View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1945_low_3_N (Length: 421)

Name: NF1945_low_3_N
Description: NF1945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1945_low_3_N
NF1945_low_3_N
[»] chr8 (61 HSPs)
chr8 (214-411)||(15849793-15849989)
chr8 (29-217)||(15847958-15848154)
chr8 (127-185)||(17564717-17564774)
chr8 (50-119)||(21304087-21304156)
chr8 (113-181)||(13439478-13439545)
chr8 (130-213)||(40791068-40791149)
chr8 (127-185)||(31740120-31740177)
chr8 (153-214)||(21303984-21304044)
chr8 (59-115)||(30353976-30354032)
chr8 (153-213)||(31846469-31846528)
chr8 (140-184)||(34925389-34925432)
chr8 (152-215)||(8437917-8437979)
chr8 (127-186)||(8443296-8443354)
chr8 (153-216)||(34923861-34923922)
chr8 (127-213)||(36016731-36016814)
chr8 (158-213)||(40791756-40791810)
chr8 (127-213)||(11141032-11141116)
chr8 (127-213)||(14094121-14094205)
chr8 (49-115)||(30991359-30991425)
chr8 (142-187)||(12336278-12336322)
chr8 (128-185)||(37872839-37872895)
chr8 (129-185)||(253572-253627)
chr8 (129-185)||(662231-662286)
chr8 (129-185)||(848029-848084)
chr8 (129-185)||(37266115-37266170)
chr8 (127-211)||(44284321-44284403)
chr8 (48-119)||(13573303-13573374)
chr8 (60-115)||(43764211-43764266)
chr8 (127-213)||(4855905-4855989)
chr8 (153-187)||(13421488-13421522)
chr8 (127-185)||(14879569-14879626)
chr8 (130-184)||(30056337-30056390)
chr8 (153-215)||(30353864-30353925)
chr8 (160-213)||(3075328-3075380)
chr8 (140-213)||(3075950-3076021)
chr8 (45-94)||(8438580-8438629)
chr8 (50-119)||(10674405-10674474)
chr8 (49-118)||(11140216-11140285)
chr8 (127-184)||(11760038-11760094)
chr8 (140-185)||(17734895-17734939)
chr8 (50-119)||(33969115-33969184)
chr8 (128-181)||(34363963-34364015)
chr8 (126-183)||(34678646-34678702)
chr8 (140-181)||(37836972-37837012)
chr8 (158-215)||(41312381-41312437)
chr8 (152-213)||(43764100-43764160)
chr8 (140-185)||(44746223-44746267)
chr8 (158-187)||(44746840-44746869)
chr8 (49-117)||(3075428-3075496)
chr8 (49-117)||(8297689-8297757)
chr8 (153-213)||(8442678-8442737)
chr8 (153-185)||(11140143-11140175)
chr8 (127-183)||(13439530-13439584)
chr8 (153-213)||(14880184-14880243)
chr8 (161-213)||(17565342-17565393)
chr8 (153-213)||(22934311-22934370)
chr8 (153-213)||(25485422-25485481)
chr8 (59-119)||(25597802-25597862)
chr8 (49-117)||(25598345-25598413)
chr8 (153-185)||(31739558-31739590)
chr8 (131-183)||(32903664-32903716)
[»] chr2 (53 HSPs)
chr2 (127-213)||(37009630-37009714)
chr2 (127-213)||(4437949-4438033)
chr2 (127-213)||(37199570-37199654)
chr2 (127-185)||(31597271-31597328)
chr2 (59-119)||(31709621-31709681)
chr2 (29-119)||(5113701-5113791)
chr2 (127-213)||(34173684-34173768)
chr2 (129-185)||(6229857-6229912)
chr2 (127-186)||(37329745-37329803)
chr2 (127-185)||(3045569-3045626)
chr2 (127-205)||(22298221-22298297)
chr2 (127-185)||(33146081-33146138)
chr2 (127-205)||(33476527-33476603)
chr2 (49-119)||(42791601-42791671)
chr2 (140-185)||(3515456-3515500)
chr2 (140-185)||(31709113-31709157)
chr2 (140-185)||(40769353-40769397)
chr2 (141-185)||(11564453-11564496)
chr2 (127-215)||(13873956-13874042)
chr2 (127-215)||(14014081-14014167)
chr2 (153-213)||(17829070-17829129)
chr2 (49-117)||(38972583-38972651)
chr2 (127-187)||(43439769-43439828)
chr2 (127-213)||(11796781-11796864)
chr2 (136-183)||(17449769-17449815)
chr2 (142-213)||(28167559-28167628)
chr2 (155-185)||(3044974-3045004)
chr2 (153-215)||(10357116-10357177)
chr2 (127-181)||(11052199-11052252)
chr2 (127-213)||(22606953-22607037)
chr2 (163-217)||(38910690-38910743)
chr2 (127-185)||(41077540-41077597)
chr2 (29-119)||(41078043-41078133)
chr2 (127-216)||(1366383-1366470)
chr2 (127-188)||(5790051-5790111)
chr2 (140-185)||(7939373-7939417)
chr2 (163-216)||(11942943-11942995)
chr2 (133-186)||(38911308-38911361)
chr2 (49-118)||(43439247-43439315)
chr2 (128-184)||(1534214-1534269)
chr2 (153-185)||(4437358-4437390)
chr2 (153-185)||(5474670-5474702)
chr2 (59-107)||(14743025-14743073)
chr2 (153-185)||(15006476-15006508)
chr2 (153-213)||(20894276-20894335)
chr2 (153-185)||(33146698-33146730)
chr2 (153-185)||(34173092-34173124)
chr2 (49-117)||(34247949-34248017)
chr2 (153-185)||(35175668-35175700)
chr2 (59-115)||(35657465-35657521)
chr2 (49-117)||(35899257-35899325)
chr2 (153-185)||(37198970-37199002)
chr2 (153-185)||(41521663-41521695)
[»] chr4 (59 HSPs)
chr4 (29-119)||(29979594-29979684)
chr4 (127-213)||(23722022-23722106)
chr4 (127-213)||(35665972-35666056)
chr4 (127-185)||(19313392-19313449)
chr4 (49-119)||(21037836-21037906)
chr4 (127-217)||(30193141-30193229)
chr4 (130-183)||(7797587-7797639)
chr4 (128-213)||(38720591-38720674)
chr4 (140-213)||(55068863-55068934)
chr4 (153-213)||(37708795-37708854)
chr4 (142-213)||(754888-754957)
chr4 (130-185)||(7479320-7479374)
chr4 (127-186)||(8138368-8138426)
chr4 (142-185)||(13482230-13482272)
chr4 (49-115)||(9784706-9784772)
chr4 (49-119)||(16191771-16191841)
chr4 (127-213)||(16192286-16192370)
chr4 (153-215)||(17722768-17722829)
chr4 (127-205)||(21037326-21037402)
chr4 (126-184)||(29979104-29979161)
chr4 (59-117)||(36408443-36408501)
chr4 (59-117)||(36422609-36422667)
chr4 (158-216)||(45847768-45847825)
chr4 (127-185)||(51019698-51019755)
chr4 (140-202)||(51268533-51268593)
chr4 (127-181)||(54096686-54096739)
chr4 (127-183)||(7479951-7480005)
chr4 (140-185)||(25010041-25010085)
chr4 (140-185)||(35667365-35667409)
chr4 (140-205)||(37147767-37147830)
chr4 (153-213)||(755522-755581)
chr4 (127-211)||(4949956-4950038)
chr4 (127-187)||(17730151-17730210)
chr4 (153-213)||(26705665-26705724)
chr4 (153-213)||(35667279-35667338)
chr4 (142-205)||(721965-722026)
chr4 (140-187)||(36898083-36898129)
chr4 (158-213)||(41919909-41919963)
chr4 (127-185)||(6711279-6711336)
chr4 (49-115)||(16960325-16960391)
chr4 (127-185)||(32448911-32448968)
chr4 (127-213)||(33046580-33046664)
chr4 (159-213)||(35667758-35667811)
chr4 (127-185)||(37424418-37424474)
chr4 (127-181)||(54092809-54092862)
chr4 (49-119)||(55069399-55069469)
chr4 (44-117)||(10155618-10155691)
chr4 (49-117)||(616019-616087)
chr4 (153-213)||(721342-721401)
chr4 (153-213)||(796403-796462)
chr4 (49-117)||(7165965-7166033)
chr4 (153-213)||(8192986-8193045)
chr4 (49-117)||(13395309-13395377)
chr4 (153-185)||(16960252-16960284)
chr4 (161-205)||(16960878-16960921)
chr4 (49-117)||(23308918-23308986)
chr4 (160-216)||(33047232-33047287)
chr4 (59-119)||(37423273-37423333)
chr4 (141-185)||(48372462-48372505)
[»] chr3 (68 HSPs)
chr3 (49-119)||(40974157-40974227)
chr3 (50-119)||(44499453-44499522)
chr3 (135-218)||(1364030-1364111)
chr3 (140-213)||(23682013-23682084)
chr3 (140-213)||(24054250-24054321)
chr3 (127-185)||(291158-291215)
chr3 (127-213)||(30605316-30605400)
chr3 (127-185)||(40036366-40036423)
chr3 (126-184)||(44950359-44950416)
chr3 (146-216)||(47794640-47794709)
chr3 (127-213)||(49765099-49765183)
chr3 (127-213)||(54403581-54403665)
chr3 (140-213)||(18364652-18364723)
chr3 (129-185)||(17764934-17764989)
chr3 (129-185)||(19066254-19066309)
chr3 (49-117)||(23309506-23309574)
chr3 (134-205)||(32222067-32222136)
chr3 (146-205)||(41587300-41587357)
chr3 (129-184)||(53490703-53490757)
chr3 (131-213)||(1262419-1262499)
chr3 (155-213)||(2756604-2756661)
chr3 (50-116)||(41586767-41586833)
chr3 (140-185)||(3090401-3090445)
chr3 (128-213)||(11345330-11345413)
chr3 (127-216)||(25480546-25480633)
chr3 (140-213)||(44500026-44500097)
chr3 (49-114)||(45241733-45241798)
chr3 (49-117)||(4757117-4757185)
chr3 (49-117)||(11055913-11055981)
chr3 (153-213)||(18365276-18365335)
chr3 (59-119)||(33314199-33314259)
chr3 (153-216)||(4558051-4558113)
chr3 (153-216)||(11581855-11581917)
chr3 (56-119)||(19538250-19538313)
chr3 (126-185)||(27394300-27394358)
chr3 (49-119)||(1363504-1363574)
chr3 (131-185)||(11397636-11397689)
chr3 (49-115)||(11581989-11582055)
chr3 (127-185)||(40974668-40974725)
chr3 (48-94)||(45851803-45851849)
chr3 (127-216)||(48841993-48842079)
chr3 (148-210)||(54605787-54605847)
chr3 (153-187)||(54606419-54606453)
chr3 (127-184)||(3541054-3541110)
chr3 (140-185)||(13623224-13623268)
chr3 (50-119)||(27394959-27395028)
chr3 (127-184)||(30127642-30127698)
chr3 (130-183)||(48223611-48223663)
chr3 (50-119)||(54404115-54404184)
chr3 (153-185)||(3089799-3089831)
chr3 (49-117)||(4558154-4558222)
chr3 (153-185)||(5963106-5963138)
chr3 (127-183)||(6296715-6296770)
chr3 (127-211)||(7724591-7724673)
chr3 (141-185)||(9830323-9830366)
chr3 (153-213)||(10887732-10887791)
chr3 (49-117)||(10887832-10887900)
chr3 (49-117)||(14601996-14602064)
chr3 (59-119)||(19546914-19546974)
chr3 (49-117)||(22129809-22129877)
chr3 (49-117)||(22524240-22524308)
chr3 (49-117)||(24542867-24542935)
chr3 (49-117)||(32737057-32737125)
chr3 (153-213)||(37183100-37183159)
chr3 (153-185)||(40927542-40927574)
chr3 (59-119)||(48224021-48224081)
chr3 (153-185)||(49080604-49080636)
chr3 (153-213)||(53490071-53490129)
[»] chr1 (48 HSPs)
chr1 (127-215)||(18406547-18406633)
chr1 (142-213)||(16536391-16536460)
chr1 (128-187)||(44648664-44648722)
chr1 (127-185)||(27225722-27225779)
chr1 (49-119)||(28045030-28045100)
chr1 (131-213)||(45559739-45559819)
chr1 (127-213)||(45737324-45737408)
chr1 (128-213)||(44645280-44645363)
chr1 (140-184)||(17109352-17109395)
chr1 (153-216)||(8061042-8061104)
chr1 (127-185)||(19071758-19071814)
chr1 (127-185)||(19119648-19119704)
chr1 (140-217)||(31765351-31765424)
chr1 (49-119)||(1386531-1386601)
chr1 (127-185)||(10012422-10012479)
chr1 (127-213)||(36604746-36604830)
chr1 (130-184)||(42831175-42831228)
chr1 (127-185)||(45738046-45738103)
chr1 (140-213)||(28044498-28044569)
chr1 (44-108)||(831829-831893)
chr1 (49-117)||(25068893-25068961)
chr1 (49-117)||(38011740-38011808)
chr1 (153-213)||(45738666-45738725)
chr1 (127-213)||(1116453-1116540)
chr1 (77-120)||(1116992-1117035)
chr1 (140-187)||(4667526-4667572)
