||||           
T  28021921 tgaaatttacaaattgacccctaatttcaatttccaaatttggcccaaaaaaattaaaatttataaaagttgtccaaaaaaaatgacaatgaaatttttt 28021822  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||| |||||||||| |||| | |||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||    
T  28021821 attactacatccaaacaaaagtattgagaaataaaagcattttaattgaatcatttgaattgtcaagaattctaaattctttaaaatttctcaattagct 28021722  T
Q  201 catccaaacacactctta 218  Q
    ||||||||||||||||||    
T  28021721 catccaaacacactctta 28021704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 19231230 - 19231017
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||| |||||||| |||||||||||||||||||        ||| |||||||||||||| |||||||| | |||||||||           
T  19231230 tgaaatttacaaattgatccctaatt-caattttcaaatttggcccaaaaaaaataatatttataaaagttgcccaaaaattacgacaatgaaatttttt 19231132  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19231131 atttcttcatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattct-aattctttaaaatttctcaattacct 19231033  T
Q  201 catccaaacacactct 216  Q
    ||||||||||||||||    
T  19231032 catccaaacacactct 19231017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 2925002 - 2925200
Alignment:
Q  18 cccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaaca 117  Q
    ||||||||||||||||||||||||| |||       ||||||||||||||||||| ||||||||||||||||||||       |||||| |||| |||||    
T  2925002 cccctaatttcaattttcaaatttgacccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaaatttttgattactccatcaaaaca 2925101  T
Q  118 aaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||| ||||||||||||||  | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  2925102 aaagtattgagaaatgaaaacattttaaatgaatcatttaaattgcctagaattctaaattctttaaaatttcccaattacttcatccaaacacactct 2925200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 54 - 218
Target Start/End: Complemental strand, 14306526 - 14306362
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    ||||||||||||||||||||||||||||||||||| ||||       |||||| |||||||||||||| ||||||||||||||| | |||||||||| ||    
T  14306526 ttaaaatttataaaagttgtccaaaaatgatgacagtgaaattttttattactccatccaaacaaaagtattgagaaatgaaagcattttaattgaacca 14306427  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14306426 ttttaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 14306362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 21504799 - 21505002
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||| |||| ||||||||||||||||||||       ||||||||||||||||||| |||||||| |||| ||||||       | |||| |||||||    
T  21504799 tgacccttaatctcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaat-atgataatgaaattttttactactccatccaa 21504897  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||  ||||||||||| ||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21504898 acaaaattattgagaaatgcaagtaatttaattaaaacatttaaattgcttagaattctaaattctttaaaatttcccaattacctcatccaaacacact 21504997  T
Q  215 cttag 219  Q
     ||||    
T  21504998 tttag 21505002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 17905990 - 17906191
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||||||||||||| ||||||||||||||||       | |||| |||||||||||| ||||||||||||||||||||        |||||| |||| |    
T  17905990 tgacccctaatttcatttttcaaatttggcccaaaaaaat-aaaacttataaaagttgcccaaaaatgatgacaatgaattttttttattactccatcta 17906088  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||| |||| ||||||||||| ||||| |||||||||||||||||||||||    
T  17906089 aacaaaagaattgagaaatgaaagtaatttaattgaattatttaaattatctataattttaaattctttataatttttcaattacctcatccaaacacac 17906188  T
Q  214 tct 216  Q
    |||    
T  17906189 tct 17906191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 44205406 - 44205193
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||||||| ||||||||||| |||||||||||       |||||||||||||||||||||||||||| || ||||||||           
T  44205406 tgaaatttacaaattgaccccttatttcaattttaaaatttggcccaaaaaaattaaaatttataaaagttgtccaaaaataataacaatgaaatttttt 44205307  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||||||||||||||| ||||| |||||||| ||||| |||| |||| | ||||||||| ||| |||||||||||||||||| |||| ||||||||||  |    
T  44205306 attacttcatccaaa-aaaagtattgagaa-tgaaaataatctaatcgtatcatttaagttgtctagaattctaaattcttaaaaaattctcaattatat 44205209  T
Q  201 catccaaacacactct 216  Q
    ||||||||||||||||    
T  44205208 catccaaacacactct 44205193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 32839395 - 32839185
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||| ||||||||||||||||| ||||||||||        |||||||||||||||||| ||||||||||||| ||| ||           
T  32839395 tgaaatttacaaattgatccctaatttcaattttctaatttggcccc-------taaaatttataaaagttgcccaaaaatgatgataat-aaaattttt 32839304  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||  ||||||||||| |  ||| |  |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  32839303 attacaccatccaaacaataatatttatgaatgaaagcaatttaattgaatcatttgaattgcctagaattttaaattctttaaaatttctcaattacct 32839204  T
Q  201 catccaaacacactcttag 219  Q
    |||| ||||||||||||||    
T  32839203 catctaaacacactcttag 32839185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 7167390 - 7167185
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||| ||||||||| ||||||||||||||||       || |||||||||||||||| ||||||||||||||||| ||        |||||| ||||||    
T  7167390 tgacctctaatttcatttttcaaatttggcccaaaaaaattgaaatttataaaagttgcccaaaaatgatgacaataaaatttttttattactccatcca 7167291  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    ||||| |  ||| |  |||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  |||||||||||||    
T  7167290 aacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacac 7167191  T
Q  214 tcttag 219  Q
    | ||||    
T  7167190 ttttag 7167185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 190
Target Start/End: Original strand, 11595195 - 11595328
Alignment:
Q  56 aaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatt 155  Q
    |||| ||||||||||  ||||||| |||||||||||||       | |||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  11595195 aaaaattataaaagtattccaaaa-tgatgacaatgaatttttttaatactccaaccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatt 11595293  T
Q  156 taaattgcctagaattctaaattctttaaaatttc 190  Q
    |||||| | ||||||||||||||||||||||||||    
T  11595294 taaattacttagaattctaaattctttaaaatttc 11595328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 190
Target Start/End: Original strand, 11607097 - 11607230
Alignment:
Q  56 aaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatt 155  Q
    |||| ||||||||||  | |||||||||||||||||||       || ||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  11607097 aaaaattataaaagtattacaaaaatgatgacaatgaattttttaat-actgcaaccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatt 11607195  T
Q  156 taaattgcctagaattctaaattctttaaaatttc 190  Q
    |||||| | ||||||||||||||||||||||||||    
T  11607196 taaattacttagaattctaaattctttaaaatttc 11607230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 19193858 - 19193746
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||  || ||||||||||||||| |||| ||| || ||||||||||  |||||||||    
T  19193858 attactccatccaaacaaaagtattgagaaatgaaagtaatttaatcaaaacatttaaattgcctaaaattttaatttttttaaaattttccaattacct 19193759  T
Q  201 catccaaacacac 213  Q
    |||||||||||||    
T  19193758 catccaaacacac 19193746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 32839916 - 32839714
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||||||||||||| ||||||||||||||||       | ||||||||||||||||| ||||||||||||||||| |         || ||||||||||    
T  32839916 tgacccctaatttcatttttcaaatttggcccaaaaaaat-aaaatttataaaagttgcccaaaaatgatgacaataattttttttcatcacttcatcca 32839818  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    ||||| |  ||| |  ||| |||| |||| ||||||||||||| ||||  |||||||||||||||||| ||||||||||||||||| || ||||||| ||    
T  32839817 aacaataacatttaagaattaaagcaattgaattgaatcatttgaattctctagaattctaaattcttcaaaatttctcaattaccccacccaaacaaac 32839718  T
Q  214 tctt 217  Q
    ||||    
T  32839717 tctt 32839714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 7611621 - 7611421
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattactt----cat 110  Q
    ||||||||||||||| ||||||||||||||||       ||||||||||||||||||| |||||||| ||||||||  |        ||| ||    |||    
T  7611621 tgacccctaatttcatttttcaaatttggcccaaaaaa-ttaaaatttataaaagttgcccaaaaattatgacaat--attttttttttaatttttccat 7611525  T
Q  111 ccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaca 210  Q
    |||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||||||||||  ||||||||||    
T  7611524 ccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattttaaattcttcaaaatttctcaattactccatccaaaca 7611425  T
Q  211 cact 214  Q
    ||||    
T  7611424 cact 7611421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 19072305 - 19072385
Alignment:
Q  141 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaa 221  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  19072305 tttacttgaatcatttaaattacctaggattctaaattctttaaaatttctcaattatctcatccaaacacactctaagaa 19072385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 30698630 - 30698830
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||| | ||||||||||||||||       || ||||||||||||||||   |||||| |||||||| ||       ||||||  ||||||    
T  30698630 tgacccctaattttatttttcaaatttggcccaaaaaatttgaaatttataaaagttgctaaaaaat-atgacaataaatttttttattactctatccaa 30698728  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| |  |||||||| ||||||||| |||||||| |||| |||| |||||||||||||| |||||||||||| |||  ||||||||||||||    
T  30698729 acaataatatttaagaatgaaagcaatttaattaaatcatttgaattacctaaaattctaaattcttcaaaatttctcaaatactccatccaaacacact 30698828  T
Q  215 ct 216  Q
    ||    
T  30698829 ct 30698830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 31704000 - 31703923
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||||| ||||| ||||||||||||||| | ||||||||  |||||||||||| ||||||||||||    
T  31704000 aatttaattgaatcatttgaattgactagaattctaaattatctaaaattttccaattacctcattcaaacacactct 31703923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 31941428 - 31941507
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    ||||||||||||| |||| ||||| ||| |||||||||||||| ||||||| ||||||||||| || |||||||||||||    
T  31941428 aatttaattgaataatttgaattgtctataattctaaattcttgaaaatttatcaattacctcgtcaaaacacactctta 31941507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 30265777 - 30265859
Alignment:
Q  113 aaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaat 195  Q
    ||||||||  ||| |||||||||   ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  30265777 aaacaaaaatatttagaaatgaagacaatttaatttaatcatttgaattgcttagaattctaaattctttaaaatttctcaat 30265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 45094202 - 45094000
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||| | ||||||||||||||||       | ||| ||||||||||||||||||||||||||||||           ||||||||||||||    
T  45094202 tgacccctaattttatttttcaaatttggcccaaaaaaatcaaa-tttataaaagttgtccaaaaatgatgacaaatttttcttttattacttcatccaa 45094104  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| || ||||||||  ||| ||||||||||||| |||| |||||||       ||||| ||||||||| ||||||| ||| ||||||||||    
T  45094103 acaataatatttaggaatgaaagcgattgaattgaatcatttgaattacctagaa-------ttcttcaaaatttcttaattaccccattcaaacacact 45094011  T
Q  215 cttagaatatt 225  Q
    |||||| ||||    
T  45094010 cttagagtatt 45094000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 214
Target Start/End: Complemental strand, 2274467 - 2274312
Alignment:
Q  56 aaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatt 155  Q
    |||| ||||||||||||||  |||||||||||||||||        ||| | ||||||||||| |   ||||||||||||   |||||||||||||||||    
T  2274467 aaaaattataaaagttgtcataaaatgatgacaatgaatttttt--ttagtccatccaaacaagaattttgagaaatgaagtcaatttaattgaatcatt 2274370  T
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||| ||| |||| |||||| ||||||||||| |||||||||  |||||| |||||    
T  2274369 taaattgtctaaaattataaattatttaaaatttc-caattacctagtccaaatacact 2274312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 6749566 - 6749627
Alignment:
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||    
T  6749566 aattccctagaattctaaattcttcaaaatttctcaattaccccatccaaacaagctcttag 6749627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 211
Target Start/End: Complemental strand, 29278742 - 29278591
Alignment:
Q  58 aatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcattta 157  Q
    ||||||| |||| || ||||||||||||||| ||||       | |||| |||||||||||||  ||| ||||  ||||| ||||||||||| ||||||     
T  29278742 aatttatgaaaggtgcccaaaaatgatgacagtgaatttttttactactccatccaaacaaaaatatttagaa--gaaagcaatttaattgattcatttt 29278645  T
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacac 211  Q
    ||||| |||||||||||||||||| | ||    ||||||| |||||||||||||    
T  29278644 aattgtctagaattctaaattcttcacaaaaaatcaattatctcatccaaacac 29278591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 10480269 - 10480329
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||| |||||||||||||||||   ||||||||||||||| ||||||||    
T  10480269 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaagcacactct 10480329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 11794045 - 11794109
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 220  Q
    ||||||| |||||||| |||||||||||||||||   |||||||| |||||||||||||||||||    
T  11794045 taaattgtctagaattttaaattctttaaaattttcaaattacctaatccaaacacactcttaga 11794109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 7684594 - 7684654
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||| ||||| |||| ||||||||||||||||| | |||||||| |||||||||||||||    
T  7684594 taaatggcctaaaattttaaattctttaaaatttttaaattaccttatccaaacacactct 7684654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 11532174 - 11532118
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 212  Q
    |||||||||||||||| |||||||||||||| |||  ||||| ||||||||||||||    
T  11532174 taaattgcctagaattttaaattctttaaaacttccaaattatctcatccaaacaca 11532118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 19072223 - 19072299
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaa 93  Q
    ||||||||||||||||||||||||||||||||       ||| ||||||||||||||  |||||||| |||||||||||    
T  19072223 tgacccctaatttcaattttcaaatttggccc-aaaaaattacaatttataaaagtttcccaaaaat-atgacaatgaa 19072299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 6996420 - 6996371
Alignment:
Q  161 tgcctagaattctaaattctt-taaaatttctcaattacctcatccaaaca 210  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  6996420 tgcctagaattctaaattcttacaaaatttct-aattacctcatccaaaca 6996371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 8736501 - 8736563
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||  ||||||| |||||||||||||||||   ||| |||||||||||| |||||||||    
T  8736501 taaattgggtagaattttaaattctttaaaattttcaaataacctcatccaaatacactctta 8736563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 11799265 - 11799343
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcat-ccaaacacactctta 218  Q
    |||||| |||||||||||||||||  || |||| || ||||| |||||||| |||||||| || | |||||||||||||||    
T  11799265 aatttacttgaatcatttaaattg--taaaattttatattctctaaaatttatcaattacttcgtcccaaacacactctta 11799343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 31220873 - 31220922
Alignment:
Q  168 aattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 220  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  31220873 aattctaaattctctaaaatttc-caatta--tcatccaaacacactcttaga 31220922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 36302516 - 36302410
Alignment:
Q  109 atccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 208  Q
    ||||||||||||  ||| ||||||||| ||| |  |||||||| |||| |||| | || ||||  ||||||| |||||||| |||||||||||||||| |    
T  36302516 atccaaacaaaaacatttagaaatgaatgtactc-aattgaattatttgaattccttaaaatttcaaattctctaaaattt-tcaattacctcatccata 36302419  T
Q  209 cacactctt 217  Q
    || ||||||    
T  36302418 catactctt 36302410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 6e-87; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 44346437 - 44346217
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnn 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||          
T  44346437 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttt 44346338  T
Q  100 nattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44346337 tattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 44346238  T
Q  200 tcatccaaacacactcttaga 220  Q
    |||||||||||||||||||||    
T  44346237 tcatccaaacacactcttaga 44346217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 43185314 - 43185535
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||       ||||||||||||||||||| ||||||||||||||||||||           
T  43185314 tgaaatttacattttgatccctaatttcaattttcaaatttggtccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttcttt 43185413  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43185414 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacct 43185513  T
Q  201 catccaaacacactcttagaat 222  Q
    |||||||||||||||| |||||    
T  43185514 catccaaacacactctaagaat 43185535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 40733850 - 40733641
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||        ||||||||||||||||||| ||||||||||||||||||||           
T  40733850 tgaaatttacattttgacccctaatttcaatttttaaatttggcctaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 40733751  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40733750 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaattacct 40733651  T
Q  201 catccaaaca 210  Q
    ||||||||||    
T  40733650 catccaaaca 40733641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 15 - 218
Target Start/End: Complemental strand, 29257115 - 29256911
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnntt-aaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatcca 113  Q
    ||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||||||||       |||||||||||||    
T  29257115 tgacccctaatttcaattttcaaatttggcccaaaaaaattaaaaatttataaaagttgcccaaaaatgatgacaatgaatatttttattacttcatcca 29257016  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29257015 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcgtccaaacacac 29256916  T
Q  214 tctta 218  Q
    |||||    
T  29256915 tctta 29256911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 14573 - 14787
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||| || |||| ||||||||||||| ||||||           
T  14573 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaatattaaaatttatcaa-gttgcccaaaaatgatgataatgaattttttt 14671  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  14672 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatttcct 14771  T
Q  201 catccaaacacactct 216  Q
    ||||||||||||||||    
T  14772 catccaaacacactct 14787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 33377046 - 33376829
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||           
T  33377046 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 33376947  T
Q  101 --attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 198  Q
      |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  33376946 ttattatttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattacctagaattctaaattctttaaaatttatcaattac 33376847  T
Q  199 ctcatccaaacacactct 216  Q
    ||||||||||||||||||    
T  33376846 ctcatccaaacacactct 33376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 31980262 - 31980047
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnat 102  Q
    ||||||||||| ||||||||||||||||||||||||||||||||       |||||||||||||| |||| ||||||||||||||||||||       ||    
T  31980262 aaatttacattttgacccctaatttcaattttcaaatttggcccaaaaatattaaaatttataaa-gttgcccaaaaatgatgacaatgaatttttttat 31980164  T
Q  103 tacttcatccaaacaaaagaat----tgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 198  Q
    ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31980163 tacttcatccaaacaaaagaatgaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 31980064  T
Q  199 ctcatccaaacacactc 215  Q
    |||||||||||||||||    
T  31980063 ctcatccaaacacactc 31980047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 29482554 - 29482339
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||       ||||||||||||||||||| |||||||| |||||||||||           
T  29482554 tgaaatttacattttgacccctaattttaattttcaaatttggcccaaaaaa-ttaaaatttataaaagttgcccaaaaat-atgacaatgaatttttta 29482457  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  29482456 attagttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaatttcctataattctaaattctttaaaatttctcaattacct 29482357  T
Q  201 catccaaacacactctta 218  Q
    ||||||||||||||||||    
T  29482356 catccaaacacactctta 29482339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 31976881 - 31976666
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnat 102  Q
    ||||||||||| ||||||||||||||||||||||||||||||||       |||||||||||||| ||||  |||||||||||||||||||       ||    
T  31976881 aaatttacattttgacccctaatttcaattttcaaatttggcccaaaaatattaaaatttataaa-gttgctcaaaaatgatgacaatgaatttttttat 31976783  T
Q  103 tacttcatccaaacaaaagaat----tgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 198  Q
    ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31976782 tacttcatccaaacaaaagaatgaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 31976683  T
Q  199 ctcatccaaacacactc 215  Q
    |||||||||| ||||||    
T  31976682 ctcatccaaaaacactc 31976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 1088062 - 1087846
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||        |||| |||||||||||||| |||||||| |||||||| ||           
T  1088062 tgaaatttacattttgacccctaatttcaattttcaaatttggcctaaaaaaattaatatttataaaagttgcccaaaaataatgacaattaattttttt 1087963  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     |||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  1087962 tattactccatccaaacaaaagtatttagaaataaaagtaatttaattgaatcatttaaatttcctaaaattctaaattctttaaaatttctcaattacc 1087863  T
Q  200 tcatccaaacacactct 216  Q
    |||| |||||| |||||    
T  1087862 tcattcaaacatactct 1087846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 33986330 - 33986546
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||| ||| || |||||            
T  33986330 tgaaatttacaaattgacccctaatttcaattttcaaatttgaccgctagaaattaaaatttataaaagttgtccaaaa-tgaggataatgatttttttt 33986428  T
Q  101 --attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 198  Q
      |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  33986429 ttattactccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattccgaattctttaaaatttctcaattac 33986528  T
Q  199 ctcatccaaacacactct 216  Q
    ||||||||||||||||||    
T  33986529 ctcatccaaacacactct 33986546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 29611713 - 29611875
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    ||||||||||| ||||||| ||||||||||||||||||||       ||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  29611713 ttaaaatttatgaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaa---ttgagaaatgaaagtaatttaattgaatca 29611809  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  29611810 tttaaattgcctaaaattctaaattctttaaaattttccaattaccacatccaaacacactcttag 29611875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 26520196 - 26519984
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||  ||||||||||||||||||||||||||||||         ||||||||||||||||||| ||||||||  ||| | ||||           
T  26520196 tgaaatttacatattgacccctaatttcaattttcaaatttggcg-ataaaaattaaaatttataaaagttgcccaaaaatattgatagtgaaatttttt 26520098  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |    
T  26520097 attactccatccaaacaaaagtattgagaaatgaaagtagtttaattgaatcatttaaattgcctagaattttaaattctttaaaatttatcaattactt 26519998  T
Q  201 catccaaacacact 214  Q
     |||||||||||||    
T  26519997 tatccaaacacact 26519984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 215
Target Start/End: Original strand, 10593423 - 10593620
Alignment:
Q  17 acccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatccaaa 115  Q
    |||||||||||||||||| |||||||||||       ||||| ||||||||| ||| ||||||||||||||||||||        |||||| ||||||||    
T  10593423 acccctaatttcaatttttaaatttggcccaaaataattaaa-tttataaaatttgcccaaaaatgatgacaatgaattttttttattactccatccaaa 10593521  T
Q  116 caaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 215  Q
    |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  10593522 caaaagtattaaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaatt-tttaaaatttctcaattacctcatccaaacacactc 10593620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 35978798 - 35978590
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||| |||||||||||||||||||||||||||          ||||||||||||| ||  ||||||||| ||||| ||||           
T  35978798 tgaaatttacaaattgatccctaatttcaattttcaaatttggcca---------aaaatttataaaatttccccaaaaatggtgacattgaaatttttt 35978708  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| || ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||    
T  35978707 attactccacccaaacaaaagtattgagaaatgaaaggaatttaattgaatcatttaaattgactagaattttaaattctttaaaatttctcaattgcct 35978608  T
Q  201 catccaaacacactctta 218  Q
    ||||||||||||||||||    
T  35978607 catccaaacacactctta 35978590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 60 - 218
Target Start/End: Original strand, 34009082 - 34009240
Alignment:
Q  60 tttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaa 159  Q
    ||||||||||||| |||||||||||| |||||||       ||| || |||||||||||||  |||||||||||||||||| |||||||||| |||||||    
T  34009082 tttataaaagttgcccaaaaatgatggcaatgaaattctttatttctccatccaaacaaaaatattgagaaatgaaagtaacttaattgaattatttaaa 34009181  T
Q  160 ttgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34009182 ttgcctaagattctaaattctttgaaatttctcaactacctcatccaaacacactctta 34009240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 9982996 - 9983201
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||| |||||||||||| ||||||||||||       ||||||||||||||||||| ||||||||||||||||||||       |||  | |||||||    
T  9982996 tgacccataatttcaatttccaaatttggcccaaaaacattaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttatttttccatccaa 9983095  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||    ||| | ||||||||  |||| ||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9983096 acaaggatatttaaaaatgaaatcaattcaattgaatcatttgaattgattagaattctaaattcttcaaaatttctcaattacctcatccaaacacact 9983195  T
Q  215 cttaga 220  Q
    ||||||    
T  9983196 cttaga 9983201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 24051619 - 24051825
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||||||||||||| ||||||||||||||||       || |||||||||||||||| ||||||||||||||||| |         |||||| ||||||    
T  24051619 tgacccctaatttcatttttcaaatttggcccaaaaaaattgaaatttataaaagttgcccaaaaatgatgacaataatttttttttattactccatcca 24051718  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    ||||| |  ||| | ||||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  |||||||||||||    
T  24051719 aacaataatatttaaaaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacac 24051818  T
Q  214 tcttaga 220  Q
    |||||||    
T  24051819 tcttaga 24051825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 13144932 - 13145131
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnntt-aaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatcca 113  Q
    |||||||||||||||||||| ||||||||||        || ||||||||||||||||   |||||||||||||| ||||       |||||| || |||    
T  13144932 tgacccctaatttcaatttttaaatttggccaaaaaaaatttaaaatttataaaagtttctcaaaaatgatgacattgaaattttt-attactccaccca 13145030  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    |||||||  |||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| ||||||||||    
T  13145031 aacaaaaatattgagaaataaaaggaatttaattaaatcatttaaattgcctagaattttaaattctttaaattttcccaattacctcacccaaacacac 13145130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 24045311 - 24045511
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||||||||||||| ||||||||||||||||       || |||||||||||||||| ||||||||||||||||| |         |||||| ||||||    
T  24045311 tgacccctaatttcatttttcaaatttggcccaaaaaaattgaaatttataaaagttgcccaaaaatgatgacaataatttttttttattactccatcca 24045410  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    ||||| |  ||| |  |||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  |||||||||||||    
T  24045411 aacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacac 24045510  T
Q  214 t 214  Q
    |    
T  24045511 t 24045511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 8049509 - 8049724
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnn 99  Q
    |||||||||||   |||||||||||||||||||||| |||||||||        |||||||||| ||| |||||||||||||||||||| ||||          
T  8049509 tgaaatttacaaattgacccctaatttcaattttcatatttggcccaaaaataattaaaatttacaaaggttgtccaaaaatgatgacattgaaattttt 8049608  T
Q  100 n-attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 198  Q
      |||||||| |||||||||||| || || ||||||||  | |||||||||||||||| |||| | ||||| ||||||||||||||||  | ||||||||    
T  8049609 ttattacttcgtccaaacaaaagtatagataaatgaaaacattttaattgaatcatttgaattacatagaactctaaattctttaaaaaatttcaattac 8049708  T
Q  199 ctcatccaaacacact 214  Q
    ||||||||||||||||    
T  8049709 ctcatccaaacacact 8049724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 54 - 212
Target Start/End: Complemental strand, 31976280 - 31976122
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    |||||||||||||||||| |||||||| ||||||||| ||       | |||| | |||||||||||| |||||||||| |||| |||||||||||||||    
T  31976280 ttaaaatttataaaagttctccaaaaacgatgacaataaaatttttgactactccgtccaaacaaaagtattgagaaataaaagcaatttaattgaatca 31976181  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 212  Q
    ||| |||| ||||||||||||||||||| |   ||| ||||||||||||||||||||||    
T  31976180 tttgaattacctagaattctaaattcttaattttttttcaattacctcatccaaacaca 31976122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 44889950 - 44890150
Alignment:
Q  18 cccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaaca 117  Q
    |||||||||||| ||||||||||||||||       ||||||||||||||||||| |||  |||||||||||| ||       | |||| ||||||||||    
T  44889950 cccctaatttcatttttcaaatttggcccaaaaaatttaaaatttataaaagttgcccattaatgatgacaat-aatttttttactactccatccaaaca 44890048  T
Q  118 aaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 217  Q
    | |  ||| |  |||||||| ||||||||| ||| |||| |||| |||||||||||||||| || |||||||||||||||||| ||||||||||||||||    
T  44890049 ataatatttaagaatgaaagcaatttaatttaataatttgaattacctagaattctaaatttttcaaaatttctcaattaccttatccaaacacactctt 44890148  T
Q  218 ag 219  Q
    ||    
T  44890149 ag 44890150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 28190389 - 28190231
Alignment:
Q  58 aatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcattta 157  Q
    |||||||||||||||   ||||||||||||||||||       | | ||||||||||||||||  |||||||||| | ||||||||||||||||||||||    
T  28190389 aatttataaaagttgcataaaaatgatgacaatgaaattttttaatgcttcatccaaacaaaaatattgagaaataagagtaatttaattgaatcattta 28190290  T
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||| ||||||||||| |||||| ||||||   ||||| ||||| |||| |||||||    
T  28190289 aattgcgtagaattctaagttctttcaaattttcgaattatctcattcaaatacactct 28190231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 36624971 - 36624810
Alignment:
Q  55 taaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcat 154  Q
    |||||||||||||||||| | ||||||||||||||| |        |||||||||||||||||| |  ||| |  |||||||| |||| |||||||||||    
T  36624971 taaaatttataaaagttgcctaaaaatgatgacaataatattttttattacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcat 36624872  T
Q  155 ttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    || |||| | ||||||||||||||||| ||||||||||||||| | |||| |||||||||||    
T  36624871 ttgaattccttagaattctaaattcttcaaaatttctcaattatcccatctaaacacactct 36624810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 43168046 - 43168214
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    |||||||||||||||||||  ||||||  |||||||||||        ||| |||||| ||||||||| ||| |||||||||| |||||||||| ||| |    
T  43168046 ttaaaatttataaaagttgctcaaaaacaatgacaatgaattatttttttatttcatcaaaacaaaagtattaagaaatgaaaataatttaattaaatta 43168145  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 222  Q
    ||||||||| |||||||||||||||||||||||    ||||||  |||||||||||||| ||| |||||    
T  43168146 tttaaattgtctagaattctaaattctttaaaaaaattcaattgactcatccaaacacattctaagaat 43168214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 7079648 - 7079825
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||||||||||||||||| |||| ||||||        |||||||||||||||||| ||||||||||||||||||||       ||||||  ||||||    
T  7079648 tgacccctaatttcaatttttaaatgtggcccaaaaaa--taaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattactctatccaa 7079745  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcat 203  Q
    ||||||| ||||||||||||||| | |         ||| || |||| ||||||||| |||||||||||||||||||||||||||||||    
T  7079746 acaaaagtattgagaaatgaaagcatt---------tcaatttaattacctagaattttaaattctttaaaatttctcaattacctcat 7079825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 28324309 - 28324221
Alignment:
Q  130 aatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||  |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  ||||||||||||||||||    
T  28324309 aatgaaaacaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactctta 28324221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 10605874 - 10606068
Alignment:
Q  19 ccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaa 118  Q
    |||||||||||||||||||||||||||        || |||||||||||||||| |||||||||| ||||||||        |||| ||||| ||||||     
T  10605874 ccctaatttcaattttcaaatttggccaaaaataattgaaatttataaaagttgaccaaaaatgacgacaatga-tttttttattatttcatgcaaacac 10605972  T
Q  119 aagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
     |  ||| | |||| || |||||||||||||||||||| ||||| ||| |||||||||||||| ||||    | ||||||||||||||||||||||    
T  10605973 gaatatttaaaaattaaggtaatttaattgaatcatttgaattgactaaaattctaaattcttcaaaaaaaattaattacctcatccaaacacact 10606068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 34390392 - 34390489
Alignment:
Q  108 catccaaacaaaagaattgagaaatgaaagtaatttaattgaatca-tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatcca 206  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||| |||||||| |||||||||||          |||||||||||||||||||||||    
T  34390392 catcaaaacaaaagtattgagaaataaaagtaatttaattgaatcattttaaatttcctagaattct----------aaatttctcaattacctcatcca 34390481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 36103250 - 36103308
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  36103250 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacact 36103308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 30444866 - 30444806
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||    
T  30444866 taaattgcctagaattttaaattctttaaaatttccaaattacttcatccaaacacactct 30444806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 23011885 - 23011944
Alignment:
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatcc-aaacacactct 216  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  23011885 aattgcctagaattttaaattctttaaaatttctaaattacctcatccaaaacacactct 23011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 7669132 - 7669185
Alignment:
Q  163 cctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  7669132 cctagagttctaaattctttgaaatttctcaattaccccatccaaacacactct 7669185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 8409390 - 8409253
Alignment:
Q  60 tttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaa----------agaattgagaaatgaaagtaatttaattga 149  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||| ||| |||          ||  ||||||||| |||| ||||||||| |    
T  8409390 tttataaaagttgtccaaaaatgatgacaatgaatttttttattacttcatctaaataaatcgaaataaaagtgttgagaaataaaagcaatttaattaa 8409291  T
Q  150 atcatttaaattgcctagaattctaaattctttaaaat 187  Q
    |||||||| |||| |||||||||||| |||||||||||    
T  8409290 atcatttagattgtctagaattctaatttctttaaaat 8409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 8469885 - 8469933
Alignment:
Q  153 atttaaattgcctagaattctaaattctttaaaatttctcaattacctc 201  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||    
T  8469885 atttgaattacctagaattctaaattctttaaaatttctcaattacctc 8469933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 15718590 - 15718640
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaat 151  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||||||||    
T  15718590 attactccatccaaacaaaagtattgagaaatgaaagtaattaaattgaat 15718640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 26520565 - 26520509
Alignment:
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 215  Q
    |||| ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  26520565 aattccctagaattctaaat-cttcaaaatttctcaattaccccatccaaacacactc 26520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 6460585 - 6460490
Alignment:
Q  127 agaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 222  Q
    ||||||||| |  |||| |||||||||||| |||| |||| |||| |||||||| | |||||| | ||||  |||||| |||||||||||||||||    
T  6460585 agaaatgaaggatatttgattgaatcatttgaatttcctaaaattttaaattctattaaattttttaattgtctcatcaaaacacactcttagaat 6460490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 14013375 - 14013269
Alignment:
Q  109 atccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 208  Q
    |||||||||| |  ||| ||||||||| | |||||||| ||||| |||| ||||||||||||||||||||| | |||||||   ||||| ||| ||||||    
T  14013375 atccaaacaataagatttagaaatgaaggcaatttaat-gaatcttttatattgcctagaattctaaattcatcaaaattttctaattaactcgtccaaa 14013277  T
Q  209 cacactct 216  Q
     |||||||    
T  14013276 tacactct 14013269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 15719406 - 15719476
Alignment:
Q  144 aattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||||  ||| ||||||||| |||| |||||| |||||||||||||||||||||  | ||||||||||    
T  15719406 aattgaatagtttgaattgcctaaaattttaaattttttaaaatttctcaattaccttgttcaaacacact 15719476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 35404448 - 35404323
Alignment:
Q  55 taaaatttataaaagttgtccaaaaatgatgacaatgaa-nnnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    |||||||||||||| ||| ||||||||||||||||||||        ||||||  |||||||||| |  ||| | ||||||||  ||||||||||||| |    
T  35404448 taaaatttataaaaattgcccaaaaatgatgacaatgaattttttttattactgtatccaaacaataatatttaaaaatgaaatcaatttaattgaatga 35404349  T
Q  154 tttaaattgcctagaattctaaattc 179  Q
    ||| |||| |||| ||||| ||||||    
T  35404348 tttgaattacctaaaattcaaaattc 35404323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 13823458 - 13823497
Alignment:
Q  177 ttctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  13823458 ttcttcaaaatttctcaattacttcatccaaacacactct 13823497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 26251932 - 26251865
Alignment:
Q  109 atccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaa 176  Q
    ||||||||||||  ||| ||||||||||  |||| ||| ||||||||| |||||||| ||||||||||    
T  26251932 atccaaacaaaaacatttagaaatgaaataaattcaatcgaatcatttgaattgcctcgaattctaaa 26251865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 6421788 - 6421829
Alignment:
Q  175 aattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||||| ||||||||||| ||||| |||||    
T  6421788 aattctttaaaatttctcgattacctcatctaaacaaactct 6421829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 3e-85; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 2411648 - 2411861
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnat 102  Q
    ||||||||||| |||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||||||||       ||    
T  2411648 aaatttacattttgacccctaatttcaattttcaaatttgacccaaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttat 2411747  T
Q  103 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2411748 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 2411847  T
Q  203 tccaaacacactct 216  Q
    ||||||||| ||||    
T  2411848 tccaaacactctct 2411861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 28538892 - 28538675
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| || ||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||           
T  28538892 tgaaatttacattttgccccctaatttcaattttcaaatttggcctaaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaattttttt 28538793  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28538792 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttctcaattacct 28538693  T
Q  201 catccaaacacactctta 218  Q
    ||||||||||||||||||    
T  28538692 catccaaacacactctta 28538675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 35456139 - 35456356
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||           
T  35456139 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatattttt 35456238  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||    
T  35456239 attactccatccaaacaaaagaattgagaaatgaaagtaatttaattgaattatttaaattgcctagaattctaaattctttaaaaattttcaattacct 35456338  T
Q  201 catccaaacacactctta 218  Q
    ||||||||||||||||||    
T  35456339 catccaaacacactctta 35456356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 14602986 - 14602771
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| |||||||||||||| |||||           
T  14602986 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgactatgaatattttt 14602887  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14602886 attactccatccaaacaaaagaattgagaaatgaaagtaatttaattgaattatttaaattgcctagaattctaaattctttaaaatttttcaattacct 14602787  T
Q  201 catccaaacacactct 216  Q
    ||||||||||||||||    
T  14602786 catccaaacacactct 14602771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 40496055 - 40496268
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnat 102  Q
    ||||||||||| |||||||||||||||||||||||||||| |||       |||||||||||||||||| |||||||||||||||||||||       ||    
T  40496055 aaatttacattttgacccctaatttcaattttcaaatttgacccaaaaaaattaaaatttataaaagttctccaaaaatgatgacaatgaatttttttat 40496154  T
Q  103 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  40496155 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattataaattctttaaaatttcttaattacctca 40496254  T
Q  203 tccaaacacactct 216  Q
    |||||||| |||||    
T  40496255 tccaaacatactct 40496268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 39342375 - 39342160
