View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19450_high_3 (Length: 568)

Name: NF19450_high_3
Description: NF19450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19450_high_3
NF19450_high_3
[»] chr3 (70 HSPs)
chr3 (23-485)||(1441217-1441694)
chr3 (261-365)||(3845201-3845305)
chr3 (267-365)||(39256567-39256665)
chr3 (298-365)||(51285451-51285518)
chr3 (122-208)||(31708163-31708249)
chr3 (287-365)||(52925726-52925804)
chr3 (268-365)||(584888-584985)
chr3 (280-363)||(1290675-1290758)
chr3 (290-365)||(3776431-3776506)
chr3 (267-364)||(5046171-5046268)
chr3 (137-208)||(31013093-31013164)
chr3 (140-208)||(3776597-3776665)
chr3 (125-208)||(30958111-30958195)
chr3 (125-208)||(30973923-30974007)
chr3 (223-315)||(41115413-41115505)
chr3 (125-208)||(40339301-40339384)
chr3 (270-337)||(54596738-54596805)
chr3 (131-189)||(24916578-24916636)
chr3 (295-365)||(34867309-34867379)
chr3 (215-364)||(35058253-35058403)
chr3 (131-208)||(7262889-7262966)
chr3 (267-360)||(7717468-7717561)
chr3 (215-359)||(5406804-5406948)
chr3 (114-197)||(7012670-7012754)
chr3 (140-204)||(14022052-14022116)
chr3 (125-193)||(31766174-31766242)
chr3 (136-200)||(32523272-32523336)
chr3 (140-208)||(42484442-42484509)
chr3 (125-208)||(584720-584803)
chr3 (140-212)||(5406975-5407043)
chr3 (217-367)||(7298361-7298511)
chr3 (266-321)||(8801886-8801941)
chr3 (217-315)||(32523385-32523484)
chr3 (125-204)||(35264338-35264417)
chr3 (137-204)||(37334973-37335040)
chr3 (126-205)||(52925551-52925630)
chr3 (125-207)||(25129466-25129548)
chr3 (138-208)||(35253407-35253477)
chr3 (215-365)||(35264454-35264604)
chr3 (152-206)||(41591307-41591361)
chr3 (263-317)||(50321849-50321903)
chr3 (215-312)||(40736580-40736677)
chr3 (159-208)||(41596110-41596159)
chr3 (125-186)||(46943247-46943308)
chr3 (267-364)||(48410907-48411004)
chr3 (218-314)||(7717367-7717462)
chr3 (268-312)||(33548188-33548232)
chr3 (270-326)||(38332635-38332691)
chr3 (264-312)||(43987644-43987692)
chr3 (305-365)||(52363957-52364017)
chr3 (264-358)||(21007732-21007827)
chr3 (287-366)||(38022328-38022407)
chr3 (266-317)||(46943111-46943162)
chr3 (267-361)||(829786-829879)
chr3 (268-365)||(2410026-2410124)
chr3 (287-365)||(7262790-7262868)
chr3 (223-280)||(23290269-23290327)
chr3 (135-177)||(44958579-44958621)
chr3 (287-321)||(44958721-44958755)
chr3 (140-210)||(49526683-49526753)
chr3 (157-205)||(1290804-1290853)
chr3 (222-279)||(7742193-7742250)
chr3 (267-336)||(12674934-12675003)
chr3 (243-312)||(47356316-47356385)
chr3 (152-205)||(51285648-51285701)
chr3 (152-208)||(1114913-1114969)
chr3 (133-197)||(21023222-21023286)
chr3 (171-211)||(25359547-25359587)
chr3 (140-208)||(46853476-46853544)
chr3 (294-362)||(48089819-48089887)
[»] scaffold0168 (1 HSPs)
scaffold0168 (220-365)||(31718-31863)
[»] chr8 (59 HSPs)
chr8 (132-252)||(10368000-10368116)
chr8 (215-316)||(32927833-32927934)
chr8 (125-208)||(32927967-32928050)
chr8 (243-365)||(35495152-35495274)
chr8 (140-212)||(16972006-16972078)
chr8 (217-321)||(37684341-37684445)
chr8 (244-316)||(42455853-42455925)
chr8 (263-362)||(7533696-7533791)
chr8 (125-208)||(26100073-26100156)
chr8 (124-206)||(35495067-35495149)
chr8 (267-365)||(41614736-41614834)
chr8 (215-362)||(44141093-44141247)
chr8 (267-326)||(8252728-8252786)
chr8 (137-208)||(8700911-8700982)
chr8 (153-208)||(38335816-38335871)
chr8 (263-365)||(4554226-4554328)
chr8 (261-323)||(5997372-5997434)
chr8 (215-321)||(13384697-13384803)
chr8 (131-201)||(36447681-36447751)
chr8 (217-301)||(26100191-26100276)
chr8 (269-362)||(39648242-39648335)
chr8 (125-193)||(1373081-1373149)
chr8 (243-362)||(8700754-8700870)
chr8 (135-212)||(32994177-32994256)
chr8 (225-320)||(7644502-7644596)
chr8 (137-208)||(9461478-9461548)
chr8 (222-312)||(11791783-11791874)
chr8 (268-363)||(32056259-32056353)
chr8 (217-331)||(26668478-26668592)
chr8 (215-320)||(4662946-4663050)
chr8 (127-180)||(7601880-7601933)
chr8 (267-316)||(12742227-12742276)
chr8 (257-362)||(24776178-24776283)
chr8 (293-365)||(30251630-30251702)
chr8 (154-206)||(32809784-32809836)
chr8 (270-318)||(32994322-32994370)
chr8 (303-363)||(34732038-34732098)
chr8 (293-365)||(36448006-36448078)
chr8 (277-364)||(4554399-4554486)
chr8 (154-205)||(4554584-4554635)
chr8 (270-317)||(18355928-18355975)
chr8 (138-197)||(19649224-19649283)
chr8 (298-365)||(28445024-28445091)
chr8 (215-318)||(36200175-36200278)
chr8 (267-365)||(38875358-38875456)
chr8 (269-315)||(4336343-4336389)
chr8 (298-360)||(5218993-5219055)
chr8 (217-318)||(38868436-38868538)
chr8 (215-312)||(463156-463253)
chr8 (143-208)||(2778588-2778653)
chr8 (131-208)||(4950558-4950635)
chr8 (264-317)||(7720117-7720170)
chr8 (140-208)||(7720257-7720328)
chr8 (135-208)||(18123301-18123374)
chr8 (288-365)||(32767275-32767352)
chr8 (215-252)||(35494995-35495032)
chr8 (126-191)||(36779435-36779500)
chr8 (171-208)||(37684480-37684517)
chr8 (153-205)||(4402898-4402949)
[»] chr6 (67 HSPs)
chr6 (217-365)||(5724675-5724823)
chr6 (217-365)||(10400740-10400889)
chr6 (215-326)||(1485189-1485301)
chr6 (215-318)||(765429-765532)
chr6 (266-363)||(31812203-31812300)
chr6 (268-365)||(33136579-33136675)
chr6 (215-365)||(4910800-4910950)
chr6 (219-320)||(26280542-26280643)
chr6 (268-365)||(29240548-29240645)
chr6 (215-311)||(35098501-35098597)
chr6 (215-314)||(6654133-6654232)
chr6 (215-334)||(7952752-7952871)
chr6 (290-361)||(34620782-34620853)
chr6 (290-361)||(34748219-34748290)
chr6 (237-321)||(2008403-2008487)
chr6 (290-357)||(33997098-33997165)
chr6 (217-358)||(25195411-25195550)
chr6 (147-211)||(25195126-25195189)
chr6 (144-208)||(34620961-34621025)
chr6 (144-208)||(34748398-34748462)
chr6 (125-208)||(46215-46298)
chr6 (125-208)||(1499975-1500058)
chr6 (261-323)||(26550453-26550515)
chr6 (126-208)||(31305775-31305857)
chr6 (135-196)||(765322-765383)
chr6 (135-208)||(3289820-3289892)
chr6 (152-208)||(434191-434247)
chr6 (140-208)||(882761-882829)
chr6 (273-321)||(2002566-2002614)
chr6 (140-204)||(3798979-3799043)
chr6 (220-320)||(7280427-7280527)
chr6 (301-365)||(24974107-24974171)
chr6 (153-208)||(8856382-8856437)
chr6 (287-326)||(31305965-31306004)
chr6 (257-319)||(6653747-6653809)
chr6 (268-362)||(7262966-7263060)
chr6 (126-208)||(7952643-7952725)
chr6 (220-282)||(16540082-16540144)
chr6 (290-356)||(34063233-34063299)
chr6 (125-186)||(7953080-7953141)
chr6 (215-359)||(33141749-33141893)
chr6 (126-199)||(34073460-34073533)
chr6 (125-181)||(29937595-29937651)
chr6 (138-194)||(35098398-35098454)
chr6 (261-360)||(579124-579223)
chr6 (267-306)||(2234309-2234348)
chr6 (270-365)||(6896030-6896125)
chr6 (290-365)||(7952444-7952519)
chr6 (270-309)||(18690620-18690659)
chr6 (124-203)||(26692424-26692503)
chr6 (140-195)||(28466926-28466981)
chr6 (140-195)||(34736752-34736807)
chr6 (140-206)||(34911022-34911085)
chr6 (166-208)||(8860579-8860621)
chr6 (153-207)||(25208702-25208756)
chr6 (222-323)||(578864-578965)
chr6 (125-206)||(3525002-3525083)
chr6 (135-192)||(19260820-19260877)
chr6 (276-360)||(19601714-19601799)
chr6 (171-208)||(25195339-25195376)
chr6 (274-335)||(30926881-30926942)
chr6 (268-312)||(957701-957745)
chr6 (270-318)||(1499805-1499853)
chr6 (125-181)||(2234616-2234672)
chr6 (154-206)||(8854997-8855048)
chr6 (140-180)||(34026427-34026467)
chr6 (132-208)||(34027351-34027427)
[»] chr1 (73 HSPs)
chr1 (217-364)||(6021695-6021844)
chr1 (217-318)||(28083933-28084034)
chr1 (134-208)||(5268294-5268368)
chr1 (287-365)||(15478116-15478194)
chr1 (249-365)||(49079291-49079407)
chr1 (267-326)||(24587840-24587899)
chr1 (267-362)||(31117370-31117465)
chr1 (137-208)||(7524188-7524259)
chr1 (217-362)||(12655139-12655285)
chr1 (268-362)||(32088669-32088763)
chr1 (126-208)||(35961443-35961525)
chr1 (267-361)||(41516883-41516977)
chr1 (215-321)||(47321950-47322055)
chr1 (131-207)||(15515002-15515078)
chr1 (254-326)||(37131865-37131937)
chr1 (215-318)||(47892431-47892534)
chr1 (267-322)||(49824824-49824879)
chr1 (215-301)||(3016119-3016204)
chr1 (125-195)||(3515895-3515965)
chr1 (303-365)||(20721046-20721108)
chr1 (124-197)||(4347028-4347101)
chr1 (125-206)||(11817244-11817325)
chr1 (156-205)||(27849218-27849267)
chr1 (125-206)||(28267837-28267917)
chr1 (152-208)||(34915141-34915197)
chr1 (267-310)||(646127-646170)
chr1 (267-326)||(9939823-9939882)
chr1 (217-259)||(11049248-11049290)
chr1 (268-362)||(18325187-18325281)
chr1 (215-326)||(31362248-31362355)
chr1 (238-312)||(37522976-37523050)
chr1 (268-365)||(3819566-3819663)
chr1 (290-359)||(8381882-8381951)
chr1 (125-186)||(13344838-13344899)
chr1 (139-208)||(35681992-35682060)
chr1 (125-206)||(45660533-45660613)
chr1 (159-208)||(48548975-48549024)
chr1 (171-208)||(49216780-49216817)
chr1 (215-252)||(51500877-51500914)
chr1 (304-364)||(8130851-8130911)
chr1 (132-208)||(18325323-18325399)
chr1 (285-365)||(45660862-45660941)
chr1 (287-326)||(6041623-6041662)
chr1 (170-205)||(32370003-32370038)
chr1 (153-200)||(33693085-33693132)
chr1 (217-320)||(34387738-34387841)
chr1 (215-321)||(36780159-36780266)
chr1 (139-186)||(47053508-47053555)
chr1 (292-362)||(6744536-6744606)
chr1 (135-209)||(15477944-15478018)
chr1 (290-320)||(20720753-20720783)
chr1 (137-207)||(34875028-34875098)
chr1 (140-198)||(47725175-47725233)
chr1 (140-198)||(47732167-47732225)
chr1 (125-187)||(47899349-47899411)
chr1 (163-208)||(213246-213291)
chr1 (159-208)||(1233380-1233429)
chr1 (224-313)||(1514288-1514376)
chr1 (264-320)||(14515375-14515432)
chr1 (135-208)||(52339665-52339738)
chr1 (270-326)||(2099784-2099840)
chr1 (125-212)||(5407879-5407967)
chr1 (140-208)||(6932126-6932194)
chr1 (301-365)||(14105035-14105099)
chr1 (143-207)||(18325053-18325117)
chr1 (155-207)||(23052138-23052190)
chr1 (290-322)||(23052399-23052431)
chr1 (152-204)||(28024539-28024591)
chr1 (140-208)||(28083831-28083898)
chr1 (136-192)||(29759710-29759766)
chr1 (290-326)||(30557447-30557483)
chr1 (172-208)||(30557577-30557613)
chr1 (297-365)||(52013602-52013670)
[»] chr7 (54 HSPs)
chr7 (140-208)||(45557440-45557508)
chr7 (125-208)||(40491653-40491736)
chr7 (270-360)||(38123746-38123836)
chr7 (135-212)||(1442642-1442719)
chr7 (267-324)||(12306667-12306724)
chr7 (270-335)||(17111797-17111862)
chr7 (140-205)||(33853426-33853491)
chr7 (140-208)||(12306798-12306866)
chr7 (267-321)||(12306913-12306967)
chr7 (267-365)||(15050185-15050282)
chr7 (139-208)||(38123607-38123676)
chr7 (215-312)||(41386858-41386955)
chr7 (267-336)||(45004906-45004975)
chr7 (114-178)||(39734628-39734692)
chr7 (227-310)||(24951156-24951239)
chr7 (215-317)||(40491518-40491620)
chr7 (154-208)||(40561714-40561768)
chr7 (126-212)||(40795917-40796003)
chr7 (140-197)||(29829311-29829368)
chr7 (225-326)||(36270911-36271012)
chr7 (140-204)||(17111924-17111988)
chr7 (145-208)||(25156275-25156338)
chr7 (161-212)||(26023883-26023934)
chr7 (298-364)||(598071-598137)
chr7 (126-208)||(23140340-23140422)
chr7 (293-365)||(883345-883418)
chr7 (293-365)||(1242674-1242747)
chr7 (270-315)||(41788260-41788305)
chr7 (267-312)||(45004965-45005010)
chr7 (268-326)||(5267774-5267834)
chr7 (220-312)||(5489894-5489986)
chr7 (266-334)||(7087386-7087454)
chr7 (217-337)||(22195784-22195904)
chr7 (140-208)||(27571937-27572005)
chr7 (126-186)||(44856719-44856779)
chr7 (126-197)||(15311203-15311274)
chr7 (154-209)||(18350120-18350175)
chr7 (215-322)||(27571797-27571904)
chr7 (163-202)||(42344655-42344694)
chr7 (137-208)||(44365541-44365612)
chr7 (267-317)||(18228105-18228155)
chr7 (266-352)||(22310760-22310846)
chr7 (225-326)||(26984533-26984635)
chr7 (270-320)||(28430288-28430338)
chr7 (136-206)||(32697637-32697707)
chr7 (154-204)||(41010035-41010085)
chr7 (270-312)||(48158836-48158878)
chr7 (287-364)||(48253061-48253136)
chr7 (126-195)||(28070788-28070857)
chr7 (141-202)||(29842167-29842227)
chr7 (296-365)||(46325567-46325636)
chr7 (140-208)||(3141014-3141082)
chr7 (125-185)||(42481817-42481877)
chr7 (126-186)||(48868499-48868559)
[»] chr4 (74 HSPs)
chr4 (215-321)||(35064999-35065105)
chr4 (267-365)||(2635055-2635153)
chr4 (225-315)||(25318989-25319080)
chr4 (217-311)||(33560615-33560710)
chr4 (270-365)||(49138933-49139028)
chr4 (267-367)||(1099726-1099826)
chr4 (215-302)||(32818413-32818500)
chr4 (125-208)||(43868211-43868294)
chr4 (215-361)||(16551853-16551999)
chr4 (257-326)||(26617712-26617781)
chr4 (267-363)||(32680655-32680752)
chr4 (292-365)||(24338492-24338566)
chr4 (140-208)||(33843786-33843854)
chr4 (215-362)||(50061671-50061825)
chr4 (117-208)||(2206601-2206692)
chr4 (215-325)||(9064162-9064273)
chr4 (125-208)||(22250301-22250384)
chr4 (267-362)||(41058821-41058916)
chr4 (270-321)||(42152979-42153030)
chr4 (215-365)||(2326854-2327004)
chr4 (126-208)||(17898057-17898138)
chr4 (135-208)||(1023855-1023928)
chr4 (140-201)||(20712756-20712817)
chr4 (217-318)||(33456313-33456414)
chr4 (293-362)||(39438683-39438752)
chr4 (224-301)||(43868092-43868169)
chr4 (125-193)||(38740301-38740369)
chr4 (215-337)||(9134529-9134652)
chr4 (270-361)||(21691318-21691409)
chr4 (126-201)||(36639877-36639951)
chr4 (287-362)||(45329741-45329816)
chr4 (218-321)||(46344878-46344980)
chr4 (295-365)||(55085125-55085196)
chr4 (125-208)||(55927697-55927780)
chr4 (263-313)||(2174297-2174347)
chr4 (267-361)||(20712546-20712640)
chr4 (269-363)||(32100192-32100286)
chr4 (170-208)||(35065138-35065176)
chr4 (166-207)||(8604590-8604631)
chr4 (266-326)||(12926822-12926880)
chr4 (222-311)||(35423128-35423217)
chr4 (292-365)||(50358134-50358207)
chr4 (266-326)||(25318749-25318808)
chr4 (132-204)||(32634085-32634157)
chr4 (152-208)||(41075898-41075954)
chr4 (293-365)||(43075955-43076027)
chr4 (154-210)||(54487248-54487304)
chr4 (125-204)||(7223104-7223182)
chr4 (217-358)||(8330013-8330156)
chr4 (217-318)||(11271582-11271685)
chr4 (287-365)||(17898359-17898437)
chr4 (267-314)||(22683806-22683853)
chr4 (261-312)||(37353391-37353442)
chr4 (261-312)||(37365365-37365416)
chr4 (139-186)||(48045693-48045740)
chr4 (219-365)||(54705437-54705584)
chr4 (135-208)||(4243462-4243536)
chr4 (270-312)||(29728947-29728989)
chr4 (268-365)||(47596391-47596489)
chr4 (151-208)||(25927381-25927438)
chr4 (153-198)||(29114804-29114849)
chr4 (224-317)||(29779106-29779199)
chr4 (215-280)||(30889764-30889829)
chr4 (268-365)||(47315092-47315189)
chr4 (268-359)||(471963-472055)
chr4 (152-208)||(12667163-12667219)
chr4 (131-191)||(28141045-28141105)
chr4 (128-180)||(30889880-30889932)
chr4 (289-365)||(31013850-31013926)
chr4 (230-310)||(33347228-33347308)
chr4 (125-165)||(34155811-34155851)
chr4 (124-191)||(36150625-36150693)
chr4 (140-204)||(41751214-41751278)
chr4 (215-247)||(45011884-45011916)
[»] chr5 (54 HSPs)
chr5 (217-361)||(34250396-34250540)
chr5 (270-364)||(3043102-3043196)
chr5 (217-321)||(6951350-6951453)
chr5 (268-364)||(15368136-15368232)
chr5 (125-208)||(35138950-35139033)
chr5 (263-365)||(29922786-29922888)
chr5 (261-350)||(10898629-10898718)
chr5 (270-362)||(39097159-39097251)
chr5 (215-325)||(14299262-14299372)
chr5 (267-369)||(37121473-37121575)
chr5 (125-186)||(14299423-14299484)
chr5 (215-364)||(18851125-18851274)
chr5 (125-208)||(117423-117506)
chr5 (215-365)||(22226279-22226429)
chr5 (217-322)||(42439662-42439768)
chr5 (223-314)||(10860405-10860497)
chr5 (125-213)||(14671095-14671182)
chr5 (215-274)||(9818717-9818776)
chr5 (293-364)||(10859942-10860013)
chr5 (220-319)||(11648020-11648119)
chr5 (125-208)||(27374221-27374304)
chr5 (287-362)||(28973753-28973828)
chr5 (261-363)||(10161720-10161822)
chr5 (257-359)||(13224704-13224805)
chr5 (267-317)||(43012677-43012727)
chr5 (272-325)||(7667982-7668035)
chr5 (125-198)||(29922985-29923058)
chr5 (124-180)||(2868348-2868404)
chr5 (233-365)||(5468666-5468797)
chr5 (270-318)||(25548457-25548505)
chr5 (220-316)||(31906200-31906296)
chr5 (267-326)||(1105370-1105429)
chr5 (305-364)||(38845644-38845703)
chr5 (138-208)||(7035070-7035140)
chr5 (140-198)||(34454058-34454116)
chr5 (215-365)||(36639830-36639979)
chr5 (159-204)||(4306591-4306636)
chr5 (266-335)||(11911903-11911972)
chr5 (276-313)||(15955447-15955484)
chr5 (140-197)||(22811070-22811127)
chr5 (135-208)||(37877133-37877206)
chr5 (270-326)||(370808-370864)
chr5 (268-316)||(6949623-6949671)
chr5 (152-208)||(6951259-6951315)
chr5 (136-192)||(10859769-10859825)
chr5 (140-208)||(15368548-15368615)
chr5 (273-357)||(16016879-16016963)
chr5 (287-323)||(16293997-16294033)
chr5 (140-196)||(18637370-18637426)
chr5 (230-314)||(27374349-27374433)
chr5 (152-208)||(29184357-29184413)
chr5 (267-365)||(32980437-32980534)
chr5 (140-208)||(36927629-36927697)
chr5 (294-326)||(39514830-39514862)
[»] chr2 (70 HSPs)
chr2 (290-365)||(7629754-7629829)
chr2 (257-326)||(15928519-15928588)
chr2 (217-365)||(6327114-6327257)
chr2 (215-321)||(42740913-42741019)
chr2 (217-326)||(2002740-2002849)
chr2 (131-208)||(15220794-15220871)
chr2 (140-208)||(4894099-4894167)
chr2 (152-208)||(16518853-16518909)
chr2 (238-326)||(37420263-37420351)
chr2 (125-208)||(680218-680300)
chr2 (238-353)||(1976931-1977046)
chr2 (287-362)||(9943318-9943393)
chr2 (290-365)||(42982446-42982521)
chr2 (246-356)||(16013785-16013895)
chr2 (290-356)||(40582650-40582716)
chr2 (267-365)||(3476525-3476625)
chr2 (140-208)||(1976806-1976874)
chr2 (125-212)||(11759786-11759873)
chr2 (217-320)||(12036998-12037101)
chr2 (243-358)||(680348-680469)
chr2 (140-210)||(3853926-3853996)
chr2 (218-300)||(31453340-31453422)
chr2 (267-317)||(36987207-36987257)
chr2 (267-312)||(7630361-7630406)
chr2 (220-321)||(16518715-16518816)
chr2 (222-326)||(37561638-37561742)
chr2 (303-355)||(16519348-16519400)
chr2 (126-197)||(1763259-1763330)
chr2 (131-202)||(6767756-6767827)
chr2 (125-204)||(10618877-10618956)
chr2 (270-317)||(43501083-43501130)
chr2 (217-362)||(7630055-7630200)
chr2 (125-195)||(42774784-42774853)
chr2 (130-208)||(44412151-44412228)
chr2 (267-320)||(33502944-33502997)
chr2 (215-252)||(43501130-43501167)
chr2 (267-312)||(44148518-44148563)
chr2 (131-207)||(4908866-4908942)
chr2 (124-192)||(12110918-12110986)
chr2 (293-357)||(37649595-37649659)
chr2 (292-364)||(43717235-43717307)
chr2 (217-320)||(3352013-3352116)
chr2 (139-202)||(4119368-4119431)
chr2 (125-208)||(4779183-4779265)
chr2 (140-195)||(7632536-7632591)
chr2 (267-326)||(16488277-16488336)
chr2 (219-318)||(30503148-30503247)
chr2 (140-191)||(30503299-30503350)
chr2 (152-195)||(33502322-33502365)
chr2 (267-326)||(42906966-42907025)
chr2 (303-365)||(3654724-3654786)
chr2 (152-206)||(7649298-7649352)
chr2 (223-316)||(11510894-11510988)
chr2 (138-204)||(16519523-16519589)
chr2 (288-362)||(37745995-37746069)
chr2 (152-206)||(40401597-40401651)
chr2 (295-365)||(42774958-42775028)
chr2 (171-208)||(11504035-11504072)
chr2 (140-197)||(23359942-23359999)
chr2 (153-206)||(28206754-28206807)
chr2 (171-208)||(33019129-33019166)
chr2 (171-208)||(33047555-33047592)
chr2 (267-336)||(44670989-44671058)
chr2 (131-207)||(4007136-4007211)
chr2 (263-311)||(10280683-10280731)
chr2 (270-362)||(33047650-33047742)
chr2 (123-207)||(36893413-36893497)
chr2 (126-186)||(43969802-43969862)
chr2 (163-203)||(44148654-44148694)
chr2 (288-336)||(44439171-44439219)
[»] scaffold0361 (2 HSPs)
scaffold0361 (131-208)||(14047-14124)
scaffold0361 (238-365)||(14179-14306)
[»] scaffold0314 (1 HSPs)
scaffold0314 (290-361)||(17322-17393)
[»] scaffold0024 (1 HSPs)
scaffold0024 (214-321)||(23635-23742)
[»] scaffold0172 (1 HSPs)
scaffold0172 (124-192)||(15255-15323)
[»] scaffold0393 (1 HSPs)
scaffold0393 (267-362)||(12402-12498)