chr1 (127-202)||(28198094-28198167)
chr1 (140-215)||(43320561-43320634)
chr1 (156-187)||(46682719-46682750)
chr1 (49-119)||(13574047-13574117)
chr1 (50-116)||(20585105-20585171)
chr1 (153-215)||(29510474-29510535)
chr1 (50-116)||(45195126-45195192)
chr1 (140-185)||(28970877-28970921)
chr1 (130-183)||(33126827-33126879)
chr1 (152-185)||(45195233-45195266)
chr1 (129-185)||(2275135-2275190)
chr1 (43-119)||(15357047-15357123)
chr1 (59-119)||(16536905-16536965)
chr1 (153-213)||(19072354-19072413)
chr1 (153-213)||(19120244-19120303)
chr1 (127-175)||(25087357-25087404)
chr1 (59-119)||(27226210-27226270)
chr1 (49-117)||(31765890-31765957)
chr1 (153-213)||(41575193-41575252)
chr1 (131-183)||(47233108-47233159)
chr1 (147-211)||(50143406-50143468)
chr1 (49-117)||(52505413-52505481)
[»] scaffold0189 (1 HSPs)
scaffold0189 (130-185)||(11336-11390)
[»] scaffold0068 (1 HSPs)
scaffold0068 (127-185)||(59307-59364)
[»] chr7 (66 HSPs)
chr7 (127-213)||(31221426-31221510)
chr7 (127-213)||(38987772-38987856)
chr7 (127-213)||(40401522-40401606)
chr7 (127-184)||(48872059-48872115)
chr7 (127-199)||(16425980-16426050)
chr7 (127-187)||(28308641-28308700)
chr7 (127-185)||(3391804-3391861)
chr7 (129-213)||(11639916-11639998)
chr7 (59-119)||(23742544-23742604)
chr7 (49-117)||(32867789-32867857)
chr7 (153-213)||(32867898-32867957)
chr7 (142-185)||(20261567-20261609)
chr7 (49-119)||(1573205-1573275)
chr7 (127-185)||(5227899-5227956)
chr7 (127-213)||(19333021-19333105)
chr7 (127-185)||(22711681-22711738)
chr7 (127-213)||(46011090-46011174)
chr7 (140-185)||(12677146-12677190)
chr7 (127-184)||(23232912-23232968)
chr7 (132-185)||(30869955-30870007)
chr7 (127-216)||(36688830-36688917)
chr7 (127-216)||(36848468-36848555)
chr7 (153-213)||(14078376-14078435)
chr7 (153-213)||(14388404-14388463)
chr7 (59-119)||(46208757-46208817)
chr7 (153-216)||(25607607-25607669)
chr7 (142-213)||(27619619-27619688)
chr7 (163-213)||(2935766-2935815)
chr7 (61-119)||(3340905-3340963)
chr7 (45-119)||(29736678-29736752)
chr7 (131-185)||(32387527-32387580)
chr7 (153-187)||(33869238-33869272)
chr7 (127-185)||(42813069-42813126)
chr7 (80-117)||(25407-25444)
chr7 (140-213)||(2790100-2790171)
chr7 (50-119)||(5228523-5228592)
chr7 (140-185)||(12679041-12679085)
chr7 (127-176)||(23226393-23226441)
chr7 (50-119)||(23233375-23233444)
chr7 (127-176)||(23235546-23235594)
chr7 (50-119)||(23243036-23243105)
chr7 (140-215)||(26200461-26200534)
chr7 (140-185)||(29615563-29615607)
chr7 (127-184)||(33576662-33576718)
chr7 (159-216)||(36687313-36687369)
chr7 (153-213)||(25276-25335)
chr7 (153-213)||(317298-317357)
chr7 (49-117)||(317398-317466)
chr7 (49-117)||(2146156-2146224)
chr7 (59-119)||(2146862-2146922)
chr7 (127-187)||(3341411-3341470)
chr7 (63-115)||(14078490-14078542)
chr7 (63-115)||(14388518-14388570)
chr7 (159-187)||(14753878-14753906)
chr7 (153-213)||(19156071-19156130)
chr7 (153-213)||(20755470-20755529)
chr7 (49-117)||(25607498-25607566)
chr7 (153-185)||(27144228-27144260)
chr7 (159-215)||(27144842-27144897)
chr7 (49-117)||(29823450-29823518)
chr7 (59-119)||(31872586-31872646)
chr7 (60-119)||(32388032-32388091)
chr7 (153-185)||(34999232-34999264)
chr7 (153-185)||(36847879-36847911)
chr7 (33-117)||(38670570-38670654)
chr7 (153-185)||(48982534-48982566)
[»] chr6 (52 HSPs)
chr6 (127-185)||(21802575-21802632)
chr6 (44-119)||(6936489-6936564)
chr6 (127-186)||(31282216-31282274)
chr6 (130-213)||(32114381-32114462)
chr6 (127-213)||(14313211-14313295)
chr6 (132-185)||(14306838-14306890)
chr6 (158-205)||(7448891-7448937)
chr6 (129-184)||(15499469-15499523)
chr6 (48-115)||(17336943-17337010)
chr6 (56-119)||(34794407-34794470)
chr6 (153-215)||(11794763-11794824)
chr6 (59-120)||(22268537-22268598)
chr6 (59-119)||(187796-187856)
chr6 (153-213)||(12026193-12026252)
chr6 (153-213)||(12693865-12693924)
chr6 (49-117)||(14873137-14873205)
chr6 (141-185)||(22342144-22342187)
chr6 (49-117)||(34709346-34709414)
chr6 (142-185)||(2522715-2522757)
chr6 (127-216)||(4101095-4101180)
chr6 (134-185)||(17307252-17307302)
chr6 (141-212)||(22342208-22342277)
chr6 (130-205)||(32521863-32521936)
chr6 (132-187)||(34793906-34793960)
chr6 (127-185)||(2092308-2092365)
chr6 (127-185)||(4126458-4126515)
chr6 (147-213)||(10702925-10702989)
chr6 (49-119)||(12767055-12767125)
chr6 (127-185)||(12767577-12767634)
chr6 (127-185)||(21847340-21847397)
chr6 (153-215)||(32522499-32522560)
chr6 (158-215)||(188434-188490)
chr6 (48-117)||(3767633-3767702)
chr6 (50-119)||(4100640-4100709)
chr6 (50-119)||(4126002-4126071)
chr6 (140-185)||(6937888-6937932)
chr6 (49-117)||(188320-188388)
chr6 (153-185)||(4100561-4100593)
chr6 (153-185)||(4125923-4125955)
chr6 (49-117)||(7127544-7127612)
chr6 (49-117)||(9240978-9241046)
chr6 (153-185)||(10702317-10702349)
chr6 (153-213)||(11522819-11522878)
chr6 (59-119)||(12025543-12025603)
chr6 (49-117)||(12026084-12026152)
chr6 (49-117)||(12033004-12033072)
chr6 (153-213)||(12033113-12033172)
chr6 (153-213)||(14313845-14313904)
chr6 (49-117)||(25577088-25577156)
chr6 (153-185)||(32113785-32113817)
chr6 (153-185)||(32130982-32131014)
chr6 (163-215)||(34794528-34794579)
[»] chr5 (48 HSPs)
chr5 (127-185)||(8573319-8573376)
chr5 (49-119)||(8007181-8007251)
chr5 (127-185)||(14594116-14594173)
chr5 (127-213)||(17780366-17780450)
chr5 (127-185)||(36742168-36742225)
chr5 (48-117)||(6048104-6048173)
chr5 (140-213)||(27979251-27979322)
chr5 (153-213)||(35751536-35751595)
chr5 (140-216)||(36737432-36737506)
chr5 (127-185)||(3933949-3934006)
chr5 (127-213)||(20183984-20184068)
chr5 (127-213)||(36762134-36762218)
chr5 (127-184)||(141589-141645)
chr5 (127-184)||(10687636-10687692)
chr5 (128-185)||(12585655-12585711)
chr5 (140-185)||(20259987-20260031)
chr5 (50-119)||(30782834-30782903)
chr5 (127-187)||(1406206-1406265)
chr5 (49-117)||(4054846-4054914)
chr5 (161-217)||(9118851-9118906)
chr5 (153-213)||(19408559-19408618)
chr5 (127-183)||(19500815-19500870)
chr5 (153-213)||(20183380-20183439)
chr5 (158-213)||(15144432-15144486)
chr5 (127-185)||(18523775-18523831)
chr5 (126-185)||(20570205-20570263)
chr5 (44-119)||(40957299-40957374)
chr5 (153-211)||(20570150-20570207)
chr5 (131-188)||(35751020-35751074)
chr5 (81-119)||(38497912-38497950)
chr5 (128-213)||(1931993-1932076)
chr5 (80-117)||(9118984-9119021)
chr5 (127-184)||(13279527-13279583)
chr5 (59-116)||(22730516-22730573)
chr5 (130-213)||(38955534-38955620)
chr5 (63-119)||(1931409-1931465)
chr5 (153-185)||(4877370-4877402)
chr5 (127-215)||(8007697-8007783)
chr5 (153-213)||(9017667-9017726)
chr5 (58-94)||(12548441-12548477)
chr5 (59-119)||(13280031-13280091)
chr5 (129-185)||(13686015-13686070)
chr5 (49-117)||(20691685-20691752)
chr5 (153-213)||(21639038-21639097)
chr5 (49-117)||(24625381-24625449)
chr5 (161-217)||(27028644-27028699)
chr5 (59-119)||(27979784-27979844)
chr5 (153-185)||(36742577-36742609)
[»] scaffold0003 (4 HSPs)
scaffold0003 (127-199)||(14693-14763)
scaffold0003 (127-199)||(28839-28909)
scaffold0003 (142-213)||(421167-421236)
scaffold0003 (153-213)||(421925-421984)
[»] scaffold0695 (1 HSPs)
scaffold0695 (127-213)||(2243-2327)
[»] scaffold0368 (1 HSPs)
scaffold0368 (130-184)||(11231-11284)
[»] scaffold0340 (2 HSPs)
scaffold0340 (127-213)||(12210-12294)
scaffold0340 (153-213)||(12855-12914)
[»] scaffold0001 (1 HSPs)
scaffold0001 (131-185)||(185159-185212)
[»] scaffold0971 (1 HSPs)
scaffold0971 (127-179)||(3152-3203)
[»] scaffold0361 (1 HSPs)
scaffold0361 (140-185)||(17132-17176)
[»] scaffold0159 (1 HSPs)
scaffold0159 (127-188)||(34424-34484)
[»] scaffold0115 (1 HSPs)
scaffold0115 (58-119)||(33332-33393)
[»] scaffold0102 (1 HSPs)
scaffold0102 (140-213)||(26373-26443)
[»] scaffold0051 (1 HSPs)
scaffold0051 (140-185)||(11613-11657)
[»] scaffold0037 (1 HSPs)
scaffold0037 (140-185)||(100050-100094)
[»] scaffold0289 (1 HSPs)
scaffold0289 (153-185)||(3455-3487)
[»] scaffold0201 (1 HSPs)
scaffold0201 (153-213)||(15324-15383)
[»] scaffold0105 (1 HSPs)
scaffold0105 (153-213)||(19642-19701)
[»] scaffold0034 (1 HSPs)
scaffold0034 (131-183)||(25955-26006)
[»] scaffold0006 (1 HSPs)
scaffold0006 (141-185)||(161304-161347)


Alignment Details
Target: chr8 (Bit Score: 158; Significance: 6e-84; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 214 - 411
Target Start/End: Original strand, 15849793 - 15849989
Alignment:
Q  214 aagaatgaccagaaatcaagttgataacattactgctaaatgtgggagtgaacaaatgtaagctaataaggaagctctgagatgatgattctcaaacatg 313  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  15849793 aagaatgaccagaaatcaagttgatgacatt-ctgctaaaggtgggagtgaacaaatgttagctaataaggaagctctgggaggatgattctcaaacatg 15849891  T
Q  314 ctcagtcacatggacttggatgatctcagatggaatcttaagcgtcgtttgcttcctcatcttgatgaatctgccagagatctatatgtttgtctctg 411  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15849892 ctcagtcacatggacttagatgatctcagatggaatcttaagcgtcatttgcttcctcatcttgatgaatctgccagagatctatatgtttgtgtctg 15849989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 217
Target Start/End: Original strand, 15847958 - 15848154
Alignment:
Q  29 aaacatttcattcttctcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaata----ttttaacat 124  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    |||||||||    
T  15847958 aaacattccattcctctcttctaaaaaaaacttgaattacattcatcttctctcttatgttaaaatttacactttactccctcaatattttttttaacat 15848057  T
Q  125 aagagg-------ggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 217  Q
    ||||||       |||||||| |||||||||||||| ||||| | ||| ||||||||||||||||||| |   |||||||||||||||||||||||||||    
T  15848058 aagaggggagagaggagtgtanattttacttttcaaaggaagagaagtatatattttaacataagagggg---aggagtataattcaatcatctttaaga 15848154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 17564774 - 17564717
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||    