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| |||||||| |||||||||||           
T  39342375 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaat-atgacaatgaattttttt 39342277  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39342276 tattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 39342177  T
Q  200 tcatccaaacacactct 216  Q
    |||||||||||||||||    
T  39342176 tcatccaaacacactct 39342160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 42816857 - 42817074
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||        |||||||||||||||||||  |||||||||||||||||||           
T  42816857 tgaaatttatattttgacccctaatttcaattttcaaatttggcctaaaaaaattaaaatttataaaagttgctcaaaaatgatgacaatgaatttttgt 42816956  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42816957 attactttatccaaacaaaagaattgagaaatgaaagtaattcaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 42817056  T
Q  201 catccaaacacactctta 218  Q
    ||||| ||||||||||||    
T  42817057 catcctaacacactctta 42817074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 36328544 - 36328326
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnn 99  Q
    |||||||||||   ||| ||||||||| |||||||||||||| |||        ||||||||||||||||||||||||||||||||  ||||||          
T  36328544 tgaaatttacaaattgatccctaattttaattttcaaatttgaccccctaaaaattaaaatttataaaagttgtccaaaaatgatggtaatgaaattttt 36328445  T
Q  100 nattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36328444 aattactccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattttttaaaatttctcaattacc 36328345  T
Q  200 tcatccaaacacactctta 218  Q
    |||||||||||||||||||    
T  36328344 tcatccaaacacactctta 36328326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 9784667 - 9784455
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnat 102  Q
    ||||||||||| |||||||||||||||||||| |||||||||||       ||||||||||||||||||| |||||||| |||||||||||       ||    
T  9784667 aaatttacattttgacccctaatttcaatttttaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaattatgacaatgaatttttttat 9784568  T
Q  103 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattc-tttaaaatttctcaattacctc 201  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||| ||    
T  9784567 tacttcatccaaacaaaagaattgagaaataaaagtaatttaattgaatcatctaaattgcctaaaattttaaattcttttaaaatttctcaattacttc 9784468  T
Q  202 atccaaacacact 214  Q
     ||||||||||||    
T  9784467 gtccaaacacact 9784455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 30080523 - 30080312
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||| ||||||||||||||| |||||||||||       ||||||||||||||||||  ||||||||||| ||||||||           
T  30080523 tgaaatttacaaattgactcctaatttcaattttaaaatttggcccaaaaaaattaaaatttataaaagtttcccaaaaatgataacaatgaaatttttt 30080424  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  30080423 attactccatccaaacaaaagtattgagaaataaaagtaatttaattgaatcatttaaattgcttagaattctaaattcttcaaaatttctcaattacct 30080324  T
Q  201 catccaaacaca 212  Q
    |||| |||||||    
T  30080323 catcaaaacaca 30080312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 43791358 - 43791573
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||||||||||||||||||  |||| |||||       ||||||| ||||||||||| | ||||||||||||||||||           
T  43791358 tgaaatttacaaattgacccctaatttcaatttttcaattcggcccaaaaaaattaaaatatataaaagttgccaaaaaatgatgacaatgaaacttt-- 43791455  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||    
T  43791456 attactccatccaaacaaaagtattgagaaatgaaaataatttaattgaatcatttaaattgccaagaattctaaattctttaaaattttccaattacct 43791555  T
Q  201 catccaaacacactctta 218  Q
    ||||||||||||||||||    
T  43791556 catccaaacacactctta 43791573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 23548335 - 23548117
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||| |||||||||| |||||||||||| ||       ||||||||| | ||||||| |||||||| |||||||| ||           
T  23548335 tgaaatttacattttgacctctaatttcaactttcaaatttgggccaaaaaa-ttaaaattttttaaagttgcccaaaaataatgacaattaattttttt 23548237  T
Q  101 --attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 198  Q
      |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23548236 ttattactccatccaaacaaaagtatttagaaatgaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattac 23548137  T
Q  199 ctcatccaaacacactctta 218  Q
    ||||||||||||||||||||    
T  23548136 ctcatccaaacacactctta 23548117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 45984683 - 45984885
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||| ||||| ||||||||||||||||||       ||||| |||||||||||||||||||||| ||||| || ||       |||||| | |||||    
T  45984683 tgaccccaaattttaattttcaaatttggccccaaaaaattaaa-tttataaaagttgtccaaaaataatgactataaatttttttattactccgtccaa 45984781  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  45984782 acaaaagtattaagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctctattaccccatccaaacacact 45984881  T
Q  215 ctta 218  Q
    ||||    
T  45984882 ctta 45984885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 45989043 - 45989245
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||| ||||| ||||||||||||||||||       ||||| |||||||||||||||||||||| ||||| || ||       |||||| | |||||    
T  45989043 tgaccccaaattttaattttcaaatttggccccaaaaaattaaa-tttataaaagttgtccaaaaataatgactataaatttttttattactccgtccaa 45989141  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  45989142 acaaaagtattaagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctctattaccccatccaaacacact 45989241  T
Q  215 ctta 218  Q
    ||||    
T  45989242 ctta 45989245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 30629393 - 30629602
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||           
T  30629393 tgaaatttacattttgacccataatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 30629492  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| |  ||||    |||||||||    
T  30629493 tattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctaaaattttaaattttaaaaaaaaaatcaattacc 30629592  T
Q  200 tcatccaaac 209  Q
    ||||||||||    
T  30629593 tcatccaaac 30629602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 26416271 - 26416471
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||||||||||| ||||||||       ||||| ||||||||||||| |||||||| |||| ||||||       ||||||||||||||    
T  26416271 tgacccctaatttcaattttcaattttggccccaaaaaattaaa-tttataaaagttgcccaaaaat-atgaaaatgaaattttttattacttcatccaa 26416368  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||| ||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  26416369 acaaaagtattaaaaaatgaaagtaatttaattgaattatttagattgcctagaattctaaattcttcaaaatttctcaattacctcat-caaacacact 26416467  T
Q  215 ctta 218  Q
    ||||    
T  26416468 ctta 26416471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 15 - 220
Target Start/End: Complemental strand, 37460670 - 37460466
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||       |||| | |||||||    
T  37460670 tgacccctaatttcaattttcaaatttggcccaaaaaa-ttaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttattattccatccaa 37460572  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||| |||||||||| |||| | ||| ||||||| |||| ||||| |||||||| |||||||||||||| || |||||||||||||||||| |||||    
T  37460571 acaaaagtattgagaaattaaagcatttttattgaattatttgaattgtctagaattttaaattctttaaaaattttcaattacctcatccaaatacact 37460472  T
Q  215 cttaga 220  Q
    ||||||    
T  37460471 cttaga 37460466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 40667672 - 40667831
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||       || ||||| |||||||||| ||||||||||||||||||||           
T  40667672 tgaaatttgcattttgacccctaatttcaattttcaaatttggcccaaaaaaatttaaattaataaaagttgcccaaaaatgatgacaatgaattttttt 40667771  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaatt 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40667772 attacttcatccaaacaaaagaattgagaaatgaaa-taatttaattgaatcatttaaatt 40667831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 13814703 - 13814504
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||| ||||||||||||||||        ||||||||||||||||||||||| |||||||||||| |        ||||||||||||||    
T  13814703 tgacccctaatttcatttttcaaatttggcccaaaaaaaataaaatttataaaagttgtccaataatgatgacaataactttttttattacttcatccaa 13814604  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| |  |||||||| |||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||  || ||||||||||    
T  13814603 acaataacatttaagaatgaaagcaattgaattgaatcatttgaattccctagaattctaaattcttcaaaatttctcaattaccctattcaaacacact 13814504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 41442804 - 41442601
Alignment:
Q  16 gacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatga-annnnnnnattacttcatccaa 114  Q
    |||||||||||||| ||||||||||||||||       || |||||||||||||||  |||| |||||||||||| | |       |||||| |||||||    
T  41442804 gacccctaatttcatttttcaaatttggccccaaaaaattgaaatttataaaagttacccaataatgatgacaataatatttttttattactccatccaa 41442705  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| || |||||| | |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  41442704 acaataatatttaggaatgaaggcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaattacccaatccaaacacact 41442605  T
Q  215 ctta 218  Q
    ||||    
T  41442604 ctta 41442601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 19865758 - 19865604
Alignment:
Q  16 gacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||  |||||||||||||||||||       ||||||  ||||||    
T  19865758 gacccctaatttcaattttcaaatttggccccaaaaaaattaaaatttataaaagttgctcaaaaatgatgacaatgaaattttttattactcaatccaa 19865659  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaa 169  Q
    ||||||| || ||||||||||| |||||||||||||||||||||||| |||||||    
T  19865658 acaaaagtatcgagaaatgaaattaatttaattgaatcatttaaattacctagaa 19865604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 40495548 - 40495749
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||||||||||||| |||||||||||| |||       ||||||||||||||||||| |||||||| |||||||| |         |||||||||||||    
T  40495548 tgacccctaatttcatttttcaaatttgacccaaaaaaattaaaatttataaaagttgcccaaaaat-atgacaataatttttttttattacttcatcca 40495646  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    ||||| |  ||| |  |||||||  |||| ||||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  40495647 aacaataacatttaagaatgaaaacaattgaattgaatcatttgaattccctataattctaaattcttcaaaatttctcaattacctcatccaaacacac 40495746  T
Q  214 tct 216  Q
    |||    
T  40495747 tct 40495749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 30587527 - 30587436
Alignment:
Q  119 aagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaca 210  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||    
T  30587527 aagaattgagaaatgaaagtaatttaattgaatcttttaaattgcctagaattctaaattctctaaaattttccaattacctcgtccaaaca 30587436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 14790417 - 14790621
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||||||||||||||||||||||||||||||       ||||||||||||||||||| |||||||||||| |||||||           
T  14790417 tgaaatttacaaattgacccctaatttcaattttcaaatttggcccaaaaaa-ttaaaatttataaaagttgcccaaaaatgatggcaatgaattttttt 14790515  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
     || || |||||||||||||  |||||||||| ||||||||||             ||||||||||| |||||||||||||||||||||  |||||||||    
T  14790516 ttt-ctccatccaaacaaaaatattgagaaattaaagtaattt-------------aaattgcctaggattctaaattctttaaaattttccaattacct 14790601  T
Q  201 catccaaacacactcttaga 220  Q
    ||||||||||||||||||||    
T  14790602 catccaaacacactcttaga 14790621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 45181863 - 45181753
Alignment:
Q  109 atccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 208  Q
    ||||||||||||  ||| ||||||||| | || |||||||||| |||| ||||||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  45181863 atccaaacaaaaagatttagaaatgaaggcaaattaattgaataatttcaattgcctagaattctaaactctctaaaattt-tcaattacctcatccaaa 45181765  T
Q  209 cacactcttaga 220  Q
    ||||||||||||    
T  45181764 cacactcttaga 45181753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 32650918 - 32651076
Alignment:
Q  61 ttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaag-taatttaattgaatcatttaaa 159  Q
    |||||||| ||| |||||||| |||||||||||       |||||  |||||||||||| | ||||| ||| ||||| ||||||||||  ||||||||||    
T  32650918 ttataaaatttgcccaaaaat-atgacaatgaaattttttattacaccatccaaacaaaggtattgaaaaacgaaaggtaatttaattacatcatttaaa 32651016  T
Q  160 ttgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||||||| ||||| |||||||||| ||||| |||||||||||||||||| |||||||||    
T  32651017 ttgcctaggattctgaattctttaagatttcccaattacctcatccaaactcactcttag 32651076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22391317 - 22391225
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaa 93  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||       ||||| |||||||||||||| ||||||||||| |||||||    
T  22391317 tgaaatttacatattgacccctaatttcaattttcaaatttggcccaaaaaaattaaagtttataaaagttgttcaaaaatgatggcaatgaa 22391225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 25188953 - 25188794
Alignment:
Q  55 taaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcat 154  Q
    ||||||||| |||||||| | ||||||||||||||||||       |||||| |||||||||||||  ||| | |||| || | ||||||||||| ||||    
T  25188953 taaaatttacaaaagttgccaaaaaatgatgacaatgaaatttt--attactccatccaaacaaaaatatttaaaaattaaggcaatttaattgagtcat 25188856  T
Q  155 ttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||| ||||||||||||||| || ||||    ||||||||| |||||||| |||||||    
T  25188855 ttaaattgtctagaattctaaattattcaaaaaaattcaattaccacatccaaatacactct 25188794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 38320751 - 38320825
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  38320751 aatttaattgtatcatttgaattgcctagaattttaaattctttaaaattt-tcaattaccacatccaaacacact 38320825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 46699862 - 46699747
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| ||||||||||| |  ||| ||||||||| ||||||||||||||| |||| |||||| || |||||||||||||| |||||||||||| || |     
T  46699862 attactccatccaaacaataatatttagaaatgaaggtaatttaattgaataatttgaattgcataaaattctaaattcttcaaaatttctcaactatcc 46699763  T
Q  201 catccaaacacactct 216  Q
    | || |||||||||||    
T  46699762 cgtctaaacacactct 46699747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 26162045 - 26161984
Alignment:
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  26162045 aattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttag 26161984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 35488688 - 35488763
Alignment:
Q  142 ttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    ||||||||||||||||||| | ||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  35488688 ttaattgaatcatttaaataggctaaaattttaaattctttaaaattt-tcaattacatcatccaaacacactctta 35488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 3905348 - 3905247
Alignment:
Q  108 catccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaa 207  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||         |||||| || |||||||||||||||||||||||||||||||| ||||    
T  3905348 catccaaacaaaagtattgggaaatgaaagtaattaaattgaat---------tgcctataaatctaaattctttaaaatttctcaattacctcaaccaa 3905258  T
Q  208 acacactcttag 219  Q
    | ||||||||||    
T  3905257 a-acactcttag 3905247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 18926287 - 18926202
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaa 186  Q
    |||||||||||||| |||||  | ||  |||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  18926287 attacttcatccaagcaaaaataatgtaaaataaaagtaatttaattgaatcatttaaattggctataattcaaaattctttaaaa 18926202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 46700599 - 46700667
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaa 169  Q
    |||||| || ||||||||||| ||||| ||||||||  |||||||||||||||||||||||||||||||    
T  46700599 attactccacccaaacaaaagtattgaaaaatgaaataaatttaattgaatcatttaaattgcctagaa 46700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 764882 - 765001
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctt-taaaatttctcaattacc 199  Q
    ||||||| ||||||||||||  ||| |||||| |||||||||||||||||| |||| |||||||   ||||||||  ||||  ||||  | ||||||| |    
T  764882 attactttatccaaacaaaaatatttagaaattaaagtaatttaattgaataatttgaattgcccgtaattctaatatcttgaaaaaaatttcaattatc 764981  T
Q  200 tcatccaaacacactcttag 219  Q
     |||||||||||||||||||    
T  764982 ccatccaaacacactcttag 765001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 6498674 - 6498611
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||||||||||||||| ||||   |||||||||||  |||||||||||||||||||||||||||    
T  6498674 taaattgcctagaattttaaagaatttaaaatttccaaattacctcatccaaacacactcttag 6498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 40667834 - 40667873
Alignment:
Q  180 tttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40667834 tttaaaatttctcaattacctcatccaaacacactcttag 40667873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 29639124 - 29639063
Alignment:
Q  156 taaattgcctagaattctaaa-ttctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||||||||||||||  ||| |||||||||||||   ||||||||||||||||||||||||    
T  29639124 taaattgcctagaatttaaaaattctttaaaattttcaaattacctcatccaaacacactct 29639063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 45967521 - 45967578
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatt 196  Q
    ||||||||| ||| ||||||||||| || |||| ||||||||||||||||| ||||||    
T  45967521 aatttaattaaattatttaaattgcttaaaattttaaattctttaaaatttgtcaatt 45967578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 1580381 - 1580441
Alignment:
Q  159 attgcctagaattctaaattctttaaaatttctcaattacctcatccaa-acacactctta 218  Q
    |||||||| |||| ||||||||||||||  | ||||||||||||||||| |||||||||||    
T  1580381 attgcctaaaattttaaattctttaaaaaatttcaattacctcatccaacacacactctta 1580441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 5976195 - 5976117
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||||||||||||||||||  |||| || | |||||||||||||| | ||||||| |||| | ||| |||||||||    
T  5976195 aatttaattgaatcatttaaattatctag-atccaaaattctttaaaatgtatcaattatctcacctaaaaacactctta 5976117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 15991331 - 15991434
Alignment:
Q  108 catccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaa 207  Q
    ||||||||||||| | || | ||||||||  ||||||||| ||| |||| ||||| ||| |||||||||||||| ||||    ||| |||||| ||||||    
T  15991331 catccaaacaaaatatttaa-aaatgaaaacaatttaattaaattatttgaattgtctaaaattctaaattcttgaaaaaaattcagttaccttatccaa 15991429  T
Q  208 acaca 212  Q
    |||||    
T  15991430 acaca 15991434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 22391126 - 22391194
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaa 207  Q
    ||||||||||| |||||||||||| ||| ||||||||||| || ||||    ||||||||| |||||||    
T  22391126 aatttaattgagtcatttaaattgtctaaaattctaaattattcaaaaaaattcaattaccacatccaa 22391194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 36397726 - 36397502
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||           
T  36397726 tgaaatttacattttgacccctaatttcaattttcaaatttggcctaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 36397627  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36397626 attacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacct 36397527  T
Q  201 catccaaacacactcttagaatatt 225  Q
    ||||||||||||||||||| |||||    
T  36397526 catccaaacacactcttaggatatt 36397502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 53470165 - 53469947
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||           
T  53470165 tgaaatttacattttgacctctaatttcaattttcaaatttggcccaaaaaa-ttaaaatttataaaagttgcccaaaaatgatgacaatgaatttttta 53470067  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  53470066 attagttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattacctagaattctaaattctttaaaatttctcaattacct 53469967  T
Q  201 catccaaacacactcttaga 220  Q
    ||||||||||||||||||||    
T  53469966 catccaaacacactcttaga 53469947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 671403 - 671188
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||           
T  671403 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaaataaaatttataaaagttgtccaaaaatgatgacaatgaattttttt 671304  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||||||||    
T  671303 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgtctataattttatattctttaaaatttctcaattacct 671204  T
Q  201 catccaaacacactct 216  Q
    ||||||||||||||||    
T  671203 catccaaacacactct 671188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 35279685 - 35279470
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||| | | |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||           
T  35279685 tgaaatttaaaatttgacccctaatttcaattttcaaatttggccgaaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaattttttt 35279586  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| |||    
T  35279585 attacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaatcatttaaattacttagaattctaaattctttaaaatttcccaattgcct 35279486  T
Q  201 catccaaacacactct 216  Q
    ||||||||||||||||    
T  35279485 catccaaacacactct 35279470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 34088906 - 34089125
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       |||| |||||||||||||| |||||||||||||||||||            
