View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1944_low_62 (Length: 231)
Name: NF1944_low_62
Description: NF1944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1944_low_62 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 219
Target Start/End: Original strand, 39350551 - 39350753
Alignment:
| Q |
17 |
acttacgttaatggattattaggtcaaaattctaatgagaatcaccaaccagttatggttcaaaaagctcctcttcctaacgaggttccaaaggattttg |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39350551 |
acttacgttaatggattattaggtcaaaattctaatgagaatcaccaaccagttatggttcaaaaagctcctcttcctaacgaggttccaaaggattttg |
39350650 |
T |
|
| Q |
117 |
agaattactcttctagtaagtgttttttctctacttcactttaatttgtaacatgatgattgcattactctttcatcaaaactatgcattccatttcatt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39350651 |
agaattactcttctagtaagtgttttttctctacttcactttaatttgtaacatgatgattgcattactctttcatcaaaactatgcattccatttcatt |
39350750 |
T |
|
| Q |
217 |
tca |
219 |
Q |
| |
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||| |
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| T |
39350751 |
tca |
39350753 |
T |
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