T  17564774 gaggggagtataaattttacttttcaaggga-ggggagtgtatattttaacataagagg 17564717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 21304087 - 21304156
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| || ||||||||||||||| || ||||||||| ||||||| | ||||||||||||||||||||||    
T  21304087 taagagaagcttgaattacattcacctcctctcttatgttaaaatctacactttactccctcaatatttt 21304156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 13439545 - 13439478
Alignment:
Q  113 atattttaacataagaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataa 181  Q
    ||||||||||| |||| |||||| || |||||| |||||||||| ||||||||||||||||||||||||    
T  13439545 atattttaacacaagaagggagtataaattttaattttcaaggg-aggggagtgtatattttaacataa 13439478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 40791149 - 40791068
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||| || |||||||||||||||||| ||| ||||||||||||||||||||||| |||   ||||||||||||| |||||||    
T  40791149 gggagtataaattttacttttcaaggga-gggtagtgtatattttaacataagagg-ggaggagagtataattcaaacatcttt 40791068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 31740120 - 31740177
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||| ||||||||    
T  31740120 gaggggagtataaattttacttttcaaggga-ggggagtgtatattttaatataagagg 31740177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 21304044 - 21303984
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttta 214  Q
    |||| |||| ||||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  21304044 aggggagggaagtgtatattttaacataagagg-ggaaagaaatataattcaatcatcttta 21303984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 30353976 - 30354032
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaata 115  Q
    |||||||||||||| ||| | ||||||||||||||| | ||||||||||||||||||    
T  30353976 cttgaattacattcctctcccctcttatattaaaatctacactttactccctcaata 30354032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 31846528 - 31846469
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||||||||||||||||||||||| |||  | ||| ||||||||||||||||    
T  31846528 agggaaggggagtgtatattttaacataagagg-ggagggaagtgtaattcaatcatcttt 31846469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 34925389 - 34925432
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  34925389 attttacttttcaaggga-ggggagtgtatattttaacataagag 34925432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 8437979 - 8437917
Alignment:
Q  152 aagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    ||||| |||||||||||||||||||||||||| |||||  ||||| |||||||| |||||||||    
T  8437979 aaggggaggggagtgtatattttaacataaga-gaggagtggagtgtaattcaaacatctttaa 8437917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 8443296 - 8443354
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagga 186  Q
    |||| |||| || |||||||||||||||||||||  ||||||||||||||||||||||||    
T  8443296 gaggagagtataaattttacttttcaagggaagga-agtgtatattttaacataagagga 8443354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 34923922 - 34923861
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    |||| |||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||    
T  34923922 aggggaggggagtgtatattttaacataaga-gagg-agggagtataattcaagcatctttaag 34923861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 36016731 - 36016814
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| || ||||||||||||||||||  |||||||||||||||||||||||| |||||  ||| | |||||||| |||||||    
T  36016731 gaggagagtataaattttacttttcaaggga--gggagtgtatattttaacataaga-gaggaggggattgtaattcaagcatcttt 36016814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 40791756 - 40791810
Alignment:
Q  158 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  40791756 aggggagtgtatattttaacataagagg-ggagaggagtgtaattcaagcatcttt 40791810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 11141032 - 11141116
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || |||||| |||||| |||| ||||||||||||||||||||||||| |||||  ||| | |||||||| |||||||    
T  11141032 gaggggagtataaattttatttttcatggga-ggggagtgtatattttaacataaga-gaggaggggaatgtaattcaagcatcttt 11141116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 14094121 - 14094205
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| || ||||| |||||||||||| |||||||||| |||||||||||||||| |||  ||||| |||||||| |||||||    
T  14094121 gaggagagtataaatttttcttttcaaggga-ggggagtgtaaattttaacataagagg-ggaggggagtgtaattcaagcatcttt 14094205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 30991425 - 30991359
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaata 115  Q
    |||||| || ||||||||||||||  || ||||||||| ||||||| | ||||||||||||||||||    
T  30991425 ctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacactttactccctcaata 30991359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 12336278 - 12336322
Alignment:
Q  142 tttacttttcaagggaaggggagtgtatattttaacataagaggag 187  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  12336278 tttacttttcaaggga-gggaagtgtatattttaacataagaggag 12336322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 37872839 - 37872895
Alignment:
Q  128 aggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||| ||  ||||||||||||||| ||||||| |||||||||||||||||||||    
T  37872839 aggggagtataacttttacttttcaagg-aaggggaatgtatattttaacataagagg 37872895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 253627 - 253572
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||| || || ||||||||||||||| | |||||||||||||||||||||||||    
T  253627 ggggagtataaatcttacttttcaaggga-gaggagtgtatattttaacataagagg 253572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 662231 - 662286
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||| || || ||||||||||||||| | |||||||||||||||||||||||||    
T  662231 ggggagtataaatcttacttttcaaggga-gaggagtgtatattttaacataagagg 662286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 848029 - 848084
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||| || || ||||||||||||||| | |||||||||||||||||||||||||    
T  848029 ggggagtataaatcttacttttcaaggga-gaggagtgtatattttaacataagagg 848084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 37266115 - 37266170
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||| || || ||||||||||||||| | |||||||||||||||||||||||||    
T  37266115 ggggagtataaatcttacttttcaaggga-gtggagtgtatattttaacataagagg 37266170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 44284321 - 44284403
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatct 211  Q
    ||||||||| || |||||| ||||||||||| ||  ||||||||||||||||||||||| |||  ||||| |||||||| |||||    
T  44284321 gaggggagtataaattttatttttcaaggga-ggaaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatct 44284403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 13573303 - 13573374
Alignment:
Q  48 tctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||| ||||||||| |||||||  ||   |||||||| |||||| | ||||||||||||||||||||||    
T  13573303 tctaagagaaacttgaactacattcccctctcctcttataataaaatctacactttactccctcaatatttt 13573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 43764211 - 43764266
Alignment:
Q  60 ttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaata 115  Q
    |||||||||||||  |||| ||||||| ||||||||| |||||||||| |||||||    
T  43764211 ttgaattacattccccttccctcttatgttaaaatttacactttactcgctcaata 43764266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 4855905 - 4855989
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||| | || |||||||||| ||||| ||||  ||||||||||||||||||||| || || |||||| |||||||| |||||||    
T  4855905 gaggggactataaattttactttacaagg-aaggaaagtgtatattttaacataaga-gatgagaggagtgtaattcaaacatcttt 4855989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 13421522 - 13421488
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggag 187  Q
    |||| ||||||||||||||||||||||||||||||    
T  13421522 aggggaggggagtgtatattttaacataagaggag 13421488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 14879626 - 14879569
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||||||||| | || | |||||||||||||||||||||    
T  14879626 gaggggagtataaattttacttttcaaggg-acggaaatgtatattttaacataagagg 14879569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 30056390 - 30056337
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    |||||| || |||||||||||||||||| || | |||||||||||||||||||||    
T  30056390 gggagtataaattttacttttcaaggga-ggagtgtgtatattttaacataagag 30056337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 30353925 - 30353864
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    |||| |||| |||||||||||||||||||||||| ||| | ||| |||||||| |||||||||    
T  30353925 aggggagggaagtgtatattttaacataagagga-gaaggaagtgtaattcaagcatctttaa 30353864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 3075380 - 3075328
Alignment:
Q  160 gggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  3075380 gggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 3075328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 3075950 - 3076021
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||| |||||||| || |||||||||||||||||| ||||||||| ||  ||||| |||||||| |||||||    
T  3075950 attttatttttcaagaga-ggggagtgtatattttaatataagagga-gaggggagtgtaattcaagcatcttt 3076021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 8438629 - 8438580
Alignment:
Q  45 tcttctaagaaaaacttgaattacattcatcttctctcttatattaaaat 94  Q
    |||||||||| |||||||||||||| ||  |||||||||||| |||||||    
T  8438629 tcttctaagagaaacttgaattacactccacttctctcttatgttaaaat 8438580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 10674405 - 10674474
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| || ||||||||||||||| || |  |||||| ||||||| | |||||||||| |||||||||||    
T  10674405 taagagaagcttgaattacattcacctcccttcttatgttaaaatctacactttactctctcaatatttt 10674474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 11140216 - 11140285
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatattt 118  Q