T  34088906 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaatttaatatttataaaagttgcccaaaaatgatgacaatgatttttttt 34089005  T
Q  101 ----attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatt 196  Q
        |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34089006 ttttattacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatt 34089105  T
Q  197 acctcatccaaacacactct 216  Q
    || |||||||||||||||||    
T  34089106 acatcatccaaacacactct 34089125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 43863699 - 43863486
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||| ||           
T  43863699 tgaaatttacattttgacccctaatttcaattttcaaatttggca-aaaaaaattaaaatttataaaagttgcccaaaaatgatgacaataaattttttt 43863601  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43863600 attactt-atccaaacaaaagaattgagaaatgaaaataatttaattgaatcatttaaattacctagaattctaaattctttaaaatttctcaattacct 43863502  T
Q  201 catccaaacacactct 216  Q
    | ||||||||||||||    
T  43863501 cgtccaaacacactct 43863486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 48947914 - 48948134
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||| || |||| ||||||||||||||||||||||| |||       ||||||||||||||||||| | ||||||||||||| ||||           
T  48947914 tgaaatttaccttttgactcctaatttcaattttcaaatttgacccaaaaaaattaaaatttataaaagttgcctaaaaatgatgacagtgaattttttt 48948013  T
Q  101 --attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 198  Q
      |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48948014 ttattatttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttttcaattac 48948113  T
Q  199 ctcatccaaacacactcttag 219  Q
    |||||||||||| ||||||||    
T  48948114 ctcatccaaacatactcttag 48948134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 24241912 - 24241708
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||  ||||||||||| |||||||       ||| || |||||||    
T  24241912 tgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgctcaaaaatgatgccaatgaaattttttatttctccatccaa 24241813  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24241812 acaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacact 24241713  T
Q  215 cttag 219  Q
    |||||    
T  24241712 cttag 24241708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 21731271 - 21731468
Alignment:
Q  19 ccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaa 118  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||||||       ||||||  ||||||||||    
T  21731271 ccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgttcaaaaatgatgacaatgaattttattattactctatccaaacaa 21731370  T
Q  119 aagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    || |||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||    
T  21731371 aaaaattgaaaaataaaagtaatttaattgaattatttaaattgcctagaattttaaattctcttaaatttatcaattacctcatccaaacacactct 21731468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 7976884 - 7977100
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||| ||||||||||||||||||||||||||||       | ||||||||||||||||| |||||||||||| |||||||           
T  7976884 tgaaatttacaaattgatccctaatttcaattttcaaatttggcccaaaaaaatcaaaatttataaaagttgcccaaaaatgatggcaatgaaatttttt 7976983  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     ||| || |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  7976984 tatttctccatccaaacaaaaatattgagaaatgaaagtaattgaattgaatcatttaaattgcctaggattcgaaattctttaaaatttcccaattacc 7977083  T
Q  200 tcatccaaacacactct 216  Q
    |||||||||||||||||    
T  7977084 tcatccaaacacactct 7977100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 28182012 - 28181800
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||||| ||||||||||||| |||||||||||       |||||| |||||||||||| |||||| |||||||||| |            
T  28182012 tgaaatttacaaattgacccttaatttcaatttttaaatttggcccaaaaaa-ttaaaacttataaaagttgcccaaaattgatgacaataatttttctt 28181914  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  28181913 attactccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttccaattacct 28181814  T
Q  201 catccaaacacact 214  Q
    | ||||||||||||    
T  28181813 cgtccaaacacact 28181800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 38506699 - 38506475
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   || ||||||||||||||||| ||||||| |||       ||||||||||||||||||| ||||||||||||| || |||           
T  38506699 tgaaatttacaaattgccccctaatttcaatttttaaatttgacccaaaaaaattaaaatttataaaagttgcccaaaaatgatgataaagaaatttttg 38506600  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||||||| ||||||||||||| ||||||||||||||  | ||||| |||||||||||||||||||| ||||||||||||||||||||||  ||||||| |    
T  38506599 attactttatccaaacaaaagtattgagaaatgaaaacattttaaatgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattactt 38506500  T
Q  201 catccaaacacactcttagaatatt 225  Q
    ||| |||||||||||| ||| ||||    
T  38506499 cattcaaacacactctaagagtatt 38506475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 212
Target Start/End: Complemental strand, 34396345 - 34396148
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||| ||||||||||||||||||||||||||        ||||||||||| ||||||  ||||||||||||||| ||||       ||||||  | ||||    
T  34396345 tgacacctaatttcaattttcaaatttggccaaaaaaaattaaaatttattaaagttccccaaaaatgatgacattgaaattttttattactctacccaa 34396246  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 212  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||||||||||||||    
T  34396245 acaaaagtattgagaaatgaaaagaatttaattgaatcatttaaattgcctagaattttaaactctttaaaattttccaattacctcatccaaacaca 34396148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 208
Target Start/End: Complemental strand, 53129628 - 53129434
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcc 112  Q
    |||||||||||||||||||||| |||||||||        |||||||||||||| |||| ||||||||||||||||||||        ||||||||||||    
T  53129628 tgacccctaatttcaattttcagatttggcccaaaaaaaattaaaatttataaa-gttgcccaaaaatgatgacaatgaattttttttattacttcatcc 53129530  T
Q  113 aaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||    ||||||||||| ||||||    
T  53129529 aaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgccttaaattctaaattccttaaaaaaattcaattacctcgtccaaa 53129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 21307308 - 21307111
Alignment:
Q  19 ccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaa 118  Q
    |||||||||||||||| |||||||||||        ||||||||| ||||  || || |||||||||| ||||||       |||||| |||||||||||    
T  21307308 ccctaatttcaatttttaaatttggcccaaaaaaaataaaatttacaaaaagtggcccaaaatgatgataatgaaatcttttattactccatccaaacaa 21307209  T
Q  119 aagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||  ||||||||||||||| | |||||||||||||||| ||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21307208 aaatattgagaaatgaaagcattttaattgaatcatttcaattatctaaaattctaaattctttaaaatttcccaattacctcatccaaacacactct 21307111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 48824834 - 48824637
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||||||| || |||||||||       | ||||||||||||| ||| || |||||||||||||| |        ||| ||||||||||    
T  48824834 tgacccctaatttcaatttccatatttggccccaaaaa-tgaaaatttataaaaattgccctaaaatgatgacaataattttttttattgcttcatccaa 48824736  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    |||| || ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  48824735 acaagagtattgataaatgaaaataatttaattgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattaccttatccaaacacac 48824637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28092000 - 28092216
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||| |||||||||||||| |||||||||||       ||||||||||||||||||  ||||||||||||||| ||||           
T  28092000 tgaaatttacaaattgacctctaatttcaatttttaaatttggcccaaaaaa-ttaaaatttataaaagtttcccaaaaatgatgacattgaaatttttt 28092098  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||| | || ||| ||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||    
T  28092099 atta-tccacccacacaaaagtattgagaaatgaaagaaatttaattgaatcatataaattgcctagaatt-taaattctttaaaattttccaattagct 28092196  T
Q  201 catccaaacacactcttaga 220  Q
    ||||||||||  ||||||||    
T  28092197 catccaaacattctcttaga 28092216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 37054743 - 37054949
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||| ||||||||| ||||||||||||||||       || |||||||||||||||| ||||||||||||||||| ||        |||||| ||||||    
T  37054743 tgacctctaatttcatttttcaaatttggcccaaaaaaattgaaatttataaaagttgcccaaaaatgatgacaataaattttttttattactccatcca 37054842  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    ||||| |  ||| |  |||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  |||||||||||||    
T  37054843 aacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacac 37054942  T
Q  214 tcttaga 220  Q
    |||||||    
T  37054943 tcttaga 37054949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 42005675 - 42005473
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||||||||||||| ||||||||||| ||||       || |||||||||||||||| ||||||||||||||||| ||        |||||| ||||||    
T  42005675 tgacccctaatttcatttttcaaattttgcccaaaaaaattgaaatttataaaagttgcccaaaaatgatgacaataaattttttttattactccatcca 42005576  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    ||||| || ||| |  |||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  |||||||||||||    
T  42005575 aacaatagtatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacac 42005476  T
Q  214 tct 216  Q
    |||    
T  42005475 tct 42005473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 645896 - 645728
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    |||||||||| ||||||||||||||||| |||||||| |        |||||| ||| |||||||||| |||||||||||||| ||||||||| ||||||    
T  645896 ttaaaatttacaaaagttgtccaaaaat-atgacaattagtttttttattactccatacaaacaaaagtattgagaaatgaaaataatttaatcgaatca 645798  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaata 223  Q
    ||| |||| | | |||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||    
T  645797 tttgaattacttggaattctaaattctttaaaattttccaattacctcatccaaacatactattagaata 645728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 6836722 - 6836590
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    ||||||||||||||||||||||||||||||||||||||||       ||| || |||||||||||||  ||||| ||||||||| | |||||||||||||    
T  6836722 ttaaaatttataaaagttgtccaaaaatgatgacaatgaaattttttattgctccatccaaacaaaaatattgataaatgaaagcattttaattgaatca 6836623  T
Q  154 tttaaattgcctagaattctaaattctttaaaa 186  Q
    ||| ||||||||| |||||||||||||||||||    
T  6836622 tttgaattgcctaaaattctaaattctttaaaa 6836590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 52527417 - 52527559
Alignment:
Q  74 ccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattct 173  Q
    |||||||| |||||||||||       |||||| |||||||||||||| ||| | |||| ||||||||||||||||||||||||||||   |||||||||    
T  52527417 ccaaaaataatgacaatgaaattttttattactccatccaaacaaaagtatttaaaaataaaagtaatttaattgaatcatttaaattttttagaattct 52527516  T
Q  174 aaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||| ||||||||||  |||||||||||||||||||||||||    
T  52527517 aaattttttaaaattttccaattacctcatccaaacacactct 52527559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 46707011 - 46707139
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaa-caaaagaattgagaaatgaaagtaatttaattgaatc 152  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||| | ||||||  ||||| ||||| |||||||||||||||||||||||     
T  46707011 ttaaaatttataaaagttgtccaaaaatgatgacaatgaaattttttattactccgtccaaataaaaagtattgaaaaatgaaagtaatttaattgaata 46707110  T
Q  153 atttaaattgcctagaattctaaattctt 181  Q
    ||||||||||| |||||||||||||||||    
T  46707111 atttaaattgcttagaattctaaattctt 46707139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 47767774 - 47767978
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||| ||||||||||||| ||       || |||||||||||||||| |||||||||||||| || |        |||||| |||||||    
T  47767774 tgacccctaatttcatttttcaaatttgggccaaagaatttgaaatttataaaagttgcccaaaaatgatgacgataattttttttattactccatccaa 47767873  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| |  |||||||| |||||||||||||||||| ||||  || ||||||||||||||| |||||||||||| |||  ||||||||||||||    
T  47767874 acaataatatttaagaatgaaagcaatttaattgaatcatttgaattatcttgaattctaaattcttcaaaatttctcaaatactccatccaaacacact 47767973  T
Q  215 cttag 219  Q
    |||||    
T  47767974 cttag 47767978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 50168349 - 50168190
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    ||||||| |||||||||||   ||||||||||||||||||       |||||| ||||||||||| |  ||| |||||||||   ||||||||||||  |    
T  50168349 ttaaaatgtataaaagttgctaaaaaatgatgacaatgaaatt----attactccatccaaacaagaatatttagaaatgaagacaatttaattgaagta 50168254  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 217  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  50168253 tttaaattgccaagaattctcgattctttaaaatttctcaattacctcatccaaacacactctt 50168190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 30766902 - 30767106
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||| ||| ||||||||||||||||       || |||||||| ||||||| ||||||| ||||||||| ||       |||||| |||||||    
T  30766902 tgacccctaatgtcatttttcaaatttggcccaaaaaa-ttgaaatttatgaaagttgcccaaaaacgatgacaataaatttttttattactccatccaa 30767000  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| |  |||||||  |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||  ||  ||| ||||||||||    
T  30767001 acaataatatttaagaatgaaaacaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaacactccattcaaacacact 30767100  T
Q  215 cttaga 220  Q
    ||||||    
T  30767101 cttaga 30767106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 55460619 - 55460810
Alignment:
Q  19 ccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaa 118  Q
    ||||||||||||||| ||||||||||||       ||||| ||||||||||||| ||||||||||||||||||||       |||||| |||||||||||    
T  55460619 ccctaatttcaatttccaaatttggcccaaaaaatttaaa-tttataaaagttgcccaaaaatgatgacaatgaaattttttattactccatccaaacaa 55460717  T
Q  119 aagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacac 211  Q
    |   ||| || |||||| | |||||||||||| ||||| ||||||||| |||||||||||||| ||||    ||| || ||||||||||||||    
T  55460718 atatatttagtaatgaaggcaatttaattgaaacatttgaattgcctaaaattctaaattcttaaaaaaaaatcatttgcctcatccaaacac 55460810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 7302744 - 7302942
Alignment:
Q  19 ccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaaca 117  Q
    ||||||||||| ||||||||||||||||        || |||||||||||||||| |||||| |||||||||| ||       |||||| ||||||||||    
T  7302744 ccctaatttcatttttcaaatttggcccaaaaaaaattgaaatttataaaagttgcccaaaagtgatgacaataaatttttttattactccatccaaaca 7302843  T
Q  118 aaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    | |  ||| |  |||||||| |||||||||||||||| | ||||  |||||||||||||||||| |||||||||||| |||   |||||||||||||||    
T  7302844 ataatatttaagaatgaaagcaatttaattgaatcatatgaattatctagaattctaaattcttcaaaatttctcaaatactcaatccaaacacactct 7302942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 218
Target Start/End: Complemental strand, 44288223 - 44288022
Alignment:
Q  17 acccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaac 116  Q
    |||| |||||||||||| ||||||||||||       |||||||||||||||||||| ||||||| || ||||| ||       ||| || || || |||    
T  44288223 acccttaatttcaatttccaaatttggcccaaaaaaattaaaatttataaaagttgttcaaaaattataacaataaatttttttatttctccacccgaac 44288124  T
Q  117 aaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||  ||| ||||||||| | |||||||||||||| ||| ||||| ||| |||| |||||| || ||||||||  ||||||||| ||||||||||||||    
T  44288123 aaaattatttagaaatgaaggcaatttaattgaatcttttgaattgtctaaaattataaatttttcaaaatttcctaattacctcgtccaaacacactct 44288024  T
Q  217 ta 218  Q
    ||    
T  44288023 ta 44288022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 2105193 - 2105279
Alignment:
Q  130 aatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||  ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||    
T  2105193 aatgaaaccaatttaattgaatcatttaaattacctagaattataaattcttcaaaatttctcaattactccatccaaacacactct 2105279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 36636174 - 36636367
Alignment:
Q  17 acccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaac 116  Q
    |||||| |||||||||||||||||||| ||       | |||| |||| |||||||  |||||||||||||||||||       || ||| ||||||||     
T  36636174 acccctgatttcaattttcaaatttggtccaaaaaaataaaaaattatgaaagttgctcaaaaatgatgacaatgaaattttgtatcactccatccaaaa 36636273  T
Q  117 aaaagaatt---gagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaa 207  Q
    |||| || |   ||||||||||||||||| |||||||| |||||| ||| |||||||| ||| ||||||||||||||||||||| | |||||||    
T  36636274 aaaaaaaatagtgagaaatgaaagtaattaaattgaataatttaatttgtctagaattataatttctttaaaatttctcaattatcgcatccaa 36636367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 218
Target Start/End: Complemental strand, 31189074 - 31188918
Alignment:
Q  61 ttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaat 160  Q
    |||||||||||||||| ||||||||||||||||       ||| || |||||||||||||  ||| ||||||   |  |||||||||||||||||| |||    
T  31189074 ttataaaagttgtccagaaatgatgacaatgaaattttttatttctccatccaaacaaaaatatttagaaatcctaacaatttaattgaatcatttgaat 31188975  T
Q  161 tgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    ||  ||||||||||| |||||||||||||||||| | | |||| ||||||||||||||    
T  31188974 tgtttagaattctaatttctttaaaatttctcaa-tccttcattcaaacacactctta 31188918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 47284001 - 47283791
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||| | ||||||||||||||||       |||||||||||||||||||||||||||| ||||||||          ||| || |||||||    
T  47284001 tgacccctaattttatttttcaaatttggcccaaaaaaattaaaatttataaaagttgtccaaaaattatgacaatatttgtttttatttctccatccaa 47283902  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaat------ttctcaattacctcatccaaa 208  Q
    |||| |  ||| |  |||||||| ||||||| ||||||||||||||| | || |||| ||||||||| |||||      |||||||||||  ||||||||    
T  47283901 acaataatatttaagaatgaaagcaatttaaatgaatcatttaaattacttaaaattttaaattcttcaaaatttctcattctcaattactccatccaaa 47283802  T
Q  209 cacactcttag 219  Q
    |||||||||||    
T  47283801 cacactcttag 47283791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 26547412 - 26547527
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||||||||| |  ||| |  |||||||| |||| ||||||||||||| |||| |||| |||||||||||| | |||| ||||||||||||     
T  26547412 attacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcatttgaattccctaaaattctaaattcatcaaaa-ttctcaattaccc 26547510  T
Q  201 catccaaacacactctt 217  Q
    |||||||||||||||||    
T  26547511 catccaaacacactctt 26547527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 19475966 - 19476028
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  19475966 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctta 19476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 13339206 - 13339118
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattt 189  Q
    |||||| |||||||||||||  ||| | |||| |||  |||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  13339206 attactccatccaaacaaaaatatttaaaaataaaaaaaatttaattgaatcatttaaattgcctaaaattctaaattcttcaaaattt 13339118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 13176306 - 13176195
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||| ||||||||  ||| | |||| | || |||||||||||||||||||||||| ||| |||||||||||||| |||||||  || ||||||    
T  13176306 attactccatcgaaacaaaaatatttaaaaataacagaaatttaattgaatcatttaaattggctaaaattctaaattcttcaaaattttccatttacct 13176207  T
Q  201 catccaaacaca 212  Q
    ||| ||||||||    
T  13176206 catacaaacaca 13176195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 8762276 - 8762338
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||    
T  8762276 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactctta 8762338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 33871824 - 33871764
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||    
T  33871824 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccacacacactct 33871764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 47714426 - 47714486
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||||    
T  47714426 taaattgcctagaatttgaaattctttaaaatttccaaattacctcatccaaacacactct 47714486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 187
Target Start/End: Original strand, 44329434 - 44329566
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    ||||||||||||||| ||  ||||||   |||||||||||       |||||  |||||||||||||| ||| ||||  |||||||||||| ||||||||    
T  44329434 ttaaaatttataaaacttacccaaaatacatgacaatgaaatctttcattaccccatccaaacaaaagcattaagaagcgaaagtaattta-ttgaatca 44329532  T
Q  154 tttaaattgcctagaattctaaattctttaaaat 187  Q
    ||||||| || || |||| |||||||||||||||    
T  44329533 tttaaatggcttaaaattttaaattctttaaaat 44329566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 2733026 - 2733084
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 197  Q
    |||||||||||||  ||| |||||||||| ||||||||||| |||||||||||||||||    
T  2733026 aatttaattgaatttttttaattgcctagtattctaaattccttaaaatttctcaatta 2733084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 34936607 - 34936450
