View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19459_low_20 (Length: 287)
Name: NF19459_low_20
Description: NF19459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19459_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 36124378 - 36124596
Alignment:
| Q |
20 |
attacattgtctcaaatgtaaaagcaaaatcttgatagttgacaaaaaagctataactaaaacaacaaatgtctaacacacagattacttcagtcctttt |
119 |
Q |
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| T |
36124378 |
attacattgtctcaaatgtaaaagcaaaatcttgatagttgacaaaaaagctataactaaaacaacaaatgtctaacacacagattacttcagtcctttt |
36124477 |
T |
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| Q |
120 |
aatcgaataagctgaatcccatatcctgcacaaacaaagataacataacacaaacattagcttagccatgaatttaccaaataacaaacaacaaactata |
219 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36124478 |
aatcgaataagctgaatcccatatcctgc----acaaagataacataacacaaacattagcttagccatgaatttaccaaataacaaacaacaaactata |
36124573 |
T |
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| Q |
220 |
atcttgaaacttacatcatcgga |
242 |
Q |
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||||||||||||||||||||||| |
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| T |
36124574 |
atcttgaaacttacatcatcgga |
36124596 |
T |
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