View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19459_high_9 (Length: 429)
Name: NF19459_high_9
Description: NF19459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19459_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 23 - 422
Target Start/End: Original strand, 41659757 - 41660154
Alignment:
| Q |
23 |
tacttgttgaagaaagatatgtcgatgtcagggatgtggggtgtccatggaccaattaaaaacccacctaaaagagcaaggatcccaattattcttccaa |
122 |
Q |
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| T |
41659757 |
tacttgttgaagaaagatatgttaatgt-agggatgtggggtgtccatggaccaattaaaaacccacctaaaagagcaaggatcccaattattcttccaa |
41659855 |
T |
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| Q |
123 |
cctttatagctgtatacccttaattttcttacatttattaaacactagctcattttctctctatttctctttctatcgtatatttcacatcattagtcgt |
222 |
Q |
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| T |
41659856 |
cctttatagctgtatacccttaattttcttacatttattaaacactagctcattttctctctatttctctttctatcgtatatttcacatcattagtcgt |
41659955 |
T |
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| Q |
223 |
taccactatttctatctctcttggtgtagaatggttaatgttacattattcttttcttgaaagcttaaaaattagttttaaacttaaaacatgaaggtaa |
322 |
Q |
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| T |
41659956 |
taccactatttctatctctcttggtgtagaatggttaatgttacattattcttttcttgaaagcttaaaaattagttttaaacttaaaacatgaaggtaa |
41660055 |
T |
|
| Q |
323 |
aaccatgcctgctattatttcagtttaacattatttccggattgatgttttgggttttagtttcccccaaatgagtcgtttatgttatgttatattcttc |
422 |
Q |
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| T |
41660056 |
aaccatgcctgctattatttcagtttaacattatttccggattgatgttttggg-tttagtttcccccaaatgagacgtttatgttatgttatattcttc |
41660154 |
T |
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