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaa-tgatgacaatgaannnnnnnattacttcatccaaacaaaaga-attgagaaatgaaagtaatttaattgaat 151  Q
    ||||||||||||||||||| | ||||| ||||||||| |||       |||||| ||||||||||||||  ||||| | || ||| ||||||||||||||    
T  34936607 ttaaaatttataaaagttgccaaaaaaatgatgacaaagaaattttttattactccatccaaacaaaagttattgaaagataaaa-taatttaattgaat 34936509  T
Q  152 catttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaca 210  Q
    ||||| |||||| || |||| |||||| || ||||  | ||||||||||| | ||||||    
T  34936508 catttgaattgcttaaaattttaaatttttcaaaaaatttcaattacctcgttcaaaca 34936450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 46636171 - 46636249
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaa 93  Q
    ||||| |||||||||||||| |||||| |||        |||||||||||||||||||||||||||| |||||||||||    
T  46636171 tgaccactaatttcaattttaaaattttgcctaaaaaaattaaaatttataaaagttgtccaaaaattatgacaatgaa 46636249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 31022020 - 31022095
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaat 90  Q
    ||||| ||||||| | ||||||||||||||||       ||||||||||||||||||| |||||||| ||||||||    
T  31022020 tgacctctaatttaatttttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaattatgacaat 31022095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 47000170 - 47000270
Alignment:
Q  109 atccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 208  Q
    ||||||||||||  ||| | ||||||| || ||||||||||||||||| |||||| ||  |||||||   ||| ||||||| ||||||||||||| ||||    
T  47000170 atccaaacaaaaatatttaaaaatgaatgtcatttaattgaatcatttgaattgcttaacattctaa---cttaaaaattt-tcaattacctcattcaaa 47000265  T
Q  209 cacac 213  Q
    |||||    
T  47000266 cacac 47000270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 15760214 - 15760161
Alignment:
Q  108 catccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaatt 161  Q
    |||||||||||||| ||| ||||||||||  |||||||||||||||||| ||||    
T  15760214 catccaaacaaaagtattcagaaatgaaaacaatttaattgaatcatttgaatt 15760161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 46636311 - 46636376
Alignment:
Q  129 aaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaa 194  Q
    ||||||| | |||||||||||||||||| ||||||||||||||  |||   |||||||||||||||    
T  46636311 aaatgaatgcaatttaattgaatcatttgaattgcctagaatttcaaaaaatttaaaatttctcaa 46636376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 54761486 - 54761417
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 225  Q
    ||||||| ||| |||| |||||||| ||||||||   |||||||||||||||||||||||| ||| ||||    
T  54761486 taaattgtctaaaattttaaattctgtaaaattttcaaattacctcatccaaacacactctaagagtatt 54761417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 45867192 - 45867281
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttc 190  Q
    ||||||| ||||||||||||  ||| | ||||||| | |||| |||||||| |||| ||||||| | | ||||| ||||| |||||||||    
T  45867192 attactttatccaaacaaaaacatttaaaaatgaaggaaattcaattgaattatttgaattgcccaaagttctagattctctaaaatttc 45867281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 47337467 - 47337540
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaat 90  Q
    ||||||||||||| | ||||||||||| ||||       |||||||||||||||||| |||||||| |||||||||    
T  47337467 tgacccctaattttagttttcaaattttgcccaaaaa--ttaaaatttataaaagttttccaaaaacgatgacaat 47337540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 2732951 - 2732983
Alignment:
Q  61 ttataaaagttgtccaaaaatgatgacaatgaa 93  Q
    ||||||| |||||||||||||||||||||||||    
T  2732951 ttataaatgttgtccaaaaatgatgacaatgaa 2732983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 5e-81; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 2126171 - 2126389
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| |||||  ||||||||||||| |||||||||||       ||||||||||||||||||| ||||||||||||||||||||           
T  2126171 tgaaatttacattttgacctataatttcaatttttaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 2126270  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2126271 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattaccc 2126370  T
Q  201 catccaaacacactcttag 219  Q
    |||||||||||||||||||    
T  2126371 catccaaacacactcttag 2126389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 35470457 - 35470676
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||       | ||||||||||||||||| |||||||||||||||||||            
T  35470457 tgaaatttacattttgacccctaatttcaattt-caaatttggcccaaaaaaataaaaatttataaaagttgcccaaaaatgatgacaatgatttttttt 35470555  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35470556 tattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattaca 35470655  T
Q  200 tcatccaaacacactcttaga 220  Q
    |||||||||||||||||||||    
T  35470656 tcatccaaacacactcttaga 35470676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 40547984 - 40547766
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||||||||||| ||||            
T  40547984 tgaaatttatattttgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgccaaaaaatgatgacgatgagttttttt 40547885  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40547884 tattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaattacc 40547785  T
Q  200 tcatccaaacacactctta 218  Q
    |||||||||||||||||||    
T  40547784 tcatccaaacacactctta 40547766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 42775993 - 42775777
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||         ||||||||||||||||| |||||||| |||||||| ||           
T  42775993 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaa---aaaatttataaaagttgcccaaaaataatgacaattaattttttt 42775897  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42775896 tattactccatccaaacaaaagtatttagaaatgaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacc 42775797  T
Q  200 tcatccaaacacactcttag 219  Q
    ||||||||||||||||||||    
T  42775796 tcatccaaacacactcttag 42775777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27284435 - 27284221
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||| | | |||||||||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||||||           
T  27284435 tgaaatttaaaatttgacccctaatttcaattttcaaatttggccaaaaaaatttaaaatttataaaagttgtcgaaaaatgatgacaatgaattttttt 27284336  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||  |    
T  27284335 attacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaaccatttaaattgcctagaattctaaattctttaaaattttcaaattatat 27284236  T
Q  201 catccaaacacactc 215  Q
    |||||||||||||||    
T  27284235 catccaaacacactc 27284221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 47108567 - 47108771
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||| |||||| |||||||||||       ||||||||||||||| ||| |||||||| |||| ||||||       |||||| |||||||    
T  47108567 tgacccctaattttaattttaaaatttggcccaaaaaacttaaaatttataaaaattgcccaaaaattatgataatgaaattttttattactccatccaa 47108666  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||     
T  47108667 acaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttccaattacctcatccaaacacaca 47108766  T
Q  215 cttag 219  Q
    |||||    
T  47108767 cttag 47108771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 28751906 - 28751744
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    ||||||||||||||||||||||||||||||||| |||| |       ||||||||||||||||| || |||||| |||||||||||||||||||||||||    
T  28751906 ttaaaatttataaaagttgtccaaaaatgatgaaaatggatttttttattacttcatccaaacacaaaaattgaaaaatgaaagtaatttaattgaatca 28751807  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28751806 tttaaattgcctataattctaaattttttaaaatttctcaattatctcatccaaacacactct 28751744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 41139859 - 41140020
Alignment:
Q  55 taaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcat 154  Q
    |||||||||||||||||| ||||||||||||||||||||       ||| | ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  41139859 taaaatttataaaagttgcccaaaaatgatgacaatgaaattttgtattccctcatccaaacaaaagtattgagaaatgaaaataatttaattgaatcat 41139958  T
Q  155 ttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||    
T  41139959 ttaaattgcttagaattttaaattctttaaaatttctcaattacttcttccaaacacactct 41140020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 21782321 - 21782523
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||||| |||||||||||||||| ||| ||       || |||||||||||||||| |||||||| |||||||||||       |||||| |||||||    
T  21782321 tgacccctgatttcaattttcaaatatggtccaaaaaaatttaaatttataaaagttg-ccaaaaattatgacaatgaaattttttattactacatccaa 21782419  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||| ||| ||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21782420 acaaaagtattaagaaatgaaagtattttaatggaatcatttgaattgtctagaattctaaattctttaaaatttcacaattacctcatccaaacacact 21782519  T
Q  215 ctta 218  Q
    ||||    
T  21782520 ctta 21782523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 56118382 - 56118170
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||||||||||||||||||| |||||||||||        |||  |||||||||||| ||||||| |||||||||||||           
T  56118382 tgaaatttacaagttgacccctaatttcaatttt-aaatttggcccaaaaaaaataa--tttataaaagttatccaaaattgatgacaatgaattttttt 56118286  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     |||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | |||| |||||||| |||||||||    
T  56118285 tattactccatccaaacaaaagaattgagaaataaaagtaatttaattaaatcatttaaattgcctagaattctgagttctctaaaatttgtcaattacc 56118186  T
Q  200 tcatccaaacacactc 215  Q
    ||||||||||||||||    
T  56118185 tcatccaaacacactc 56118170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 26534819 - 26535038
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnn 99  Q
    |||||||||||   ||| |||||| |||||||||||||||||||||        ||||||||||||||| ||| ||||||||||||  ||||||          
T  26534819 tgaaatttacaaattgatccctaagttcaattttcaaatttggccccctaaaaattaaaatttataaaacttgcccaaaaatgatggtaatgaatttttt 26534918  T
Q  100 n-attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 198  Q
      || ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26534919 ttatcactccatccaaacaaaagtattgaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaactac 26535018  T
Q  199 ctcatccaaacacactcttag 219  Q
     | ||||||||||| ||||||    
T  26535019 at-atccaaacacattcttag 26535038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 30303467 - 30303670
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||| ||||||| |||||| ||||||||||        |||||||||||||| |||||||||||||||||| ||||||        |||||| ||||||    
T  30303467 tgacctctaattttaatttttaaatttggccaaaaaaaattaaaatttataaa-gttgtccaaaaatgatgagaatgaattttttttattactccatcca 30303565  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    |||||||  ||| ||||||||| ||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  30303566 aacaaaaatatttagaaatgaaggtagtttaattgaatcatttgaattgcctagaattttaaattctttaaaatttctcaattatctcatccaaacacac 30303665  T
Q  214 tctta 218  Q
    |||||    
T  30303666 tctta 30303670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 42776418 - 42776630
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||||||||||| |||||| |||||||||||       |||||||||||| || ||| |||||||||| | |||||||           
T  42776418 tgaaatttacaaattgacccctaattttaatttttaaatttggcccaacaaatttaaaatttatataatttgcccaaaaatgacggcaatgaaatttttt 42776517  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||| || |||||||||||||  ||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||  |||||||||    
T  42776518 atttctccatccaaacaaaaatattgaaaaatgaaagtaattgaattgaatcatttaaattgcttaggattctaaattctttaaaattttccaattacct 42776617  T
Q  201 catccaaacacac 213  Q
    |||||||||||||    
T  42776618 catccaaacacac 42776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 46242819 - 46242622
Alignment:
Q  18 cccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatccaaac 116  Q
    ||||||||||  ||||||||||| |||||       ||||||||||||||||||  || |||||||||||||||||        |||||| |||||||||    
T  46242819 cccctaatttatattttcaaattcggcccaaaaaaattaaaatttataaaagtt--cccaaaatgatgacaatgaaatttttttattactccatccaaac 46242722  T
Q  117 aaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||  ||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  46242721 aaaaatattgaaaaatgaaagtaatttaattcaatcatttaaattgcttagaattataaattctttaaaatttcccaattacctcatccaaacacactct 46242622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 16299992 - 16299781
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||| ||||||||| |||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||           
T  16299992 tgaaatttacaaattgatccctaattttaattttcaaatttgtcccaaaaagaataaaatttataaaagttgtccaaaaatgatgacaatgaaatttttt 16299893  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||  ||||| || ||||||||||||||||||||||||||||||  |||||||| |||||||| ||| ||||  |||||||||    
T  16299892 attactgcatccaaacaaaaatattgataactgaaagtaatttaattgaatcatttaaattaactagaattttaaattctctaatattttccaattacct 16299793  T
Q  201 catccaaacaca 212  Q
    ||| ||||||||    
T  16299792 cattcaaacaca 16299781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31947906 - 31948119
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||||||||||| |||||||||||||| |||       ||||||||||||||||||  |||||||||||| || ||||           
T  31947906 tgaaatttacaaattgacccctaattttaattttcaaatttgacccaaaaaaattaaaatttataaaagtttcccaaaaatgatgccattgaaatttttt 31948005  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| || ||||||||||| ||||||||||||| | |||||||||||||||||||||||||||| |||| |||||||||||||| ||  |||||||||    
T  31948006 attactccacccaaacaaaagtattgagaaatgaatggaatttaattgaatcatttaaattgcctaaaattttaaattctttaaaagtttccaattacct 31948105  T
Q  201 catccaaacacact 214  Q
    | ||||||| ||||    
T  31948106 cgtccaaacgcact 31948119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 46242362 - 46242169
Alignment:
Q  19 ccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaa 118  Q
    |||||||||||||||||||||||| |||       | |||||||||| |||||| |||||||||| ||| |||||       ||||||||||||||||||    
T  46242362 ccctaatttcaattttcaaatttgtcccaaaaaact-aaaatttatacaagttgcccaaaaatgacgacgatgaatttttttattacttcatccaaacaa 46242264  T
Q  119 aagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||| |||||||| |||||| |||||||||||||||||||||||  |||||||||||||||||| |||||| || |||||| |||||||||||||||    
T  46242263 aagtattgagaagtgaaagcaatttaattgaatcatttaaattatctagaattctaaattcttcaaaattcct-aattacttcatccaaacacact 46242169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 13318325 - 13318216
Alignment:
Q  105 cttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatc 204  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||||||||| ||| |||||    
T  13318325 cttcaaccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattccata-aaatctaaattctttaaaatttctcaaatacatcatc 13318227  T
Q  205 caaacacactc 215  Q
    |||||||||||    
T  13318226 caaacacactc 13318216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 54566561 - 54566722
Alignment:
Q  55 taaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcat 154  Q
    |||||||||||||||||| ||||||||||||||||| |        |||||||||||||||||| |  ||| |  |||||||| |||| |||||||||||    
T  54566561 taaaatttataaaagttgcccaaaaatgatgacaataattttttttattacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcat 54566660  T
Q  155 ttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    || |||| ||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||    
T  54566661 ttgaattcccttgaattttaaattcattaaaatttctcaattaccccatccaaacacactct 54566722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 16516521 - 16516718
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||| | ||||||||||||||||        | |||||||||||||||| | ||||||||||||||| ||       ||||||||||||||    
T  16516521 tgacccctaattttatttttcaaatttggcccaaaaaaaatcaaatttataaaagttgcctaaaaatgatgacaat-aatttttttattacttcatccaa 16516619  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| || |||||||| ||||     ||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16516620 acaataatatttaggaatgaaagcaatt-----gaatcatttgaattaccaagaattctaaattcttcaaaatttctcaattacctcatccaaacacact 16516714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 24705716 - 24705878
Alignment:
Q  55 taaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    |||||||||||||||||| |||||||||||||||||  |        |||||||||||||||||| |  ||| | ||||||||| |||| ||||||||||    
T  24705716 taaaatttataaaagttgcccaaaaatgatgacaatatatattttttattacttcatccaaacaataacatttaaaaatgaaagcaattgaattgaatca 24705815  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||| |||| |||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  24705816 tttgaattccctaaaattctaaattcttcaaaatttttcaattaccccatccaaacacactct 24705878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 17727759 - 17727960
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||| |||||||||||||||||||||||||       ||||| ||||||||||||| ||||||||||||||||||||       |||| | |||||||    
T  17727759 tgacccttaatttcaattttcaaatttggccccaaaaaattaaa-tttataaaagttgcccaaaaatgatgacaatgaaattttttattattccatccaa 17727857  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctt-taaaatttctcaattacctcatccaaacacac 213  Q
    |||| |  ||| |||||||||   ||||||||||||| |||| |||||| |||||||||||||||||  ||||    |||||||||||||||||||||||    
T  17727858 acaagaatatttagaaatgaagtcaatttaattgaataatttgaattgcttagaattctaaattcttcaaaaaaaattcaattacctcatccaaacacac 17727957  T
Q  214 tct 216  Q
    |||    
T  17727958 tct 17727960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 4490368 - 4490535
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||| |||||||||||| |||||||       |||||| ||||  |    
T  4490368 tgacccctaatttcaattttcaaatttggcc-gaaaaaattaaaatttataaaagttgcccaaaaatgatgccaatgaatttttt-attactccatctta 4490465  T
Q  115 acaaaa-gaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattcttta 183  Q
    |||||| | |||||||||||||||||||||||||||||  ||||||||| ||| ||||||||||| ||||    
T  4490466 acaaaaagtattgagaaatgaaagtaatttaattgaattgtttaaattgtctaaaattctaaattgttta 4490535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 5579759 - 5579647
Alignment:
Q  108 catccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaa 207  Q
    |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||  | ||||| ||||||||| |||||||   ||||||||||| |||    
T  5579759 catccaaataaaagtattgagaaatgaaaggaatttaattgaatcatttaaattgtttggaattttaaattcttcaaaattttctaattacctcattcaa 5579660  T
Q  208 acacactcttaga 220  Q
    |||||| ||||||    
T  5579659 acacacacttaga 5579647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 17727436 - 17727564
Alignment:
Q  58 aatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcattta 157  Q
    ||||||||||| ||| ||||||||||||||||||||       || | ||  |||||||||||| |||| ||||||||||||||||||||||||||||||    
T  17727436 aatttataaaatttgcccaaaaatgatgacaatgaaatattttatcaatttttccaaacaaaagtattgtgaaatgaaagtaatttaattgaatcattta 17727535  T
Q  158 aattgcctagaattctaaattctttaaaa 186  Q
    |||| ||   |||||||||||||||||||    
T  17727536 aattaccctaaattctaaattctttaaaa 17727564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 218
Target Start/End: Complemental strand, 19461425 - 19461264
Alignment:
Q  58 aatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcattt 156  Q
    ||||||||||||||||||||||||||||||| ||||        |||| ||||||| ||||| || ||| |||||| ||   |||||||||||||||| |    
T  19461425 aatttataaaagttgtccaaaaatgatgacagtgaaattgttttattaattcatcccaacaagagcatttagaaataaagacaatttaattgaatcatct 19461326  T
Q  157 aaattgcctagaattctaaattcttt-aaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||||| |||| |||||||||| |||| |||| ||||||||||| ||||||||||||||    
T  19461325 aaattgcctaaaattttaaattctttaaaaaattct-aattacctcattcaaacacactctta 19461264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 52294813 - 52294609
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||||||||||||||||||| ||||||||||        ||||||||||||||||||  ||||||||||||||| ||||           
T  52294813 tgaaatttacaaattgacccctaatttcaatttttaaatttggccaaaaaaaattaaaatttataaaagttccccaaaaatgatgacattgaaatttttt 52294714  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaa-tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
    |||||| || ||| ||||||| ||| | |||  | | ||| |||||||||||||||||||||||||| |||| ||||||| ||||||    |||||||||    
T  52294713 attactccacccagacaaaagtatttaaaaaatataataaatttaattgaatcatttaaattgcctaaaattttaaattcattaaaaaaattcaattacc 52294614  T
Q  200 tcatc 204  Q
    |||||    
T  52294613 tcatc 52294609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 10633181 - 10633241
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  10633181 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 10633241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 31473999 - 31474062
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    ||||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  31473999 taaattgtctagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttag 31474062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 21012499 - 21012439
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  21012499 taaattgtctagaattttaaattctttaaaatttttaaattacctcatccaaacacactct 21012439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 5715986 - 5716190
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||| ||||||||||||| |||||||||||       ||||| || |||| ||||  | |||||| |||| ||||||       ||||||| ||||||    