Alignment Details
Target: chr3 (Bit Score: 371; Significance: 0; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 23 - 485
Target Start/End: Original strand, 1441217 - 1441694
Alignment:
Q  23 tgagtttgattctcacaaaacacttccttggagaggggtgaggtgcttttagtgtgaacaaaccctagactagagattagatagtttgttttgtggtggc 122  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  1441217 tgagtttgattctcacaaaacacgtccttggagaggggtgaggtgcttttagtgtgagcaaaccctagactagagattagatagtttgttttgcggtggc 1441316  T
Q  123 aagaat---------------taattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    ||||||               ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  1441317 aagaatttatattgagtgaattaattttgtaaaattgattctgtctaaaagtgagttgaacgtaaagtgatttgtgtttagatacattcacgtaaaagtg 1441416  T
Q  208 atttgtgtctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  1441417 atttgtgtctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagaaaccaaacatgtcaaact 1441516  T
Q  308 caattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacacgaagcatgtggggatacctggggttagcggtgtcaaaagttg 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  1441517 caattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacacgaagcatgtgggggtacctggggttagcggtgtcaaaggttg 1441616  T
Q  408 aaatggttcgatttttgggagnnnnnnnccgaaccaataaaaactagtttgtttggtttgatttttgcaatatttttt 485  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1441617 aaatggttcgatttttgggagaaaaaaaccgaaccaataaaaactagtttgtttggtttgatttttgcaatatttttt 1441694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 3845201 - 3845305
Alignment:
Q  261 tagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaaca 360  Q
    ||||| || |||||||||||||  | | ||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  3845201 tagaggcagaatcaattctacttgagatcaaacaaacatgtcaaaatcaattctacacctctagaatcaattttggttactccaaaagtggaaccaaaca 3845300  T
Q  361 tacac 365  Q
    |||||    
T  3845301 tacac 3845305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 267 - 365
Target Start/End: Complemental strand, 39256665 - 39256567
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||| |||||||||||  | || || |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| ||||    
T  39256665 caaagtcaattctacttgagagtaatcaaacatgtcaaaatcaattctacacctctagaactaattttgatttctccaaaagtggaaccaaacacacac 39256567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 51285518 - 51285451
Alignment:
Q  298 atgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||||    
T  51285518 atgtcaaaatcaattctacacctctagaattaatttcggctactcaaaaagtggaaccaaacatacac 51285451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 31708163 - 31708249
Alignment:
Q  122 caagaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||| |||||||||||||||||  | ||||||||||||||  | ||||||| ||||||||| |||||||||||||||||||||    
T  31708163 caagaattgattttgtaaaattgattaggactaaaagtgagttgctgataaagtggtttgtgtttggatacattcatgtaaaagtga 31708249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 52925726 - 52925804
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||  | |||||||||||||||| |||||||||    
T  52925726 agcaaccaaacatgtcaaaatcaattatacacctctagaatcaattttgactcctccaaaagtggaaccgaacatacac 52925804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 365
Target Start/End: Original strand, 584888 - 584985
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||| ||||||| ||| | || ||| |||||| |||||||||| ||| |||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  584888 aaaaccaattcttctctagaggaacaaaacatatcaaaatcaactctgcacctctagaatcaattttggttactccaaaagtgggaccaaacatacac 584985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 1290758 - 1290675
Alignment:
Q  280 actcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatac 363  Q
    |||||| ||||||||||||  ||||||||||||||||||||||||||  |||||| ||| ||| | ||||||||||||||||||    
T  1290758 actcaatagcaaccaaacaaatcaaaatcaattctacacctctagaatcaattttagttcctctagaagtggaaccaaacatac 1290675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 3776506 - 3776431
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||||||||||||||||||||| ||  |||||||  | ||||||||||||||||||| ||||||    
T  3776506 aaccaaacatgtcaaaatcaattctacacctctataaccaattttgtctcctccaaaagtggaaccaaatatacac 3776431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 267 - 364
Target Start/End: Original strand, 5046171 - 5046268
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||||||||| ||||||| |||| || ||||||| |||||||||||| |||||||||||||  ||  || | | |||||||||||||||||||||||||    
T  5046171 caaaatcaactctactctaaagaaatcaaacatatcaaaatcaattttacacctctagaatcaacattagctcctccaaaagtggaaccaaacataca 5046268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 31013164 - 31013093
Alignment:
Q  137 taaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||| | |||||||||||||| || ||||||||||||||||| ||| |||||||||| ||||||    
T  31013164 taaaattgattccgactaaaagtgagttgtagataaagtgatttgtgtttggatgcattcatgtacaagtga 31013093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 3776665 - 3776597
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||| |||||| ||||||||| |||||||||||| || || |||||||| ||||||||||||    
T  3776665 aattgattctggctaaaattgagttgaatgtaaagtgatttatgcttggatacattgatgtaaaagtga 3776597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 30958195 - 30958111
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaag-tgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||||||||||||||||| || ||||| |||||||||| |||||| | |||| ||||| |||| ||||||||||||||||    
T  30958195 gaattgattttgtaaaattgattttggctaaatgtgagttgaatgtaaagtttatttatgtttggatatattcatgtaaaagtga 30958111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 30974007 - 30973923
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaag-tgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||||||||||||||||| || ||||| |||||||||| |||||| | |||| ||||| |||| ||||||||||||||||    
T  30974007 gaattgattttgtaaaattgattttggctaaatgtgagttgaatgtaaagtttatttatgtttggatatattcatgtaaaagtga 30973923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 41115413 - 41115505
Alignment:
Q  223 caaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattcta 315  Q
    |||||||||||||| |||| |||||||||| || ||| || |  ||||||||||||||||  ||| || |||||||||||||||||| |||||    
T  41115413 caaaagctacaaattctagcttcaagtagaatcaattctacaagcaaaatcaattctactttaaaacatccaaacatgtcaaaatcagttcta 41115505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 40339384 - 40339301
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||| ||||||||||||| ||||| ||| |||| |||||||| ||| ||||| |||| ||| | ||||||||||    
T  40339384 gaattaattttgtataattgattctgtcaaaaagagagctgaatgtaaagtggtttatgtttggatatatttaggtaaaagtga 40339301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 54596805 - 54596738
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggt 337  Q
    |||||||||||||  ||| ||||||||||||||| |||||||| |||||||||| || ||||||||||    
T  54596805 aatcaattctacttgaaaacaaccaaacatgtcataatcaattttacacctctaaaattaattttggt 54596738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 24916636 - 24916578
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttaga 189  Q
    |||||||||||||||||| | |||||||||||||||| ||||| |||||| ||||||||    
T  24916636 attttgtaaaattgattcaggctaaaagtgagttgaatgtaaaatgatttatgtttaga 24916578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 34867309 - 34867379
Alignment:
Q  295 aacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||||||||||||| |||||  ||||| || | ||  ||||||||||||||||||||||    
T  34867309 aacatgtcaaaatcaattctacacctgtagaatcaatttcggcttctgtaaaagtggaaccaaacatacac 34867379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 215 - 364
Target Start/End: Complemental strand, 35058403 - 35058253
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||||||||  || | |||| | |||||||| || ||| | ||| ||||||||||||||||| | ||| | ||||||||| | || || ||||    
T  35058403 tctagaatcaaaagctcgaatttctagctccaagtagaatcaattcttgaggcaaaatcaattctactcgagagccatcaaacatgtgagaaacagttct 35058304  T
Q  315 acacctctagaa-ataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||| ||||||||   |||||||||  ||||| ||||| |||||||||||||    
T  35058303 acatctctagaatccaattttggtccctccagaagtgaaaccaaacataca 35058253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 7262966 - 7262889
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||| || ||||||||  || |||||||||||||||| | || ||| ||||| |||||||||||||||||||||    
T  7262966 attttgtagaaatgattctggatagaagtgagttgaaggtataatgttttatgttttgatacattcatgtaaaagtga 7262889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 360
Target Start/End: Original strand, 7717468 - 7717561
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaaca 360  Q
    |||||||||||||||||   || ||||||||||||||||||||| |||| ||||||| ||  |||||| | |  | ||||||||||||||||||    
T  7717468 caaaatcaattctactctggaggaaccaaacatgtcaaaatcaactctaaacctctacaatcaattttagctcatgcaaaagtggaaccaaaca 7717561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 359
Target Start/End: Complemental strand, 5406948 - 5406804
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||| ||||| ||||||| | | |||| ||| |||||| || ||| ||||| ||||||||||| ||||  | || |||||||||    ||||||||||||    
T  5406948 tctataatcagaagctaccatttctagcttcgagtagaatccattctagaggcaaaatcaattatactttagaggaaccaaacacagaaaaatcaattct 5406849  T
Q  315 acacctctagaaataattttggttactccaaaagtggaaccaaac 359  Q
    | ||||||||||  | |||||| | ||||||||||||||| ||||    
T  5406848 agacctctagaatcatttttggctcctccaaaagtggaactaaac 5406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 7012754 - 7012670
Alignment:
Q  114 tgtggtggcaagaattaattttg-taaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattca 197  Q
    |||||||| || ||||||||||| || |||||||| ||  ||||||||||||||| |||||||||||| ||||| ||||| ||||    
T  7012754 tgtggtggaaaaaattaattttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttca 7012670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 14022116 - 14022052
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    |||| ||||| ||||||||||||||| || |||||| |||||||||| ||||||||||| |||||    
T  14022116 aatttattctatctaaaagtgagttgcagataaagtaatttgtgtttggatacattcatttaaaa 14022052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 31766174 - 31766242
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagataca 193  Q
    ||||| ||||||||||||| ||| ||  |||||||||||||||| ||||||||||| ||||| ||||||    
T  31766174 gaattgattttgtaaaattaattttggataaaagtgagttgaagttaaagtgatttatgtttggataca 31766242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 32523272 - 32523336
Alignment:
Q  136 gtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgt 200  Q
    |||||||||||| ||  ||||||| |||||||| ||||||||||||||||| ||| |||||||||    
T  32523272 gtaaaattgattttgattaaaagttagttgaagataaagtgatttgtgtttggatgcattcatgt 32523336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 42484442 - 42484509
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||  |||||||| |||| |||||||||||||||||||||||| ||| | |||||||||||    
T  42484442 aattgattctggttaaaagtgggttgcaggtaaagtgatttgtgtttagatgcatac-tgtaaaagtga 42484509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 584720 - 584803
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||||||||||||||||| |  |||||| | |||||||| ||||  ||||| ||||| |||||||| ||||||||||||    
T  584720 gaattgattttgtaaaattgattttagctaaaattaagttgaagctaaatggatttctgtttggatacatttatgtaaaagtga 584803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 5407043 - 5406975
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatttg 212  Q
    ||||||||||  |||||| ||||||||||||||||| ||    |||| |||||||||||||||||||||||||    
T  5407043 aattgattctagctaaaattgagttgaaggtaaagttat----gtttggatacattcatgtaaaagtgatttg 5406975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 7298361 - 7298511
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagt-agagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattcta 315  Q
    |||| |||||| ||||||||||||| ||||||| ||| |||||| | ||||||| |||||| || |||   |||| || ||||||| || ||||||| ||    
T  7298361 tagactcaaaaactacaaatcctagcttcaagttagaatcgattctggagacaacatcaat-ctgctcgtgagcatccgaacatgtaaatatcaatttta 7298459  T
Q  316 cacctctagaaataattttggttactccaaaagtggaaccaaacatacacga 367  Q
    || ||||||||  |||| || || ||| ||| ||||||||||||||| ||||    
T  7298460 caactctagaatcaattatgattcctcaaaacgtggaaccaaacatagacga 7298511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 8801941 - 8801886
Alignment:
Q  266 acaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctc 321  Q
    |||||||||| ||||||||| | ||||||||||||| |||||||||| ||||||||    
T  8801941 acaaaatcaaatctactcaacaccaaccaaacatgtgaaaatcaattatacacctc 8801886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 315
Target Start/End: Original strand, 32523385 - 32523484
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttc-aagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattcta 315  Q
    ||||||||||||||||||||||||  ||| |||||||    ||||| ||| ||||||| ||| ||||| |||||||||||||| |||  |||||||||||    
T  32523385 tagaatcaaaagctacaaatcctaacttccaagtagaaataattatggaggcaaaatctattttactcgaaagcaaccaaacaagtctgaatcaattcta 32523484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 35264338 - 35264417
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    ||||| ||| ||||||||||||| |  | |||||||||||||| ||||||||| || ||||| | |||||||||||||||    
T  35264338 gaattgattctgtaaaattgattgtaaccaaaagtgagttgaaagtaaagtgagttatgtttgggtacattcatgtaaaa 35264417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 37334973 - 37335040
Alignment:
Q  137 taaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    |||||||||||| | |||||| |||||||||||||||||||||| ||| |  |||||||||| |||||    
T  37334973 taaaattgattccgactaaaattgagttgaaggtaaagtgatttatgtctgaatacattcatataaaa 37335040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 52925551 - 52925630
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaag 205  Q
    |||| |||||||||||||||||||  |||||| ||||||||| |||||||| ||| ||||| |||||  | |||||||||    
T  52925551 aattgattttgtaaaattgattctcactaaaattgagttgaaagtaaagtggtttatgtttggataccgtaatgtaaaag 52925630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 25129466 - 25129548
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    ||||| || ||||||||||||||| |  ||||||||||||||| |||| ||||||| ||||| |||  ||| |||||||||||    
T  25129466 gaattgatgttgtaaaattgattcaggataaaagtgagttgaatgtaacgtgatttatgtttggatgtatttatgtaaaagtg 25129548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 35253407 - 35253477
Alignment:
Q  138 aaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||| || |||||| |||||| ||||||||||||||| | ||| || ||| ||||||||||||||    
T  35253407 aaaattgattttggctaaaattgagtttaaggtaaagtgatttatatttggaaacaatcatgtaaaagtga 35253477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 365
Target Start/End: Original strand, 35264454 - 35264604
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||||||||  || | ||||||||||||||| ||   | | ||| || ||||||||||  || | ||||||||||||||| | |||||||| |    
T  35264454 tctagaatcaaaagctctaatttctagtttcaagtagaatcatatttggaggcagaatcaattctcttcgagagcaaccaaacatgtgagaatcaatttt 35264553  T
Q  315 acacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    || |||||||||  |||||||   |||| | || || ||||||||||||||    
T  35264554 actcctctagaataaattttgaccactctagaaatgaaaccaaacatacac 35264604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 41591307 - 41591361
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    |||||| |||||||||  ||||||||||| ||||| |||||||||||||||||||    
T  41591307 ctaaaaatgagttgaatttaaagtgatttatgtttggatacattcatgtaaaagt 41591361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 50321849 - 50321903
Alignment:
Q  263 gagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    |||||||||| ||||||||| |||| ||||||||||||||| ||| |||||||||    
T  50321849 gagacaaaattaattctactaaaaaacaaccaaacatgtcagaattaattctaca 50321903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 40736580 - 40736677
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    ||||||||||||||| ||||||  |||||||||||||| || |||   ||  ||||||||||| ||||| | | ||| |||||| |||||||||||||    
T  40736580 tctagaatcaaaagcgacaaattatagtttcaagtagaatcaatttcggatgcaaaatcaattttactcgacaacaatcaaacacgtcaaaatcaatt 40736677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 41596110 - 41596159
Alignment:
Q  159 tgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||| |||||||||||| ||||| |||||||||||| ||||||||    
T  41596110 tgagttgaatgtaaagtgatttctgtttggatacattcatggaaaagtga 41596159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 46943247 - 46943308
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttt 186  Q
    ||||| ||| |||||||||||||||| |||||| ||||||| ||||| ||| ||||||||||    
T  46943247 gaattgattctgtaaaattgattctgactaaaattgagttgtaggtatagtaatttgtgttt 46943308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 364
Target Start/End: Original strand, 48410907 - 48411004
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||||||||||||||||| ||||||| ||||||| ||| ||||||||| |||| | |||||  |||| ||    ||| ||||||| |||||||||||||    
T  48410907 caaaatcaattctactcgaaagcaatcaaacatctcagaatcaattccacacttatagaatcaattctgacccctctaaaagtgtaaccaaacataca 48411004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 7717367 - 7717462
Alignment:
Q  218 agaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||| ||||||||| | |||| |||||||||| || ||| | ||| |||||||||||||||||    | |||| ||||||||||||||||||||    
T  7717367 agaatcagaagctacaatttctagcttcaagtagaatcaattctggaggcaaaatcaattctactctggcggaacc-aacatgtcaaaatcaattct 7717462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 33548232 - 33548188
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    ||||||||||||||| || |||| |||||||||||||||||||||    
T  33548232 aaaatcaattctacttaatagcatccaaacatgtcaaaatcaatt 33548188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 38332635 - 38332691
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    |||||||| | ||||| ||| |||||||||||||||||||||| ||||| |||||||    
T  38332635 aatcaattttgctcaagagccaccaaacatgtcaaaatcaattatacacatctagaa 38332691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 43987644 - 43987692
Alignment:
Q  264 agacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||||||||||||| ||||||| | || |||||||||||||||||||||    
T  43987644 agacaaaatcaattgtactcaagaacatccaaacatgtcaaaatcaatt 43987692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 365
Target Start/End: Complemental strand, 52364017 - 52363957
Alignment:
Q  305 aatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||| |||||||||| ||  |||||||||  ||| ||||||||||||||||||||||    
T  52364017 aatcaattatacacctctataatcaattttggtccctctaaaagtggaaccaaacatacac 52363957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 358
Target Start/End: Original strand, 21007732 - 21007827
Alignment:
Q  264 agacaaaatcaa-ttctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaa 358  Q
    |||||||||||| || ||||||||  |||| ||||||||||||||||||| || | || || ||  |||||||| | ||||||||||| |||||||    
T  21007732 agacaaaatcaaattttactcaaagacaactaaacatgtcaaaatcaattatatatctttaaaatcaattttggctcctccaaaagtgaaaccaaa 21007827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 366
Target Start/End: Complemental strand, 38022407 - 38022328
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacacg 366  Q
    ||||| |||||||| ||||||||||||||||| |||||||  || ||||||   || | ||||| |||||||||||||||    
T  38022407 agcaatcaaacatgccaaaatcaattctacacttctagaatcaactttggtccttctagaagtgaaaccaaacatacacg 38022328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 46943162 - 46943111
Alignment:
Q  266 acaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    ||||||| |||| ||||| ||| |||||||||||||||||||||||| ||||    
T  46943162 acaaaattaattatactcgaaatcaaccaaacatgtcaaaatcaattgtaca 46943111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 829879 - 829786
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacat 361  Q
    ||||||||||| |||| || |||  ||||| |||||||||||| || ||||| | |||||  ||||||||||  ||||||||||||||| |||||    
T  829879 caaaatcaattatactaaagagcg-ccaaatatgtcaaaatcacttttacacatgtagaatgaattttggttcatccaaaagtggaacctaacat 829786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 365
Target Start/End: Original strand, 2410026 - 2410124
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaa-ttctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||  | | || |||||||||||||||| || || ||||||| |||||| |||||||  | | ||||||||| || |||||||||||    
T  2410026 aaaatcaattctacttgagaacatccaaacatgtcaaaataaatttttacacctttagaaacaattttgactccaccaaaagtgaaatcaaacatacac 2410124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 365
Target Start/End: Complemental strand, 7262868 - 7262790
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||||||||| |||||||||| |||||||| ||  ||||||||    || || |||| ||||||||||||||    
T  7262868 agcaaccaaacatgtcagaatcaattcttcacctctaaaatcaattttggcccatctaatagtgaaaccaaacatacac 7262790  T

