View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19459_high_18 (Length: 330)
Name: NF19459_high_18
Description: NF19459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19459_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 29262607 - 29262920
Alignment:
| Q |
1 |
attccatattattatgaccattttcctaaaaatcgtaaaggttaagtacnnnnnnntatgctttcaattatgtatatatattgctacatcatttaacaaa |
100 |
Q |
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| T |
29262607 |
attccatattattatgaccattttcctaaaaatcgtaaaggttaagtacaaaaaaatatgctttcaattatgtatacatattgctacatcatttaacaaa |
29262706 |
T |
|
| Q |
101 |
tatatcaagttatgtatttttaaatttattgaatgttgtgacaacagtaaaacctataaactgttttaccatgatgttgcatacaaattaactatatttt |
200 |
Q |
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| T |
29262707 |
tatatcaagttatgtatttttaaatttattgaatgctgtgacaacagtaaaacctataaactgttttaccatgatgttgcatacaaattaactatatttt |
29262806 |
T |
|
| Q |
201 |
ttatttt--atattatctcatttactaatgattgtttccattacaggagtgtgattcaaatcagctcaagaacaatttgtcaggatctaatttagagtgt |
298 |
Q |
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| T |
29262807 |
ttttttttcatattatctcatttactaatgattgtttccattacaggagtgtgattcaaatcagctcaagaacaatttgtcaggatctaatttagagtgt |
29262906 |
T |
|
| Q |
299 |
aagaacccaagctt |
312 |
Q |
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|||||||||||||| |
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| T |
29262907 |
aagaacccaagctt |
29262920 |
T |
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