T  5715986 tgacccttaatttcaatttttaaatttggcccaaaaaaattaaatttgataatagtttccaaaaaataatgagaatgaaattttttattacttgatccaa 5716085  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||  ||| ||||||| |   ||||||| | |||||||| |||||| ||||||||||||||| |  |||||||  |||||||| ||||||||| |||    
T  5716086 acaaaaatatttagaaatggagacaatttaactaaatcatttcaattgcttagaattctaaattcatcgaaatttccaaattaccttatccaaacatact 5716185  T
Q  215 cttag 219  Q
     ||||    
T  5716186 attag 5716190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 9449568 - 9449412
Alignment:
Q  58 aatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcattta 157  Q
    ||||||| |||| || |||||| |||||||||||||       | |||| |||| ||||||||  ||| ||||  ||||| ||||||||||| ||||||     
T  9449568 aatttatgaaaggtgcccaaaagtgatgacaatgaatttttttactactccatctaaacaaaaatatttagaa--gaaagcaatttaattgattcatttt 9449471  T
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||| |||||||||| ||||||| | ||    ||||||||||||||||||||||||||    
T  9449470 aattgtctagaattctgaattcttcacaaaaaatcaattacctcatccaaacacactct 9449412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 29091606 - 29091676
Alignment:
Q  149 aatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||||||| |||| |||||||||||||||| || |||||||||||| ||||  ||||||||||||||||||    
T  29091606 aatcatttgaattccctagaattctaaatttttcaaaatttctcaaataccctatccaaacacactcttag 29091676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 3803718 - 3803779
Alignment:
Q  160 ttgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaa 221  Q
    ||||||| |||| |||||||||||||||||   |||||||||||||||||||||||| ||||    
T  3803718 ttgcctaaaattttaaattctttaaaattttcaaattacctcatccaaacacactctaagaa 3803779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 41983368 - 41983417
Alignment:
Q  168 aattctaaattctttaaaatttctcaattacctcatccaaacacactctt 217  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  41983368 aattctaaattctttaaaatttctcaattatcccattcaaacacactctt 41983417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 29685756 - 29685633
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    |||||||||||| |  ||| |||||||| |||||||||||       |||||| |||||||||||||  ||| |||| |||| | |||||||||||||||    
T  29685756 ttaaaatttatatacattgcccaaaaat-atgacaatgaaattttatattactccatccaaacaaaaatatttagaagtgaatgcaatttaattgaatca 29685658  T
Q  154 tttaaattgcctagaattctaaatt 178  Q
    ||| ||||| ||| ||||| |||||    
T  29685657 tttgaattgtctaaaattcaaaatt 29685633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 218
Target Start/End: Complemental strand, 53760514 - 53760322
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||| || |||||||||||||       ||||||||||||||||||| ||||| || ||||||||          ||| || |||||||    
T  53760514 tgacccctaatttcatttgtcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaagattatgacaatatttgtttttatttctccatccaa 53760415  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| || |||||||| ||||||||||||            ||||||||| ||||||||| ||||||||||||||||  |||||||||||| |    
T  53760414 acaataatatttaggaatgaaagcaatttaattgaa-----------acctagaattataaattcttcaaaatttctcaattactccatccaaacacaat 53760326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 31334854 - 31334904
Alignment:
Q  112 caaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattg 162  Q
    |||||||||| ||||| |||| |||||||||||||||||||| ||||||||    
T  31334854 caaacaaaagtattgacaaataaaagtaatttaattgaatcacttaaattg 31334904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 56339549 - 56339598
Alignment:
Q  149 aatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 198  Q
    |||||||| |||| |||| |||||||||||||| ||||||||||||||||    
T  56339549 aatcatttgaattacctataattctaaattcttcaaaatttctcaattac 56339598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 13088474 - 13088352
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    |||||| ||||||||| |  |||||| |||||||||||||       ||||||||| ||| | ||||  ||| |||||| |||  ||||||||| |||||    
T  13088474 ttaaaaattataaaagattcccaaaattgatgacaatgaaatttt--attacttcacccatataaaaatatttagaaataaaaacaatttaattaaatca 13088377  T
Q  154 tttaaattgcctagaattctaaatt 178  Q
    ||| ||||||||| |||||||||||    
T  13088376 tttgaattgcctaaaattctaaatt 13088352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 56339454 - 56339525
Alignment:
Q  19 ccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaat 90  Q
    ||||||||||| ||||||||||||||||       ||||||||||||||||||  ||||| || ||||||||    
T  56339454 ccctaatttcatttttcaaatttggcccaaaaagattaaaatttataaaagtttcccaaagattatgacaat 56339525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 43955081 - 43955048
Alignment:
Q  183 aaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||| |||||||||||||||||||||||||    
T  43955081 aaaatttcccaattacctcatccaaacacactct 43955048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 2e-80; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 927637 - 927850
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnat 102  Q
    ||||||||||| |||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||||||||       ||    
T  927637 aaatttacattttgacccctaatttcaattttcaaatttgacccaaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttat 927736  T
Q  103 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  927737 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattaaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctca 927836  T
Q  203 tccaaacacactct 216  Q
    | ||||||||||||    
T  927837 ttcaaacacactct 927850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 41761959 - 41761744
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||           
T  41761959 tgaaatttacattttgaccc-taatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 41761861  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41761860 tattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttctcaattacc 41761761  T
Q  200 tcatccaaacacactct 216  Q
    |||||||||||||||||    
T  41761760 tcatccaaacacactct 41761744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 12480235 - 12480452
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||||||||||||||||||| |||||||| ||       ||||||||||||||||||| ||||||||||||| ||||||           
T  12480235 tgaaatttacaaattgacccctaatttcaatttttaaatttggtcctaaaaa-ttaaaatttataaaagttgcccaaaaatgatgataatgaaatttttt 12480333  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  12480334 attacttcatcctaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcttagaattctaaattctttaaaattttccaattacct 12480433  T
Q  201 catccaaacacactcttag 219  Q
    |||||||||||||||||||    
T  12480434 catccaaacacactcttag 12480452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 15 - 220
Target Start/End: Complemental strand, 17542084 - 17541880
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||||||||||||||||| |||||||||||       | ||||||||||||||||| |||||||||||| |||||||       ||| || |||||||    
T  17542084 tgacccctaatttcaatttttaaatttggcccaaaaaaat-aaaatttataaaagttgcccaaaaatgatggcaatgaaattttttatttctccatccaa 17541986  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||  |||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17541985 acaaaaatattgagaaattaaagtaatttaattgaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacact 17541886  T
Q  215 cttaga 220  Q
    ||||||    
T  17541885 cttaga 17541880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 22304936 - 22304734
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||||| ||||||||||||||||||||||||       ||||||||||||||||||| |||||||||||| |||||||        ||| || ||||||    
T  22304936 tgaccccaaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatggcaatgaaatttttttatttctccatcca 22304837  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| ||||    
T  22304836 aacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcctaggattctaaattctttaaaatttcccaattacctcatcaaaatacac 22304737  T
Q  214 tct 216  Q
    |||    
T  22304736 tct 22304734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 14835126 - 14835338
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||||||||||||||||||||||||||| ||       |||||||||| |||||||| ||||||||||||||||||||           
T  14835126 tgaaatttacaaattgacccctaatttcaattttcaaatttggtccaaaaaa-ttaaaatttacaaaagttgcccaaaaatgatgacaatgaaattttat 14835224  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||| |||||||||||| | || ||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||| |    
T  14835225 attactacatccaaacaaaagtattgagaaatgataatattttaattgaatcatttaaattacctaaacttctaaattctttaaaatttcccaattactt 14835324  T
Q  201 catccaaacacact 214  Q
     |||||||||||||    
T  14835325 tatccaaacacact 14835338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 32249811 - 32249649
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatc 152  Q
    |||||||||||||||||||||||||| |||||||| ||||        |||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  32249811 ttaaaatttataaaagttgtccaaaa-tgatgacagtgaaatttttttattactccatccaaacaaaagtattgagaaataaaagtaatttaattgaatc 32249713  T
Q  153 atttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  32249712 atttaaattgcctagaattctaaattctttaaaattttcaaattacctcatccaaacacactct 32249649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 1209053 - 1209213
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    ||||||||||||||||||  ||||||||||||||||||||       |||||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  1209053 ttaaaatttataaaagttacccaaaaatgatgacaatgaaattttttattacttcattcaaacaaaagtattgaaaaatgaaagtaatttaattgaatca 1209152  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||||||| ||| | ||||||||||||||||||||||||||   ||||||||||||||||||    
T  1209153 tttaaattgtctaaatttctaaattctttaaaatttctcaat--gctcatccaaacacactct 1209213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 15270631 - 15270421
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||||||||||||||||||| ||||||||||        |||||||||| ||||||| ||| |||||||||||||||||           
T  15270631 tgaaatttacaaactgacccctaatttcaatttttaaatttggcctaaaaaaattaaaatttacaaaagtt-tcccaaaatgatgacaatgaaatctttt 15270533  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||||||  ||||||||||||  ||||||||||||||| | |||||||||||||||| |||| |||||||||||||||||||||||||||  |||||||||    
T  15270532 attactctatccaaacaaaaatattgagaaatgaaagcattttaattgaatcatttcaattacctagaattctaaattctttaaaattttccaattacct 15270433  T
Q  201 catccaaacaca 212  Q
    ||| ||||||||    
T  15270432 cattcaaacaca 15270421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 60 - 218
Target Start/End: Original strand, 33146474 - 33146632
Alignment:
Q  60 tttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaa 159  Q
    ||||||||||||| |||||||||||| |||||||       ||| || |||||||||||||  |||||||||||||||||| |||||||||| |||||||    
T  33146474 tttataaaagttgcccaaaaatgatggcaatgaaattctttatttctccatccaaacaaaaatattgagaaatgaaagtaacttaattgaattatttaaa 33146573  T
Q  160 ttgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  33146574 ttgcctaagattctaaattctttgaaatttctcaactacctcatccaaacacactctta 33146632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 28489813 - 28490009
Alignment:
Q  17 acccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaac 116  Q
    |||| |||||||||||||||||||||||||       ||||||||||||||| ||| | |||||||||| | |||||       ||| || |||||||||    
T  28489813 acccttaatttcaattttcaaatttggcccaaaaaa-ttaaaatttataaaaattgcctaaaaatgatggcgatgaaattttttatttctccatccaaac 28489911  T
Q  117 aaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||   ||||||||||||||||||||||    
T  28489912 aaaaatattgagaaatgaacgtaatttaattgaatcatttaaattgcctaggattctaaattccttaaaattttctaattacctcatccaaacacact 28490009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 33995644 - 33995435
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||||||||||||||||| ||||||||||        |||||||||| |||| ||  ||||||||||||||||||||       |||||| |||||||    
T  33995644 tgacccctaatttcaatttttaaatttggcc-aaaaaaattaaaatttacaaaatttacccaaaaatgatgacaatgaaattttttattactccatccaa 33995546  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    | ||||| | ||||||||| ||| | |||||||||||||||| ||||||||| |||||||| ||||||||||||| |||||||| |||||||||||||||    
T  33995545 aaaaaagtaatgagaaatggaagcattttaattgaatcatttgaattgcctaaaattctaatttctttaaaatttgtcaattacatcatccaaacacact 33995446  T
Q  215 cttagaatatt 225  Q
    || ||| ||||    
T  33995445 ctaagagtatt 33995435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 22304645 - 22304736
Alignment:
Q  129 aaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 220  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22304645 aaatgaaagtaatttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacacacttaga 22304736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 6771931 - 6771822
Alignment:
Q  108 catccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaa 207  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  6771931 catccaaacagaagtattgagaaatgaaaataatttaattgaatcatttgaattgcatagaattctaaattctttaaaatttcccaattaactcatccaa 6771832  T
Q  208 acacactctt 217  Q
    ||||||||||    
T  6771831 acacactctt 6771822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 37090995 - 37091135
Alignment:
Q  75 caaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattcta 174  Q
    |||||||| ||||||||||       ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||| |||| |||||| |||||    
T  37090995 caaaaatgctgacaatgaaattaattattacttcatccaaacataagtattaagaaatgaaagtaatttaattgaatcattttaattacctagagttcta 37091094  T
Q  175 aattctttaaaatttctcaattacctcatccaaacacactc 215  Q
    |||||||||| ||||  ||||||||||||||||||||||||    
T  37091095 aattctttaagatttaccaattacctcatccaaacacactc 37091135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 28490347 - 28490456
Alignment:
Q  108 catccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattcttt-aaaatttctcaattacctcatcca 206  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||  | ||||||||||||||||    
T  28490347 catccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgccttgaattttaaattctttaaaaaaatttcaattacctcatcca 28490446  T
Q  207 aacacactct 216  Q
    ||||||||||    
T  28490447 aacacactct 28490456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 22303586 - 22303385
Alignment:
Q  19 ccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatccaaaca 117  Q
    ||||||||||| ||||||||||||||||       || |||||||||||||||| ||||||||||||||||| |         |||||| ||||||||||    
T  22303586 ccctaatttcatttttcaaatttggcccaaaaaaattgaaatttataaaagttgcccaaaaatgatgacaataatttttttttattactccatccaaaca 22303487  T
Q  118 aaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 217  Q
    | |  ||| |  |||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  |||||||||||||||||    
T  22303486 ataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactctt 22303387  T
Q  218 ag 219  Q
    ||    
T  22303386 ag 22303385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 13391111 - 13390961
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    ||||||||||||||||||| ||||||||||||||||||||       | |||| |||||||||||||| |||||||||||||||||||||||            
T  13391111 ttaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttagtactccatccaaacaaaagtattgagaaatgaaagtaatttaa-------- 13391020  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 217  Q
         ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13391019 -----attgcttagaattctaaattctttaaaatttcccaattacctcatccaaacacactctt 13390961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 10314998 - 10315196
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||||||||| || ||||||||||||||||        |||||||||||||||||| |||||||| |||||||| |        ||||||||||||||    
T  10314998 tgacccctaattacatttttcaaatttggccccaaaaaaataaaatttataaaagttgcccaaaaat-atgacaataactttttttattacttcatccaa 10315096  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| |  |||||||| |||| ||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  10315097 acaataacatttaagaatgaaagcaattgaattgaatcatttgaattccctataattctaaattcttcaaaatttctcaattaccccatccaaacacact 10315196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 15580115 - 15579996
Alignment:
Q  101 attacttcatccaaacaaaa-gaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta-c 198  Q
    |||||| ||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||||  ||||| |    
T  15580115 attactccatccaaacaaaaagtattgagaaatgaaaggaatttaattgaatcatttaaattgtctagaattttaaattttttaaaatttcctaattacc 15580016  T
Q  199 ctcatccaaacacactctta 218  Q
    ||||||||||||||||||||    
T  15580015 ctcatccaaacacactctta 15579996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 8264833 - 8264996
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    ||||||||||||||||||| ||||||||||||| ||  |        |||||| |||||||||||||| ||||| |||||| ||||||||||||||||||    
T  8264833 ttaaaatttataaaagttggccaaaaatgatgataacaattttttttattactccatccaaacaaaagtattgaaaaatgagagtaatttaattgaatca 8264932  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 217  Q
    |||||||||| ||||||   |||||||||||||    ||||||| |||||||||||||||||||    
T  8264933 tttaaattgcttagaatataaaattctttaaaaaaattcaattagctcatccaaacacactctt 8264996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 212
Target Start/End: Complemental strand, 37241324 - 37241163
Alignment:
Q  55 taaaatttataaaagttgtccaaaaatgatgacaatga----annnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaa 150  Q
    |||||||||||||||||| ||||||||||||||||| |            |||||| ||||||||||| |  ||| ||||||||||  ||||||||||||    
T  37241324 taaaatttataaaagttgcccaaaaatgatgacaataattttttttttttattactccatccaaacaataatatttagaaatgaaaacaatttaattgaa 37241225  T
Q  151 tcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 212  Q
    | |||| ||||  |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  37241224 taatttgaattaactagaattctaaattcttcaaaatttctcaattaccccatccaaacaca 37241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 8255350 - 8255506
Alignment:
Q  55 taaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcat 154  Q
    ||||||| ||||||||||   ||||||||||||||||||       |||||| ||||||||||| |  ||| ||||||||   |||   |||||||||||    
T  8255350 taaaattgataaaagttgctaaaaaatgatgacaatgaaattttgtattactccatccaaacaagaatatttagaaatga---taac--aattgaatcat 8255444  T
Q  155 ttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||| |||| ||||||||| ||||||||||||||| |||||||||||| |||||    
T  8255445 ttaaattgcctaaaattataaattcttcaaaatttctcaattatctcatccaaacatactct 8255506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 35111702 - 35111763
Alignment:
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35111702 aattccctagaattctaaattctttaaaatttctcaattaccccatccaaacacactcttag 35111763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 30519389 - 30519475
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatt 188  Q
    |||||| || ||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  30519389 attactccacccaaacaaaagtattgaaaaatgaaagaaatttaatcgaatcatttaaattgcctaaaatt-taaattctttaaaatt 30519475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 30559729 - 30559815
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatt 188  Q
    |||||| || ||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  30559729 attactccacccaaacaaaagtattgaaaaatgaaagaaatttaatcgaatcatttaaattgcctaaaatt-taaattctttaaaatt 30559815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 25935209 - 25935151
Alignment:
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  25935209 aattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactct 25935151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 17492884 - 17492691
Alignment:
Q  20 cctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaa 119  Q
    ||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||| ||||||||       |||||| || |||||||||    
T  17492884 cctaatttcaattttcaaatttggcc-taaaaaattaaaatttattaaagttgtccaaaaatgataacaatgaaattttttattactccagccaaacaaa 17492786  T
Q  120 agaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattct-aaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |  ||| |||||||||   ||| ||||| ||| |||| |||||| ||  ||||| ||||| ||||||||||   ||||||||||||||||||||||    
T  17492785 aatatttagaaatgaagacaatgtaatttaataatttgaattgctta-tattctaaaattttttaaaattttctaattacctcatccaaacacact 17492691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 38178878 - 38178813
Alignment:
Q  143 taattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 208  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  38178878 taattgattcatttaaattgcctataattctaaattctttaaaattttccaattacctcatccaaa 38178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 38206102 - 38206037
Alignment:
Q  143 taattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 208  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  38206102 taattgattcatttaaattgcctataattctaaattctttaaaattttccaattacctcatccaaa 38206037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 12064378 - 12064318
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  12064378 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 12064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 20320589 - 20320526
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||    
T  20320589 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactcttag 20320526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 40089475 - 40089412
Alignment:
Q  153 atttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||||||||    
T  40089475 atttaaattgcctaggaatctaaattctttaaaatttcctaattacctcatccaaacacactct 40089412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 9893914 - 9893749
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatga---caatgaannn 96  Q
    |||||||||||   || ||| |||||||||||||||||||||||||        ||||||||||| ||||||  |||||||||||||   || ||||       
T  9893914 tgaaatttacaaattggcccataatttcaattttcaaatttggcccaaaaaaaattaaaatttatgaaagtttcccaaaaatgatgatgacattgaaatt 9893815  T
Q  97 nnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattg 162  Q
        |||||| || ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  9893814 ttttattactccacccaaacaaaagtattgaaaaatgaaagaaatttaattgaatcatttaaattg 9893749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 210
Target Start/End: Original strand, 31368294 - 31368395
Alignment:
Q  109 atccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 208  Q
    ||||||| ||||  ||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||| | |||||    ||||||| ||||||||||    
T  31368294 atccaaaaaaaattattgaaaaatgaaagaaatttaattgaatcatttaaattgtttagaattctaaattttataaaaaaattcaattaactcatccaaa 31368393  T
Q  209 ca 210  Q
    ||    
T  31368394 ca 31368395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 31316579 - 31316666
Alignment:
Q  123 attgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaca 210  Q
    ||||| |||||| || ||||||||||||| ||||||||||  |||||||||||||||| ||||| ||  |||||| ||||||||||||    
T  31316579 attgaaaaatgagagaaatttaattgaattatttaaattgtttagaattctaaattctataaaaatttccaattaactcatccaaaca 31316666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 19533827 - 19533769
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||| ||||||||||    
T  19533827 taaattgcctagaattttaaattctttaaaatttccaaattacctcattcaaacacact 19533769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 22302806 - 22302939
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnn 99  Q
    |||||||||||   ||||||||||||||||||||||||| || |||        ||||||||||||||||||| ||||||||||||  ||||||          
T  22302806 tgaaatttacaaattgacccctaatttcaattttcaaatctgaccccctaaaaattaaaatttataaaagttgcccaaaaatgatggtaatgaaattttt 22302905  T
Q  100 nattacttcatccaaacaaaagaattgagaaatg 133  Q
     ||||||  ||||||||||||| |||||||||||    
T  22302906 aattactctatccaaacaaaagtattgagaaatg 22302939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 32317134 - 32317222
Alignment:
Q  127 agaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||  ||||| |||||||| |||| | |||| || |||| ||||||||||||||||| |||||||||| |||||||||| ||||    
T  32317134 agaaatgaagataattcaattgaataatttgacttgcttaaaattttaaattctttaaaattt-tcaattacctaatccaaacactctct 32317222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 37722814 - 37722751
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||||| ||||||||| ||||||||||||||||||  ||||||   ||||||||||||||||||    
T  37722814 taaattacctagaattttaaattctttaaaatttccaaattactcaatccaaacacactcttag 37722751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 18442891 - 18443038
Alignment:
Q  56 aaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatt 155  Q
    |||| ||||||||||||| |||| ||| ||||||||||       | ||||||||||||| ||||  ||| | |||||||   ||||||||||||| |||    
T  18442891 aaaaattataaaagttgttcaaatatgttgacaatgaaattttttactacttcatccaaataaaaatatttaaaaatgaagacaatttaattgaatgatt 18442990  T
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcat 203  Q
    | ||||    ||||||||||||||| ||| ||||| |||||| |||||    
T  18442991 tgaattaatcagaattctaaattctataagatttcacaattatctcat 18443038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 6955073 - 6955020
Alignment:
Q  165 tagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||||| |||||||    
T  6955073 tagaattctaaattcttaaaaatttctcaatccccttatccaaacatactctta 6955020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 40089550 - 40089484
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaat 81  Q
    |||||| |||||||||||||||||||||||||       ||||||||||||||||||| | ||||||    
T  40089550 tgacccttaatttcaattttcaaatttggcccaaaataattaaaatttataaaagttgccaaaaaat 40089484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 7486 - 7688
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||||||||||||           
T  7486 tgaaatttacattttgacccctaatttcaattttcaaatttggcccaaaaaaaataaaatttataaaagttgcccaaaaatgatgacaatgaatattttt 7585  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7586 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 7685  T
Q  201 cat 203  Q
    |||    
T  7686 cat 7688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 8e-77; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 946718 - 946929
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnat 102  Q
    ||||||||||| || ||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||||||||       ||    
T  946718 aaatttacattttgccccctaatttcaattttcaaatttgacccaaaaaa-ttaaaatttataaaagttgtccaaaaatgatgacaatgaatttttt-at 946815  T
Q  103 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 202  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  946816 tacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 946915  T
Q  203 tccaaacacactct 216  Q
    ||||||||||||||    
T  946916 tccaaacacactct 946929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 15467701 - 15467477
Alignment:
Q  1 tgaaatttacattgtgacccc-taatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnn 99  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||        |||||||||||||||||||  |||||||||||||||||||          
T  15467701 tgaaatttacattttgaccccctaatttcaattttcaaatttggcc-taaaaaattaaaatttataaaagttgctcaaaaatgatgacaatgaatttttt 15467603  T
Q  100 nattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15467602 tattacttcattcaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttcttaattacc 15467503  T
Q  200 tcatccaaacacactcttagaatatt 225  Q
    |||||||||||||||||||| |||||    
T  15467502 tcatccaaacacactcttaggatatt 15467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 28632323 - 28632126
Alignment:
Q  19 ccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaa 118  Q
    |||| |||| ||||||||||||||| ||       ||||||||||| ||||||| ||||||||||||||||||||       ||||||||||||||||||    
T  28632323 cccttattttaattttcaaatttgggccaaaaaaattaaaatttattaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaa 28632224  T
Q  119 aagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  28632223 aaaaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattttttataatttctcaattatctcatccaaacacactct 28632126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 32647626 - 32647829
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||        ||||||||||||||||||| |||||||| |||||||||||           
T  32647626 tgaaatttacattttgacccctaatttctgttttcaaatttggccaaaaaaaattaaaatttataaaagttgcccaaaaataatgacaatgaatttgttt 32647725  T
Q  101 -attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 199  Q
     |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  32647726 tattactccatccaaacaaaagtatttagaaatgaaagtaatttaattgaatcatttaaattttctagaattctaaattctttaaaatttctcaattacc 32647825  T
Q  200 tcat 203  Q
    ||||    
T  32647826 tcat 32647829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 41822288 - 41822078
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||| |||||||||||||||||||||| ||        ||||||||||||||||||| ||||||||||||||||||||           
T  41822288 tgaaatttacaaattgacctctaatttcaattttcaaatttgacctaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaaatttttt 41822189  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||| ||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| |    
T  41822188 attactccatccaaacaaaagtattgagaaatgaaagcattttaaatgaattatttaaattgcctagaattctaaattctgtaaaatttctcaattactt 41822089  T
Q  201 catccaaacac 211  Q
    |||||||||||    
T  41822088 catccaaacac 41822078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 6470444 - 6470225
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||||||||||||||| ||||||||||| |||       | ||||||||||||||||| ||||||||||||||| ||||           
T  6470444 tgaaatttacaaattgacccctaatttcaaatttcaaatttgacccaaaaaagtaaaaatttataaaagttgcccaaaaatgatgacagtgaaatattgt 6470345  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattcttt-aaaatttctcaattacc 199  Q
    |||||| |||||||||||||  ||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| ||    
T  6470344 attactccatccaaacaaaactattgaaaaatgaaaataatttaattaaatcatttaaattacctagaattctaaattctttaaaaatttctcaattgcc 6470245  T
Q  200 tcatccaaacacactcttag 219  Q
    ||||||||||||||||||||    
T  6470244 tcatccaaacacactcttag 6470225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 21267505 - 21267343
Alignment:
Q  57 aaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcattt 156  Q
    |||||||||||||||||| ||||||  |||| |||||       |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  21267505 aaatttataaaagttgtctaaaaatattgactatgaaattttttattacttcatacaaacaaaagaattgagaaatgaaagtaatttaattgaatcatct 21267406  T
Q  157 aaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  21267405 aaattgcctataattcgaaattctttaaaatttctcaattatctcatccaaacacactcttag 21267343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 35499384 - 35499601
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||||||||||||||||||||||||||| |||       || |||||||||| | ||| ||||||||||||||||||||           
T  35499384 tgaaatttacaaattgacccctaatttcaattttcaaatttgacccaaaaaaattgaaatttataacaattgcccaaaaatgatgacaatgaatttttt- 35499482  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||   |||||| |    
T  35499483 attactccatccaaataaaagtattgagaaatgaatgtaatttaattgaatcatttaaattatctagaattctaaattctttaaaattttcaaattactt 35499582  T
Q  201 catccaaacacactcttag 219  Q
    |||||||||||||||||||    
T  35499583 catccaaacacactcttag 35499601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 48953894 - 48954097
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||||||||||||||||| || ||||||||       ||||||||| ||||||||||||||||||||||| ||||||       ||||||||||||||    
T  48953894 tgacccctaatttcaatttttaattttggccccaaaaaattaaaatttctaaaagttgtccaaaaatgatgataatgaaattttttattacttcatccaa 48953993  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
     |||||  ||| | ||||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||||||||| |||||||||||| |||    
T  48953994 -caaaaatattaaaaaatgaaagtaatttaattgaatcatttagatagcctaaaactctaaattcttcaaaatttctcaattagctcatccaaacatact 48954092  T
Q  215 cttag 219  Q
    |||||    
T  48954093 cttag 48954097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 32128431 - 32128636
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn-attacttcatcca 113  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||  ||||||||||||||| ||||        |||||| ||  ||    
T  32128431 tgacccctaatttcaattttcaaatttggcccaataaaattaaaatttataaaagttccccaaaaatgatgacattgaaatttttttattactccacgca 32128530  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
     ||||||| |||||||||| |||| ||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||| | |||||||||    
T  32128531 gacaaaagtattgagaaattaaaggaatttaattgaatcattaaaattacctaaaattttaaattctttaaaatttctcaattacctcgttcaaacacac 32128630  T
Q  214 tcttag 219  Q
    ||||||    
T  32128631 tcttag 32128636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 44571540 - 44571738
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||||||||| |||||||| ||||||||||       |||||||||| |||||||| |||||||||||| |||||||       ||| || |||||||    
T  44571540 tgacccctaatt-caattttctaatttggcccaaaaaaattaaaatttacaaaagttgcccaaaaatgatggcaatgaaattttttatttctccatccaa 44571638  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||  |||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||| ||||||||||||| |||||||||    
T  44571639 acaaaaatattgagaaataaaagtaatttaattgaatcgtttaaattacctaggattctaaattctttataatttcccaattacctcatcgaaacacact 44571738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 50472106 - 50472252
Alignment:
Q  57 aaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcattt 156  Q
    |||||||||||||||| |||||||| | ||||||||        |||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  50472106 aaatttataaaagttgcccaaaaataacgacaatgatattttttattactccatccaaacaaaagtattgaaaaatgaaagtaatttaattgaataattt 50472205  T
Q  157 aaattgcctagaattctaaattctttaaaatttctcaattacctcat 203  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||    
T  50472206 aaattgcctaaaattctaaattctttaaaatttctcaattatctcat 50472252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 31166647 - 31166761
Alignment:
Q  103 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatc-atttaaattgcctagaattctaaattctttaaaatttctcaattacctc 201  Q
    |||| ||| |||||||||| |||||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||| ||||||||||||||||     
T  31166647 tactccattcaaacaaaagtattgagaaatgaaagtaatttaatcgaatccatttaaattgactagatttctaaattctttacaatttctcaattacctg 31166746  T
Q  202 atccaaacacactct 216  Q
    |||||||||||||||    
T  31166747 atccaaacacactct 31166761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 41578021 - 41577841
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||||||||||| ||||||||||||||||||       ||||||||||||||||||| |||||||||||||||||||            
T  41578021 tgaaatttacaaattgacccctaattttaattttcaaatttggccccaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgatttttttt 41577922  T
Q  101 att---------acttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattc 172  Q
    |||         |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41577921 attttttttatcacttcatccaaacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattc 41577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 44571027 - 44571224
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||| ||||||||||||||||       || |||||||||||||||| ||||||||||||||||| ||       ||| || |||||||    
T  44571027 tgacccctaatttcatttttcaaatttggcccaaaaaa-ttgaaatttataaaagttgcccaaaaatgatgacaataaatttttttattgctccatccaa 44571125  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    |||| |  ||| |  |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||| |||  |||||||||||||    
T  44571126 acaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattttaaattcttcaaaatttctcaaatactccatccaaacacac 44571224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 10166843 - 10167047
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    |||||||||||||||||||||| ||| ||||        |||||||||||||||||| |||| ||||||||||| ||||       |||| | |||||||    
T  10166843 tgacccctaatttcaattttcatattcggccaaaaaaaattaaaatttataaaagttctccataaatgatgacagtgaatttttttattagtacatccaa 10166942  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| |||||||||   | |||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| ||||| |||  ||    
T  10166943 acaataatatttagaaatgaagacattttaattgaatcatttgaattgcctagaattttaaattctttaaaatttatcaattaccttatccagacattct 10167042  T
Q  215 cttag 219  Q
    |||||    
T  10167043 cttag 10167047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 222
Target Start/End: Original strand, 39887414 - 39887621
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||| |||| |||||||  ||       ||||||||||||||||||| |||||||| ||||||||          ||| || |||||||    
T  39887414 tgacccctaatttcattttttaaatttgatccaaaaaaattaaaatttataaaagttgcccaaaaattatgacaatatttgtttttatttctccatccaa 39887513  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| || |||||||| |||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||  ||||||||||||||    
T  39887514 acaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctaaaattctaaattcttcaaaatttctcaattactccatccaaacacact 39887613  T
Q  215 cttagaat 222  Q
    || |||||    
T  39887614 ctaagaat 39887621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 37447083 - 37446883
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatcca 113  Q
    ||||||||||||||| ||||||||||||||||        ||||||||||||||||||  |||||||| |||||||| |        |||||| ||||||    
T  37447083 tgacccctaatttcatttttcaaatttggcccaaaaaaaattaaaatttataaaagttacccaaaaat-atgacaat-attttgtttattactccatcca 37446986  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    ||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| ||||||| |||||||||||||    
T  37446985 aacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacac 37446886  T
Q  214 tct 216  Q
    |||    
T  37446885 tct 37446883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 37447626 - 37447426
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnntta-aaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatcca 113  Q
    ||||||||||||||| ||||||||||||||||       ||  |||||||||||||||| |||||||||||| |||| ||       |||||| ||||||    
T  37447626 tgacccctaatttca-ttttcaaatttggcccaaaaaatttgcaaatttataaaagttgcccaaaaatgatgccaat-aaattttttattactccatcca 37447529  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    || || |  ||| |  ||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  37447528 aataataatatttaagaataaaagcaatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaaatacttcatccaaacacac 37447429  T
Q  214 tct 216  Q
    |||    
T  37447428 tct 37447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 41481152 - 41480952
Alignment:
Q  19 ccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttg-tccaaaaatgatgacaatgaannnnnnnattacttcatccaaaca 117  Q
    ||||||||| ||||| ||||||||||||        |||||||||||||||||| |  ||||||||||||||||||       ||| |||||||||||      
T  41481152 ccctaattttaatttccaaatttggcccaaataaaataaaatttataaaagttgctaaaaaaatgatgacaatgaaattttttattgcttcatccaaatg 41481053  T
Q  118 aaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 217  Q
    |||| ||||| |||||||| |||||||||||||| |||| || |||||| |||| ||||| ||||||||  | | |||||||||||||||||||||||||    
T  41481052 aaagtattgataaatgaaattaatttaattgaataatttgaactgcctaaaattttaaatgctttaaaaaatttaaattacctcatccaaacacactctt 41480953  T
Q  218 a 218  Q
    |    
T  41480952 a 41480952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 220627 - 220704
Alignment:
Q  141 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  220627 tttaattgaatcatttaaattgcctagaattctaaattctctataatttttcaattacctcatccaaacacactctta 220704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 37036612 - 37036504
Alignment:
Q  108 catccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaa 207  Q
    ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||| |||||||    
T  37036612 catccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttcttaattaccccatccaa 37036513  T
Q  208 acacactct 216  Q
    |||||||||    
T  37036512 acacactct 37036504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 8225119 - 8225324
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn--attacttcatcc 112  Q
    ||||||||||||||| |||||||||||||| |       |||||||||| |||||||| |||||||| ||||||||            ||| || |||||    
T  8225119 tgacccctaatttcatttttcaaatttggcacaaaaaaattaaaatttagaaaagttgcccaaaaattatgacaatattttttagtttatttctccatcc 8225218  T
Q  113 aaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 212  Q
    |||||| |  ||| || |||||||| ||||||||||| |||||| |||| |||| |||||||||||||| ||||||||||||||||  ||||||||||||    
T  8225219 aaacaataatattaaggaatgaaagcaatttaattgattcatttgaattacctaaaattctaaattcttcaaaatttctcaattactccatccaaacaca 8225318  T
Q  213 ctctta 218  Q
    ||||||    
T  8225319 ctctta 8225324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 23956136 - 23955981
Alignment:
Q  61 ttataaaagttgtccaaaaatgatgacaatgaannnnnnn--attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaa 158  Q
    ||||||||||| ||||| |||||||||||||||         |||||| ||| |||||||||  ||| |||||| |||||||||||||||||||||||||    
T  23956136 ttataaaagttatccaataatgatgacaatgaatttttttttattactccattcaaacaaaaatattaagaaataaaagtaatttaattgaatcatttaa 23956037  T
Q  159 attgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| ||| ||||||||||| |||||||||||  |||| |||| |||||| |||||    
T  23956036 attgactaaaattctaaattttttaaaatttcctaattgcctcttccaaatacact 23955981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 47541911 - 47541851
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  47541911 taaattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactct 47541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 37448038 - 37447971
Alignment:
Q  149 aatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||| |||| ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  37448038 aatcatttgaattccctagaattctaaattcatcaaaatttctcaattaccccatccaaacacactct 37447971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 12293080 - 12293022
Alignment:
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||    
T  12293080 aattgcctagaattctaaattctttgagatttcccaattacctcatccaaacacactct 12293022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 4663773 - 4663861
Alignment:
Q  129 aaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    ||||||||| | ||||||||||| |||| ||| || ||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||    
T  4663773 aaatgaaagcattttaattgaataatttgaat-gcttagaattttaaattccttaaaatttgtcaattacctcatccaaacaaactctta 4663861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 24273142 - 24273081
Alignment:
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  24273142 aattgcgtagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttag 24273081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 32202208 - 32202297