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Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 23290327 - 23290269
Alignment:
Q  223 caaaagctacaaatcctagtttcaag-tagagtcgattatagagacaaaatcaattcta 280  Q
    ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||||||    
T  23290327 caaaagctacaaatcatagtttcaagttagaatcaactatagagacataatcaattcta 23290269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 44958579 - 44958621
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtga 177  Q
    ||||||||||||| || |||||||||||||||| |||||||||    
T  44958579 tgtaaaattgattttggctaaaagtgagttgaaagtaaagtga 44958621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 321
Target Start/End: Original strand, 44958721 - 44958755
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctc 321  Q
    ||||||||||||||||| |||||||||||||||||    
T  44958721 agcaaccaaacatgtcagaatcaattctacacctc 44958755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 49526683 - 49526753
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatt 210  Q
    |||||||| ||  ||||||||| ||||  ||||| |||||| ||||| ||||||||||||||||| |||||    
T  49526683 aattgattttgattaaaagtgaattgattgtaaattgatttatgtttggatacattcatgtaaaattgatt 49526753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 1290853 - 1290804
Alignment:
Q  157 agtgagttgaaggtaaagtgattt-gtgtttagatacattcatgtaaaag 205  Q
    ||||||||||||||||| |||||| ||||||  |||||||||||||||||    
T  1290853 agtgagttgaaggtaaaatgatttggtgtttgaatacattcatgtaaaag 1290804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 7742193 - 7742250
Alignment:
Q  222 tcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattct 279  Q
    |||||||||||||||  |||||||||||| | |  |||||| ||||||||||||||||    
T  7742193 tcaaaagctacaaattttagtttcaagtaaaattaattatatagacaaaatcaattct 7742250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 336
Target Start/End: Complemental strand, 12675003 - 12674934
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttgg 336  Q
    ||||||||| ||||||  ||| ||||||||||||| |  |||||||||||||||| ||||  ||||||||    
T  12675003 caaaatcaactctacttgaaaacaaccaaacatgttaggatcaattctacacctccagaatcaattttgg 12674934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 47356316 - 47356385
Alignment:
Q  243 ttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    ||||||| || |||||| || |||||||||||||| ||||  | ||||||||||||| ||| ||||||||    
T  47356316 ttcaagtggaatcgattctaaagacaaaatcaattatacttgatagcaaccaaacatatcataatcaatt 47356385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 51285701 - 51285648
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaag 205  Q
    |||||||||||||||| ||||||| |||  || || ||||||||||||||||||    
T  51285701 ctaaaagtgagttgaatgtaaagtaattcatgcttggatacattcatgtaaaag 51285648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 1114969 - 1114913
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||| | |||||||  |||||||||||||||||| ||| |||||||| |||||||    
T  1114969 ctaaaaataagttgaatataaagtgatttgtgtttatatatattcatgttaaagtga 1114913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 21023222 - 21023286
Alignment:
Q  133 tttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattca 197  Q
    ||||||||||||||| ||  |||| ||||||||||  | ||||||||| ||||||||||| ||||    
T  21023222 tttgtaaaattgattttggttaaatgtgagttgaatttgaagtgatttatgtttagatactttca 21023286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 25359547 - 25359587
Alignment:
Q  171 aaagtgatttgtgtttagatacattcatgtaaaagtgattt 211  Q
    |||||||||||||||| ||||||||||| || |||||||||    
T  25359547 aaagtgatttgtgtttggatacattcatatagaagtgattt 25359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 46853476 - 46853544
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||| || ||| |||| |||||||||||||||||||| |||   |||| ||| ||||||||||||    
T  46853476 aattgattttggctacaagtaagttgaaggtaaagtgatttatgtcaggatatatttatgtaaaagtga 46853544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 48089819 - 48089887
Alignment:
Q  294 aaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||| |||||| ||||| ||||||||||  |||||||  | ||||||||||| || ||||||||    
T  48089819 aaacatgtctaaatcagttctatacctctagaataaattttgactcctccaaaagtgaaaacaaacata 48089887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 220 - 365
Target Start/End: Complemental strand, 31863 - 31718
Alignment:
Q  220 aatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacc 319  Q
    |||||||||||||||||||||| |||||||| | || ||| | ||| || |||||||| ||||| | | ||||||||||||||| |||||||||||||||    
T  31863 aatcaaaagctacaaatcctagcttcaagtataatcaattttggaggcagaatcaattttactcgacaacaaccaaacatgtcagaatcaattctacacc 31764  T
Q  320 tctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||  ||||||||| |||| | ||||||||||||||||||||    
T  31763 tctagaatcaattttggtcactctagaagtggaaccaaacatacac 31718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 10368116 - 10368000
Alignment:
Q  132 ttttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatttgtgtctagaatcaaaagcta 231  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    ||||||||||||||||     
T  10368116 ttttgtaaaattgattttgagtaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaaatgaat----tctagaatcaaaagctg 10368021  T
Q  232 caaatcctagtttcaagtaga 252  Q
    ||||||||||  |||||||||    
T  10368020 caaatcctagcctcaagtaga 10368000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 32927934 - 32927833
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||| |||||||||||||||||||||| |||||||||| || | ||| ||| ||||||||||||||||  ||||||||||||||||||| | ||||||||    
T  32927934 tctataatcaaaagctacaaatcctagcttcaagtagaatcaactattgaggcaaaatcaattctactggaaagcaaccaaacatgtcagagtcaattct 32927835  T
Q  315 ac 316  Q
    ||    
T  32927834 ac 32927833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 32928050 - 32927967
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||| |||||||||||||||  |||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  32928050 gaattgattatgtaaaattgattcttactaaaattgagttgaaggcaaagtgatttgtgtttggatacattcatgtaaaagtga 32927967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 243 - 365
Target Start/End: Complemental strand, 35495274 - 35495152
Alignment:
Q  243 ttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactc 342  Q
    |||||||||| || ||| ||||| |||||| ||||||| |  | || ||| ||||||||||||||||||||||||| | |||||  |||||||| | |||    
T  35495274 ttcaagtagaatcaattctagaggcaaaattaattctaatttagagaaacaaaacatgtcaaaatcaattctacacttgtagaatcaattttgggtgctc 35495175  T
Q  343 caaaagtggaaccaaacatacac 365  Q
    |||||||||||||||||||||||    
T  35495174 caaaagtggaaccaaacatacac 35495152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 16972006 - 16972078
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatttg 212  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  16972006 aattgattcagactaaaagtgagttgaaggtaaaatgatttgtgtttgaatacattcatgtaaaagtgatttg 16972078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 217 - 321
Target Start/End: Complemental strand, 37684445 - 37684341
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    ||||||||||||| ||||||||||  |||||||||| || ||| | ||||||||||||||||||||| | | ||||||||||| ||  |||||||| |||    
T  37684445 tagaatcaaaagccacaaatcctaacttcaagtagaatcaattctggagacaaaatcaattctactccacaacaaccaaacatttcggaatcaattttac 37684346  T
Q  317 acctc 321  Q
    |||||    
T  37684345 acctc 37684341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 316
Target Start/End: Complemental strand, 42455925 - 42455853
Alignment:
Q  244 tcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    ||||||||| || ||||| ||| || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  42455925 tcaagtagaatcaattatggaggcagaatcaatcctactcaaaagcaaccaaacatgtcaaaatcaattctac 42455853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 362
Target Start/End: Complemental strand, 7533791 - 7533696
Alignment:
Q  263 gagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||||||||||||||  |||||||||||||||||||  ||    |||||||||| |||| |||||||||   |||||||||||||||||||||||    
T  7533791 gagacaaaatcaattctacttgaaagcaaccaaacatgtcaggat----tctacacctccagaattaattttggcccctccaaaagtggaaccaaacata 7533696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 26100073 - 26100156
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||| |||||||||||||||| ||||||  |||||||||||||||  |||||||||| ||| |||| ||||||||||||    
T  26100073 gaattgattatgtaaaattgattctgactaaaaacgagttgaaggtaaagctatttgtgtttggatgcatttatgtaaaagtga 26100156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 124 - 206
Target Start/End: Complemental strand, 35495149 - 35495067
Alignment:
Q  124 agaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    |||||| ||| |||||||||| |||||  |||||||| ||||||  ||||||||||||||||| |||| ||||||||||||||    
T  35495149 agaattgattatgtaaaattgcttctgattaaaagtgggttgaatataaagtgatttgtgtttggatatattcatgtaaaagt 35495067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 267 - 365
Target Start/End: Complemental strand, 41614834 - 41614736
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||||||||  ||| || ||||||| ||||||||||||| || ||||||||||  |||||||| | || || || |||||||||||||||||    
T  41614834 caaaatcaattctacttgaaaccatccaaacaagtcaaaatcaattttatacctctagaatcaattttggctcctacacaaatggaaccaaacatacac 41614736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 215 - 362
Target Start/End: Original strand, 44141093 - 44141247
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatg-------tcaaaat 307  Q
    ||||||||||||| ||||||||||||  |||||||||| || ||| | ||| ||||||||||||||||  | | ||| || |||||       ||| |||    
T  44141093 tctagaatcaaaaactacaaatcctaacttcaagtagaatcaattttggaggcaaaatcaattctactggacaacaatcagacatgttagaactcagaat 44141192  T
Q  308 caattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    |||||||| ||||| ||||  |||||||||| ||| | |||||||||||||||||    
T  44141193 caattctagacctccagaatcaattttggttcctctagaagtggaaccaaacata 44141247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 8252786 - 8252728
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    |||||||||||||||| |||| || |||||||||||||||||| ||||||||||||||||    
T  8252786 caaaatcaattctacttaaaa-cagccaaacatgtcaaaatcagttctacacctctagaa 8252728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 8700982 - 8700911
Alignment:
Q  137 taaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||| ||| ||||| ||||||||||||||||| |||| |||||| ||| |||| |||||||||||    
T  8700982 taaaattgattatgtttaaaattgagttgaaggtaaagtaatttatgtttaaataaattcttgtaaaagtga 8700911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 38335816 - 38335871
Alignment:
Q  153 taaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||||||| || |||||||||||  |||||||||||||||||||||    
T  38335816 taaaagtgagttgaaggtgaattgatttgtgttcggatacattcatgtaaaagtga 38335871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 4554328 - 4554226
Alignment:
Q  263 gagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||||||||| ||||  | |||||| |||  |||||||||||||| |||||||||||||  ||||| || |  ||||||| | ||||||||||||    
T  4554328 gagacaaaatcaattatactagagagcaactaaatgtgtcaaaatcaattttacacctctagaatcaatttaggctcatccaaaatttgaaccaaacata 4554229  T
Q  363 cac 365  Q
    |||    
T  4554228 cac 4554226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 5997372 - 5997434
Alignment:
Q  261 tagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctcta 323  Q
    ||||| ||||||||||| ||||||||| || |||||||||||||||||||| |||| ||||||    
T  5997372 tagaggcaaaatcaattttactcaaaaacatccaaacatgtcaaaatcaatcctacgcctcta 5997434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 215 - 321
Target Start/End: Original strand, 13384697 - 13384803
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||||||||||||||  ||| ||||| |||| || ||| | |||| | ||  ||||| |||| | | ||||||||||||||| ||||||||||    
T  13384697 tctagaatcaaaagctacaaattttagcttcaaatagaatcaattttggagaaagaacaaattcgactcgacaacaaccaaacatgtcagaatcaattct 13384796  T
Q  315 acacctc 321  Q
    |||||||    
T  13384797 acacctc 13384803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 36447681 - 36447751
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgta 201  Q
    ||||| || ||||||||| | ||||||||||||||||  |||| ||||||||||||||||||||| |||||    
T  36447681 attttatataattgattccgactaaaagtgagttgaatataaaatgatttgtgtttagatacatttatgta 36447751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 26100191 - 26100276
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagaga-caaaatcaattctactcaaaagcaaccaaacatgt 301  Q
    ||||||||||||||||||||||||| ||||| ||||  | ||| |||||| |||| |||||||||||   ||||||||||||||||    
T  26100191 tagaatcaaaagctacaaatcctagcttcaaatagaaccaattctagagaccaaagtcaattctacttggaagcaaccaaacatgt 26100276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 362
Target Start/End: Original strand, 39648242 - 39648335
Alignment:
Q  269 aaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||| ||||  | || ||||||||||||||||||||||| |||| ||||||||  |||||||  | ||| ||||||| |||||||||||    
T  39648242 aaatcaattttactatagagaaaccaaacatgtcaaaatcaattatacatctctagaatcaattttgactcctctaaaagtgtaaccaaacata 39648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 1373149 - 1373081
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagataca 193  Q
    ||||| ||||||||||||||||| ||  |||||||||||||||| | ||||||||| ||||| ||||||    
T  1373149 gaattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggataca 1373081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 362
Target Start/End: Complemental strand, 8700870 - 8700754
Alignment:
Q  243 ttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactc 342  Q
    |||||||||| || ||| |||||||||  ||||||| |||| | || |||||||||||||||| |||||||||||| | || || ||||||||| |||      
T  8700870 ttcaagtagaatcaattctagagacaa--tcaattcaactctagagaaaccaaacatgtcaaa-tcaattctacacatttaaaattaattttggctacat 8700774  T
Q  343 caaaagtggaaccaaacata 362  Q
    ||| |||| |||||||||||    
T  8700773 caatagtgaaaccaaacata 8700754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 32994177 - 32994256
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaa--gtgatttgtgtttagatacattcatgtaaaagtgatttg 212  Q
    |||||||||||||||| || |||||||||||||||||||   |||||| ||||| ||  ||||||||||||||| |||||    
T  32994177 tgtaaaattgattctggctgaaagtgagttgaaggtaaaatttgatttatgtttggactcattcatgtaaaagtcatttg 32994256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 7644596 - 7644502
Alignment:
Q  225 aaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacct 320  Q
    ||||||||||||||||| || ||||||| || ||| || |  || |||||||||||| | |||||||||||| |||||| |||||||| |||||||    
T  7644596 aaagctacaaatcctagctttaagtagaatcaattctaaatccataatcaattctacacgaaagcaaccaaa-atgtcagaatcaattgtacacct 7644502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 9461478 - 9461548
Alignment:
Q  137 taaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||| |||||| ||| ||| |  ||||||||||||||||| ||||||||||| |||||||||    
T  9461478 taaaattgattctgactaaaa-tgaattgcaactaaagtgatttgtgtttggatacattcatataaaagtga 9461548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 11791783 - 11791874
Alignment:
Q  222 tcaaaagctacaaatcctagtttcaag-tagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||||||||||||||||||| || ||| |||| ||  |||| ||| |||| |||||| || ||||| ||||||||||||| |||||||||||    
T  11791783 tcaaaagctacaaatcctagcttgaaggtagaatcagttatggaggcaaattcaattatattcaaaggcaaccaaacatgccaaaatcaatt 11791874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 363
Target Start/End: Complemental strand, 32056353 - 32056259
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatac 363  Q
    |||||||||| ||||  | ||||||||||| ||||||| ||  |||||||| |||||||  |||||||||| || |||||||| ||||||||||||    
T  32056353 aaaatcaattttactatagagcaaccaaacttgtcaaa-tctgttctacacatctagaatcaattttggttccttcaaaagtgaaaccaaacatac 32056259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 26668592 - 26668478
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    |||||| |||| ||||||||  |||||| ||||||| || ||||| ||| || |||||||||||||| | |  || ||||||||| | ||||||||||||    
T  26668592 tagaataaaaaactacaaattgtagttttaagtagaatcaattatggaggcagaatcaattctactcgacaagaatcaaacatgttagaatcaattctac 26668493  T
Q  317 acctctagaaataat 331  Q
    | ||| |||| ||||    
T  26668492 atctccagaattaat 26668478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 320
Target Start/End: Original strand, 4662946 - 4663050
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||| ||||||||||||||||||| |||||||||| |  |||   ||  ||||||||||||||  | |||||||||||| ||| || ||| ||||||    
T  4662946 tctagaaacaaaagctacaaatcctagcttcaagtagaataaattccggatgcaaaatcaattctatccgaaagcaaccaaa-atgccagaattaattct 4663044  T
Q  315 acacct 320  Q
    ||||||    
T  4663045 acacct 4663050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 7601880 - 7601933
Alignment:
Q  127 attaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgattt 180  Q
    ||||||||||||||||||||| || |||||||||| ||||| ||||| ||||||    
T  7601880 attaattttgtaaaattgattttgactaaaagtgaattgaatgtaaaatgattt 7601933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 12742276 - 12742227
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    ||||||||||||||||| |||||||||||||||  || ||||||||||||    
T  12742276 caaaatcaattctactcgaaagcaaccaaacataccataatcaattctac 12742227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 24776178 - 24776283
Alignment:
Q  257 attatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaacca 356  Q
    |||||||||  |||||||||| | | | | || |||||||||| ||||||||||||||||||| | ||||  ||||| |  |  ||||||||||||||||    
T  24776178 attatagaggaaaaatcaattttgcactagagaaaccaaacatatcaaaatcaattctacaccccgagaatcaatttcgcctcttccaaaagtggaacca 24776277  T
Q  357 aacata 362  Q
    ||||||    
T  24776278 aacata 24776283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 30251702 - 30251630
Alignment:
Q  293 caaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||| ||||||| |||| ||||| |||| ||  |||||||| | ||||||| ||||||||||||||||||    
T  30251702 caaacatatcaaaataaattttacacatctaaaatcaattttggctcctccaaatgtggaaccaaacatacac 30251630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 32809836 - 32809784
Alignment:
Q  154 aaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    |||| |||||||||||||||||||||||||||| | |  ||||||||||||||    
T  32809836 aaaaatgagttgaaggtaaagtgatttgtgtttggttctattcatgtaaaagt 32809784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 32994322 - 32994370
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacac 318  Q
    |||||||||||| | ||||||||||||||| ||| ||||||||||||||    
T  32994322 aatcaattctacacgaaagcaaccaaacatatcataatcaattctacac 32994370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 34732038 - 34732098
Alignment:
Q  303 aaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatac 363  Q
    |||||||||||||||| |||||||  |||||||||  ||| ||||||||| ||||||||||    
T  34732038 aaaatcaattctacacatctagaatcaattttggtatctctaaaagtggagccaaacatac 34732098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 36448078 - 36448006
Alignment:
Q  293 caaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||||||| |||||||||| | |||||  ||||| |  | ||| ||||||||||||||||||||||    
T  36448078 caaacatgtcaaaatgaattctacacatttagaatcaatttagacttctcaaaaagtggaaccaaacatacac 36448006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 364
Target Start/End: Complemental strand, 4554486 - 4554399
Alignment:
Q  277 tctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||||||| | || |||||||  ||||||||| |||||||||| |||||||  ||||| || | |||||||||||  ||||||||||||    
T  4554486 tctactctagaggaaccaaatctgtcaaaatgaattctacacttctagaatcaatttgggctcctccaaaagtgataccaaacataca 4554399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 4554635 - 4554584
Alignment:
Q  154 aaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaag 205  Q
    |||| ||||||||||||||  |||||||||||| ||||||||| ||||||||    
T  4554635 aaaattgagttgaaggtaagatgatttgtgttttgatacattcctgtaaaag 4554584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 18355928 - 18355975
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    |||||||||||||| ||| ||| || ||||||||||||||||||||||    
T  18355928 aatcaattctactcgaaaacaatcatacatgtcaaaatcaattctaca 18355975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 19649283 - 19649224
Alignment:
Q  138 aaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattca 197  Q
    |||||||||| ||  ||||||||||||||| |||||||||||| ||||| ||||| ||||    
T  19649283 aaaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttca 19649224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 28445024 - 28445091
Alignment:
Q  298 atgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||||||||||  ||||||||| | ||||||  | ||| |||||||||||||| |||||||    
T  28445024 atgtcaaaatcaattctatgcctctagaattcattttgcctcctcaaaaagtggaaccaagcatacac 28445091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 36200175 - 36200278
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||||| | ||||||| ||  ||||||| || || ||| | |||||| || ||||||||||    ||||| ||||||||||| ||||||||||    
T  36200175 tctagaatcaaaatcgacaaatcataacttcaagttgaatcaattctggagacataaacaattctacttgccagcaagcaaacatgtcataatcaattct 36200274  T
Q  315 acac 318  Q
    ||||    
T  36200275 acac 36200278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 365
Target Start/End: Original strand, 38875358 - 38875456
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttact-ccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||| |||| |  |  |||||||||||||||||||||||||| |||| ||  |||| || || || |||||||| |||||||||||||||    
T  38875358 caaaatcaattctattcaagaaaattcaaacatgtcaaaatcaattctacacttcta-aatcaattatgttttctcccaaaagtagaaccaaacatacac 38875456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 4336389 - 4336343
Alignment:
Q  269 aaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattcta 315  Q
    ||||||||| ||||| | | |||||||||||||||||||||||||||    
T  4336389 aaatcaattatactcgagaccaaccaaacatgtcaaaatcaattcta 4336343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 5218993 - 5219055
Alignment:
Q  298 atgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaaca 360  Q
    |||||| ||||||||||||| || ||||| ||||||||||  ||| |||||| ||||||||||    
T  5218993 atgtcagaatcaattctacatctttagaattaattttggtctctctaaaagttgaaccaaaca 5219055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 318
Target Start/End: Complemental strand, 38868538 - 38868436
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaacc-aaacatgtcaaaatcaattcta 315  Q
    ||||| ||||||||||||||| ||| |||||||||| || ||| ||||| ||  ||||||| ||||| | | ||||| ||| || ||| |||||||||||    
T  38868538 tagaaccaaaagctacaaatcttagcttcaagtagaatcaattttagaggcatcatcaattttactcgacaacaaccaaaatatatcagaatcaattcta 38868439  T
Q  316 cac 318  Q
    |||    
T  38868438 cac 38868436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 463156 - 463253
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||||||||| || ||||||||| ||||||||| |||| |  ||| || | |||||||||||||||||  | | ||||||||||| | | ||||||||    
T  463156 tctagaatcataaactacaaatcttagtttcaaatagaattaattctaaaaacaaaatcaattctactagacaacaaccaaacatattagaatcaatt 463253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 2778653 - 2778588
Alignment:
Q  143 tgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||  ||||||||||||||||| ||||||||||| | ||| |||| ||| ||| ||||||||    
T  2778653 tgattctagctaaaagtgagttgaagataaagtgatttatttttggataaatttatgcaaaagtga 2778588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 4950635 - 4950558
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||||||||||| |  ||| || |||||||||||||||||||||| ||||| |||| ||| |||  |||||||    
T  4950635 attttttaaaattgattattgctataattgagttgaaggtaaagtgatttatgtttggatatatttatgagaaagtga 4950558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 7720170 - 7720117
Alignment:
Q  264 agacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    |||||||||||||| ||||| |||| ||||||| ||| |||||||| |||||||    
T  7720170 agacaaaatcaattatactcgaaagtaaccaaatatgacaaaatcagttctaca 7720117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 7720328 - 7720257
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttta---gatacattcatgtaaaagtga 208  Q
    ||||||||||| |||||  ||||||||  |||||||||||||||||||    ||| ||||||||||||||||    
T  7720328 aattgattctgactaaatatgagttgagagtaaagtgatttgtgtttatataatatattcatgtaaaagtga 7720257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 18123374 - 18123301
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||| || |||  |||||||||| ||||||||||| |||||||||||   ||| ||| ||||||||||||    
T  18123374 tgtaaaatcgactctaactaaaagtgaattgaaggtaaaatgatttgtgttggaatatatttatgtaaaagtga 18123301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 32767352 - 32767275
Alignment:
Q  288 gcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||| |||||||||||||||||||||| | ||||||||  |||||||| |   ||||| |||  |||||||||||||    
T  32767352 gcaacgaaacatgtcaaaatcaattctatatctctagaatcaattttggctctcccaaacgtgacaccaaacatacac 32767275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 35495032 - 35494995
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtaga 252  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  35495032 tctagaatcaaaagctacaaatcctagcttcatgtaga 35494995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 36779500 - 36779435
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagata 191  Q
    |||| |||||||| |||||||| ||  ||||||||||||||| ||||||| |||| ||||| ||||    
T  36779500 aattgattttgtagaattgattttgattaaaagtgagttgaatgtaaagtaatttatgtttggata 36779435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 37684517 - 37684480
Alignment:
Q  171 aaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  37684517 aaagtgatttgtgtttggatacatttatgtaaaagtga 37684480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 4402898 - 4402949
Alignment:
Q  153 taaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaag 205  Q
    |||||||||||||| | ||||||||||| ||||| ||||||| ||||||||||    
T  4402898 taaaagtgagttga-gttaaagtgatttatgttttgatacatccatgtaaaag 4402949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 5724675 - 5724823
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    |||||| ||||| |||||||||||| |||||||||| || ||| | ||| |||||||||||||||   |||||| |||||||||||| ||||||||||||    
T  5724675 tagaataaaaagttacaaatcctagcttcaagtagaatcaattttggaggcaaaatcaattctacctgaaagcatccaaacatgtcagaatcaattctac 5724774  T
Q  317 acctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    || ||||||| |||||||||   ||| | ||||||||||||||||||||    
T  5724775 acttctagaattaattttggcccctctagaagtggaaccaaacatacac 5724823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 10400740 - 10400889
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaa-ccaaacatgtcaaaatcaattcta 315  Q
    |||||||||| |||| ||||||||  ||||| |||| |  ||| ||| | ||||| ||||||||||| ||||||| |||||||| |||||||||||| ||    
T  10400740 tagaatcaaaggctagaaatcctaacttcaactagaattaattctagtggcaaaaacaattctactcgaaagcaaaccaaacatatcaaaatcaattata 10400839  T
Q  316 cacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||  |||||||  | |||||| |||||||||||||||||||    
T  10400840 cacctctagaatcaattttgcatcctccaagagtggaaccaaacatacac 10400889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 215 - 326
Target Start/End: Original strand, 1485189 - 1485301
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaa-aatcaattc 313  Q
    |||||||||||||||| ||| | |||| |||||||||| || ||| || || |||||| |||||||||||| ||||| |||||||||||| |||||||||    
T  1485189 tctagaatcaaaagctccaatttctagattcaagtagaatcaattctaaaggcaaaattaattctactcaagagcaaacaaacatgtcaagaatcaattc 1485288  T
Q  314 tacacctctagaa 326  Q
    |||||||||||||    
T  1485289 tacacctctagaa 1485301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 765429 - 765532
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||||||||||||||| ||| |||||||||| || ||| | ||| ||||| || ||||||| ||||||||||||||| |||| ||||||||||    
T  765429 tctagaatcaaaagctacaaatcatagcttcaagtagaatcaattcttgagccaaaaccagttctacttaaaagcaaccaaacacgtcagaatcaattct 765528  T
Q  315 acac 318  Q
    ||||    
T  765529 acac 765532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 266 - 363
Target Start/End: Complemental strand, 31812300 - 31812203
Alignment:
Q  266 acaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatac 363  Q
    ||||||| |||||||||| |   ||||||||||||||||||||||||||| ||||||| ||  ||||||| |||||||||||||| ||||||||||||    
T  31812300 acaaaataaattctactcgactacaaccaaacatgtcaaaatcaattctagacctctataatgaattttgcttactccaaaagtgaaaccaaacatac 31812203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 268 - 365
Target Start/End: Original strand, 33136579 - 33136675
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||| ||||||||| |  |||||||||| ||||||| ||||||    
T  33136579 aaaatcaattatactcgagagcaaccaaacatgtcaaaatcaattatacacctctagaattaattttggct-ttccaaaagtgaaaccaaatatacac 33136675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 215 - 365
Target Start/End: Complemental strand, 4910950 - 4910800
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||||||||||||||| ||| |||||||||| || ||| | ||| || ||||||||||| |  |   ||||||||||||||| ||||||||||    
T  4910950 tctagaatcaaaagctacaaatcatagcttcaagtagaatcaatttttgaggcagaatcaattctaattgacgacaaccaaacatgtcagaatcaattct 4910851  T
Q  315 acacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||| |  ||||  |||| | ||  ||| ||||||||||||||||||||||    
T  4910850 acacattcagaatcaattatagtctctctaaaagtggaaccaaacatacac 4910800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 320
Target Start/End: Complemental strand, 26280643 - 26280542
Alignment:
Q  219 gaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacac 318  Q
    ||||||||| |||||||| |||| ||||||| || || ||| | ||| |||||||||||||||  |||| ||| ||||||||||||||||||||||||||    
T  26280643 gaatcaaaaactacaaattctagcttcaagtggaatcaattcttgaggcaaaatcaattctaccaaaaaacaatcaaacatgtcaaaatcaattctacac 26280544  T
Q  319 ct 320  Q
    ||    
T  26280543 ct 26280542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 365
Target Start/End: Original strand, 29240548 - 29240645
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||  |||  | || |||||||||||||||||| |||||||||||||  ||||||| || | ||||||||||||||||||||||||    
T  29240548 aaaatcaattctacttgaaaatatcctaacatgtcaaaatcaattttacacctctagaatcaattttgattcccccaaaagtggaaccaaacatacac 29240645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 35098501 - 35098597
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaat 311  Q
    ||||||||||||||||| |||||| ||| | ||||||| || ||  | ||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  35098501 tctagaatcaaaagctaaaaatcccagtattaagtagaatcaatcctggaagcaaaatcaattctactcaaaagtaaccaaacatgtcaaaatcaat 35098597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 6654133 - 6654232
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||| |||||||||||||||||| |||||||||| |  ||| |  ||  |||||||||||||||||| |||||||||||||| || ||||||||||    
T  6654133 tctagaattaaaagctacaaatcctagcttcaagtagaattaattctgaaggaaaaatcaattctactcaatagcaaccaaacatgacataatcaattct 6654232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 7952752 - 7952871
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||||||||||||||||| | |||||||||| |  ||| | ||| |||||| || || |||||||| ||| ||||||||||| |||||||| |    
T  7952752 tctagaatcaaaagctacaaatcctcgcttcaagtagaataaattttggaggcaaaattaaatcaactcaaaaccaatcaaacatgtcataatcaatttt 7952851  T
Q  315 acacctctagaaataatttt 334  Q
    ||||||| | || |||||||    
T  7952852 acacctccataattaatttt 7952871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 290 - 361
