View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19453_high_26 (Length: 285)
Name: NF19453_high_26
Description: NF19453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19453_high_26 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 27 - 269
Target Start/End: Complemental strand, 5313833 - 5313596
Alignment:
| Q |
27 |
tcgctcgagcgttaagattggatgtcttaacagacgtcgtgattaaggtcggtgcatctgataaaataaaagcataagagctcataaatgtgttcttggt |
126 |
Q |
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| T |
5313833 |
tcgctcgagcgttaagattggatgtcttaacagacgtcgtgattaaggtcggtgcatctgataaaa-----gcataagagctcataaatgtgttcttggt |
5313739 |
T |
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| Q |
127 |
gcacagtcagcagttttagaacgcatgtttgtaatttctgagaagaaaaaggaacaaccaactactataaacataccagacatgtcatttgaagtttgtc |
226 |
Q |
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| T |
5313738 |
gcatggtcagcagttttagaacgcatgtttgtaatttctgagaagaaaaaggaacaaccaactactataaacatacctgacatgtcatttgaagtttgtc |
5313639 |
T |
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| Q |
227 |
aagcattaatcagttatctgtattgaagaagaatttagaaagt |
269 |
Q |
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| T |
5313638 |
aagcattaatcagttatctgtattgaagaagaatttagaaagt |
5313596 |
T |
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