Alignment:
Q  123 attgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 212  Q
    ||||||||||||||||||||||||||||||||||||||| | || |||||||||   ||| |||||||  ||||| ||| ||||||||||    
T  32202208 attgagaaatgaaagtaatttaattgaatcatttaaattacttaaaattctaaaaaatttcaaatttccaaattatctcgtccaaacaca 32202297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 31195955 - 31196023
Alignment:
Q  109 atccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaat 177  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||||||  || ||||||||||||    
T  31195955 atccaaacaaaattattgagaaatgaaagtaatttaatagaatcatttaaatcacccagaattctaaat 31196023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 31196903 - 31196953
Alignment:
Q  168 aattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  31196903 aattctaaattctttaaaatttctcaattatctcatcctaacacactctta 31196953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 41822829 - 41822752
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||||| |||| |||| |||||||||||||| ||||||||| || |||  || |||||||||||||    
T  41822829 aatttaattgaatcatttgaattacctataattctaaattcttcaaaatttcttaaatactccacccaaacacactct 41822752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 208
Target Start/End: Complemental strand, 52135070 - 52134877
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaat-gaannnnnnn-attacttcatcc 112  Q
    ||||||||| ||||||||||||||||| ||||       | ||||||||||||||| ||||||||||  ||||||| |||        |||| |||||||    
T  52135070 tgacccctattttcaattttcaaatttagccccaaaaaat-aaaatttataaaagtagtccaaaaatattgacaatagaattttttttattagttcatcc 52134972  T
Q  113 aaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 208  Q
    ||||||||  ||  | ||||||| ||||||||||||| | |||| |||||| || ||||||||||| |||||||  | |||||||| |||||||||    
T  52134971 aaacaaaaatatctaaaaatgaatgtaatttaattgagttatttgaattgcttaaaattctaaattatttaaaaaat-tcaattacatcatccaaa 52134877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 13182107 - 13182163
Alignment:
Q  155 ttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacac 211  Q
    |||||||||||| ||||  ||||||||| ||||||||||||| ||||||||||||||    
T  13182107 ttaaattgcctaaaatttcaaattcttttaaatttctcaattgcctcatccaaacac 13182163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 26501002 - 26500947
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacac 211  Q
    |||||| ||||||||| |||||||||||||||||   |||||||||||||||||||    
T  26501002 taaattacctagaattttaaattctttaaaattttcaaattacctcatccaaacac 26500947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 47165135 - 47165072
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    |||||| |||| |||| |||||||||||||||||   |||||||||||||||||||||| ||||    
T  47165135 taaattacctaaaattttaaattctttaaaattttcaaattacctcatccaaacacactgttag 47165072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 23969591 - 23969439
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatca 153  Q
    |||||| ||||||||| || ||||||||||||||||||||       ||| || ||| ||||||| |  ||| ||||||||| |||||||||||||||      
T  23969591 ttaaaacttataaaagatg-ccaaaaatgatgacaatgaatatttttattcctccatacaaacaataatatttagaaatgaatgtaatttaattgaat-- 23969495  T
Q  154 tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
           ||| || |||| ||||||||||||||  | ||||||||| ||||||||||||||||    
T  23969494 -------tgcttataattttaaattctttaaaaaatttcaattaccccatccaaacacactct 23969439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 14406154 - 14406086
Alignment:
Q  110 tccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaatt 178  Q
    |||||| ||||  ||| |||||| |||| |||| |||||||||||||||||| |||| |||||||||||    
T  14406154 tccaaataaaaacatttagaaataaaagaaattcaattgaatcatttaaattacctaaaattctaaatt 14406086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 45359030 - 45358975
Alignment:
Q  157 aaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 212  Q
    |||||||||| |||||||||||||||||||    |||||| |||||||||||||||    
T  45359030 aaattgcctataattctaaattctttaaaaaaattcaatttcctcatccaaacaca 45358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 34003858 - 34003904
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaa 185  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||    
T  34003858 aatttaattgaatcatttaaactgtctataattctacattctttaaa 34003904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 32288049 - 32288012
Alignment:
Q  181 ttaaaatttctcaattacctcatccaaacacactctta 218  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  32288049 ttaaaatttctcaattaccacatccaaacagactctta 32288012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 41822887 - 41822854
Alignment:
Q  57 aaatttataaaagttgtccaaaaatgatgacaat 90  Q
    |||||||||||||||| |||||||||||||||||    
T  41822887 aaatttataaaagttgcccaaaaatgatgacaat 41822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47074272 - 47074317
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggccc 46  Q
    |||||||||||   |||||| |||||||||||||||||||||||||    
T  47074272 tgaaatttacaaattgacccttaatttcaattttcaaatttggccc 47074317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 1e-75; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 8475466 - 8475678
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnat 102  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||       |||||||||||||||| |||||||||||||||||||||||       ||    
T  8475466 aaatttacattttgaccc-taatttcaattttcaaatttgacccaaaaaaattaaaatttataaaagctgtccaaaaatgatgacaatgaatttttttat 8475564  T
Q  103 tacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 202  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8475565 tactttatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 8475664  T
Q  203 tccaaacacactct 216  Q
    || |||||||||||    
T  8475665 tctaaacacactct 8475678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 1368861 - 1369027
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn--attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaat 151  Q
    |||||| |||||||||||| ||||||||||||||||||||         |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  1368861 ttaaaacttataaaagttgcccaaaaatgatgacaatgaatttttttttattactccatccaaacaaaagaattcagaaatgaaagtaatttaattgaat 1368960  T
Q  152 catttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1368961 catttaaattacctagaattttaaattctttataatttctcaattacctcgtccaaacacactctta 1369027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 28918504 - 28918706
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatcca 113  Q
    ||||||||||||||| |||| |||||||||||        |||||| |||||||||||||||||||||||||||||| ||       |||||| ||||||    
T  28918504 tgacccctaatttcattttttaaatttggcccaaaaaaaattaaaacttataaaagttgtccaaaaatgatgacaataaatttttttattactccatcca 28918603  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||| |  || ||||||||    
T  28918604 aacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcatagaattttaaattatttataatttctcaattactttgtctaaacacac 28918703  T
Q  214 tct 216  Q
    |||    
T  28918704 tct 28918706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 10105342 - 10105556
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   |||| ||||||||||||||||||||||| |||       |  |||||||||||||||| | | ||||||||||||||||           
T  10105342 tgaaatttacaaattgactcctaatttcaattttcaaatttgacccaaaaatat--aaatttataaaagttgccaagaaatgatgacaatgaaattttgt 10105439  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    ||||||  ||||||||||||| ||||||||||||||  | |||||||||||||||  ||||||||| || ||||||||||||||||||||||||||||||    
T  10105440 attactcaatccaaacaaaagtattgagaaatgaaatcattttaattgaatcattggaattgcctacaagtctaaattctttaaaatttctcaattacct 10105539  T
Q  201 catccaaacacactctt 217  Q
    |||||||||||||||||    
T  10105540 catccaaacacactctt 10105556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 15616077 - 15615920
Alignment:
Q  58 aatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcattta 157  Q
    |||||||||||||| ||  ||||||||||||||| |       |||||| |||||||||||||  ||||||||||||||||||||||||||| ||||||     
T  15616077 aatttataaaagtt-tctcaaaatgatgacaatggaattttttattactccatccaaacaaaaatattgagaaatgaaagtaatttaattgattcatttg 15615979  T
Q  158 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  15615978 aattgcctaatattttaaattctttaaaatttatcaattacctcatccaaacacactct 15615920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 6357932 - 6357825
Alignment:
Q  109 atccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 208  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||||||||||| | || |||||||||||||| |||||||| |||||||||| ||||||    
T  6357932 atccaaacaaaagtattaagaaatgaaaataatttaattgaatcatttaaattacttaaaattctaaattcttcaaaatttcccaattacctcgtccaaa 6357833  T
Q  209 cacactct 216  Q
    ||||||||    
T  6357832 cacactct 6357825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 31413248 - 31413412
Alignment:
Q  55 taaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcat 154  Q
    |||||||||||||||||| ||||||||||||||||| ||       |||||||||||||||||| |  ||| |  ||| |||| || | |||| ||||||    
T  31413248 taaaatttataaaagttgcccaaaaatgatgacaataaatttttttattacttcatccaaacaataacatttaagaattaaagcaactgaatttaatcat 31413347  T
Q  155 ttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 219  Q
    || |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  31413348 ttgaattccctagaattctaaattcttcaaaatttctcaattaccccatccaaacacacttttag 31413412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 724904 - 724811
Alignment:
Q  123 attgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    ||||||||||||||| | ||| ||| |||||||| |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  724904 attgagaaatgaaagcattttcatttaatcatttgaattacctagaattctaaattcttaaaaaattctcaattacctcatccaaacacactct 724811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 1195766 - 1195853
Alignment:
Q  129 aaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||| |||| ||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||| ||||||||||||    
T  1195766 aaataaaagcaatttaattgaattatttaaattgcctagaatttcaaattctctaaaatttctcaattacctcattcaaacacactct 1195853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 34244903 - 34244837
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 222  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  34244903 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttagaat 34244837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 15832962 - 15833154
Alignment:
Q  22 taatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaaacaaaag 121  Q
    |||||||| |||| |||||||||||       ||||||||||||||||||| |||||||| ||||||||          ||| || ||||||||| | |     
T  15832962 taatttcattttttaaatttggcccagaaaaattaaaatttataaaagttgcccaaaaattatgacaatattttttttgatttctacatccaaactataa 15833061  T
Q  122 aattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
     ||| |  |||||||| ||||||||| |||||||| |||| |||| |||||| ||||||| ||||||||||||||||  ||||||||||||||    
T  15833062 tatttaagaatgaaagcaatttaattaaatcatttgaattacctaaaattctgaattcttcaaaatttctcaattactccatccaaacacact 15833154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 13487425 - 13487487
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 218  Q
    ||||||| |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  13487425 taaattgtctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctta 13487487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 34364894 - 34364954
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||    
T  34364894 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactct 34364954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 9697874 - 9697937
Alignment:
Q  153 atttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 216  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  9697874 atttaaattatctaaaattctaaattctttaaaatttctcaattactccatccaaacacactct 9697937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 26855578 - 26855480
Alignment:
Q  112 caaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacac 211  Q
    |||||||||||||| | ||||||||| |||||    ||||||||| |  || ||| | |||||||||||| ||||||||||||||| ||||| |||||||    
T  26855578 caaacaaaagaatttataaatgaaagcaattt----gaatcatttgatatgtctaaatttctaaattcttcaaaatttctcaattatctcattcaaacac 26855483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 29889355 - 29889294
Alignment:
Q  158 aattgcctagaattctaaattctttaaaatttctcaa-ttacctcatccaaacacactctta 218  Q
    |||||||||||||| ||||||||||||||  | |||| ||||||||||||||||||||||||    
T  29889355 aattgcctagaattttaaattctttaaaaaatttcaaattacctcatccaaacacactctta 29889294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 26901447 - 26901343
Alignment:
Q  108 catccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaa 207  Q
    |||||||||||||  ||| ||||| ||||  |||||| ||||||||||| ||||||||||||||| |||   || ||||  | |||||||| ||||||||    
T  26901447 catccaaacaaaaatatttagaaaagaaaaaaatttatttgaatcatttgaattgcctagaattcaaaaaaattcaaaaaatttcaattacttcatccaa 26901348  T
Q  208 acaca 212  Q
    |||||    
T  26901347 acaca 26901343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 1195669 - 1195746
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaa 93  Q
    ||||||| ||||||||||||||||||||| ||       |||||| |||||||| ||| ||||||||||| ||||||||    
T  1195669 tgaccccaaatttcaattttcaaatttggtccaaaaaaattaaaaattataaaatttgcccaaaaatgat-acaatgaa 1195746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 9697817 - 9697853
Alignment:
Q  54 ttaaaatttataaaagttgtccaaaaatgatgacaat 90  Q
    |||||||||||||||| |||||||||||||| |||||    
T  9697817 ttaaaatttataaaagctgtccaaaaatgataacaat 9697853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 3205 - 3407
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||| |  ||||||||||||| ||||||       ||||||||||||||    
T  3205 tgacccctaatttcaattttcaaatttggccctaaaaagttaaaatttataaaaggttcccaaaaatgatgataatgaaattttttattacttcatccaa 3304  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  3305 acaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattaactaaaattctaaattctttaaaatttctcaattacctcatccaaagacact 3404  T
Q  215 ctt 217  Q
    |||    
T  3405 ctt 3407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 19508 - 19333
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||| || ||||||||||||||||||||       |||||| |||||||    
T  19508 tgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagctgcccaaaaatgatgacaatgaaattttttattactccatccaa 19409  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttc 190  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19408 acaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttc 19333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 4357 - 4568
Alignment:
Q  1 tgaaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnn 100  Q
    |||||||||||   ||||||||||||| |||||||||||||| |||       |||||   ||||||||||| ||||||||||||||||||||           
T  4357 tgaaatttacaaattgacccctaattttaattttcaaatttgacccaaaaaa-ttaaa---tataaaagttgcccaaaaatgatgacaatgaaatttttg 4452  T
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  4453 attactccatccaaacaaaagtattgagaaatgaaagcattttaaatgaatcatttaaattgcctagaattctaaattctttaaaatttcccaattagtt 4552  T
Q  201 catccaaacacactct 216  Q
    ||||||||||||||||    
T  4553 catccaaacacactct 4568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 218
Target Start/End: Complemental strand, 4222 - 4018
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatcca 113  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||| ||       |||||| ||||||    
T  4222 tgacccctaatttcaattttcaaatttggccctctaaaaattaaaatttataaaagttgcccaaaaatgatgacaataaatttttttattactccatcca 4123  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    ||||| |  ||| |  |||||||| |||||||||||||||||| |||  ||||||||||||||||||| ||||  | |||| |||  |||||||||||||    
T  4122 aacaataatatttaagaatgaaagcaatttaattgaatcatttgaataacctagaattctaaattcttcaaaaaatttcaaatactccatccaaacacac 4023  T
Q  214 tctta 218  Q
    |||||    
T  4022 tctta 4018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 218
Target Start/End: Complemental strand, 4866 - 4662
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnn-ttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatcca 113  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||| ||       |||||| ||||||    
T  4866 tgacccctaatttcaattttcaaatttggccctctaaaaattaaaatttataaaagttgcccaaaaatgatgacaataaatttttttattactccatcca 4767  T
Q  114 aacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 213  Q
    ||||| |  ||| |  |||||||| |||||||||||||||||| |||  ||||||||||||||||||| ||||  | |||| |||  |||||||||||||    
T  4766 aacaataatatttaagaatgaaagcaatttaattgaatcatttgaataacctagaattctaaattcttcaaaaaatttcaaatactccatccaaacacac 4667  T
Q  214 tctta 218  Q
    |||||    
T  4666 tctta 4662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 11611 - 11499
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||| ||||||||| ||||| ||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||  ||| |||||    
T  11611 attactccatctaaacaaaagtattgacaaatgaaagtaatttaattaaatcatttaaattacttagaattctaaattctttaaaattttccaaatacct 11512  T
Q  201 catccaaacacac 213  Q
    |||||||||||||    
T  11511 catccaaacacac 11499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 50037 - 49838
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||| | ||||||||||||||||       ||||||||||||||||||| |||||||| ||||||||          ||| || |||||||    
T  50037 tgacccctaattttatttttcaaatttggccccaaaaaattaaaatttataaaagttgcccaaaaattatgacaatatttgtttctatttctccatccaa 49938  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 214  Q
    |||| |  ||| || ||||||| ||||||||||||||||||| | || |||  |||||||||||||| ||||||||||||||||  ||||||||||||||    
T  49937 acaataatatttaggaatgaaattaatttaattgaatcatttgagttaccttaaattctaaattcttcaaaatttctcaattactccatccaaacacact 49838  T

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Target: scaffold0014 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 223518 - 223398
Alignment:
Q  3 aaatttacattgtgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnat 102  Q
    ||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||| ||||||| ||||||||||||||||||||       ||    
T  223518 aaatttacattttgacccctaatttcaattttcaaatttggcccaaaaatattaaaatttat-aaagttgcccaaaaatgatgacaatgaatttttttat 223420  T
Q  103 tacttcatccaaacaaaagaat 124  Q
    ||||||||||||||||||||||    
T  223419 tacttcatccaaacaaaagaat 223398  T

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Target: scaffold0337 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 15601 - 15500
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| || ||||||||||| || |||||||||||| ||||| |||||||||||||||| | |||||||| |||||||||||||||||| |||||||||    
T  15601 attactccacccaaacaaaagtatcgagaaatgaaaggaattttattgaatcatttaaatagtctagaattttaaattctttaaaatttcacaattacct 15502  T
Q  201 ca 202  Q
    ||    
T  15501 ca 15500  T

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Target: scaffold0337; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 16136 - 15959
Alignment:
Q  15 tgacccctaatttcaattttcaaatttggcccnnnnnnnttaaaatttataaaagttgtccaaaaatgatgacaatgaannnnnnnattacttcatccaa 114  Q
    ||||||||||||| | ||||||||||||||||       || ||||||||||  ||||  ||||||| |||||||| ||       ||||||  ||||||    
T  16136 tgacccctaattttatttttcaaatttggcccaaaaaatttgaaatttataa--gttgcgcaaaaataatgacaataaaagtttttattactcaatccaa 16039  T
Q  115 acaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaa 194  Q
    |||| |  ||| |  |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  16038 acaataatatttaagaatgaaagcaatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaa 15959  T

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Target: scaffold0065 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 2643 - 2542
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| || ||||||||||| || |||||||||||| ||||| |||||||||||||||| | |||||||| |||||||||||||||||| |||||||||    
T  2643 attactccacccaaacaaaagtatcgagaaatgaaaggaattttattgaatcatttaaatagtctagaattttaaattctttaaaatttcacaattacct 2544  T
Q  201 ca 202  Q
    ||    
T  2543 ca 2542  T

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Target: scaffold0065; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 3056 - 3001
Alignment:
Q  139 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaa 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  3056 aatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaa 3001  T

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Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 130682 - 130793
Alignment:
Q  101 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 200  Q
    |||||| |||| ||||||||  ||| | |||| | || |||||||||||||||||||||||| ||| |||||||||||||| |||||||  || ||||||    
T  130682 attactccatcgaaacaaaaatatttaaaaataacagaaatttaattgaatcatttaaattggctaaaattctaaattcttcaaaattttccatttacct 130781  T
Q  201 catccaaacaca 212  Q
    ||| ||||||||    
T  130782 catacaaacaca 130793  T

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Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 11319 - 11378
Alignment:
Q  156 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 215  Q
    ||||||||||| |||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  11319 taaattgcctaaaattttaaattctttacaatttccaaattacctcatccaaacacactc 11378  T

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