    |||||| || ||||||||||||||  || | | ||||| ||||||| | |||||||||||||||||||||    
T  11140216 ctaagagaagcttgaattacattcccctccccccttatgttaaaatctacactttactccctcaatattt 11140285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 11760038 - 11760094
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    ||||||||| || |||||||||||||| ||| |  |||||||||||||||||||||||    
T  11760038 gaggggagtataaattttacttttcaaagga-gaagagtgtatattttaacataagag 11760094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 17734895 - 17734939
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||||| || || |||||||||||||||||||||    
T  17734895 attttacttttcaaggga-ggtgaatgtatattttaacataagagg 17734939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 33969115 - 33969184
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| ||||||||||| |||||  || | ||||||| ||||||| | ||||||||||||||||| ||||    
T  33969115 taagagaaacttgaattgcattctcctcccctcttatgttaaaatctacactttactccctcaatttttt 33969184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 34364015 - 34363963
Alignment:
Q  128 aggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataa 181  Q
    |||||||| || ||||||||||||||||| |||| | |||||||||||||||||    
T  34364015 aggggagtataaattttacttttcaaggg-agggaaatgtatattttaacataa 34363963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 34678702 - 34678646
Alignment:
Q  126 agaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    |||||||| | || ||||||||||| |||||| |||||||||||||||||||| ||||    
T  34678702 agaggggattataaattttactttttaaggga-ggggagtgtatattttaacacaaga 34678646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 37837012 - 37836972
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataa 181  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  37837012 attttacttttcaaggga-ggggaatgtatattttaacataa 37836972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 41312381 - 41312437
Alignment:
Q  158 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    |||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||||||    
T  41312381 aggggaatgtatattttaacataagagg-ggaggggagtgtaattcaagcatctttaa 41312437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 43764160 - 43764100
Alignment:
Q  152 aagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||| ||| |||||||||||||||||||||||| ||| || ||| |||||||| |||||||    
T  43764160 aaggggaggagagtgtatattttaacataagagg-ggagagaagtgtaattcaaacatcttt 43764100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 44746267 - 44746223
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||    
T  44746267 attttatttttcaaggga-ggggaatgtatattttaacataagagg 44746223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 187
Target Start/End: Original strand, 44746840 - 44746869
Alignment:
Q  158 aggggagtgtatattttaacataagaggag 187  Q
    ||||||||||||||||||||||||||||||    
T  44746840 aggggagtgtatattttaacataagaggag 44746869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 3075428 - 3075496
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||| ||||||||    
T  3075428 ctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccttcaatatt 3075496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 8297757 - 8297689
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  8297757 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 8297689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 8442737 - 8442678
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| ||||| |||||||||||||||||||||| ||||  |||| |||||||| |||||||    
T  8442737 agggtaggggtgtgtatattttaacataagagg-ggaagagagtgtaattcaagcatcttt 8442678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 11140175 - 11140143
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  11140175 aggggaggggagtgtatattttaacataagagg 11140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 13439584 - 13439530
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    ||||||||| || |||||||||| ||||| |||||||||||||||||||||| ||||    
T  13439584 gaggggagtataaattttacttt-caagg-aaggggagtgtatattttaacacaaga 13439530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 14880184 - 14880243
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  14880184 aggggagggaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 14880243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 17565342 - 17565393
Alignment:
Q  161 ggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||||||||||||||| ||| |||||| ||||| || |||||||    
T  17565342 ggagtgtatattttaacataagagg-ggagaggagtgtaattgaagcatcttt 17565393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 22934370 - 22934311
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  22934370 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 22934311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 25485422 - 25485481
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  25485422 agggtaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaaacatcttt 25485481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 25597802 - 25597862
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||| ||  || ||||||||  ||||||| | ||||||||||||||||||||||    
T  25597802 cttgaattacactcccctcctctcttaagttaaaatatacactttactccctcaatatttt 25597862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 25598413 - 25598345
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    ||||||||| |||||||||||| |  || | ||||||| ||||||| | ||||||||| ||||||||||    
T  25598413 ctaagaaaagcttgaattacatccccctcccctcttatgttaaaatctacactttactacctcaatatt 25598345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 31739590 - 31739558
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  31739590 aggggaggggagtgtatattttaacataagagg 31739558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 32903716 - 32903664
Alignment:
Q  131 ggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    ||||| || ||||||||||| ||||| ||  ||||||||||||||||||||||    
T  32903716 ggagtataaattttactttttaaggggagatgagtgtatattttaacataaga 32903664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 37009630 - 37009714
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||| || |||||||    
T  37009630 gaggggagtgtaaattttacttttcaaggga-ggggagtgtatattttaacataagagg-ggagaggagtgtaatttaagcatcttt 37009714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 4437949 - 4438033
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || |||||||||| ||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  4437949 gaggggagtataaattttactttacaagg-aaggggagtgtatattttaacataagagg-ggagaggagtgtaattcaaacatcttt 4438033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 37199570 - 37199654
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  37199570 gaggggagtataaattttacttttcaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaaacatcttt 37199654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 31597328 - 31597271
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  31597328 gaggggagtgtaaattttacttttcaaggg-aggggagtttatattttaacataagagg 31597271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 31709681 - 31709621
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||||||| || ||||||||| ||||||| | ||||||||||||||||||||||    
T  31709681 cttgaattacattcacctcctctcttatgttaaaatctacactttactccctcaatatttt 31709621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 5113701 - 5113791
Alignment:
Q  29 aaacatttcattcttctcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||| || ||||| ||||||||| ||||||||| ||||  || |  |||||| ||||||| | ||||||||||||||||||||||    
T  5113701 aaacatttcactcctctctcctaagaaaagcttgaattatattctcctccattcttatgttaaaatctacactttactccctcaatatttt 5113791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 34173684 - 34173768
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||| | || |||||||||||||||||| ||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  34173684 gaggggaatataaattttacttttcaaggga-ggggaatgtatattttaacataagagg-ggaggggagtgtaattcaaacatcttt 34173768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 6229857 - 6229912
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||| || || ||||||||||||||| |||||||||||||||||||||||||||    
T  6229857 ggggagtataaatcttacttttcaaggga-ggggagtgtatattttaacataagagg 6229912  T

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Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 37329803 - 37329745
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagga 186  Q
    ||||| ||| || |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  37329803 gagggtagtataaattttatttttcaaggga-ggggagtgtatattttaacataagagga 37329745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 3045569 - 3045626
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||||||| || ||| |||||||||||||||||||||||    
T  3045569 gaggggagtataaattttacttttcaagaga-gggaagtgtatattttaacataagagg 3045626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 22298221 - 22298297
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 205  Q
    ||||||||| || |||||| ||||||||||| |  |||||||||||||||||||||||| ||| |||||| ||||||||    
T  22298221 gaggggagtataaattttatttttcaaggga-gaagagtgtatattttaacataagagg-ggagaggagtgtaattcaa 22298297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 33146138 - 33146081
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||| || || ||||| |||||||||||| |||||||||||||||||||||||||||    
T  33146138 gaggggggtataaattttccttttcaaggga-ggggagtgtatattttaacataagagg 33146081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 33476527 - 33476603
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 205  Q
    |||| ||||||| ||||||||||||||| || |||||| |||||||||||||||||| ||||| | |||| ||||||||    
T  33476527 gaggagagtgtaaattttacttttcaagaga-ggggagcgtatattttaacataaga-gaggagatgagtgtaattcaa 33476603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 42791601 - 42791671