Target Start/End: Complemental strand, 34620853 - 34620782
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacat 361  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||| | ||||||||||||||| ||||||    
T  34620853 aaccaaacatgtcaaaatcaattctacacctttagaatcaattttgggtcctccaaaagtggaacgaaacat 34620782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 290 - 361
Target Start/End: Complemental strand, 34748290 - 34748219
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacat 361  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||| | ||||||||||||||| ||||||    
T  34748290 aaccaaacatgtcaaaatcaattctacacctttagaatcaattttgggtcctccaaaagtggaacgaaacat 34748219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 2008403 - 2008487
Alignment:
Q  237 cctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctc 321  Q
    ||||| |||||||||| | |||||| |||||||||| |||||||||| ||| ||| ||||||||||| || ||||||||||||||    
T  2008403 cctagcttcaagtagaattgattatggagacaaaatgaattctactcgaaaacaatcaaacatgtcagaaacaattctacacctc 2008487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 33997165 - 33997098
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaa 357  Q
    ||||||||||||||||||| |||||| | ||||||||  |||||||||| ||||||||||||||||||    
T  33997165 aaccaaacatgtcaaaatcgattctaaatctctagaatcaattttggttcctccaaaagtggaaccaa 33997098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 217 - 358
Target Start/End: Original strand, 25195411 - 25195550
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    |||||| |||| ||||||||||  | |||||||||| || |||   ||| || |||||||| ||||| | ||||||||||||||||| |||||||| |||    
T  25195411 tagaatgaaaaactacaaatcc--gcttcaagtagaatcaattccggaggcagaatcaattatactcgatagcaaccaaacatgtcagaatcaattatac 25195508  T
Q  317 acctctagaaataattttggttactccaaaagtggaaccaaa 358  Q
    || || ||||  |||||||||| ||| | |||||||||||||    
T  25195509 acatccagaatcaattttggttcctctagaagtggaaccaaa 25195550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 25195126 - 25195189
Alignment:
Q  147 tctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgattt 211  Q
    |||||||||||||||||||||||||||||| ||| || || |||||||||||||||| |||||||    
T  25195126 tctgtctaaaagtgagttgaaggtaaagtgttttatg-ttggatacattcatgtaaatgtgattt 25195189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 34621025 - 34620961
Alignment:
Q  144 gattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||| ||| || |||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  34621025 gattctggctagaattgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtga 34620961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 34748462 - 34748398
Alignment:
Q  144 gattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||| ||| || |||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  34748462 gattctggctagaattgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtga 34748398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 46215 - 46298
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||| |||||||||||||||  |||||||||||||| |  |||||| |||||||||| ||||||||| || ||||||||    
T  46215 gaattgattctgtaaaattgattctaactaaaagtgagttgcaattaaagttatttgtgtttggatacattcgtggaaaagtga 46298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 1500058 - 1499975
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||||||||||||||||| || ||||||| |||||||  ||||| |||||| |||||  ||||||| ||||||||||||    
T  1500058 gaattgattttgtaaaattgattttggctaaaagcgagttgagtgtaaattgatttatgtttgaatacatttatgtaaaagtga 1499975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 26550515 - 26550453
Alignment:
Q  261 tagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctcta 323  Q
    |||||||||||||||||||| |  |   |||||||||||||||||||||||||||||||||||    
T  26550515 tagagacaaaatcaattctagttgagtacaaccaaacatgtcaaaatcaattctacacctcta 26550453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 31305775 - 31305857
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||| |||||||||||||||||| | ||||||| | |||||||||||| | |||| ||||| |||| ||| ||||||||||||    
T  31305775 aattgattttgtaaaattgattccgactaaaagggtgttgaaggtaaaatcatttatgtttggatatattaatgtaaaagtga 31305857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 765322 - 765383
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattc 196  Q
    |||||||||||||||  |||||||| ||||||| ||||||||||||||||||  ||||||||    
T  765322 tgtaaaattgattctaactaaaagtaagttgaaagtaaagtgatttgtgtttccatacattc 765383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 3289892 - 3289820
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||  | || ||||||||||| || ||||||||||||||||| |||||||| ||||||||||||    
T  3289892 tgtaaaattgatttcgacttaaagtgagttgcagataaagtgatttgtgtttggatacatt-atgtaaaagtga 3289820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 434191 - 434247
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||| ||||||| |||||||||||| |||| |||| |||||||||||    
T  434191 ctaaaagtgagttgcaggtaaaatgatttgtgtttggatatattcgtgtaaaagtga 434247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 882829 - 882761
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||   ||||| ||||||||||||||| |||||| ||||| |||||||||||| ||||||||    
T  882829 aattgattctagttaaaattgagttgaaggtaaaatgatttatgtttggatacattcatgcaaaagtga 882761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 2002566 - 2002614
Alignment:
Q  273 caattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctc 321  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  2002566 caattctactcgaaaacaaccaaacatgtcaaaatcaattctacgcctc 2002614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 3799043 - 3798979
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    |||||||||||  |||||||||||||||| |||| |||||| |||||  ||||||||||||||||    
T  3799043 aattgattctgattaaaagtgagttgaagataaaatgatttatgtttttatacattcatgtaaaa 3798979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 7280527 - 7280427
Alignment:
Q  220 aatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacc 319  Q
    ||||||||||||||| |  |||||| ||||| | || ||| ||| |||| |||||||||||||  ||||||||||||||||| | ||| |||| ||||||    
T  7280527 aatcaaaagctacaagttttagttttaagtaaaatcaattttagggacacaatcaattctacttgaaagcaaccaaacatgtgagaattaattttacacc 7280428  T
Q  320 t 320  Q
    |    
T  7280427 t 7280427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 24974171 - 24974107
Alignment:
Q  301 tcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||||||||||| ||| || ||| ||||| | |||||||||||||| |||||||||||    
T  24974171 tcaaaatcaattctacacccctacaattaactttggctcctccaaaagtggaatcaaacatacac 24974107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 8856437 - 8856382
Alignment:
Q  153 taaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||  |||||||||||| |||||||||||| ||||||||||||| |||||||    
T  8856437 taaaagttggttgaaggtaaaatgatttgtgtttggatacattcatgtgaaagtga 8856382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 31305965 - 31306004
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  31305965 agcaaccaaacatgtcaaaatcaattctacacatctagaa 31306004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 6653809 - 6653747
Alignment:
Q  257 attatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacc 319  Q
    ||||||||| || |||||||||||||  | |||||||||||| ||||||||||||| ||||||    
T  6653809 attatagaggcagaatcaattctacttgacagcaaccaaacaagtcaaaatcaattatacacc 6653747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 362
Target Start/End: Complemental strand, 7263060 - 7262966
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    |||||||||| ||||| | | || || || ||||||||||||||||||||| |||||||  |||||||  |  || |||||||||||||||||||    
T  7263060 aaaatcaattatactcgagaacatcctaaaatgtcaaaatcaattctacacttctagaatcaattttgcctcatctaaaagtggaaccaaacata 7262966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 7952643 - 7952725
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||| |||||||||||||||| | | ||||||||||||||||  ||||||||| | | ||| |||| ||||||| ||||||||    
T  7952643 aattgattttgtaaaattgatcccgactaaaagtgagttgaatataaagtgatgtatatttggatatattcatgcaaaagtga 7952725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 16540144 - 16540082
Alignment:
Q  220 aatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctact 282  Q
    |||||||||||||||||||||| |||||||||| || ||| | |||||| |||||||| ||||    
T  16540144 aatcaaaagctacaaatcctagcttcaagtagaatcaattttggagacagaatcaattttact 16540082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 34063299 - 34063233
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaacca 356  Q
    ||||||||||||||||||||||||||||||| |||||  ||  |||| | ||||||||| |||||||    
T  34063299 aaccaaacatgtcaaaatcaattctacacctgtagaatcaacgttggctcctccaaaagcggaacca 34063233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 7953141 - 7953080
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttt 186  Q
    ||||| ||| || ||||||||||||| | |||| |||||||||||||||||||||| |||||    
T  7953141 gaattgattatgaaaaattgattctggccaaaattgagttgaaggtaaagtgatttatgttt 7953080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 359
Target Start/End: Original strand, 33141749 - 33141893
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagt-agagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattc 313  Q
    |||| ||||||||||| ||||| |||| ||| ||| ||| || ||| | |||  |||||||||| ||||  | ||||||||||||| ||||||||||||     
T  33141749 tctacaatcaaaagcttcaaattctaggttctagttagaatcaattctggaggtaaaatcaattatacttgagagcaaccaaacatatcaaaatcaattt 33141848  T
Q  314 tacacctctagaaataattttggttactccaaaagtggaaccaaac 359  Q
    |||||  ||||||  |||||||| | ||| ||||||| ||||||||    
T  33141849 tacactgctagaatcaattttggct-ctctaaaagtgaaaccaaac 33141893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 34073460 - 34073533
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatg 199  Q
    |||||||| |||||||||||||| |  ||||| ||||||||| ||||||| |||| ||||| |||||| |||||    
T  34073460 aattaattatgtaaaattgattccgcttaaaaatgagttgaatgtaaagttatttatgtttcgatacactcatg 34073533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 29937595 - 29937651
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttg 181  Q
    |||| |||| |||||||||||||||| |||||||||||||| || |||||| |||||    
T  29937595 gaataaattatgtaaaattgattctgactaaaagtgagttgcagataaagtaatttg 29937651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 35098398 - 35098454
Alignment:
Q  138 aaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacat 194  Q
    |||||||||| || |||||||||||||||||||||||| |||  ||||| |||||||    
T  35098398 aaaattgattttgactaaaagtgagttgaaggtaaagtaattcatgtttggatacat 35098454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 360
Target Start/End: Original strand, 579124 - 579223
Alignment:
Q  261 tagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaaca 360  Q
    ||||| |||| ||| |||||||| | ||||| ||| ||||||||||||| || |||| ||||||||  |||| | | | ||||||||||||||| |||||    
T  579124 tagaggcaaagtcagttctactcgagagcaatcaatcatgtcaaaatcagttttacatctctagaatcaattctagctgctccaaaagtggaacgaaaca 579223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 306
Target Start/End: Original strand, 2234309 - 2234348
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaa 306  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  2234309 caaaatcaattctactcaagagcaaccaaacatatcaaaa 2234348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 365
Target Start/End: Original strand, 6896030 - 6896125
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||| ||||| | | ||||||||||||||| ||||||||||||| ||| ||||  | |||| || |||  | ||||||||||||||| ||||    
T  6896030 aatcaattgtactcgacaacaaccaaacatgtcataatcaattctacatctccagaatcattttttgtcactttagaagtggaaccaaacaaacac 6896125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 7952519 - 7952444
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||| ||||||| ||||| |||||||||   ||| |||||| ||||||||| |||| |||||| ||||    
T  7952519 aaccaaacatgtgaaaatcagttctaaacctctagagtcaatgttggttcctccaaaagaggaaacaaacacacac 7952444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 18690659 - 18690620
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatca 309  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  18690659 aatcaattctacttgaaagcaaccaaacatgtcaaaatca 18690620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 26692424 - 26692503
Alignment:
Q  124 agaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaa 203  Q
    |||||| |||||||||||| |||| || | ||||||||||||||  |||| || ||| ||| ||||||||||||| ||||    
T  26692424 agaattgattttgtaaaatagattttggcaaaaagtgagttgaatataaactggtttatgtgtagatacattcatataaa 26692503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 28466926 - 28466981
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacatt 195  Q
    ||||||||||| |||||| ||||||||||||| |||| ||| ||||| ||||||||    
T  28466926 aattgattctggctaaaattgagttgaaggtatagtggtttatgtttggatacatt 28466981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 34736807 - 34736752
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacatt 195  Q
    ||||||||||| |||||| ||||||||||||| |||| ||| ||||| ||||||||    
T  34736807 aattgattctggctaaaattgagttgaaggtatagtggtttatgtttggatacatt 34736752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 34911085 - 34911022
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    ||||||||| | ||||||||||||||||||| ||||||||| ||||| |||  ||||||||||||||    
T  34911085 aattgattccgactaaaagtgagttgaaggt-aagtgatttatgtttggat--attcatgtaaaagt 34911022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 8860621 - 8860579
Alignment:
Q  166 aaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||| | ||||||||||||||||||||||| ||||||||    
T  8860621 aaggtaaaataatttgtgtttagatacattcatgcaaaagtga 8860579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 25208756 - 25208702
Alignment:
Q  153 taaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    ||||||||||||||| ||||| |||||| ||||| |||| ||| |||||||||||    
T  25208756 taaaagtgagttgaatgtaaaatgatttatgtttcgatagatttatgtaaaagtg 25208702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 323
Target Start/End: Complemental strand, 578965 - 578864
Alignment:
Q  222 tcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctc 321  Q
    |||||| ||| |||| |||| |||||||||  || ||| || |  |||||| | ||||||| |||| |||| ||||||||||||||||||| ||| ||||    
T  578965 tcaaaaactaaaaattctagcttcaagtagtatcaattctacaagcaaaattatttctacttaaaaacaactaaacatgtcaaaatcaattttactcctc 578866  T
Q  322 ta 323  Q
    ||    
T  578865 ta 578864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 3525083 - 3525002
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    ||||| ||| ||||||||||||| || |||||||||||||||| | ||| || ||| | |||  ||||||| ||||||||||    
T  3525083 gaattgattatgtaaaattgattgtggctaaaagtgagttgaatgcaaactggtttatatttgaatacatttatgtaaaagt 3525002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 19260820 - 19260877
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatac 192  Q
    |||||||||||||||| |||||| |||||||||  ||||| ||||| |||||| ||||    
T  19260820 tgtaaaattgattctggctaaaattgagttgaatataaagggatttatgtttaaatac 19260877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 19601799 - 19601714
Alignment:
Q  276 ttctactcaaaagcaaccaaacatgtcaaaat-caattctacacctctagaaataattttggttactccaaaagtggaaccaaaca 360  Q
    |||||||| | || |||||||||| ||||||  |||||||||| |||| |||  |||||||  | |||||||||||||||||||||    
T  19601799 ttctactctagaggaaccaaacatctcaaaaaacaattctacatctctggaatcaattttgactcctccaaaagtggaaccaaaca 19601714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 25195339 - 25195376
Alignment:
Q  171 aaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  25195339 aaagtgatttgtgtttggatacatttatgtaaaagtga 25195376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 30926881 - 30926942
Alignment:
Q  274 aattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttg 335  Q
    |||||||||| | ||| |||||||||||||||| ||||| ||||| |||||||  |||||||    
T  30926881 aattctactcgagagcgaccaaacatgtcaaaagcaattatacacttctagaatcaattttg 30926942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 957701 - 957745
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||    
T  957701 aaaatcaattctactcgaaagcaatcaaacatgtcgtaatcaatt 957745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 1499853 - 1499805
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacac 318  Q
    |||||||||||||| | ||||| |||||||| || ||||||||||||||    
T  1499853 aatcaattctactctacagcaatcaaacatgccataatcaattctacac 1499805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 2234672 - 2234616
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttg 181  Q
    ||||| ||| || ||||||||| ||| ||||||||||| |||||||||| |||||||    
T  2234672 gaattgattatgcaaaattgatgctggctaaaagtgagatgaaggtaaaatgatttg 2234616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 8855048 - 8854997
Alignment:
Q  154 aaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    |||||| ||||||||||||| | |||||||||| |||||||| ||||||||||    
T  8855048 aaaagttagttgaaggtaaaataatttgtgttt-gatacattaatgtaaaagt 8854997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 34026427 - 34026467
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgattt 180  Q
    ||||||||||| ||||||||||||||||| |||||| ||||    
T  34026427 aattgattctggctaaaagtgagttgaagataaagttattt 34026467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 34027351 - 34027427
Alignment:
Q  132 ttttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||||| || |||||||||||||||| || |   | ||| || ||||||| |||||||||| |||||    
T  34027351 ttttgtaaaattgattgtggctaaaagtgagttgaaagtgagacggtttatggttagatatattcatgtaagagtga 34027427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 217 - 364
Target Start/End: Complemental strand, 6021844 - 6021695
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatca---attc 313  Q
    ||||||||||||||||| ||||||| |||||||||| |||||| ||||| ||||||||||||||||  ||| ||| ||||| |||||||||||   ||||    
T  6021844 tagaatcaaaagctacatatcctagcttcaagtagaatcgattctagaggcaaaatcaattctacttgaaatcaatcaaacttgtcaaaatcaattattc 6021745  T
Q  314 tacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||||||||||| ||| | |||   | |||||||||||||||||||||||||    
T  6021744 tacacctctag-aatcaatttaactcctccaaaagtggaaccaaacataca 6021695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 217 - 318
Target Start/End: Original strand, 28083933 - 28084034
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    |||||||||||||||||||| |||| |||||||||| || ||||   |||||||||||||||||||| ||| |||||||| |||||| ||||||||||||    
T  28083933 tagaatcaaaagctacaaattctagcttcaagtagaatcaattacgaagacaaaatcaattctactcgaaaacaaccaaatatgtcagaatcaattctac 28084032  T
Q  317 ac 318  Q
    ||    
T  28084033 ac 28084034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 5268368 - 5268294
Alignment:
Q  134 ttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| |||||  ||| ||||||||||||||||    
T  5268368 ttgtaaaattgattctgcctaaaagtgagttgaatgtaaagtgatttttgtttgaatatattcatgtaaaagtga 5268294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 15478116 - 15478194
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||||||||||||||||||||||||| ||| ||  || ||||| | ||||||||||||||||||||||||||    
T  15478116 agcaaccaaacatgtcaaaatcaattctacaccgctaaaatcaagtttggctcctccaaaagtggaaccaaacatacac 15478194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 249 - 365
Target Start/End: Original strand, 49079291 - 49079407
Alignment:
Q  249 tagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaag 348  Q
    |||| |||||| | ||||| ||||||||||||||| | |  ||||||||||||||||||||| ||||||||||| |||   ||||||   ||||||||||    
T  49079291 tagaatcgatttttgagacgaaatcaattctactctagaagaaccaaacatgtcaaaatcaactctacacctctggaatcgattttgagcactccaaaag 49079390  T
Q  349 tggaaccaaacatacac 365  Q
    ||||| |||||||||||    
T  49079391 tggaatcaaacatacac 49079407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 24587899 - 24587840
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  24587899 caaagtcaattctactcaagagcaaccaaacatgtcacaatcaattctacacctctagaa 24587840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 267 - 362
Target Start/End: Complemental strand, 31117465 - 31117370
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||||||||   |||||||| |||| ||||  ||||||||||||||    
T  31117465 caaaaccaattctactcaaaaccaaccaaacctatcaaaatcaattttacacctctagagtcaattttgggtacttcaaacatggaaccaaacata 31117370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 7524259 - 7524188
Alignment:
Q  137 taaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||  ||||||||||| | ||||||||||||||||||||| || ||||| ||||||||||||    
T  7524259 taaaattgattctaactaaaagtgagctcaaggtaaagtgatttgtgtttggacacatttatgtaaaagtga 7524188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 217 - 362
Target Start/End: Complemental strand, 12655285 - 12655139
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagt-agagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattcta 315  Q
    |||| ||||| ||||||||| |||| ||||||| ||| |  ||| ||||| |||| || | ||||||| |||||||| ||||||||||||||||| | ||    
T  12655285 tagactcaaatgctacaaattctagcttcaagttagaattaattctagaggcaaagtcgaatctactccaaagcaactaaacatgtcaaaatcaacttta 12655186  T
Q  316 cacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    |||||| | ||  |||| |||||||| |||| ||||||||| |||||    
T  12655185 cacctccacaatcaattatggttactgcaaatgtggaaccagacata 12655139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 268 - 362
Target Start/End: Original strand, 32088669 - 32088763
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    |||||||||||||||  | |||||||||||||||||||||||||| ||||| || |||| ||| ||||  | ||||||| |||||| ||||||||    
T  32088669 aaaatcaattctacttgagagcaaccaaacatgtcaaaatcaattttacacgtccagaattaactttgactgctccaaacgtggaatcaaacata 32088763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 35961525 - 35961443
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||| ||| |||||||| ||||  | |||||||||||||||||||||| |||||| |||||  ||||||||||||||||||||    
T  35961525 aattgattctgtaaaatagattacggctaaaagtgagttgaaggtaaaatgatttatgtttctatacattcatgtaaaagtga 35961443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 41516977 - 41516883
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacat 361  Q
    ||||||||||||||||| ||| ||  | || |||||| ||||||||||||||||||||||   ||||||  | ||||||||||||||||||||||    
T  41516977 caaaatcaattctactcgaaaacattccaagatgtcataatcaattctacacctctagaatggattttgactcctccaaaagtggaaccaaacat 41516883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 321
Target Start/End: Original strand, 47321950 - 47322055
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||| |||| || ||||| |||| |||||||| | || ||||||||  || |||||||||||||| | | |||| |||||||||||||||||||||    
T  47321950 tctagaattaaaa-ctgcaaattctagcttcaagtataatcaattatagaagcagaatcaattctactcgacaacaacaaaacatgtcaaaatcaattct 47322048  T
Q  315 acacctc 321  Q
    |||||||    
T  47322049 acacctc 47322055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 15515002 - 15515078
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    ||||||| ||||||| |||  ||||||||||||||||||||||| ||||| || || |||| |||||||||||||||    
T  15515002 attttgtgaaattgagtctagctaaaagtgagttgaaggtaaagcgatttatgattggataaattcatgtaaaagtg 15515078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 37131937 - 37131865
Alignment:
Q  254 tcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    ||||||| | || ||||||||| ||||||| | |||||||||||||| |||||||||||||| ||||||||||    
T  37131937 tcgattacataggcaaaatcaaatctactcgagagcaaccaaacatgccaaaatcaattctatacctctagaa 37131865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 47892431 - 47892534
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||||||||||| ||| | |||| || ||||||| ||  || |||    ||||||||||||||||||||||||||||||||| |  ||||||||||    
T  47892431 tctagaatcaaaagcttcaatttctagctttaagtagaatcagttctaggtgaaaaatcaattctactcaaaagcaaccaaacatgacggaatcaattct 47892530  T
Q  315 acac 318  Q
    ||||    
T  47892531 acac 47892534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 49824879 - 49824824
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctct 322  Q
    ||||||||||| ||||| ||||||| |||| |||||||||||||||||||||||||    
T  49824879 caaaatcaattgtactcgaaagcaaacaaagatgtcaaaatcaattctacacctct 49824824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 3016204 - 3016119
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgt 301  Q
    |||||||||||||||||||||| |||  |||||||||| || |||||| || |||||||||||||| | |||| |||||||| ||||    
T  3016204 tctagaatcaaaagctacaaattctaagttcaagtagaatcaattataaag-caaaatcaattctattaaaaaacaaccaaatatgt 3016119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 125 - 195
Target Start/End: Complemental strand, 3515965 - 3515895
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacatt 195  Q
    ||||| ||| ||||||||||||||||   |||| |||||||||||| ||||||||||||||| ||||||||    
T  3515965 gaattgattatgtaaaattgattctggtgaaaattgagttgaaggtgaagtgatttgtgtttggatacatt 3515895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 20721046 - 20721108
Alignment:
Q  303 aaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||| ||||||||||||||||||  ||||||| || ||||||||||||||| ||||||||||    
T  20721046 aaaatgaattctacacctctagaatcaattttgattcctccaaaagtggaacaaaacatacac 20721108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 4347101 - 4347028
Alignment:
Q  124 agaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattca 197  Q
    |||||| |||||||| |||||||| ||  ||||||||||||||| |||||||||||| ||||| ||||| ||||    
T  4347101 agaattgattttgtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttca 4347028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 11817244 - 11817325
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    ||||| |||||||||||||||||||  ||||||| ||||||||| |||| |||||| | |||  ||||||| ||||||||||    
T  11817244 gaattgattttgtaaaattgattctaactaaaagcgagttgaagataaaatgatttttatttgaatacattaatgtaaaagt 11817325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 27849267 - 27849218
Alignment:
Q  156 aagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaag 205  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  27849267 aagtgagttgaaggtaaaatgatttgtgttaggatacattcatgtaaaag 27849218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 28267837 - 28267917
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    ||||||||||||||||||||||| || || ||||||||||| || ||||||  || ||| ||| ||||||||||||||||||    
T  28267837 gaattaattttgtaaaattgattatgact-aaagtgagttggagataaagtagttcgtgattaaatacattcatgtaaaagt 28267917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 34915197 - 34915141
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||| ||||||| |||||| |||||  ||||||||||||||||||||    
T  34915197 ctaaaagtgagttgcaggtaaaatgatttatgtttgaatacattcatgtaaaagtga 34915141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 267 - 310
Target Start/End: Complemental strand, 646170 - 646127
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaa 310  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||    
T  646170 caaaatcaattctactcaaaaacaaccaaacatgtcataatcaa 646127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 267 - 326
Target Start/End: Original strand, 9939823 - 9939882
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    ||||||||||| ||||| | || |||||||||||||||||| |||| |||||||||||||    
T  9939823 caaaatcaattatactctagaggaaccaaacatgtcaaaattaattttacacctctagaa 9939882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 11049290 - 11049248
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgatt 259  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  11049290 tagaatcaaaagctacaaatcctagcttcaagtagaatcgatt 11049248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 362
Target Start/End: Original strand, 18325187 - 18325281
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    |||||||||||||||| | |  | ||||||||||||||||||||||| ||| ||| |||  | |||||  | |||||||||||||| ||||||||    
T  18325187 aaaatcaattctactcgagaaaatccaaacatgtcaaaatcaattcttcacatctggaatcacttttgtctcctccaaaagtggaaacaaacata 18325281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 326
Target Start/End: Original strand, 31362248 - 31362355
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||||||||||||||||| |||  ||||    || || ||||| ||| |||||||||||||||   ||||||||||||||||| | | || |||||    
T  31362248 tctagaatcaaaagctacaaattctaacttca----gaatcaattatggaggcaaaatcaattctacatgaaagcaaccaaacatgttagagtcgattct 31362343  T
Q  315 acacctctagaa 326  Q
    |||| |||||||    
T  31362344 acacatctagaa 31362355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 37522976 - 37523050
Alignment:
Q  238 ctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||| |||||||||| || |||  ||||| |||||||||||||||| | ||||| ||||||||||| ||||||||    
T  37522976 ctagcttcaagtagaatcaattcgagagaaaaaatcaattctactccagagcaatcaaacatgtcataatcaatt 37523050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 3819663 - 3819566
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||  ||||| | ||||||||  |||||||||| |  ||||||||||  ||||||| || ||| | |||||||||||||| |||||    
T  3819663 aaaatcaattctactagaaagcgatcaaacatgcaaaaatcaattttggacctctagaatcaattttgtttgctctacaagtggaaccaaacttacac 3819566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 290 - 359
Target Start/End: Complemental strand, 8381951 - 8381882
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaac 359  Q
    ||||||||||||||||||||||| || ||||||||||  |||||||  | ||||| |||| |||||||||    
T  8381951 aaccaaacatgtcaaaatcaattttatacctctagaatcaattttgactcctccagaagtcgaaccaaac 8381882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 13344899 - 13344838
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttt 186  Q
    ||||| |||||||| |||||||| ||  ||||||||||||||| |||||||||||| |||||    
T  13344899 gaattgattttgtagaattgattttggttaaaagtgagttgaacgtaaagtgatttatgttt 13344838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 139 - 208
Target Start/End: Complemental strand, 35682060 - 35681992
Alignment:
Q  139 aaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||| | |||||| ||||||||||||||| |||||||| |||| |||| || ||||||||||||    
T  35682060 aaattgattcagactaaaaatgagttgaaggtaaaatgatttgtatttaaatac-ttaatgtaaaagtga 35681992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 45660533 - 45660613
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    ||||| ||| ||||||||||||| || ||||||||||||| || ||| |||||||| ||||| |||| | ||||||||||||    
T  45660533 gaattgattctgtaaaattgattttgactaaaagtgagtt-aaagtagagtgatttatgtttggataaactcatgtaaaagt 45660613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 48548975 - 48549024
Alignment:
Q  159 tgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||||||| |||||| ||||| |||||||| ||||||||||||    
T  48548975 tgagttgaaggtaaaatgatttatgttttgatacatttatgtaaaagtga 48549024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 49216780 - 49216817
Alignment:
Q  171 aaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  49216780 aaagtgatttgtgtttagatacattcaagtaaaagtga 49216817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 51500877 - 51500914
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtaga 252  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  51500877 tctagaatcaaaagctacaaatcctaggttcaagtaga 51500914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 8130911 - 8130851
Alignment:
Q  304 aaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||||||||||||||| | |||||  |||||||| | ||||| |||||||||||||||||||    
T  8130911 aaatcaattctacacttttagaatcaattttggctcctccagaagtggaaccaaacataca 8130851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 18325323 - 18325399
