View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19458_high_4 (Length: 213)
Name: NF19458_high_4
Description: NF19458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19458_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 45458791 - 45458613
Alignment:
| Q |
17 |
atatgaagctgataacactggtaaacaggcagaaagtatatatatttactcaagggaacaataaaattaataaatcttaggtatgaagttagttgtaaga |
116 |
Q |
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| T |
45458791 |
atatgaagctgataacactggtaaacaggcagaaagtatatatatttactcaagggaacaataaaattaataaatcttaggtatgaagttagttgtaaga |
45458692 |
T |
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| Q |
117 |
aaatgaaaatataaatgggagttgtgtataccacctgagagtgctggagtgaggactgcggccccaattgtcatacagg |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45458691 |
aaatgaaaatataaatgggagttgtgtataccacctgagagtgctggagtgaggactgcggccccaattgtcatacagg |
45458613 |
T |
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