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||| || ||||||||||||||  || | ||||||||||||||| | ||||||||||||||||| ||||    
T  42791601 ctaagagaagcttgaattacattcccctcccctcttatattaaaatctacactttactccctcaatttttt 42791671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 3515456 - 3515500
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||    
T  3515456 attttacttttcaaagga-ggggagtgtatattttaacataagagg 3515500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 31709157 - 31709113
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||    
T  31709157 attttacttttcaagg-aagggaagtgtatattttaacataagagg 31709113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 40769353 - 40769397
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  40769353 attttacttttcaaggga-ggagagtgtatattttaacataagagg 40769397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 11564453 - 11564496
Alignment:
Q  141 ttttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||||||||||| || ||||||||||||||||||||||||    
T  11564453 ttttacttttcaaggga-ggagagtgtatattttaacataagagg 11564496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 13873956 - 13874042
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    ||||||||| |  |||||| ||||||||||| |  |||||||||||||||||||||| ||||| | |||| |||||||| |||||||||    
T  13873956 gaggggagtattaattttatttttcaaggga-gatgagtgtatattttaacataaga-gaggagaagagtgtaattcaaacatctttaa 13874042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 14014081 - 14014167
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    ||||||||| |  |||||| ||||||||||| |  |||||||||||||||||||||| ||||| | |||| |||||||| |||||||||    
T  14014081 gaggggagtattaattttatttttcaaggga-gatgagtgtatattttaacataaga-gaggagaagagtgtaattcaaacatctttaa 14014167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 17829129 - 17829070
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  17829129 aggggaggggagtgtatattttaacataagagg-ggagtggagtgtaattcaagcatcttt 17829070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 38972583 - 38972651
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| ||||||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  38972583 ctaagagaaacttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 38972651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 43439769 - 43439828
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggag 187  Q
    |||| |||| || |||||| ||||||||||| || ||||||||||||||||||||||||||    
T  43439769 gaggagagtataaattttatttttcaaggga-ggagagtgtatattttaacataagaggag 43439828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 11796781 - 11796864
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || ||||||||||||||||  |||| | ||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  11796781 gaggggagtataaattttacttttcaagg--agggaaatgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 11796864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 17449815 - 17449769
Alignment:
Q  136 gtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    ||||||||||||||| ||| || |||||||||||||||||||||||||    
T  17449815 gtagattttacttttgaagaga-ggggagtgtatattttaacataaga 17449769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 28167628 - 28167559
Alignment:
Q  142 tttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| |||||| || |||||||||||||||||||||||| | |  ||||| ||||||||||||||||    
T  28167628 tttactttttaaggga-ggagagtgtatattttaacataagagg-gaaggggagtgtaattcaatcatcttt 28167559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 185
Target Start/End: Complemental strand, 3045004 - 3044974
Alignment:
Q  155 ggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||||||||||||||||||    
T  3045004 ggaaggggagtgtatattttaacataagagg 3044974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 10357116 - 10357177
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||| ||||    
T  10357116 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcattaa 10357177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 11052199 - 11052252
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataa 181  Q
    ||||||||| || |||||| ||||||||||| ||||||| |||||||||||||||    
T  11052199 gaggggagtataaattttatttttcaaggga-ggggagtatatattttaacataa 11052252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 22606953 - 22607037
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| ||  ||||||||||| ||||||| | ||||||||||||||||||||| || ||  ||||| |||||||| |||||||    
T  22606953 gaggggagtataagttttacttttctagggaagag-agtgtatattttaacataaga-gaagaggggagtgtaattcaagcatcttt 22607037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 38910743 - 38910690
Alignment:
Q  163 agtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 217  Q
    ||||||||||||||||||||| |||||  ||||| |||||||| |||||||||||    
T  38910743 agtgtatattttaacataaga-gaggaggggagtgtaattcaaacatctttaaga 38910690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 41077597 - 41077540
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||| |||| || |||||||||||||| |||||||||||    
T  41077597 gaggggagtataaattttactttttaagg-aatgggagtgtatatttcaacataagagg 41077540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 41078133 - 41078043
Alignment:
Q  29 aaacatttcattcttctcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||| ||||||||| |||  |||||| || |||||||||||| | ||| | ||||||||||| ||| |  |||||||||||| ||||||||    
T  41078133 aaacttttcattctcctcccctaagagaagcttgaattacatccctctcccctcttatattagaatctatactttactcccttaatatttt 41078043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 1366383 - 1366470
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    ||||| ||| || ||||||||||||||| || ||| | ||||||||||||||||||| |||||   |||| |||||||| ||||||||||    
T  1366383 gagggaagtataaattttacttttcaagaga-gggaaatgtatattttaacataaga-gaggaggagagtgtaattcaaacatctttaag 1366470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 5790111 - 5790051
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggagg 188  Q
    ||||||||| || |||||| ||||||||||  | ||| ||||||||||||||||||||||||    
T  5790111 gaggggagtataaattttatttttcaagggt-gaggaatgtatattttaacataagaggagg 5790051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 7939417 - 7939373
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||    
T  7939417 attttacttttcaaggga-ggtaagtgtatattttaacataagagg 7939373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 11942943 - 11942995
Alignment:
Q  163 agtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    ||||||||||||||||||| |||| || | ||||||||||||| ||||||||||    
T  11942943 agtgtatattttaacataaaagga-gagatgagtataattcaaacatctttaag 11942995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 38911308 - 38911361
Alignment:
Q  133 agtgtagattttacttttcaagggaaggggagtgtatattttaacataagagga 186  Q
    |||||| |||||||||||| | ||||   |||||||||||||||||||||||||    
T  38911308 agtgtaaattttacttttctaaggaaaatgagtgtatattttaacataagagga 38911361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 43439247 - 43439315
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatattt 118  Q
    |||||| || |||||||||||||| || || | ||||| ||||||| | |||||||||||||||||||||    
T  43439247 ctaagagaagcttgaattacattc-tcctcccccttatgttaaaatctacactttactccctcaatattt 43439315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 1534269 - 1534214
Alignment:
Q  128 aggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    |||||||| || |||||||||||||||  ||||||| |||||||||||| |||||||    
T  1534269 aggggagtataaattttacttttcaagt-aaggggaatgtatattttaatataagag 1534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 4437390 - 4437358
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||||| |||||||||||||||||||||    
T  4437390 agggaaggggattgtatattttaacataagagg 4437358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 5474702 - 5474670
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  5474702 aggggaggggagtgtatattttaacataagagg 5474670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 14743073 - 14743025
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactc 107  Q
    ||||||||||||| |||| ||||||||| ||||||| | ||||||||||    
T  14743073 cttgaattacatttatctcctctcttatgttaaaatctacactttactc 14743025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 15006508 - 15006476
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  15006508 aggggaggggagtgtatattttaacataagagg 15006476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 20894276 - 20894335
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  20894276 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 20894335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 33146698 - 33146730
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  33146698 aggggaggggagtgtatattttaacataagagg 33146730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 34173124 - 34173092
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  34173124 aggggaggggagtgtatattttaacataagagg 34173092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 34248017 - 34247949
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  34248017 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 34247949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 35175700 - 35175668
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  35175700 aggggaggggagtgtatattttaacataagagg 35175668  T

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Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 35657465 - 35657521
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaata 115  Q
    ||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||||    
T  35657465 cttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaata 35657521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 35899257 - 35899325
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  35899257 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 35899325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 37199002 - 37198970