Alignment:
Q  132 ttttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||||| |   ||||||||||||||| ||||| || ||| |||||||||| ||| |||| |||||||    
T  18325323 ttttgtaaaattgattttacataaaagtgagttgaatgtaaaatggtttctgtttagataaatttatgtgaaagtga 18325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 45660862 - 45660941
Alignment:
Q  285 aaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||||||||||| |||||||||| |||||| | ||  ||||||||   ||||| ||||||||| ||||||||||    
T  45660862 aaagcaaccaaacatgtcagaatcaattcttcacctcca-aatcaattttggcccctccagaagtggaacgaaacatacac 45660941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 6041662 - 6041623
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  6041662 agcaaccaaacatatcaaaatcaattttacacctctagaa 6041623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 32370003 - 32370038
Alignment:
Q  170 taaagtgatttgtgtttagatacattcatgtaaaag 205  Q
    ||||||||||||||||| ||||||||||||||||||    
T  32370003 taaagtgatttgtgtttggatacattcatgtaaaag 32370038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 33693132 - 33693085
Alignment:
Q  153 taaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgt 200  Q
    |||||| |||||||| |||||||||||| ||||| |||||||||||||    
T  33693132 taaaagcgagttgaacgtaaagtgatttatgtttggatacattcatgt 33693085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 34387738 - 34387841
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    |||||||||||||| ||| ||| |  |||||||| | || |||||  |||||| |||| |||||||||| | |||| ||| |||||| |||||||| |||    
T  34387738 tagaatcaaaagctgcaattcccaacttcaagtaaaatcaattatgaagacaagatcatttctactcaacaacaacaaaaaatgtcagaatcaattatac 34387837  T
Q  317 acct 320  Q
    ||||    
T  34387838 acct 34387841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 321
Target Start/End: Original strand, 36780159 - 36780266
Alignment:
Q  215 tctagaatcaaaagctacaaa-tcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattc 313  Q
    |||| |||||||||||||||| |||||  |||||||||| |  ||| |  ||| ||||| ||| | |||| | | ||||||||||| |||||||||||||    
T  36780159 tctataatcaaaagctacaaaatcctaacttcaagtagaattcattttgaagataaaattaatacaactcgacaacaaccaaacatatcaaaatcaattc 36780258  T
Q  314 tacacctc 321  Q
    ||||||||    
T  36780259 tacacctc 36780266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 47053555 - 47053508
Alignment:
Q  139 aaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttt 186  Q
    |||||||||||| |||| ||||||||| ||||||||||||| ||||||    
T  47053555 aaattgattctgactaatagtgagttggaggtaaagtgattggtgttt 47053508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 6744606 - 6744536
Alignment:
Q  292 ccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||| ||||||||||||||| ||| |||| | ||  || |||| || |||||||||||||||||||||||    
T  6744606 ccaaatatgtcaaaatcaattttacccctcaataatcaaatttgtttcctccaaaagtggaaccaaacata 6744536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 15477944 - 15478018
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgat 209  Q
    |||||||||| ||||| | ||||||||||||||| | | ||||||| | ||| ||||||||| ||| ||||||||    
T  15477944 tgtaaaattggttctggccaaaagtgagttgaagattaggtgatttatctttggatacattcgtgtgaaagtgat 15478018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 290 - 320
Target Start/End: Complemental strand, 20720783 - 20720753
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacct 320  Q
    |||||||||||||||||||||||||||||||    
T  20720783 aaccaaacatgtcaaaatcaattctacacct 20720753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 34875028 - 34875098
Alignment:
Q  137 taaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    |||||||||||||  |||||||| ||||||  |||||||||||| | ||| |||| ||||||| |||||||    
T  34875028 taaaattgattctagctaaaagtcagttgattgtaaagtgatttatctttggataaattcatgcaaaagtg 34875098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 47725175 - 47725233
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcat 198  Q
    ||||||||||| ||||||||||||||  |||  | |||||||||||||||| |||||||    
T  47725175 aattgattctgactaaaagtgagttgcgggtggattgatttgtgtttagattcattcat 47725233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 47732167 - 47732225
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcat 198  Q
    ||||||||||| ||||||||||||||  |||  | |||||||||||||||| |||||||    
T  47732167 aattgattctgactaaaagtgagttgcgggtggattgatttgtgtttagattcattcat 47732225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 47899411 - 47899349
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttta 187  Q
    ||||| |||||||||||||||||||  |||||||||||||| || |||| | |||||| ||||    
T  47899411 gaattgattttgtaaaattgattcttactaaaagtgagttgcagataaaataatttgtattta 47899349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 213246 - 213291
Alignment:
Q  163 ttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| |||||||||||| ||||| ||||||| |||||||||||||    
T  213246 ttgaatgtaaagtgatttatgtttggatacatgcatgtaaaagtga 213291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 1233429 - 1233380
Alignment:
Q  159 tgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||| |||||||| | |||| ||||||||||||||||||| |||||||    
T  1233429 tgagtttaaggtaaaataatttatgtttagatacattcatgtgaaagtga 1233380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 1514376 - 1514288
Alignment:
Q  224 aaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattc 313  Q
    |||||||||||||||||| |||||||||| |  ||| | |||||| ||||| || ||||  | ||||||||||||||||| ||| |||||    
T  1514376 aaaagctacaaatcctagcttcaagtagaataaattttggagacagaatcagttttact-gacagcaaccaaacatgtcagaattaattc 1514288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 14515375 - 14515432
Alignment:
Q  264 agacaaaatcaattctactcaaaagcaaccaaacatgtc-aaaatcaattctacacct 320  Q
    |||||||||||||||||||| | ||||| ||||||| || |||||||||| |||||||    
T  14515375 agacaaaatcaattctactcgagagcaatcaaacatatcaaaaatcaattttacacct 14515432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 52339665 - 52339738
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||| ||||||  ||||| ||||||||||||||| | |||| | |||| |||||||| |||||| ||||    
T  52339665 tgtaaaatttattctgcttaaaattgagttgaaggtaaaattatttatatttatatacattcgtgtaaatgtga 52339738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 2099784 - 2099840
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    |||||||||||||| | | ||| |||||| |||| ||||||||||||||||| ||||    
T  2099784 aatcaattctactcgacatcaatcaaacaagtcataatcaattctacacctccagaa 2099840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 5407967 - 5407879
Alignment:
Q  125 gaattaattttgtaaaattgattctg-tctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatttg 212  Q
    ||||| ||||||||||| ||||| || |  |||||||| ||||| || ||||||||| ||||| || |  |||||||||||||||||||    
T  5407967 gaattgattttgtaaaaatgattttggtgaaaaagtgaattgaatgtgaagtgatttatgtttggaaaggttcatgtaaaagtgatttg 5407879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 6932126 - 6932194
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||| |||||||||||||||| ||||| |||| |  |||| ||| ||||| |||||| ||||    
T  6932126 aattgattctgactaaaagtgagttgaatgtaaaatgatcttcgtttggattcattcgtgtaaaggtga 6932194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 14105035 - 14105099
Alignment:
Q  301 tcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||| ||||||||| | |||||  |||||||  | ||||||||||||||| ||||||||||    
T  14105035 tcaaaatctattctacacatgtagaatcaattttgaattctccaaaagtggaactaaacatacac 14105099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 18325053 - 18325117
Alignment:
Q  143 tgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    ||||| || |||||||| | |||||  ||||||||||| ||| | ||||||||||||||||||||    
T  18325053 tgattttggctaaaagtcacttgaatataaagtgatttatgtatggatacattcatgtaaaagtg 18325117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 23052138 - 23052190
Alignment:
Q  155 aaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    ||||||||||||| ||||| |||| | || ||| |||||||||||||||||||    
T  23052138 aaagtgagttgaatgtaaattgatgtttgattatatacattcatgtaaaagtg 23052190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 23052399 - 23052431
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctct 322  Q
    |||||||| ||||||||||||||||||||||||    
T  23052399 aaccaaacttgtcaaaatcaattctacacctct 23052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 28024591 - 28024539
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    ||||||||||||| || |||||||||||| |||||| ||||| | ||||||||    
T  28024591 ctaaaagtgagttaaatgtaaagtgatttttgtttacatacagttatgtaaaa 28024539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 28083831 - 28083898
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||| || |||| ||||| ||||| ||||| | |||||||||| |||| ||||||||||||||||    
T  28083831 aattgattatgactaagagtgaattgaatgtaaatt-atttgtgtttggatatattcatgtaaaagtga 28083898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 29759766 - 29759710
Alignment:
Q  136 gtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatac 192  Q
    |||||||||||| ||  ||||||||||||||| ||||| |||||| ||||| |||||    
T  29759766 gtaaaattgattatggttaaaagtgagttgaatgtaaaatgatttatgtttggatac 29759710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 30557483 - 30557447
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  30557483 aaccaaacatgtcagaatcaattctacacctccagaa 30557447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 30557613 - 30557577
Alignment:
Q  172 aagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  30557613 aagtgatttgtgtttggatacattcatataaaagtga 30557577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 52013602 - 52013670
Alignment:
Q  297 catgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||   |  ||||||||| ||||||||| | ||||||||||| |||||||| |||||    
T  52013602 catgtcaaaatcaatcacatgcctctagaattaattttggctcctccaaaagtgaaaccaaacgtacac 52013670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 6e-26; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 45557508 - 45557440
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45557508 aattgattctgactaaaagtgagttgaaggtaaagtgatttgtgtttggatacattcatgtaaaagtga 45557440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 40491736 - 40491653
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  40491736 gaattgattctgtaaaattgattttgactaaaagtgagttgaaggtaaagtgatttatttttggatacattcatgtaaaagtga 40491653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 360
Target Start/End: Original strand, 38123746 - 38123836
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaaca 360  Q
    |||||||||||||  | || |||||||||||| ||||||||||||||| ||||||||  |||||||| | |||||||||||||||||||||    
T  38123746 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaagtggaaccaaaca 38123836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 1442719 - 1442642
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatttg 212  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||| ||| | ||||||||||||||||  |||||||    
T  1442719 tgtaaaattgattctgactaaaagtgagttgcaggtaaagtggtttatgtatggatacattcatgtaaacatgatttg 1442642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 12306724 - 12306667
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctag 324  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  12306724 caaaatcaattctacttgagagcaaccaaacatgtcaaaatcaattctacacctctag 12306667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 17111862 - 17111797
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttg 335  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||| ||||||||    
T  17111862 aatcaattctactcgaaagcaaccaaacatgtcagaatcaattcgacatctctagaattaattttg 17111797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 33853426 - 33853491
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaag 205  Q
    ||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  33853426 aattgattctggctaagagtgagttgaagctaaagtgatttatgtttggatacattcatgtaaaag 33853491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 12306866 - 12306798
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||| ||||||||||||||||| ||||||||||| ||||| | || ||||||||||||||||    
T  12306866 aattgattctggctaaaagtgagttgaagataaagtgatttatgtttggctagattcatgtaaaagtga 12306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 12306967 - 12306913
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctc 321  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  12306967 caaaatcaattctactcaagagcaaccaaacatgtcaaaatcaattttgcacctc 12306913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 267 - 365
Target Start/End: Complemental strand, 15050282 - 15050185
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||   | || ||||||||| ||||||||||||||| ||| |||||||  |||||||| | |||| |||||||||||||||||||||    
T  15050282 caaaatcaattctacatgagagtaaccaaacaggtcaaaatcaattcttcacttctagaatcaattttggctcctcc-aaagtggaaccaaacatacac 15050185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 38123607 - 38123676
Alignment:
Q  139 aaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||| || |||||| ||||||||||||||||| |||||||||  || ||||||||||||||||||    
T  38123607 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtga 38123676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 41386858 - 41386955
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||||||| |||||||||||||||||| |||||||||| || ||| |  ||   ||||||||| ||||| ||||||| ||||||||||| ||||||||    
T  41386858 tctagaattaaaagctacaaatcctagcttcaagtagaatcaattctgaaggtgaaatcaattatactcgaaagcaatcaaacatgtcagaatcaatt 41386955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 336
Target Start/End: Complemental strand, 45004975 - 45004906
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttgg 336  Q
    ||||||||||| ||||  | || |||||||||||||||||||||||||||||||||||||  ||||||||    
T  45004975 caaaatcaattatactagagagtaaccaaacatgtcaaaatcaattctacacctctagaatcaattttgg 45004906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 39734628 - 39734692
Alignment:
Q  114 tgtggtggcaagaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgat 178  Q
    ||||||| |||||||| |||||||||||||||||||  |||||| |||||| |||||||||||||    
T  39734628 tgtggtgacaagaattgattttgtaaaattgattctagctaaaactgagtttaaggtaaagtgat 39734692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 24951156 - 24951239
Alignment:
Q  227 agctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaa 310  Q
    ||||||||||| ||| || ||||||| |||||| || |||||||||||||| |||||||||  ||||||||||  |||||||||    
T  24951156 agctacaaatcttagatttaagtagaatcgattctaaagacaaaatcaattatactcaaaactaaccaaacataacaaaatcaa 24951239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 40491620 - 40491518
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||||||||||||| | ||  ||||||||||||| ||| |  || ||||||||||| |  || ||||||||||| ||||| | ||||||||||    
T  40491620 tctagaatcaaaagctacaaaacttaacttcaagtagagtcaattctgaaggcaaaatcaattatcttcgaaagcaaccaaccatgttagaatcaattct 40491521  T
Q  315 aca 317  Q
    |||    
T  40491520 aca 40491518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 40561714 - 40561768
Alignment:
Q  154 aaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||| ||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  40561714 aaaattgagttgaaagtaaagtgatttatgtttggatacattcatgtaaaagtga 40561768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 40795917 - 40796003
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatttg 212  Q
    |||| ||||||||||||||||  |   ||||| ||| |||||||||||||| ||| || || |||||||||||||||||||||||||    
T  40795917 aattgattttgtaaaattgatgttaggtaaaaatgaattgaaggtaaagtggtttatgattggatacattcatgtaaaagtgatttg 40796003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 29829311 - 29829368
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattca 197  Q
    ||||||||||| |||||| ||||||||| |||||||||||| ||||| ||||||||||    
T  29829311 aattgattctggctaaaaatgagttgaatgtaaagtgatttatgtttggatacattca 29829368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 36271012 - 36270911
Alignment:
Q  225 aaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctag 324  Q
    |||||||||||||| |  |||||||||| |  ||| ||||| ||||||||||||||||  | || ||||||||||  |||||||||||  ||||||||||    
T  36271012 aaagctacaaatcccaacttcaagtagaataaattctagaggcaaaatcaattctactagagagaaaccaaacatcacaaaatcaatttcacacctctag 36270913  T
Q  325 aa 326  Q
    ||    
T  36270912 aa 36270911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 17111988 - 17111924
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    |||||||| || |||||| ||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  17111988 aattgattttgactaaaattgaattgtaggtaaagtgatttgtgtttggatgcattcatgtaaaa 17111924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 25156338 - 25156275
Alignment:
Q  145 attctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||| |||||| |||||||||| |||| ||||||||||||  |||||||||| |||||||||    
T  25156338 attctgactaaaaatgagttgaagataaaatgatttgtgtttgaatacattcatataaaagtga 25156275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 26023934 - 26023883
Alignment:
Q  161 agttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatttg 212  Q
    ||||||| |||||||||||||||||| |||||||| |||||||||| |||||    
T  26023934 agttgaatgtaaagtgatttgtgttttgatacatttatgtaaaagttatttg 26023883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 598071 - 598137
Alignment:
Q  298 atgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    |||||||||||||||| ||||||||||||  |||| || || |||||||||||||  ||||||||||    
T  598071 atgtcaaaatcaattccacacctctagaatcaattctgctttctccaaaagtggagtcaaacataca 598137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 23140422 - 23140340
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||| ||||||| ||||||||| || |||||||||| | |||  |||||||||||||||||||||| |||  || ||||||||    
T  23140422 aattgattttgtcaaattgattatgactaaaagtgattagaaaataaagtgatttgtgtttagatatatttttgaaaaagtga 23140340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 883418 - 883345
Alignment:
Q  293 caaacatgtcaaaatcaattctacacctctagaaataa-ttttggttactccaaaagtggaaccaaacatacac 365  Q
    |||| ||||||||||||| |||||||||||||||  || |||| |||  | |||||||||||||||||||||||    
T  883418 caaatatgtcaaaatcaactctacacctctagaatcaatttttcgttttttcaaaagtggaaccaaacatacac 883345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 1242747 - 1242674
Alignment:
Q  293 caaacatgtcaaaatcaattctacacctctagaaataa-ttttggttactccaaaagtggaaccaaacatacac 365  Q
    |||| ||||||||||||| |||||||||||||||  || |||| |||  | |||||||||||||||||||||||    
T  1242747 caaatatgtcaaaatcaactctacacctctagaatcaatttttcgttttttcaaaagtggaaccaaacatacac 1242674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 41788305 - 41788260
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattcta 315  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||||    
T  41788305 aatcatttctactcaagagcaaccaaacatgccaaaatcaattcta 41788260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 45005010 - 45004965
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||||||||||||| || | ||||||||||||||||||||||||||    
T  45005010 caaaatcaattctattcgagagcaaccaaacatgtcaaaatcaatt 45004965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 326
Target Start/End: Original strand, 5267774 - 5267834
Alignment:
Q  268 aaaatcaattctactcaaaag-caaccaaacatgtcaaaa-tcaattctacacctctagaa 326  Q
    ||||||||||||||| ||||  |||||||||||||||||| |||||| |||||||||||||    
T  5267774 aaaatcaattctactaaaaaaacaaccaaacatgtcaaaaatcaattatacacctctagaa 5267834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 312
Target Start/End: Original strand, 5489894 - 5489986
Alignment:
Q  220 aatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    ||||||||||| ||| | ||||  ||||||||| || ||| | ||| |||||| |||||||||||  ||||||||||||||| | ||||||||    
T  5489894 aatcaaaagctccaatttctagcatcaagtagaatcaattttggaggcaaaattaattctactcaggagcaaccaaacatgtaagaatcaatt 5489986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 7087386 - 7087454
Alignment:
Q  266 acaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataatttt 334  Q
    |||||||||||||||||| ||| ||  ||||||||||||| | ||||| |||| ||||||| |||||||    
T  7087386 acaaaatcaattctactcgaaaacattcaaacatgtcaaagtgaattccacacttctagaattaatttt 7087454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 337
Target Start/End: Complemental strand, 22195904 - 22195784
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    |||||||||||| |||||||| ||| || ||||| | || ||| |   |||| |||||||||||||| | |  || ||||||||||| ||| |||| |||    
T  22195904 tagaatcaaaagttacaaatcatagcttaaagtaaaatcaattttgaggacataatcaattctactcgacaataatcaaacatgtcataattaattttac 22195805  T
Q  317 acctctagaaataattttggt 337  Q
    ||||||||||  |||||||||    
T  22195804 acctctagaatcaattttggt 22195784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 27572005 - 27571937
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||| || ||||||||||||| |||||||| |||||| || || |||||||| ||||||| ||||    
T  27572005 aattgattatggctaaaagtgagttaaaggtaaaatgatttatggttggatacatttatgtaaatgtga 27571937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 44856719 - 44856779
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttt 186  Q
    |||| |||| ||||| ||||||||| |||||||||||||||| |||||| ||||| |||||    
T  44856719 aattgatttggtaaagttgattctgcctaaaagtgagttgaatgtaaagcgatttatgttt 44856779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 15311203 - 15311274
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattca 197  Q
    |||| ||| ||||||||||| | ||  ||||||||||||||| ||| |||||||| ||||| ||||||||||    
T  15311203 aattgattgtgtaaaattgaatatggttaaaagtgagttgaatgtatagtgatttatgtttggatacattca 15311274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 18350120 - 18350175
Alignment:
Q  154 aaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgat 209  Q
    |||||||||||||| ||||| |||||| |||||| ||||||||| | |||||||||    
T  18350120 aaaagtgagttgaatgtaaaatgatttatgtttacatacattcacgaaaaagtgat 18350175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 322
Target Start/End: Complemental strand, 27571904 - 27571797
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||||||||||| ||| | |||  |||||||||| || ||| | |||  |||||||||| ||||| | ||||| |||||||||   | ||||||||    
T  27571904 tctagaatcaaaagctccaatttctaacttcaagtagaatcaattcttgaggtaaaatcaattatactcgagagcaatcaaacatgtaggagtcaattct 27571805  T
Q  315 acacctct 322  Q
    ||||||||    
T  27571804 acacctct 27571797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 42344655 - 42344694
Alignment:
Q  163 ttgaaggtaaagtgatttgtgtttagatacattcatgtaa 202  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  42344655 ttgaagataaagtgatttgtgtttagatatattcatgtaa 42344694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 44365541 - 44365612
Alignment:
Q  137 taaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||||   |||||||| | |||||||||||||||||| || |  |||||||| ||||||||||||    
T  44365541 taaaattgattccaactaaaagtaaattgaaggtaaagtgatttatgataggatacattaatgtaaaagtga 44365612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 18228155 - 18228105
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  18228155 caaaatcaattttacttaaaaacaaccaaacatttgaaaatcaattctaca 18228105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 352
Target Start/End: Original strand, 22310760 - 22310846
Alignment:
Q  266 acaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtgga 352  Q
    ||||||||||||||| || | || |||||||||| |||||||||||| |||| || |||||  |||||| | |||| ||| ||||||    
T  22310760 acaaaatcaattctattcgagagtaaccaaacatatcaaaatcaattatacatctttagaatcaattttagctacttcaagagtgga 22310846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 26984533 - 26984635
Alignment:
Q  225 aaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac-acctcta 323  Q
    ||||||||||||| ||| |||||||||| || ||| || | |||||||||| ||||||  ||| ||  |||||||   |||||||||||||| |||||||    
T  26984533 aaagctacaaatcttagcttcaagtagaatcaattctacaaacaaaatcaagtctactttaaatcattcaaacatcataaaatcaattctacaacctcta 26984632  T
Q  324 gaa 326  Q
    |||    
T  26984633 gaa 26984635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 28430288 - 28430338
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacct 320  Q
    |||||||||||||||||| |||  |||||| |||||||||||| |||||||    
T  28430288 aatcaattctactcaaaaacaattaaacatatcaaaatcaattttacacct 28430338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 32697637 - 32697707
Alignment:
Q  136 gtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    ||||||||||||||   |||||||||||||||  |||||  |||||||||| |||| |||| |||||||||    
T  32697637 gtaaaattgattctacttaaaagtgagttgaaaataaagatatttgtgtttggatatattcttgtaaaagt 32697707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 41010085 - 41010035
Alignment:
Q  154 aaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    |||| ||| ||||||||||||| |||| ||||| |||||||||||||||||    
T  41010085 aaaattgaattgaaggtaaagtaatttatgtttggatacattcatgtaaaa 41010035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 312
Target Start/End: Complemental strand, 48158878 - 48158836
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||||||| ||||| | ||||||||||||||||||||||||||    
T  48158878 aatcaattttactcgagagcaaccaaacatgtcaaaatcaatt 48158836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 48253136 - 48253061
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||||| |||||||||||||||||||| |||  ||||| ||  ||||||  ||||||||| |||| |||||||||||||    
T  48253136 agcaaacaaacatgtcaaaatcaattttacctctctataatcaatttt--ttactccaacagtgaaaccaaacataca 48253061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 28070857 - 28070788
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacatt 195  Q
    ||||||||||||||||||||||    || ||| ||||||||| || ||||| ||| ||||||||||||||    
T  28070857 aattaattttgtaaaattgatttcaactgaaattgagttgaatgtcaagtggtttctgtttagatacatt 28070788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 29842227 - 29842167
Alignment:
Q  141 attgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaa 202  Q
    ||||||| || |||||| || ||||||||||||||||||||||||| |||| |||| |||||    
T  29842227 attgattttgactaaaa-tgggttgaaggtaaagtgatttgtgtttggatagattcgtgtaa 29842167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 365
Target Start/End: Complemental strand, 46325636 - 46325567
Alignment:
Q  296 acatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||| |||||||||||||||||| || | || ||| ||||||| ||| | ||||| ||||||||||||||    
T  46325636 acatatcaaaatcaattctacacatccaaaattaaatttggtttctctagaagtgaaaccaaacatacac 46325567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 3141014 - 3141082
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||| |||| |||||||||||| ||||||||||||  || |||||  || | |||||||||||    
T  3141014 aattgattctttctacaagtgagttgaatgtaaagtgatttaggtctagatgtatccctgtaaaagtga 3141082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 42481817 - 42481877
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtt 185  Q
    ||||| ||| ||||||||||||||||   |||||||||||||| ||||| |||||| ||||    
T  42481817 gaattgattatgtaaaattgattctgaaaaaaagtgagttgaatgtaaaatgatttatgtt 42481877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 48868559 - 48868499
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttt 186  Q
    |||| |||||||||||||||||  | | | || |||||||||||||||||| |||||||||    
T  48868559 aattgattttgtaaaattgatttcgacaataaatgagttgaaggtaaagtgttttgtgttt 48868499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 215 - 321
Target Start/End: Complemental strand, 35065105 - 35064999
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||||||  |||||| |||| |||||||| | || ||||| ||| ||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  35065105 tctagaatcaaaagtcacaaatactagcttcaagtaaaatcaattattgaggcaaaatcaattctactcgaaagcaaccaaaaatgtcataatcaattct 35065006  T
Q  315 acacctc 321  Q
    |||||||    
T  35065005 acacctc 35064999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 365
Target Start/End: Complemental strand, 2635153 - 2635055
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||| ||||| |||||||  |||||||||  ||| ||||||| ||||||||||||||    
T  2635153 caaaatcagttctacttaaaagcaatcaaacatgtcaaaatcaattttacacttctagaatcaattttggtccctctaaaagtgaaaccaaacatacac 2635055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 225 - 315
Target Start/End: Complemental strand, 25319080 - 25318989
Alignment:
Q  225 aaagctacaaatcctagtttcaagt-agagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattcta 315  Q
    ||||||||||||||||  ||||||| ||| || ||| | ||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  25319080 aaagctacaaatcctaccttcaagttagaatcaattctggagacaaaatcaattctactcgagagcaaccaaacatgtcaaaatcaattcta 25318989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 33560615 - 33560710
Alignment:
Q  217 tagaatcaaaagctacaaatcctag-tttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaat 311  Q
    |||| |||||||||||||||||||| ||||   |||| || ||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||    
T  33560615 tagactcaaaagctacaaatcctagctttcggttagaatcaattctagaggcaaaatcaattctactcgagagcaaccaaacatgtcaaaatcaat 33560710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 270 - 365
Target Start/End: Original strand, 49138933 - 49139028
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||| ||||  ||| ||||||||||||||| ||||||||||||||||||||||  ||||||||  |||  | ||||||||||||||||||||    
T  49138933 aatcaattttacttgaaaacaaccaaacatgtcagaatcaattctacacctctagaatcaattttggccactttagaagtggaaccaaacatacac 49139028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 367
Target Start/End: Complemental strand, 1099826 - 1099726
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacacg 366  Q
    ||||||||||||| ||| | |||||||||| || |||||||||||||| || ||||||||  |||||||  | |||||||||||| |||||||||| |||    
T  1099826 caaaatcaattctgctcgagagcaaccaaatatttcaaaatcaattctgcatctctagaatcaattttgtctcctccaaaagtggtaccaaacataaacg 1099727  T
Q  367 a 367  Q
    |    
T  1099726 a 1099726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 215 - 302
Target Start/End: Original strand, 32818413 - 32818500
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtc 302  Q
    |||||||||||||||||||||| |||| ||||| |||| || ||| | ||| ||||||||||||||||| |||| ||||||| |||||    
T  32818413 tctagaatcaaaagctacaaattctagcttcaaatagaatcaattctggaggcaaaatcaattctactcgaaagaaaccaaatatgtc 32818500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 43868294 - 43868211
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||||||||||||| |||||   ||||||| ||||||| |||||||||||||| ||| |||||||| ||||||||||||    
T  43868294 gaattgattttgtaaaattaattctagttaaaagtaagttgaaagtaaagtgatttgtctttggatacatttatgtaaaagtga 43868211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 361
Target Start/End: Complemental strand, 16551999 - 16551853
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||  |||| ||||||||||||| |||||| ||| || ||  ||||| || |||||  |||| || | |||||||| |||||||| ||||||||||    
T  16551999 tctagaactaaaaactacaaatcctagcttcaaggagaatccatcctagaggcagaatcagctctattcgacagcaaccatacatgtcagaatcaattct 16551900  T
Q  315 acacctctagaaataattttggttactccaaaagtggaaccaaacat 361  Q
    ||||||||| ||  ||||||| |  |||  |||||||||||||||||    
T  16551899 acacctctaaaatcaattttgatctctctgaaagtggaaccaaacat 16551853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 26617712 - 26617781
Alignment:
Q  257 attatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    ||||| ||| |||||||||||||| | ||||||| ||||||||||||||||||||| ||||| |||||||    
T  26617712 attatggaggcaaaatcaattctattgaaaagcatccaaacatgtcaaaatcaattttacacatctagaa 26617781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 363
