View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19459_low_10 (Length: 416)
Name: NF19459_low_10
Description: NF19459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19459_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 18 - 409
Target Start/End: Original strand, 38054998 - 38055389
Alignment:
| Q |
18 |
gttacctaagcaacccatgattcctctcccaaccgagtctactctaagatggccaatatgaggtactaactctttcttagtccatatggtgagaaaaatt |
117 |
Q |
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| T |
38054998 |
gttacctaagcaacccatgattcctctcccaacagagtctactctaagatggccaatatgaggtactaactctttcttagtccatatggtgagaaaaatt |
38055097 |
T |
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| Q |
118 |
ccaaccatttgtttacttgatacgagagagtatttagattgaccaggagaagctggtatttctgcaattgaaagcaattcttccatgctactttcaccgt |
217 |
Q |
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| T |
38055098 |
ccaaccatttgtttacttgatacgagagagtatttagattgaccaggagaagctggtatttctgcaattgaaagcaattcttccatgctactttcaccgt |
38055197 |
T |
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| Q |
218 |
gaatctcagaatctaacttattcataggatcactaaattttctaaccctacgtcgctctctagatggagattccacagggcaattgcaagccttaaggag |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38055198 |
gaatctcagaatctaacttattcataggatcactaaattttctaaccctacgtcgctctctagatggagattccacagggcaattgcaagccttaaggag |
38055297 |
T |
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| Q |
318 |
gctgctaccttctgccctgaaacttctacggacagctttaagagatggcttctgaaagaaatgtagacttgctggtgactttgattcctttg |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38055298 |
gctgctaccttctgccctgaaacttctacggacagctttaagagatggcttctgaaagaaatgtagacttgctggtgactttgattcctttg |
38055389 |
T |
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