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  37199002 aggggaggggagtgtatattttaacataagagg 37198970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 41521663 - 41521695
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  41521663 aggggaggggagtgtatattttaacataagagg 41521695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 29979684 - 29979594
Alignment:
Q  29 aaacatttcattcttctcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||| ||| |||  |||| |||| |||||||| ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||    
T  29979684 aaacatttcactctcctcccctaataaaagcttgaattgcattcatcttccctcttatgttaaaatctacactttactccctcaatatttt 29979594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 23722022 - 23722106
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||| |||||| ||||||||||| ||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  23722022 gaggggagtgtaaattttatttttcaaggga-gggtagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 23722106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 35666056 - 35665972
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || ||||||||||||||||| |||  ||||||||||||||||||||| ||||| || |||||||||||| |||||||    
T  35666056 gaggggagtataaattttacttttcaaggg-aggtaagtgtatattttaacataaga-gaggagagaagtataattcaagcatcttt 35665972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 19313449 - 19313392
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||| |||||| |||| |||||| |||||||||||||||||||||||||||    
T  19313449 gaggggagtgtaaattttattttttaaggga-ggggagtgtatattttaacataagagg 19313392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 21037906 - 21037836
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||| || |||||||||||||  ||||| ||||||| ||||||| | ||||||||||||||||||||||    
T  21037906 ctaagagaagcttgaattacatttttcttccctcttatgttaaaatctacactttactccctcaatatttt 21037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 30193141 - 30193229
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 217  Q
    |||||||||||| |||| |||||||||| ||| ||||| |||||||| ||||||||| | |||| ||||| |||||||| |||||||||||    
T  30193141 gaggggagtgtaaatttcacttttcaagagaa-gggagcgtatatttcaacataagaag-ggaagggagtgtaattcaaacatctttaaga 30193229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 7797587 - 7797639
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||    
T  7797587 gggagtgtaaattttacttttcaaggg-agggaagtgtatattttaacataaga 7797639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 38720591 - 38720674
Alignment:
Q  128 aggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||||||||||||| |||||| |||  ||||||||||||||||||||| |||||   |||| |||||||| |||||||    
T  38720591 aggggagtgtagattttactttacaaggg-aggaaagtgtatattttaacataaga-gaggatgagagtgtaattcaaacatcttt 38720674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 55068934 - 55068863
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  55068934 attttactttacaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 55068863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 37708854 - 37708795
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  37708854 aggggaggggagtgtatattttaacataagagg-ggagaggagtgtaattcaagcatcttt 37708795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 754957 - 754888
Alignment:
Q  142 tttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||||||| |  |||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  754957 tttacttttcaaggga-gatgagtgtatattttaacataagagg-ggagaggagtgtaattcaagcatcttt 754888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 7479320 - 7479374
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||| || |||||||||||||||||| ||| |||||||||||||||||||||||    
T  7479320 gggagtataaattttacttttcaaggga-gggaagtgtatattttaacataagagg 7479374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 8138426 - 8138368
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagga 186  Q
    ||||||||| || |||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  8138426 gaggggagtataaattttatttttcaaggga-gggaagtgtatattttaacataagagga 8138368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 13482272 - 13482230
Alignment:
Q  142 tttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  13482272 tttacttttcaaggga-ggggagtgtatattttaacataagagg 13482230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 9784706 - 9784772
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaata 115  Q
    |||||| || |||||||||||||||||| | ||||||| ||||||| | ||||||||||| ||||||    
T  9784706 ctaagagaatcttgaattacattcatctcccctcttatgttaaaatctacactttactccttcaata 9784772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 16191771 - 16191841
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||| || ||||||||||||||  || | |||||||| |||||| | ||||||||||||||||||||||    
T  16191771 ctaagagaagcttgaattacattcccctcccctcttataataaaatctacactttactccctcaatatttt 16191841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 16192286 - 16192370
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || ||||||| || |||| || ||||||||||||||||||||||||| |||||  ||||| |||||||| |||||||    
T  16192286 gaggggagtataaattttacattgcaagtga-ggggagtgtatattttaacataaga-gaggaggggagtgtaattcaagcatcttt 16192370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 17722829 - 17722768
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||||    
T  17722829 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatctttaa 17722768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 21037402 - 21037326
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 205  Q
    ||||||||| || ||||||||||||||||| |||  ||||||||||||||||||||| |||||  ||||| ||||||||    
T  21037402 gaggggagtataaattttacttttcaaggg-aggaaagtgtatattttaacataaga-gaggaggggagtgtaattcaa 21037326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 29979161 - 29979104
Alignment:
Q  126 agaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    |||||||| |||||||||||||||||||| | ||| |||||||||||||||||| ||||    
T  29979161 agaggggaatgtagattttacttttcaagag-aggagagtgtatattttaacattagag 29979104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 36408501 - 36408443
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||||||||||| ||| | |||||||| |||||| | ||||||||||||||||||||    
T  36408501 cttgaattacattcctctcccctcttataataaaatctacactttactccctcaatatt 36408443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 36422667 - 36422609
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||||||||||| ||| | |||||||| |||||| | ||||||||||||||||||||    
T  36422667 cttgaattacattcctctcccctcttataataaaatctacactttactccctcaatatt 36422609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 45847768 - 45847825
Alignment:
Q  158 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    |||||||||||||||||||||||||| ||||| |||| | |||||||| ||||||||||    
T  45847768 aggggagtgtatattttaacataaga-gaggagaggattgtaattcaagcatctttaag 45847825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 51019755 - 51019698
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||| ||| || |||||||||||||||||| ||| |||||||||||||||||||||||    
T  51019755 gagggaagtataaattttacttttcaaggga-gggaagtgtatattttaacataagagg 51019698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 51268533 - 51268593
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataatt 202  Q
    |||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||||| |||||    
T  51268533 attttacttttcaagg-aagtggagtgtatattttaacataaga-gaggagaggagtgtaatt 51268593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 54096686 - 54096739
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataa 181  Q
    |||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||    
T  54096686 gaggggagtgtaaatttttcttttcaaggg-atgggagtgtatattttaacataa 54096739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 7479951 - 7480005
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    ||||||||| || ||||||||||||||||||  || |||||||||||||||||||||    
T  7479951 gaggggagtataaattttacttttcaaggga--ggaagtgtatattttaacataaga 7480005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 25010041 - 25010085
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||||||||||||| || |||||||||||||||||||||||    
T  25010041 attttacttttcaagggaatgg-agtgtatattttaacataagagg 25010085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 35667365 - 35667409
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  35667365 attttacttttcaaggga-gggaagtgtatattttaacataagagg 35667409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 37147830 - 37147767
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 205  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||||| ||| |||||| ||||||||    
T  37147830 attttaattttcaaggga-gggaagtgtatattttaacataagagg-ggagaggagtgtaattcaa 37147767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 755522 - 755581
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| |||||||||||||| |||||||| |||  |||||||||||||| |||||||    
T  755522 agggaagggaagtgtatattttaatataagagg-ggaggggagtataattcaagcatcttt 755581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 4950038 - 4949956
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatct 211  Q
    ||||||||| |  |||||| |||| |||||||||| ||||||||||||||||||||| |||||  ||||| |||||||| |||||    
T  4950038 gaggggagtattaattttattttttaagggaaggg-agtgtatattttaacataaga-gaggaggggagtgtaattcaaacatct 4949956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 17730151 - 17730210
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggag 187  Q
    ||||||| |||| |||||| ||||||||||| ||| ||||||||||||||||||| |||||    
T  17730151 gaggggattgtaaattttatttttcaaggga-gggtagtgtatattttaacataaaaggag 17730210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 26705665 - 26705724
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||| |||||  ||||| |||||||| |||||||    