Target Start/End: Complemental strand, 32680752 - 32680655
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttgg-ttactccaaaagtggaaccaaacatac 363  Q
    ||||||||||||| || |||||||||||| |||| |||||||||||||| ||   |||||  |||||||| || ||| ||||||||||||||||||||    
T  32680752 caaaatcaattctgcttaaaagcaaccaatcatggcaaaatcaattctaaacaagtagaaccaattttggcttcctcaaaaagtggaaccaaacatac 32680655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 24338566 - 24338492
Alignment:
Q  292 ccaaacatgtcaaaatcaattctacacctctagaaataa--ttttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||||||| | ||||||||| ||||||  |||||  ||||||||||||||||||||||||||||    
T  24338566 ccaaacatgtcaaaatcaatccaacacctcta-aaataaagttttgactactccaaaagtggaaccaaacatacac 24338492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 33843854 - 33843786
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||| |||||||||||||| | |||||||||||| ||||| |||| |||||||||| |||||    
T  33843854 aattgattctggctaaaagtgagttggatgtaaagtgatttatgtttggatatattcatgtaatagtga 33843786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 215 - 362
Target Start/End: Original strand, 50061671 - 50061825
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatg-------tcaaaat 307  Q
    ||||||||||||| ||||||||||||  |||||||||| || ||| | ||| ||||||||||||||||  | | ||| || |||||       ||| |||    
T  50061671 tctagaatcaaaaactacaaatcctaacttcaagtagaatcaattttggaggcaaaatcaattctactggacaacaatcagacatgttagaactcagaat 50061770  T
Q  308 caattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    |||||||| ||||| ||||  |||||||||| ||| | |||||||||||||||||    
T  50061771 caattctagacctccagaatcaattttggttcctctagaagtggaaccaaacata 50061825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 2206692 - 2206601
Alignment:
Q  117 ggtggcaagaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||| ||| |||| |||||||||||||||||||| | |||| |||||||||||| ||||||||| | ||| ||| |||| |||| |||||||    
T  2206692 ggtgacaaaaattgattttgtaaaattgattctgacgaaaattgagttgaaggtgaagtgatttatttttggatgcattaatgtgaaagtga 2206601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 9064273 - 9064162
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtca-aaatcaattc 313  Q
    ||||||||||||| |||||||| ||||||||||||||| || ||||| | | |||| | ||||||| || | | ||||||||||||| | || | |||||    
T  9064273 tctagaatcaaaaactacaaattctagtttcaagtagaatcaattatggtggcaaatttaattctattcgacaacaaccaaacatgttagaattaaattc 9064174  T
Q  314 tacacctctaga 325  Q
    ||||||||||||    
T  9064173 tacacctctaga 9064162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 22250384 - 22250301
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||| ||||||||||||| || ||||||| |||||||| || |||||||||   ||| |||||||||||||||||||||    
T  22250384 gaattgattctgtaaaattgattatgactaaaagcgagttgaatgtgaagtgatttacatttggatacattcatgtaaaagtga 22250301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 362
Target Start/End: Complemental strand, 41058916 - 41058821
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||||| ||||| ||| || |||||||||||| |||||||||||| ||| |||||  ||||| || |  || |||||||||||||||||||    
T  41058916 caaaatcaattttactcgaaaacatccaaacatgtcacaatcaattctactcctttagaatcaatttaggctcatctaaaagtggaaccaaacata 41058821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 321
Target Start/End: Original strand, 42152979 - 42153030
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctc 321  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  42152979 aatcaattctactcaagagcaatcaaacatgtcaaaataaattctacacctc 42153030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 215 - 365
Target Start/End: Original strand, 2326854 - 2327004
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||| ||||| ||||||| |||||||| | |||| || ||| | | |||| || ||||||| |   ||| ||||||||||||||| ||||||||||    
T  2326854 tctagaattaaaagttacaaattctagtttcgaatagaatcaattctggtgacagaaacaattcttcatgaaatcaaccaaacatgtcataatcaattct 2326953  T
Q  315 acacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    | ||||| | || ||||| ||||  | | ||||||| ||||||||||||||    
T  2326954 atacctccataattaattatggtcccactaaaagtgaaaccaaacatacac 2327004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 17898057 - 17898138
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||| |||||||| ||||||||||| || ||||||||||||| |||||||||||| ||||| |||| ||| | ||||||||||    
T  17898057 aattgattttgtataattgattctg-ctgaaagtgagttgaatgtaaagtgatttatgtttggatatatttaggtaaaagtga 17898138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 1023855 - 1023928
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||| ||||| |  ||||||||||||||||||||||||||||| ||||| |||| ||| |||| |||||||    
T  1023855 tgtaaaaatgattttagctaaaagtgagttgaaggtaaagtgatttttgtttggatatattgatgtgaaagtga 1023928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 20712756 - 20712817
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgta 201  Q
    ||||||||| | |||||| ||||||||||||||||| |||||||||| |||||| |||||||    
T  20712756 aattgattccgactaaaaatgagttgaaggtaaagttatttgtgtttggatacaatcatgta 20712817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 318
Target Start/End: Complemental strand, 33456414 - 33456313
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    ||||||||||||||||||||| |||||| || |||| |  ||| |||||||  ||||||||||| || | | |||| ||| |||||| ||||||||||||    
T  33456414 tagaatcaaaagctacaaatcatagttttaaatagaataaattctagagacggaatcaattctagtcgacaccaacaaaatatgtcataatcaattctac 33456315  T
Q  317 ac 318  Q
    ||    
T  33456314 ac 33456313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 362
Target Start/End: Complemental strand, 39438752 - 39438683
Alignment:
Q  293 caaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    |||||||||||||||||||| |||||||| | ||  |||||||  ||||||||| |||||||||||||||    
T  39438752 caaacatgtcaaaatcaattttacacctccaaaatcaattttgactactccaaacgtggaaccaaacata 39438683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 43868169 - 43868092
Alignment:
Q  224 aaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgt 301  Q
    |||||||||||||| || |||||| |||| || ||| | |||||||||| |||||||||  |||||||||||||||||    
T  43868169 aaaagctacaaatcttaatttcaaatagaatcaattgtggagacaaaattaattctactagaaagcaaccaaacatgt 43868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 38740301 - 38740369
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagataca 193  Q
    ||||| ||||||||||||||||| ||  |||||||||||||||| | ||||||||| ||||| ||||||    
T  38740301 gaattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggataca 38740369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 337
Target Start/End: Complemental strand, 9134652 - 9134529
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||| |||||||||||||||||  ||| |||||||||  || ||| | ||   ||||||||||| |||| | | |||| ||||||||||||||||| | |    
T  9134652 tctaaaatcaaaagctacaaattttagcttcaagtaggatcaattctggaagtaaaatcaattccactcgataacaactaaacatgtcaaaatcaaatat 9134553  T
Q  315 acacctctagaaa-taattttggt 337  Q
    ||||||| ||||| ||||||||||    
T  9134552 acacctccagaaattaattttggt 9134529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 21691318 - 21691409
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacat 361  Q
    ||||||| |||||| | | |||||||| |||||| ||||||||||||||||| ||||  |||| ||||  ||| | ||||||||||||||||    
T  21691318 aatcaatactactcgacaacaaccaaatatgtcagaatcaattctacacctccagaatcaattctggtccctctagaagtggaaccaaacat 21691409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 36639951 - 36639877
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgta 201  Q
    |||| ||||||||||| ||||| || || ||| |||||||||| ||||||||||| ||||| ||||||||||||||    
T  36639951 aattgattttgtaaaactgattatgacttaaa-tgagttgaagataaagtgatttatgtttggatacattcatgta 36639877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 362
Target Start/End: Complemental strand, 45329816 - 45329741
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||||||||| ||| |||||| |||||||||| ||  |||||||| |  | ||||||||||||||||||||    
T  45329816 agcaaccaaacatgttaaagtcaattttacacctctataatcaattttggctcttacaaaagtggaaccaaacata 45329741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 321
Target Start/End: Original strand, 46344878 - 46344980
Alignment:
Q  218 agaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    |||||||||||||  |||| |||  |||||||||| |  ||||| ||| ||||||||||| ||||  ||||||||||||||||||| ||| |||| ||||    
T  46344878 agaatcaaaagctggaaattctaacttcaagtagaata-attatggaggcaaaatcaattatacttgaaagcaaccaaacatgtcagaattaattataca 46344976  T
Q  318 cctc 321  Q
    ||||    
T  46344977 cctc 46344980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 55085125 - 55085196
Alignment:
Q  295 aacatgtcaaaatcaattctacacctctagaaataattttggt-tactccaaaagtggaaccaaacatacac 365  Q
    ||||||| ||||||||||||| ||||||||||  ||||||  | | ||||||||||||||||||||||||||    
T  55085125 aacatgttaaaatcaattctatacctctagaatcaatttttttctcctccaaaagtggaaccaaacatacac 55085196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 55927697 - 55927780
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| |||| |||||||||||||    ||||| ||||||| || ||| ||||||| ||||| |||||||||||||||||||||    
T  55927697 gaattgatttcgtaaaattgattccagttaaaattgagttggagttaatgtgatttatgtttggatacattcatgtaaaagtga 55927780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 2174297 - 2174347
Alignment:
Q  263 gagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattc 313  Q
    ||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  2174297 gagacaaaatcaattctactcactagcatccaaacatttcaaaatcaattc 2174347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 20712640 - 20712546
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacat 361  Q
    |||||||||||||| |  | ||||| ||| ||||| ||||||||||||| ||||||||||  |||||||  |  |||| ||||||||||||||||    
T  20712640 caaaatcaattctatttgagagcaaacaagcatgtaaaaatcaattctaaacctctagaatcaattttgcctcttccataagtggaaccaaacat 20712546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 32100286 - 32100192
Alignment:
Q  269 aaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatac 363  Q
    |||| |||||||| | | || |||||||  ||||||||||||||| | |||||||||| ||||||||| | ||||| || |||||| ||||||||    
T  32100286 aaataaattctacacgagagtaaccaaatttgtcaaaatcaattcaatacctctagaattaattttggcttctccataaatggaactaaacatac 32100192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 35065176 - 35065138
Alignment:
Q  170 taaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  35065176 taaagtgatttgtgtttggatacattcatgtaaaagtga 35065138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 8604590 - 8604631
Alignment:
Q  166 aaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  8604590 aaggtaaagtgatttatgtttggatacattcatgtaaaagtg 8604631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 266 - 326
Target Start/End: Complemental strand, 12926880 - 12926822
Alignment:
Q  266 acaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    |||||||| |||||||||||||||||||||| |||||  ||| |||||||||| |||||||    
T  12926880 acaaaatcgattctactcaaaagcaaccaaatatgtc--aattaattctacacttctagaa 12926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 35423217 - 35423128
Alignment:
Q  222 tcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaat 311  Q
    ||||||| || ||||  |||||||||||||| || |||||| ||| |||||||||| |||| |||| |||| ||| |||||| |||||||    
T  35423217 tcaaaagttataaattttagtttcaagtagaatcaattataaagataaaatcaattttacttaaaaacaactaaatatgtcagaatcaat 35423128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 50358134 - 50358207
Alignment:
Q  292 ccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||| ||||||||||||||||||||||||||||||  ||||||   | | ||| |||||||||| |||||||||    
T  50358134 ccaagcatgtcaaaatcaattctacacctctagaatcaattttttctccaccagaagtggaaccgaacatacac 50358207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 326
Target Start/End: Complemental strand, 25318808 - 25318749
Alignment:
Q  266 acaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    |||||||||||||||||||||| || |  |||||||| ||||||||| |||||||||||||    
T  25318808 acaaaatcaattctactcaaaaacatcttaacatgtc-aaatcaattatacacctctagaa 25318749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 32634157 - 32634085
Alignment:
Q  132 ttttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    |||||||||||| |||| || ||||||||| ||||| |||| ||||||| |||||  || |||||||||||||    
T  32634157 ttttgtaaaattaattccgtttaaaagtgacttgaatgtaatgtgatttatgtttgaatgcattcatgtaaaa 32634085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 41075954 - 41075898
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||| ||||||| |||||||||| ||||| ||| ||||||||||| |||||||||    
T  41075954 ctaaaaatgagttgtaggtaaagtggtttgttttttgatacattcatataaaagtga 41075898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 43076027 - 43075955
Alignment:
Q  293 caaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||| |||| |||||||||||| |||||||||||  |||||||  | |||||||||  |||||||||||||||    
T  43076027 caaatatgttaaaatcaattctgcacctctagaatcaattttgcctcctccaaaagcagaaccaaacatacac 43075955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 54487248 - 54487304
Alignment:
Q  154 aaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatt 210  Q
    |||||||||||||| ||||| |||||| ||||| |||||||| |||| |||||||||    
T  54487248 aaaagtgagttgaatgtaaattgatttatgtttggatacattgatgtgaaagtgatt 54487304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 7223182 - 7223104
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    ||||||||||| ||||||| ||| | | | |||||||||| ||| |||| |||||| ||||||||||||||||| |||||    
T  7223182 gaattaattttttaaaattaattttat-tgaaagtgagtttaagataaaatgatttatgtttagatacattcatttaaaa 7223104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 358
Target Start/End: Complemental strand, 8330156 - 8330013
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagt-agagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgt-caaaatcaattct 314  Q
    |||||||||||||| ||| | |||| ||||||| ||| || ||||| ||| || |||||||| ||||  | |||||||||||||||  ||||| |||| |    
T  8330156 tagaatcaaaagctccaatttctagcttcaagttagaatccattatggaggcagaatcaattttacttgagagcaaccaaacatgtaaaaaattaattat 8330057  T
Q  315 acacctctagaaataattttggttactccaaaagtggaaccaaa 358  Q
     |||||||||||  |||| ||| | ||||| ||||| |||||||    
T  8330056 tcacctctagaatcaattctggctcctccagaagtgaaaccaaa 8330013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 318
Target Start/End: Original strand, 11271582 - 11271685
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaag-tagagtcgattatagagacaaaatc-aattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||| |||||||||||||||||||| |||||| |||| || ||| | ||| ||||||| ||| | |||| | |||||||| || |||||||||||||| |    
T  11271582 tagactcaaaagctacaaatcctagcttcaagttagaatcaattctggaggcaaaatcaaataccactcgacagcaaccatacttgtcaaaatcaatttt 11271681  T
Q  315 acac 318  Q
    ||||    
T  11271682 acac 11271685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 17898359 - 17898437
Alignment:
Q  287 agcaaccaaacatgtcaaaa-tcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||| |||||| |||||| ||||||||||| |||||||| ||||||||| | ||| |||| ||||||| |||||||||    
T  17898359 agcaacaaaacatttcaaaaatcaattctacatctctagaattaattttgg-tcctctaaaactggaaccgaacatacac 17898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 22683853 - 22683806
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||| ||||||||| ||| | ||||||||||||||||||||    
T  22683853 caaaatcaattttactcaaaaacaaaccaacatgtcaaaatcaattct 22683806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 37353442 - 37353391
Alignment:
Q  261 tagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||||||||| |||||||||||| ||| ||| ||||||||| ||||||||||    
T  37353442 tagagacaaagtcaattctactcgaaaacaagcaaacatgttaaaatcaatt 37353391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 37365416 - 37365365
Alignment:
Q  261 tagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||||||||| |||||||||||| ||| ||| ||||||||| ||||||||||    
T  37365416 tagagacaaagtcaattctactcgaaaacaagcaaacatgttaaaatcaatt 37365365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 48045693 - 48045740
Alignment:
Q  139 aaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttt 186  Q
    |||||||||||| |||||| |||||||||| ||||||||||| |||||    
T  48045693 aaattgattctggctaaaactgagttgaagataaagtgatttatgttt 48045740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 365
Target Start/End: Original strand, 54705437 - 54705584
Alignment:
Q  219 gaatcaaaagctacaaatcctagtttcaag-tagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    ||||||||||||||||| ||||| |||||| |||  || ||||| ||| ||||||||||| ||||    ||||||||||||||||  |||||||| || |    
T  54705437 gaatcaaaagctacaaaccctagcttcaagttagtatcaattattgaggcaaaatcaattatacttgtgagcaaccaaacatgtctgaatcaattatata 54705536  T
Q  318 cctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||  | |   ||||||||   ||| | ||||||||||||||||||||    
T  54705537 ccttcatagccaattttggcccctctagaagtggaaccaaacatacac 54705584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 4243536 - 4243462
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtg-tttagatacattcatgtaaaagtga 208  Q
    |||||||||||||| | |||||||| || || |||||||||||||| || ||| || ||||| ||||||||||||    
T  4243536 tgtaaaattgattccgactaaaagtaagatgtaggtaaagtgatttttgttttggagacattgatgtaaaagtga 4243462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 312
Target Start/End: Complemental strand, 29728989 - 29728947
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    |||||||||||||| | ||||||||||| ||||||||||||||    
T  29728989 aatcaattctactcgagagcaaccaaacttgtcaaaatcaatt 29728947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 365
Target Start/End: Original strand, 47596391 - 47596489
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaa-aatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||| |||| ||||| | || || |||||||||||| |||||||||| ||||| || ||  ||||||| || ||||||||||| ||||| ||||||||    
T  47596391 aaaattaattatactctagagaaatcaaacatgtcaacaatcaattctccacctttaaaatcaattttgattcctccaaaagtgaaaccatacatacac 47596489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 25927438 - 25927381
Alignment:
Q  151 tctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||||||||| ||||| || ||| | ||| |||||||||| ||||||||||    
T  25927438 tctaaaagtgagttgaaagtaaaatgttttatatttcgatacattcacgtaaaagtga 25927381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 29114849 - 29114804
Alignment:
Q  153 taaaagtgagttgaaggtaaagtgatttgtgtttagatacattcat 198  Q
    |||||||||||||||||||  || |||||||||| |||||||||||    
T  29114849 taaaagtgagttgaaggtatggtaatttgtgtttggatacattcat 29114804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 29779106 - 29779199
Alignment:
Q  224 aaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    ||||||||||||| |||| |||||||||| || ||| || |  |||||||||||||  |  ||| || |||||||||  |||||||||||||||    
T  29779106 aaaagctacaaattctagcttcaagtagaatcaattctacaagcaaaatcaattctcttttaaatcatccaaacatgataaaatcaattctaca 29779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 30889829 - 30889764
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattcta 280  Q
    |||| ||||||||  |||||||| || || |||||||| || ||| ||||||||||||||||||||    
T  30889829 tctacaatcaaaatttacaaatcttaattgcaagtagaatcaattctagagacaaaatcaattcta 30889764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 365
Target Start/End: Original strand, 47315092 - 47315189
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||| |||| | || ||| ||||||||||||||  |||||||| ||| ||||  |||||||| |   | |||||||||| |||||||||||    
T  47315092 aaaatcaattcaactccagaggaacaaaacatgtcaaaatggattctacaactcaagaatcaattttggctctgctaaaagtggaatcaaacatacac 47315189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 359
Target Start/End: Original strand, 471963 - 472055
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaa-tcaattctacacctctagaaataattttggttactccaaaagtggaaccaaac 359  Q
    |||||||||||||||| | | ||  |||||||||||||| |||||||||||| |||||||  || |||   ||||||| ||||||||| ||||    
T  471963 aaaatcaattctactcgacaacattcaaacatgtcaaaaatcaattctacacttctagaatcaaatttacctactccagaagtggaactaaac 472055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 12667163 - 12667219
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||| ||||| ||||||||||||   ||| ||||||||||||| |||||||    
T  12667163 ctaaaagtgatttgaatgtaaagtgatttacctttggatacattcatgtgaaagtga 12667219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 28141105 - 28141045
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagata 191  Q
    |||| |||||||||||  |  ||||||||||||| |||||||| || ||||||||||||||    
T  28141105 atttcgtaaaattgatattagctaaaagtgagtttaaggtaaaatggtttgtgtttagata 28141045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 30889932 - 30889880
Alignment:
Q  128 ttaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgattt 180  Q
    ||||||||||||||||||||  |  ||||||||| | ||||||||||||||||    
T  30889932 ttaattttgtaaaattgatttagattaaaagtgaatagaaggtaaagtgattt 30889880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 31013850 - 31013926
Alignment:
Q  289 caaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||||||||||| ||||| |||| ||  |||| ||||| ||   ||| | |||||||||||||||    
T  31013850 caaccaaacatgtcaaaatcaattttacacatctaaaatcaattatggttcctttgaaaatagaaccaaacatacac 31013926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 33347228 - 33347308
Alignment:
Q  230 tacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaa 310  Q
    |||||||||||  |||||||||| |  ||| ||||| |||||| | || ||||||||||| |||||| |||||| ||||||    
T  33347228 tacaaatcctaccttcaagtagaattaattctagaggcaaaattacttatactcaaaagccaccaaatatgtcataatcaa 33347308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 34155851 - 34155811
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttg 165  Q
    ||||||||| |||||||||||||||  ||||||||||||||    
T  34155851 gaattaattatgtaaaattgattctaactaaaagtgagttg 34155811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 36150693 - 36150625
Alignment:
Q  124 agaattaattttg-taaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagata 191  Q
    |||||| |||||| || |||||||| ||  ||||||||||||||| |||||||||||| ||||| ||||    
T  36150693 agaattgattttgatataattgattttgattaaaagtgagttgaatgtaaagtgatttatgtttggata 36150625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 41751214 - 41751278
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    |||| ||| ||| |||||||||||| ||| ||||||||||  |||||  ||||||||||||||||    
T  41751214 aatttattttgtttaaaagtgagttcaagataaagtgattaatgtttgaatacattcatgtaaaa 41751278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 247
Target Start/End: Complemental strand, 45011916 - 45011884
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaa 247  Q
    |||||||||||||||||||||||| ||||||||    
T  45011916 tctagaatcaaaagctacaaatcccagtttcaa 45011884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 2e-23; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 217 - 361
Target Start/End: Original strand, 34250396 - 34250540
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    |||||||||||||||||| | ||||  ||||||||| || ||| ||||| || |||||||||||||| | || ||||||||||||||||| |||||||||    
T  34250396 tagaatcaaaagctacaatttctagcatcaagtagaatcaattctagaggcataatcaattctactctagagaaaccaaacatgtcaaaaacaattctac 34250495  T
Q  317 acctctagaaataattttggttactccaaaagtggaaccaaacat 361  Q
    || |||||||  |||| |   | || |||||||||||||||||||    
T  34250496 acatctagaatcaattataactccttcaaaagtggaaccaaacat 34250540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 364
Target Start/End: Original strand, 3043102 - 3043196
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||||||||||| ||  ||||||| |||||||||||||||||||||||||||||||||  ||||||| || ||||| ||||||||||| |||||||    
T  3043102 aatcaattctattcttaagcaactaaacatgtcaaaatcaattctacacctctagaatcaattttgattcctccataagtggaaccagacataca 3043196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 217 - 321
Target Start/End: Original strand, 6951350 - 6951453
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    ||||||||||||||||||||||||  |||||||||| || ||||||||||| || |  ||||||||| |||| ||| ||| |||||| ||||||||||||    
T  6951350 tagaatcaaaagctacaaatcctaacttcaagtagaatcaattatagagacgaact-gattctactcgaaagtaactaaatatgtcagaatcaattctac 6951448  T
Q  317 acctc 321  Q
    |||||    
T  6951449 acctc 6951453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 15368232 - 15368136
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    |||| ||||| |||||  ||| ||||| ||||||||||||||||||||||  |||||||  |||||||| | |||||||||||||||||||||||||    
T  15368232 aaaaacaattatactctgaaggaaccatacatgtcaaaatcaattctacatatctagaatcaattttggctcctccaaaagtggaaccaaacataca 15368136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 35138950 - 35139033
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||| |||||| |||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||| | |||||||    
T  35138950 gaattgattatgtaaacttgattctgtctaaaattgagttgaaggtaaaatgatttatgttcagatacattcatatgaaagtga 35139033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 29922888 - 29922786
Alignment:
Q  263 gagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||||||||||| ||| | | ||||||||||||||||||||||||||||||  ||||||  |||||||  | ||| ||||||||||  |||||||    
T  29922888 gagacaaaatcaattctgctcgagaacaaccaaacatgtcaaaatcaattctacactactagaatcaattttgactcctcaaaaagtggaagtaaacata 29922789  T
Q  363 cac 365  Q
    |||    
T  29922788 cac 29922786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 10898718 - 10898629
Alignment:
Q  261 tagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtg 350  Q
    ||||| ||||||||||| ||||| | ||||||||||||||||||||| ||||| ||| ||||||||  ||||||| || |||||||||||    
T  10898718 tagaggcaaaatcaattttactcgagagcaaccaaacatgtcaaaattaattcgacagctctagaatcaattttgattcctccaaaagtg 10898629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 362
Target Start/End: Complemental strand, 39097251 - 39097159
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||||||   ||| ||||||||||||||||||||||||||||||||||| ||  ||||| |||  ||| ||||||| |||||||||||    
T  39097251 aatcaattctacctgaaaccaaccaaacatgtcaaaatcaattctacacctctataatcaatttcggtctctctaaaagtgaaaccaaacata 39097159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 14299372 - 14299262
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||| |||| ||||||||||||  |||||||||| || ||| || |  ||||||||||| || || ||| |||||||| ||| || ||||||||||    
T  14299372 tctagaataaaaaactacaaatcctaacttcaagtagaatcaattttaaaagcaaaatcaattttattcgaaaacaaccaaatatgccagaatcaattct 14299273  T
Q  315 acacctctaga 325  Q
    |||||||||||    
T  14299272 acacctctaga 14299262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 267 - 369
Target Start/End: Complemental strand, 37121575 - 37121473
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacacg 366  Q
    ||||||||||| || |||| |||||| ||||||| |||||  ||| ||||||||||||||  |||||||| | ||| | || ||||||||||||||||||    
T  37121575 caaaatcaattatagtcaagagcaactaaacatgacaaaaataatgctacacctctagaatcaattttggctcctctacaaatggaaccaaacatacacg 37121476  T
Q  367 aag 369  Q
    |||    
T  37121475 aag 37121473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 14299484 - 14299423
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttt 186  Q
    ||||| ||| |||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  14299484 gaattgattgtgtaaaattgattctagataaaagtgagttgaaggtaaagtgatttgtgttt 14299423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 364
Target Start/End: Original strand, 18851125 - 18851274
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||| |||||||||||||||||| ||| |||||||||| || ||||||| || |  |||||||||| |  | |||||||||||| |||| | ||||||||    
T  18851125 tctataatcaaaagctacaaatcatagcttcaagtagaatcaattatagggataggatcaattctaattgatagcaaccaaacacgtcagagtcaattct 18851224  T
Q  315 acacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||| ||| | ||  |||||||||  ||| | ||| |||| ||||||||||    
T  18851225 acaactccataatcaattttggtccctctagaagcggaatcaaacataca 18851274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 117423 - 117506
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||| ||||| |||||||||| ||| |||||||||||||||||| |||||  ||||| |||||||  ||||||||||||    
T  117423 gaattgattatgtaatattgattctgactagaagtgagttgaaggtaaaatgattcatgtttggatacatctatgtaaaagtga 117506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 215 - 365
Target Start/End: Original strand, 22226279 - 22226429
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||| ||||||||||||||||| |||  |||||||||| || || |   | |||||||||||| || || | | ||||||||||||||| ||||||||||    
T  22226279 tctaaaatcaaaagctacaaatactatcttcaagtagaatcaatcaacaaaacaaaatcaattttagtcgacaacaaccaaacatgtcagaatcaattct 22226378  T
Q  315 acacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||| || | ||  |||| | |||  || |||||||||| |||||||||||    
T  22226379 acacgtccaaaatcaattatagttcgtctaaaagtggaatcaaacatacac 22226429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 217 - 322
Target Start/End: Original strand, 42439662 - 42439768
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagt-agagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattcta 315  Q
    |||| |||||||||||| || |||| ||||||| ||| || ||| | |||  ||||||||||||| ||| |||||||||||  |||||||||||||| ||    
T  42439662 tagactcaaaagctacagattctagcttcaagttagaatcaattctggaggaaaaatcaattctagtcacaagcaaccaaatgtgtcaaaatcaatttta 42439761  T
Q  316 cacctct 322  Q
    |||||||    
T  42439762 cacctct 42439768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 10860405 - 10860497
Alignment:
Q  223 caaaagctacaaatcctagtttcaagt-agagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||||||||| |||| ||||||| ||| ||  || |||| |||||||||||| || |||| |  |||||||||||||||||||||||||    
T  10860405 caaaagctacaaattctagcttcaagtcagaatcacttctagacacaaaatcaattatattcaataaaaaccaaacatgtcaaaatcaattct 10860497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 14671182 - 14671095
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatttgt 213  Q
    ||||| ||||||| ||||||||| || |||||||||| ||||| || |||| |||| ||||| ||| ||||||||||||||||| ||||    
T  14671182 gaattgattttgtgaaattgattatggctaaaagtgaattgaatgtgaagt-atttatgtttggatgcattcatgtaaaagtgagttgt 14671095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 9818776 - 9818717
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatca 274  Q
    ||||||||||||||||||||||| ||| |||||||||| || ||||| ||| ||||||||    
T  9818776 tctagaatcaaaagctacaaatcatagcttcaagtagaatcaattatggaggcaaaatca 9818717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 10859942 - 10860013
Alignment:
Q  293 caaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    |||||| |||||||||| ||||||||||||| ||  |||||||  |  ||||||||||||||||||||||||    
T  10859942 caaacaggtcaaaatcatttctacacctctataatgaattttgcctcttccaaaagtggaaccaaacataca 10860013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 220 - 319
Target Start/End: Complemental strand, 11648119 - 11648020
Alignment:
Q  220 aatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacc 319  Q
    ||||||||  |||||||| ||| |||||||||| || ||| || |  || ||| |||||||||| | ||||| |||||||||||||||||||| ||||||    
T  11648119 aatcaaaatgtacaaatcttagcttcaagtagaatcaattttaaatgcataataaattctactcgacagcaatcaaacatgtcaaaatcaattatacacc 11648020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 27374221 - 27374304
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||| |||||||||||||| | |||||||| |||| || ||||||||||||||| ||  |||| |||||||||| ||||    