T  26705665 aggggaggggagtgtatattttaacataaga-gaggaggggagtgtaattcaagcatcttt 26705724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 35667279 - 35667338
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  35667279 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 35667338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 721965 - 722026
Alignment:
Q  142 tttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 205  Q
    |||||||||||||||| |  |||||||||||||||||||||||| ||| |||||| ||||||||    
T  721965 tttacttttcaaggga-gatgagtgtatattttaacataagagg-ggagaggagtgtaattcaa 722026  T

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Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 36898083 - 36898129
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggag 187  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  36898083 atttttcttttcaaggga-ggggagtgtatattttaacataaaaggag 36898129  T

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Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 41919909 - 41919963
Alignment:
Q  158 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||||||||||||||||| ||||| | |||| |||||||| |||||||    
T  41919909 aggggagtgtatattttaacataaga-gaggagaagagtgtaattcaagcatcttt 41919963  T

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Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 6711336 - 6711279
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||||||||| ||||  ||||||||||||||| ||||||    
T  6711336 gaggggagtataaattttacttttcaaggg-agggaggtgtatattttaacacaagagg 6711279  T

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Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 16960325 - 16960391
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaata 115  Q
    |||||| || ||| |||||||||  ||||| ||||||| ||||||| | ||||||||||||||||||    
T  16960325 ctaagagaagcttaaattacatttctcttccctcttatgttaaaatctacactttactccctcaata 16960391  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 32448911 - 32448968
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| ||  ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  32448911 gaggggagtataacttttacttttcaaagga-gggaagtgtatattttaacataagagg 32448968  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 33046664 - 33046580
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| |  |||||||||||||||||| |   |||||| |||||||||||||||| ||| || ||| ||||||||||||||||    
T  33046664 gaggggagtattaattttacttttcaaggga-gtaaagtgtagattttaacataagagg-ggagagaagtgtaattcaatcatcttt 33046580  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 35667758 - 35667811
Alignment:
Q  159 ggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  35667758 ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 35667811  T

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Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 37424418 - 37424474
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||| ||||||| || ||||||||||||||||||||||||    
T  37424418 gaggggagtataaattttacttt-caaggga-ggtgagtgtatattttaacataagagg 37424474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 54092809 - 54092862
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataa 181  Q
    |||||||||||| ||||| ||||||||||| |||| | |||||||||||||||||    
T  54092809 gaggggagtgtaaatttttcttttcaaggg-agggaattgtatattttaacataa 54092862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 55069469 - 55069399
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||| ||||    
T  55069469 ctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaatttttt 55069399  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 10155618 - 10155691
Alignment:
Q  44 ctcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||| |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  10155618 ctctcctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 10155691  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 616087 - 616019
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  616087 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 616019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 721401 - 721342
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| |||||||||||||| |||||||| |||  ||||| |||||||| |||||||    
T  721401 agggaagggaagtgtatattttaatataagagg-ggaggggagtgtaattcaagcatcttt 721342  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 796462 - 796403
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  796462 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 796403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 7166033 - 7165965
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||||   || | ||||||| ||||||| | ||||||||||||||||||||    
T  7166033 ctaagagaagcttgaattacatttccctcccctcttatgttaaaatctacactttactccctcaatatt 7165965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 8192986 - 8193045
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  8192986 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 8193045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 13395309 - 13395377
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  13395309 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 13395377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 16960284 - 16960252
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  16960284 aggggaggggagtgtatattttaacataagagg 16960252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 16960878 - 16960921
Alignment:
Q  161 ggagtgtatattttaacataagaggaggaaaggagtataattcaa 205  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||    
T  16960878 ggagtgtatattttaacataagagga-gaggggagtataattcaa 16960921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 23308918 - 23308986
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  23308918 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 23308986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 33047232 - 33047287
Alignment:
Q  160 gggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    |||||||||||||||||||||||||| |||  ||||| |||||||| || |||||||    
T  33047232 gggagtgtatattttaacataagagg-ggaggggagtgtaattcaaacaactttaag 33047287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 37423273 - 37423333
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||||||| ||| | ||||||| ||||||| | | ||||| ||||||||||||||    
T  37423273 cttgaattacattcctctcccctcttatgttaaaatctacgctttagtccctcaatatttt 37423333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 48372505 - 48372462
Alignment:
Q  141 ttttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||    
T  48372505 tttttcttttcaaggga-ggggagtatatattttaacataagagg 48372462  T

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Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 40974157 - 40974227
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||| || |||||||||||||||||||| |||||||| |||||| | ||||||||||||||||||||||    
T  40974157 ctaagagaagcttgaattacattcatcttccctcttataataaaatctacactttactccctcaatatttt 40974227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 44499453 - 44499522
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| || |||||||||||||||||| ||||||||| ||||||| | ||||||||||||||||||||||    
T  44499453 taagagaagcttgaattacattcatctcctctcttatgttaaaatctacactttactccctcaatatttt 44499522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 1364030 - 1364111
Alignment:
Q  135 tgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaagaa 218  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||  ||||| |||||||| ||||||| ||||    
T  1364030 tgtagattttacttt-caaggggaggggagtgtatattttaacataagagga-gatgggagtgtaattcaaacatctttgagaa 1364111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 23682084 - 23682013
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||||||| |||| |||||||    
T  23682084 attttatttttcaaggga-ggggagtgtatattttaacataagagg-ggagaggagtataactcaagcatcttt 23682013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 24054321 - 24054250
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||||||| |||| |||||||    
T  24054321 attttatttttcaaggga-ggggagtgtatattttaacataagagg-ggagaggagtataactcaagcatcttt 24054250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 291215 - 291158
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||| ||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  291215 gaggggtgtgtaaatttttcttttcaaggga-ggggagtgtatattttaacataagagg 291158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 30605316 - 30605400
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||||||||||| |||||| | |||| ||||||||||||||||||||| | |||  ||||| |||||||| |||||||    
T  30605316 gaggggagtgtagattttactattcaagag-agggaagtgtatattttaacataaga-gtggaggggagtgtaattcaaacatcttt 30605400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 40036366 - 40036423
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||| ||||||| |||||||||||||||||||||||||||    
T  40036366 gaggggagtataaattttactttgcaaggga-ggggagtgtatattttaacataagagg 40036423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 44950416 - 44950359
Alignment:
Q  126 agaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||| ||||||||||    
T  44950416 agaggggagtgtaaattttacttttaaaggg-aggggagtgtatatttcaacataagag 44950359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 47794640 - 47794709
Alignment:
Q  146 cttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||| ||||||||||    
T  47794640 cttttcaagggagggggaatgtatattttaacataagagga-gaggggagtgtaattcaaacatctttaag 47794709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 49765099 - 49765183
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || ||||||| |||||||||| ||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  49765099 gaggggagtataaattttacctttcaaggga-ggggaatgtatattttaacataagagg-ggaggggagtgtaattcaaacatcttt 49765183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 54403665 - 54403581