T  27374221 gaattgattctgtaaaattgattccgactaaaagtaagttaaaagtaaagtgatttgtgattgaatactttcatgtaaatgtga 27374304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 362
Target Start/End: Complemental strand, 28973828 - 28973753
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    |||| |||||||| |||||||||||||||||| |||||||  ||||| || | |||||||| | ||||||||||||    
T  28973828 agcatccaaacatatcaaaatcaattctacacatctagaatcaatttaggctcctccaaaactagaaccaaacata 28973753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 10161822 - 10161720
Alignment:
Q  261 tagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaaca 360  Q
    ||||| |||| ||||||||| || | | ||| |||||||||||| ||||||||||||| |||||||  ||||||  || | |  ||||||||||||||||    
T  10161822 tagaggcaaagtcaattctattcgagaacaatcaaacatgtcaagatcaattctacacatctagaatcaattttacttccccagaaagtggaaccaaaca 10161723  T
Q  361 tac 363  Q
    |||    
T  10161722 tac 10161720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 359
Target Start/End: Original strand, 13224704 - 13224805
Alignment:
Q  257 attatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaacca 356  Q
    |||||||| |||||||||||| |||||  || || ||||||||||||||||||||| |||| ||||||||  ||||||   |||| |||||||| ||| |    
T  13224704 attatagaaacaaaatcaattatactcggaa-catccaaacatgtcaaaatcaattatacatctctagaatcaattttacctacttcaaaagtgaaacta 13224802  T
Q  357 aac 359  Q
    |||    
T  13224803 aac 13224805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 43012727 - 43012677
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||| ||||    
T  43012727 caaaatcaattctactctaaatcaaacaaacatgtcaaaatcaattttaca 43012677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 7667982 - 7668035
Alignment:
Q  272 tcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctaga 325  Q
    |||||||||||||| |||||||||| |||||  ||| |||||||||||||||||    
T  7667982 tcaattctactcaagagcaaccaaagatgtctgaattaattctacacctctaga 7668035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 29923058 - 29922985
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcat 198  Q
    ||||| ||| ||||||||||||| || ||| |||||||||||| || |||| |||| ||||| |||||||||||    
T  29923058 gaattgattatgtaaaattgattttgactataagtgagttgaatgtgaagtaatttatgtttggatacattcat 29922985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 2868348 - 2868404
Alignment:
Q  124 agaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgattt 180  Q
    ||||||||||||||| |||||||| |   ||||||||||||||| ||||||||||||    
T  2868348 agaattaattttgtagaattgattttagttaaaagtgagttgaatgtaaagtgattt 2868404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 365
Target Start/End: Complemental strand, 5468797 - 5468666
Alignment:
Q  233 aaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataatt 332  Q
    |||||||||| ||||||||| || | ||| ||| || |||||||| || || | | ||| ||||||||||| |||||| |||||||||||||||  ||||    
T  5468797 aaatcctagtctcaagtagaatcaaatatggaggcagaatcaattataatcgacaacaatcaaacatgtcataatcaa-tctacacctctagaatcaatt 5468699  T
Q  333 ttggttactccaaaagtggaaccaaacatacac 365  Q
     ||    ||  ||||||||||||||||||||||    
T  5468698 atgacccctttaaaagtggaaccaaacatacac 5468666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 25548505 - 25548457
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacac 318  Q
    |||||||| |||| |||||||| ||||||||||| ||||||||||||||    
T  25548505 aatcaattttacttaaaagcaatcaaacatgtcataatcaattctacac 25548457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 316
Target Start/End: Complemental strand, 31906296 - 31906200
Alignment:
Q  220 aatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    ||||||||| |||||||| ||| |||||||| | || |||||||||  |||| |||||  || |||||  || ||||||||||| ||||||||||||    
T  31906296 aatcaaaagttacaaatcatagcttcaagtaaaatcaattatagaggtaaaaacaattaaacccaaaaataatcaaacatgtcataatcaattctac 31906200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 1105429 - 1105370
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    ||||||||||||||||  | | || ||||| ||||||||||||||| |||||||||||||    
T  1105429 caaaatcaattctacttgagaacagccaaaaatgtcaaaatcaattatacacctctagaa 1105370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 38845644 - 38845703
Alignment:
Q  305 aatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||||||||||||||||| ||||  |||||||||  ||| | |||||||||||||||||||    
T  38845644 aatcaattctacacctccagaatcaattttggtctctctagaagtggaaccaaacataca 38845703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 7035070 - 7035140
Alignment:
Q  138 aaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||| ||||||  ||||| |||||| || ||||| ||||||||||||||| | ||| ||||||||||||    
T  7035070 aaaattaattctgattaaaattgagttaaaagtaaaatgatttgtgtttagaaaaatttatgtaaaagtga 7035140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 34454058 - 34454116
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcat 198  Q
    ||||||||||| ||||||||||||||  |||  | |||||||||||||||| |||||||    
T  34454058 aattgattctgactaaaagtgagttgcgggtggattgatttgtgtttagattcattcat 34454116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 365
Target Start/End: Complemental strand, 36639979 - 36639830
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||| | ||||||||| | | || |||||||||| || ||| | ||| ||||||||||||||||| |    |||||||||||| ||| | | ||||    
T  36639979 tctagaattagaagctacaatttccagcttcaagtagaatctattttggaggcaaaatcaattctactctaggtgaaccaaacatgtaaaatttagttct 36639880  T
Q  315 acacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||| ||||   |||||||| | || | |||||| ||||||||||||||    
T  36639879 acacctttagagtcaattttggctcct-ctaaagtgaaaccaaacatacac 36639830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 4306636 - 4306591
Alignment:
Q  159 tgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    ||||||||| ||||| |||||| ||||| |||||||||||||||||    
T  4306636 tgagttgaatgtaaaatgatttatgtttggatacattcatgtaaaa 4306591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 11911903 - 11911972
Alignment:
Q  266 acaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttg 335  Q
    |||||||||||||||||  ||  |||| ||||| ||||||||||||| |||| ||||||||  |||||||    
T  11911903 acaaaatcaattctactttaacacaactaaacaagtcaaaatcaattttacatctctagaatcaattttg 11911972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 15955447 - 15955484
Alignment:
Q  276 ttctactcaaaagcaaccaaacatgtcaaaatcaattc 313  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  15955447 ttctactaaaaagcaaccaaacatgtcagaatcaattc 15955484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 22811127 - 22811070
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattca 197  Q
    |||||||| ||  ||||||||||||||| |||||||||||| ||||| ||||| ||||    
T  22811127 aattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttca 22811070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 37877206 - 37877133
Alignment:
Q  135 tgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||| ||||||  || ||||| ||||||||||| |||| ||| ||||| ||| ||||||| |||||||||    
T  37877206 tgtaaaatcgattctcgctgaaagtcagttgaaggtagagtggtttatgtttggattcattcatataaaagtga 37877133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 370808 - 370864
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    ||||||||||||| |||| ||||||||||| ||| |||||||| |||| ||| ||||    
T  370808 aatcaattctacttaaaaacaaccaaacatatcataatcaattttacatctcgagaa 370864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 316
Target Start/End: Complemental strand, 6949671 - 6949623
Alignment:
Q  268 aaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    |||||||||||||||||||| ||||||||  ||||| ||| ||||||||    
T  6949671 aaaatcaattctactcaaaaacaaccaaagttgtcagaattaattctac 6949623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 6951259 - 6951315
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||| ||| ||||| ||| |||| ||| |||| ||||||||||||||||    
T  6951259 ctaaaagtgagtcgaaagtaaaatgacttgtatttggataaattcatgtaaaagtga 6951315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 10859769 - 10859825
Alignment:
Q  136 gtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatac 192  Q
    |||||||||||| |  |||||||| ||||||| | |||||||||| |||||||||||    
T  10859769 gtaaaattgattataactaaaagtaagttgaatgcaaagtgatttatgtttagatac 10859825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 15368615 - 15368548
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||| || ||| ||||||||||| || ||||||| |||||  |||||| |||||||||||||    
T  15368615 aattgattctggctgaaattgagttgaagggaa-gtgatttatgtttgaatacatccatgtaaaagtga 15368548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 357
Target Start/End: Complemental strand, 16016963 - 16016879
Alignment:
Q  273 caattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaa 357  Q
    ||||||||||  | ||||| |||||  ||||||||||||| |||||||||||||  || ||||| | ||  ||||||||||||||    
T  16016963 caattctactagagagcaatcaaaccagtcaaaatcaattatacacctctagaataaagtttggcttctttaaaagtggaaccaa 16016879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 16293997 - 16294033
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctcta 323  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  16293997 agcaaccaaacatgttaaaatcaattctacacttcta 16294033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 18637426 - 18637370
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattc 196  Q
    ||||||||||  |||||||||||||||  ||| |||||||||||||| |||| ||||    
T  18637426 aattgattctaactaaaagtgagttgagagtacagtgatttgtgtttggatagattc 18637370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 27374349 - 27374433
Alignment:
Q  230 tacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    |||||||||||  |||||||||| || ||| |  || |||||| |||||||||  ||| ||||||||||||||| || |||||||    
T  27374349 tacaaatcctaacttcaagtagaatcaattcttaaggcaaaattaattctacttgaaaacaaccaaacatgtcagaaacaattct 27374433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 29184357 - 29184413
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||| ||||| ||||||||||||   ||| ||||||||||||| |||||||    
T  29184357 ctaaaagtgatttgaatgtaaagtgatttacctttggatacattcatgtgaaagtga 29184413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 365
Target Start/End: Complemental strand, 32980534 - 32980437
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtgg-aaccaaacatacac 365  Q
    |||||||| ||||||| |||| |||| |||||||| |||||||||| || ||||  ||||  |||||||| |  |||||||| || ||||||||||||||    
T  32980534 caaaatcacttctactaaaaaacaacaaaacatgttaaaatcaattttatacct--agaatcaattttggcttgtccaaaagcgggaaccaaacatacac 32980437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 36927629 - 36927697
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||| || ||   ||| ||| ||||||||||||| ||||| ||||||||| |||||||||||    
T  36927629 aattgattctgactgaattagagatgatggtaaagtgatttatgtttggatacattcctgtaaaagtga 36927697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 326
Target Start/End: Complemental strand, 39514862 - 39514830
Alignment:
Q  294 aaacatgtcaaaatcaattctacacctctagaa 326  Q
    ||||| |||||||||||||||||||||||||||    
T  39514862 aaacaagtcaaaatcaattctacacctctagaa 39514830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 7629829 - 7629754
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||| |||||||||||||||||||||||||  ||| |||| | ||||||||||||||||||||||||||    
T  7629829 aaccaaacatgacaaaatcaattctacacctctagaatcaatcttggctcctccaaaagtggaaccaaacatacac 7629754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 15928519 - 15928588
Alignment:
Q  257 attatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    |||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  15928519 attatagagatataatcaattctactcaacaacaaccaaacatgtcaaaatcaattctacacctccagaa 15928588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 6327114 - 6327257
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    ||||||||||| ||||||||  |||||||||||||| || ||| |||| ||| |||||||| || |||| | |||||||||||||||      ||||||     
T  6327114 tagaatcaaaaactacaaattttagtttcaagtagaatcaattctagaaacataatcaattttaatcaacaacaaccaaacatgtca-----gattctaa 6327208  T
Q  317 acctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||  ||||||| || ||| ||||||| ||||||||||||||    
T  6327209 acctctagaatcaattttgttttctctaaaagtgaaaccaaacatacac 6327257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 321
Target Start/End: Complemental strand, 42741019 - 42740913
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattct 314  Q
    ||||||||||||||||||||||| ||| |||||||||| || ||||| |||  ||| ||| | ||| || ||||| ||  ||||||||||||||||||||    
T  42741019 tctagaatcaaaagctacaaatcttagcttcaagtagaatcaattatggaggaaaattcagtcctattcgaaagctacggaacatgtcaaaatcaattct 42740920  T
Q  315 acacctc 321  Q
    |||||||    
T  42740919 acacctc 42740913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 217 - 326
Target Start/End: Original strand, 2002740 - 2002849
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    |||||| |||| ||||||||||||| |||||||||| ||   | | ||| ||||||||||||||||  |||||||||||  ||||||| |||||||||||    
T  2002740 tagaatgaaaaactacaaatcctagcttcaagtagaatcaggtctggaggcaaaatcaattctactagaaagcaaccaagtatgtcaacatcaattctac 2002839  T
Q  317 acctctagaa 326  Q
     |||||||||    
T  2002840 tcctctagaa 2002849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 15220794 - 15220871
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||| ||||||| || | |||||||||||||| |||||||||||| ||||| ||||||||||||| |||||||    
T  15220794 attttgtaatattgattatgacgaaaagtgagttgaatgtaaagtgatttatgtttggatacattcatgttaaagtga 15220871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 4894099 - 4894167
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||  |||||| | |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  4894099 aattgattctagctaaaattaagttgaaggtaaagtgatttatgtttagatacattcatttaaaagtga 4894167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 16518909 - 16518853
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||    
T  16518909 ctaaaagtgagttgagggtaaaatgatttgtgtttggatacattcatgtaaaagtga 16518853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 37420263 - 37420351
Alignment:
Q  238 ctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    |||| ||| |||||| || ||| ||||| ||||||||||||||||| |  | | |||||||||||||||||||||||||||||||||||    
T  37420263 ctagattctagtagaatcaattctagaggcaaaatcaattctactctagggaagccaaacatgtcaaaatcaattctacacctctagaa 37420351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 680218 - 680300
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||| |||||| |||| ||||||||||  |||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  680218 gaattgattatgtaaagttgagtctgtctaaat-tgagttgaaggtaaagtgttttgtgtttgcatacattcatgtaaaagtga 680300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 1976931 - 1977046
Alignment:
Q  238 ctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggt 337  Q
    |||||||  |||||| || ||| | ||||||||||||||||||||   ||| || ||||||||||||||||||||  | ||||||||||  ||||||||     
T  1976931 ctagtttatagtagaatcaattttggagacaaaatcaattctacttttaagaaagcaaacatgtcaaaatcaatttcaaacctctagaatcaattttggc 1977030  T
Q  338 tactccaaaagtggaa 353  Q
    | ||||||||||||||    
T  1977031 tcctccaaaagtggaa 1977046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 287 - 362
Target Start/End: Complemental strand, 9943393 - 9943318
Alignment:
Q  287 agcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||||||||| |||||||||| |||||||  ||||  |||||||||| ||||||| |||||||||||||||    
T  9943393 agcaaccaaacatgttaaaatcaattttacaccttcagaatcaattttggttgctccaaatgtggaaccaaacata 9943318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 42982521 - 42982446
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    |||||||||||||||||||| |||||||  | ||||| |||||| | || ||||||||||||||||||||||||||    
T  42982521 aaccaaacatgtcaaaatcagttctacatgtttagaattaatttggattcctccaaaagtggaaccaaacatacac 42982446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 246 - 356
Target Start/End: Original strand, 16013785 - 16013895
Alignment:
Q  246 aagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaa 345  Q
    |||||||||| ||||| ||| |  ||||||||||||   | || ||| |||||||| ||||||||||||||||||||||||  |||||||| | ||||||    
T  16013785 aagtagagtcaattatggaggcttaatcaattctacaatagagaaacgaaacatgttaaaatcaattctacacctctagaataaattttggctcctccaa 16013884  T
Q  346 aagtggaacca 356  Q
    |||| ||||||    
T  16013885 aagtagaacca 16013895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 40582716 - 40582650
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaacca 356  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||| |  ||||||||||||||||    
T  40582716 aaccaaacatgttaaaatcaattctacacctctagaatcaattttggctcttccaaaagtggaacca 40582650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 365
Target Start/End: Original strand, 3476525 - 3476625
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgt--caaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||||||||||| ||||| | |||||| |||||| |  |||||||||||||||||||||||||  ||| | || |  ||||||||||||||||||||||||    
T  3476525 caaaatcaattttactcgagagcaacgaaacatatatcaaaatcaattctacacctctagaataaatatcggctcttccaaaagtggaaccaaacataca 3476624  T
Q  365 c 365  Q
    |    
T  3476625 c 3476625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 1976806 - 1976874
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||| ||| || |||||||||||||||| || || ||||| |||||||||||||||||||||    
T  1976806 aattgattctggctagaattgagttgaaggtaaagcgacttatgtttggatacattcatgtaaaagtga 1976874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 11759786 - 11759873
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatttg 212  Q
    ||||| ||||||||||||||||| ||  ||||||||||||||||||||| || |||||||||  ||||| | ||||||  ||||||||    
T  11759786 gaattgattttgtaaaattgattttgattaaaagtgagttgaaggtaaattggtttgtgtttgtatacacttatgtaagcgtgatttg 11759873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 320
Target Start/End: Complemental strand, 12037101 - 12036998
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    ||||||||||||||||||||  ||||||||| |||| || ||| |||| ||| || ||||||||| | | | ||||||||||||| | ||||| ||||||    
T  12037101 tagaatcaaaagctacaaattttagtttcaactagaatcaattctagacacataaccaattctacacgacaacaaccaaacatgttagaatcagttctac 12037002  T
Q  317 acct 320  Q
    ||||    
T  12037001 acct 12036998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 243 - 358
Target Start/End: Original strand, 680348 - 680469
Alignment:
Q  243 ttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaa------ttctacacctctagaaataattttgg 336  Q
    |||||||||| || ||| | ||| |||||||| ||||| || |||||||| |||||||||||||| ||      ||||||||||||||||  |||||| |    
T  680348 ttcaagtagaatcaattctggaggcaaaatcagttctattcgaaagcaactaaacatgtcaaaataaaataaaattctacacctctagaatcaattttag 680447  T
Q  337 ttactccaaaagtggaaccaaa 358  Q
     | |||||||||||||||||||    
T  680448 ctcctccaaaagtggaaccaaa 680469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 3853996 - 3853926
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtgatt 210  Q
    |||||||| ||  ||||||||||||||| ||||| |||||| ||||| ||||||||||||||||| |||||    
T  3853996 aattgattttgattaaaagtgagttgaatgtaaattgatttatgtttggatacattcatgtaaaattgatt 3853926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 31453422 - 31453340
Alignment:
Q  218 agaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatg 300  Q
    |||||||||||  ||||||  ||| |||||||||| || ||||||||| |||||| |||||||||||| | ||||||||||||    
T  31453422 agaatcaaaaggaacaaattttagcttcaagtagaatcaattatagaggcaaaataaattctactcaacatcaaccaaacatg 31453340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 36987207 - 36987257
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  36987207 caaaatcaattatactcaaaagaatccaaacatgtcaaaatcaattctaca 36987257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 7630406 - 7630361
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  7630406 caaaatcaattctacttgaaagcaaccaaacatgtcaaaatcaatt 7630361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 16518816 - 16518715
Alignment:
Q  220 aatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacc 319  Q
    |||||||||||||||||||||  ||| |||||| || ||| | ||  ||||| ||||||   | |||||||||||||||| ||| |||||||||||||||    
T  16518816 aatcaaaagctacaaatcctatcttctagtagaatcaattctggaagcaaaaccaattcatttgaaaagcaaccaaacatatcagaatcaattctacacc 16518717  T
Q  320 tc 321  Q
    ||    
T  16518716 tc 16518715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 37561742 - 37561638
Alignment:
Q  222 tcaaaagctacaaatcctagtttcaagt-agagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacct 320  Q
    ||||||| |||||||| ||||||||||| ||| || ||||||||| ||||||||| ||||||  |  | |  |||||||||||||||||||| |||||||    
T  37561742 tcaaaaggtacaaatcgtagtttcaagttagaatcaattatagaggcaaaatcaaatctacttgag-gaattcaaacatgtcaaaatcaattttacacct 37561644  T
Q  321 ctagaa 326  Q
    ||||||    
T  37561643 ctagaa 37561638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 16519400 - 16519348
Alignment:
Q  303 aaaatcaattctacacctctagaaataattttggttactccaaaagtggaacc 355  Q
    ||||||||||||||||||||||||  ||||||| || ||||||||||||||||    
T  16519400 aaaatcaattctacacctctagaatcaattttgcttcctccaaaagtggaacc 16519348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 1763330 - 1763259
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattca 197  Q
    |||| ||||||||||||||||| ||  ||||| |||||||||  ||||||||||| ||||||||||| ||||    
T  1763330 aattgattttgtaaaattgattttggttaaaattgagttgaatttaaagtgatttatgtttagataccttca 1763259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 6767827 - 6767756
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaa 202  Q
    ||||||||||||||||| ||  ||||| ||||||||| ||||||||||||  ||||| |||||| |||||||    
T  6767827 attttgtaaaattgattgtgattaaaaatgagttgaatgtaaagtgatttacgtttatatacatccatgtaa 6767756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 10618877 - 10618956
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    ||||| |||||||||||||||||||  |||||| ||| ||||||||||||||| || |||||  ||||||| || |||||    
T  10618877 gaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 10618956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 43501130 - 43501083
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctaca 317  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||    
T  43501130 aatcaattctacttgaaagcaaccaaacatgtcagaatcaattctaca 43501083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 362
Target Start/End: Complemental strand, 7630200 - 7630055
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttca-agtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattcta 315  Q
    ||||||||| ||||| || | |||| |||| | |||| || ||||| ||| ||||| ||||||||||| | || || |||| ||||||||||||||| ||    
T  7630200 tagaatcaatagctaaaatttctagattcacattagaatcaattatggaggcaaaaccaattctactctagaggaatcaaa-atgtcaaaatcaatttta 7630102  T
Q  316 cacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    |||||| ||||  | |||||| | ||||||  |||||||||||||||    
T  7630101 cacctccagaatcagttttggatgctccaatcgtggaaccaaacata 7630055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 195
Target Start/End: Original strand, 42774784 - 42774853
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacatt 195  Q
    ||||| |||||||||||||||||||| |||||| | ||||||||||||| || ||| ||||| ||||||||    
T  42774784 gaattgattttgtaaaattgattctgactaaaaataagttgaaggtaaaatggtttatgttt-gatacatt 42774853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 44412228 - 44412151
Alignment:
Q  130 aattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||| ||||| ||||||| ||| |||| |||||||||| ||||| |||||| || |||||| |||||||||||||||||    
T  44412228 aattatgtaagattgattttgtgtaaa-gtgagttgaacgtaaaatgatttatgcttagatccattcatgtaaaagtga 44412151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 33502944 - 33502997
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacct 320  Q
    |||||||| || ||||| | |||||||||||||||||||||||||| |||||||    
T  33502944 caaaatcagttttactcgagagcaaccaaacatgtcaaaatcaattttacacct 33502997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 43501167 - 43501130
Alignment:
Q  215 tctagaatcaaaagctacaaatcctagtttcaagtaga 252  Q
    |||| |||||||||||||||||||||||||||||||||    
T  43501167 tctaaaatcaaaagctacaaatcctagtttcaagtaga 43501130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 44148563 - 44148518
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaatt 312  Q
    ||||||||||| || |||| ||||||||||||||||||||||||||    
T  44148563 caaaatcaattatagtcaagagcaaccaaacatgtcaaaatcaatt 44148518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 4908942 - 4908866
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    ||||| ||||||| | ||||  ||||||||||||  | |||||||||||| ||||| ||||||||||||| ||||||    
T  4908942 attttctaaaatttagtctgaataaaagtgagtttcatgtaaagtgatttatgtttggatacattcatgttaaagtg 4908866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 12110986 - 12110918
Alignment:
Q  124 agaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatac 192  Q
    |||||| ||||||| ||||||||| ||  |||||||||||||||  ||||||||||| ||||| |||||    
T  12110986 agaattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttatgtttggatac 12110918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 37649595 - 37649659
Alignment:
Q  293 caaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaa 357  Q
    ||||||||||||||||||||| | ||||| ||||  |||||||  | ||||||||||||||||||    
T  37649595 caaacatgtcaaaatcaattccatacctcaagaatcaattttgactcctccaaaagtggaaccaa 37649659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 43717307 - 43717235
Alignment:
Q  292 ccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacataca 364  Q
    ||||||||||||||||||||||||||| |||||||  ||||||     ||||||||||| |||||||| ||||    
T  43717307 ccaaacatgtcaaaatcaattctacacatctagaatcaattttaacacctccaaaagtgaaaccaaacgtaca 43717235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 320
Target Start/End: Complemental strand, 3352116 - 3352013
Alignment:
Q  217 tagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    |||||||||||||| ||| ||| |  |||||||| | || |||||  |||||| |||| |||||||||| | |||| ||| |||||| |||||||| |||    
T  3352116 tagaatcaaaagctgcaattcccaacttcaagtaaaatcaattatgaagacaagatcatttctactcaacaacaacaaaaaatgtcagaatcaattatac 3352017  T
Q  317 acct 320  Q
    ||||    
T  3352016 acct 3352013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 4119368 - 4119431
Alignment:
Q  139 aaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaa 202  Q
    |||||||||||  ||||||||||||  || |||||||||||| |||||  ||||||||||||||    
T  4119368 aaattgattctagctaaaagtgagtctaatgtaaagtgatttatgtttgaatacattcatgtaa 4119431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 4779265 - 4779183
Alignment:
Q  125 gaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||| ||||| ||||||| |||| |||||||| ||||||||  |||||||||||| | ||||||||  |||||||||| ||||    
T  4779265 gaattgattttttaaaatttattccgtctaaaa-tgagttgagcgtaaagtgatttatatttagatatgttcatgtaaatgtga 4779183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 7632536 - 7632591
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacatt 195  Q
    |||| ||||||  ||||||||| |||||||||||||||| ||||||| ||||||||    
T  7632536 aatttattctgattaaaagtgaattgaaggtaaagtgatatgtgtttggatacatt 7632591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 16488336 - 16488277
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    ||||||||||||||| | | ||||||||| ||||||| |||||||  |||||||||||||    
T  16488336 caaaatcaattctacacgagagcaaccaaccatgtcagaatcaatcatacacctctagaa 16488277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 30503247 - 30503148
Alignment:
Q  219 gaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacac 318  Q
    |||||||||||||| |||||| | |||||||||| || ||| | ||| |||||||| |||| ||  ||| ||| | ||||||| | ||||||||||||||    
T  30503247 gaatcaaaagctacgaatcctggcttcaagtagaatcaattttggaggcaaaatcatttcttcttgaaatcaatcgaacatgttagaatcaattctacac 30503148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 30503350 - 30503299
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagata 191  Q
    ||||||||||| |||||||| ||||||||||||| |||||| ||||| ||||    
T  30503350 aattgattctgactaaaagttagttgaaggtaaactgatttttgtttggata 30503299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 33502365 - 33502322
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacatt 195  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||    
T  33502365 ctaaaagtaagttgaatgtaaagtgatttgtgtttggatacatt 33502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 326
Target Start/End: Original strand, 42906966 - 42907025
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaa 326  Q
    ||||| ||||||||||| | |||||||||||||| |||||| | || |||||||||||||    
T  42906966 caaaaccaattctactcgagagcaaccaaacatgacaaaattagttatacacctctagaa 42907025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 3654724 - 3654786
Alignment:
Q  303 aaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||||||||  ||||||  |||| ||  | ||||||||||||||||||||||||||    
T  3654724 aaaatcaattctacactgctagaatcaattatgcctcctccaaaagtggaaccaaacatacac 3654786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 7649352 - 7649298
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    |||||||||||||| |||||||||||||| | ||| |||| ||| ||||||||||    
T  7649352 ctaaaagtgagttggaggtaaagtgatttatttttggataaatttatgtaaaagt 7649298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 316
Target Start/End: Complemental strand, 11510988 - 11510894
Alignment:
Q  223 caaaagctacaaatcctagtttcaag-tagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctac 316  Q
    ||||| || ||||| |||| |||||| |||| || | ||| ||| ||||||||||||||||| ||| || |||||||| |||||| |||||||||    
T  11510988 caaaaactccaaattctagcttcaagatagaatcaaatatggaggcaaaatcaattctactcgaaaacatccaaacatatcaaaaccaattctac 11510894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 16519589 - 16519523
Alignment:
Q  138 aaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 204  Q
    ||||||||||||| ||| |||||| ||||| |||||||||||| | ||  |||||||||||| ||||    
T  16519589 aaaattgattctggctagaagtgaattgaaagtaaagtgatttatattctgatacattcatgcaaaa 16519523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 362
Target Start/End: Original strand, 37745995 - 37746069
Alignment:
Q  288 gcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||| ||| |||||||||| ||||||||||||||| ||  | |||||| | ||||||| |||||| ||||||||    
T  37745995 gcaacaaaaaatgtcaaaattaattctacacctctacaatcagttttggcttctccaaatgtggaatcaaacata 37746069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 40401597 - 40401651
Alignment:
Q  152 ctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    |||||| ||||||||||||| | | |||| ||||| |||||||||||||||||||    
T  40401597 ctaaaaatgagttgaaggtagactaatttatgtttggatacattcatgtaaaagt 40401651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 42774958 - 42775028
Alignment:
Q  295 aacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacatacac 365  Q
    ||||||||||||||||||||| ||||||||||  |||||||| ||| | | ||||  ||||| ||||||||    
T  42774958 aacatgtcaaaatcaattctatacctctagaatcaattttggctaccctagaagttaaaccacacatacac 42775028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 11504035 - 11504072
Alignment:
Q  171 aaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  11504035 aaagtgatttgtgttttaatacattcatgtaaaagtga 11504072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 23359942 - 23359999
Alignment:
Q  140 aattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattca 197  Q
    |||||||| ||  ||||||||||||||| |||||||||||| ||||| ||||| ||||    
T  23359942 aattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttca 23359999  T

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Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 28206807 - 28206754
Alignment:
Q  153 taaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagt 206  Q
    |||| |||||||||| ||||| | |||| ||||||| |||||||||||||||||    
T  28206807 taaatgtgagttgaatgtaaattaatttatgtttaggtacattcatgtaaaagt 28206754  T

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Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 33019129 - 33019166
Alignment:
Q  171 aaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  33019129 aaagtgatttgtgtttggatgcattcatgtaaaagtga 33019166  T

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Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 33047555 - 33047592
Alignment:
Q  171 aaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  33047555 aaagtgatttgtgtttggatacatttatgtaaaagtga 33047592  T

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Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 336
Target Start/End: Original strand, 44670989 - 44671058
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttgg 336  Q
    ||||||||||||||||  | | ||| |||||||| ||||| ||||||||| |||||||||  ||||||||    
T  44670989 caaaatcaattctactttagaacaatcaaacatgccaaaagcaattctacccctctagaatcaattttgg 44671058  T

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Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 4007136 - 4007211
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    ||||||||||||||||| ||  ||||||||||||||| | ||||| |||| ||||| |||  ||| |||||||||||    
T  4007136 attttgtaaaattgattatggataaaagtgagttgaatgaaaagtaatttatgttt-gatgtatttatgtaaaagtg 4007211  T

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Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 10280731 - 10280683
Alignment:
Q  263 gagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaat 311  Q
    |||||| ||||||||||| |||||| |||| |||||||||| |||||||    
T  10280731 gagacataatcaattctattcaaaaacaacaaaacatgtcataatcaat 10280683  T

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Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 362
Target Start/End: Original strand, 33047650 - 33047742
Alignment:
Q  270 aatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||||||||   ||||| ||||||||| | ||||||||||||||||| | ||  |||||||||  ||| | ||| | |||||||||||    
T  33047650 aatcaattctactcgtcagcaatcaaacatgtgagaatcaattctacacctccaaaatcaattttggtccctctagaagcgaaaccaaacata 33047742  T

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Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 36893413 - 36893497
Alignment:
Q  123 aagaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtg 207  Q
    ||||||| |||||||| ||| |||  |  |||||| ||| ||||| ||||| |||||||||||||| ||||||| | ||||||||    
T  36893413 aagaattgattttgtagaatcgatattaactaaaaatgaattgaaagtaaaatgatttgtgtttagttacattcgtataaaagtg 36893497  T

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Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 43969862 - 43969802
Alignment:
Q  126 aattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgttt 186  Q
    |||| |||||||||| |||||||||  ||||||||||||||| || ||||| ||| |||||    
T  43969862 aattgattttgtaaagttgattctgaataaaagtgagttgaaagtgaagtgctttatgttt 43969802  T

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Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 44148694 - 44148654
Alignment:
Q  163 ttgaaggtaaagtgatttgtgtttagatacattcatgtaaa 203  Q
    ||||||||||||||||||||||||  ||||||| |||||||    
T  44148694 ttgaaggtaaagtgatttgtgtttgaatacatttatgtaaa 44148654  T

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Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 44439219 - 44439171
Alignment:
Q  288 gcaaccaaacatgtcaaaatcaattctacacctctagaaataattttgg 336  Q
    |||||||||||||||||||| ||||| |||||| |||||  ||||||||    
T  44439219 gcaaccaaacatgtcaaaattaattcaacacctttagaatcaattttgg 44439171  T

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Target: scaffold0361 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 14047 - 14124
Alignment:
Q  131 attttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaagtga 208  Q
    |||||||||||||||||||  ||| || |||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  14047 attttgtaaaattgattcttgctacaattgagttgaaggtaaagtgatttatgtttggatacattcatgtgaaagtga 14124  T

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Target: scaffold0361; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 365
Target Start/End: Original strand, 14179 - 14306
Alignment:
Q  238 ctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattctacacctctagaaataattttggt 337  Q
    |||| |||||||||| || ||| | | ||||||||||||||||||  ||   || | ||||  |||||||||||||||||| ||||||   ||||||||     
T  14179 ctagcttcaagtagaatcaattcttgtgacaaaatcaattctactttaaccaaatccaacacttcaaaatcaattctacacatctagattcaattttggc 14278  T
Q  338 tactccaaaagtggaaccaaacatacac 365  Q
    |  |||||||||||||||||||||||||    
T  14279 tcttccaaaagtggaaccaaacatacac 14306  T

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Target: scaffold0314 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 290 - 361
Target Start/End: Complemental strand, 17393 - 17322
Alignment:
Q  290 aaccaaacatgtcaaaatcaattctacacctctagaaataattttggttactccaaaagtggaaccaaacat 361  Q
    ||||||| |||||| ||||||||||||||||| ||||  |||||||||||||| | ||||||||||||||||    
T  17393 aaccaaatatgtcataatcaattctacacctccagaatcaattttggttactctagaagtggaaccaaacat 17322  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 321
Target Start/End: Original strand, 23635 - 23742
Alignment:
Q  214 gtctagaatcaaaagctacaaatcctagtttcaagtagagtcgattatagagacaaaatcaattctactcaaaagcaaccaaacatgtcaaaatcaattc 313  Q
    ||||||| |||||||||||||||||||| ||||  |||| |   |||| |||||||||||||||| | || |  |||||||||||||||||||| || |     
T  23635 gtctagattcaaaagctacaaatcctagcttcagttagaattatttatggagacaaaatcaattccattcgagggcaaccaaacatgtcaaaataaactt 23734  T
Q  314 tacacctc 321  Q
    ||||||||    
T  23735 tacacctc 23742  T

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Target: scaffold0172 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 15255 - 15323
Alignment:
Q  124 agaattaattttgtaaaattgattctgtctaaaagtgagttgaaggtaaagtgatttgtgtttagatac 192  Q
    |||||| ||||||| ||||||||| ||  |||||||||||||||  ||||||||||| ||||| |||||    
T  15255 agaattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttatgtttggatac 15323  T

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Target: scaffold0393 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 362
Target Start/End: Original strand, 12402 - 12498
Alignment:
Q  267 caaaatcaattctactcaaaagcaaccaaacatgtcaaaatca-attctacacctctagaaataattttggttactccaaaagtggaaccaaacata 362  Q
    ||||||||||||||||  | | || |||||||||||||||| |  || ||||||| |||||| |||||||  | ||||||||||| || ||||||||    
T  12402 caaaatcaattctacttgagaacatccaaacatgtcaaaataattttttacacctttagaaacaattttgactcctccaaaagtgaaatcaaacata 12498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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