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| ||  ||||||||||||||||| ||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  54403665 gaggggagtataacttttacttttcaaggga-gggaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 54403581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 18364723 - 18364652
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  18364723 attttatttttcaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 18364652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 17764934 - 17764989
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||| || || ||||||||||||||| |||||||||||||||||||||||||||    
T  17764934 ggggagtataaatcttacttttcaaggga-ggggagtgtatattttaacataagagg 17764989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 19066254 - 19066309
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||| || || ||||||||||||||| |||||||||||||||||||||||||||    
T  19066254 ggggagtataaatcttacttttcaaggga-ggggagtgtatattttaacataagagg 19066309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 23309574 - 23309506
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||||| ||| | ||||||| ||||||| | ||||||||||||||||||||    
T  23309574 ctaagagaagcttgaattacattcctctcccctcttatgttaaaatctacactttactccctcaatatt 23309506  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 32222067 - 32222136
Alignment:
Q  134 gtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 205  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||||||| | |||| ||||| ||||||||    
T  32222067 gtgtagattttacttttcaa-ggaaggtaagtgtatattttaacataagaag-ggaagggagtgtaattcaa 32222136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 41587300 - 41587357
Alignment:
Q  146 cttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 205  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  41587300 cttttcaaggga-ggggagtgtatattttaacataagagg-ggagaggagtgtaattcaa 41587357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 53490703 - 53490757
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    ||||||| || || ||||||||||||||| ||||||||||||||||||||||||||    
T  53490703 ggggagtataaatcttacttttcaaggga-ggggagtgtatattttaacataagag 53490757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 1262499 - 1262419
Alignment:
Q  131 ggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||| || ||||||||||||||| || || |||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  1262499 ggagtataaattttacttttcaagaga-ggagagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 1262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 2756604 - 2756661
Alignment:
Q  155 ggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  2756604 ggaaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 2756661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 41586767 - 41586833
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatat 116  Q
    ||||| || |||||||||||||||||| | ||||||| ||||||| | |||||||||| ||||||||    
T  41586767 taagagaagcttgaattacattcatctcccctcttatgttaaaatctacactttactcactcaatat 41586833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 3090401 - 3090445
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  3090401 attttccttttcaaggga-ggggagtgtatattttaacataagagg 3090445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 11345330 - 11345413
Alignment:
Q  128 aggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||| ||  |||| |||| ||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  11345330 aggggagtataagttttcctttacaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 11345413  T

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Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 25480633 - 25480546
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    |||||| || || |||||||||| ||||||| ||  ||||||||||||||||||||| | |||  |||||||||||||| ||||||||||    
T  25480633 gaggggtgtataaattttactttacaaggga-ggaaagtgtatattttaacataagatg-ggaggggagtataattcaagcatctttaag 25480546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 44500026 - 44500097
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  44500026 attttacttttcaagaga-gggaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 44500097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 45241798 - 45241733
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaat 114  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| |||||||||||||||||||    
T  45241798 ctaagagaagcttgaattacattcccctcccctcttatgttaaaatctgcactttactccctcaat 45241733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 4757117 - 4757185
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||||||    
T  4757117 ctaagagaagcttgaattacattctcctccactcttatgttaaaatctacactttactccctcaatatt 4757185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 11055913 - 11055981
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||||||    
T  11055913 ctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaatatt 11055981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 18365276 - 18365335
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  18365276 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 18365335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 33314199 - 33314259
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| |||||||||||| | ||||||| ||||||| | ||||||||||||| ||||||||    
T  33314199 cttgatttacattcatctcccctcttatcttaaaatctacactttactcccttaatatttt 33314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 4558113 - 4558051
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| ||||||||||    
T  4558113 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatctttaag 4558051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 11581917 - 11581855
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    |||| |||||||||||||||||||||||||||| ||| || | | |||||||| ||||||||||    
T  11581917 aggggaggggagtgtatattttaacataagagg-ggagagaaatgtaattcaaacatctttaag 11581855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 19538313 - 19538250
Alignment:
Q  56 aaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||||||||||   |||  ||||||||||||||||  |||||||||| ||||||||||    
T  19538313 aaacttgaattacattctctttccttcttatattaaaatttatactttactccttcaatatttt 19538250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 27394358 - 27394300
Alignment:
Q  126 agaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||| |||| || ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  27394358 agaggagagtataaattttactttttaaggga-ggggaatgtatattttaacataagagg 27394300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 1363504 - 1363574
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||| || |||||||||||||||||| |  |||||| ||||||| | ||||||||||||  ||||||||    
T  1363504 ctaagagaagcttgaattacattcatctccattcttatgttaaaatctacactttactcccctaatatttt 1363574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 11397689 - 11397636
Alignment:
Q  131 ggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||| || |||||||||||||||||| | | |||||||||||||||||||||||    
T  11397689 ggagtataaattttacttttcaagggatgag-agtgtatattttaacataagagg 11397636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 11581989 - 11582055
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaata 115  Q
    |||||| || ||||||||||||||  || ||||||||| ||||||| | ||||||||||| ||||||    
T  11581989 ctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacactttactccttcaata 11582055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 40974668 - 40974725
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||| || |||| || |||||||||||||||||||||||||||    
T  40974668 gaggggagtataaattttacattgcaagtga-ggggagtgtatattttaacataagagg 40974725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 45851803 - 45851849
Alignment:
Q  48 tctaagaaaaacttgaattacattcatcttctctcttatattaaaat 94  Q
    ||||||| || ||||||||||||||||||| |||||||| |||||||    
T  45851803 tctaagagaagcttgaattacattcatcttttctcttatgttaaaat 45851849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 48841993 - 48842079
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    ||||||| | || ||||||||||| |||||| ||  ||||||||||||||||||| |||  ||  ||||| |||||||||||||||||||    
T  48841993 gaggggaatataaattttactttttaagggatggt-agtgtatattttaacataaaagg--gaggggagtgtaattcaatcatctttaag 48842079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 54605847 - 54605787
Alignment:
Q  148 tttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatc 210  Q
    |||||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| ||||    
T  54605847 tttcaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatc 54605787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 54606419 - 54606453
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggag 187  Q
    |||| ||||||||||||||||||||||||||||||    
T  54606419 aggggaggggagtgtatattttaacataagaggag 54606453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 3541054 - 3541110
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    ||||| ||| || ||||||||||||| |||| ||||| ||||||||||||||||||||    
T  3541054 gagggtagtataaattttacttttcatggga-ggggaatgtatattttaacataagag 3541110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 13623268 - 13623224
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||||    
T  13623268 attttaattttcaaggga-gggaagtgtatattttaacataagagg 13623224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 27395028 - 27394959
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| || ||||||||||||||  || |  |||||| ||||||| | ||||||||||||||||||||||    
T  27395028 taagagaagcttgaattacattcccctcccttcttatgttaaaatctacactttactccctcaatatttt 27394959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 30127698 - 30127642
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    ||||||||| || ||||||||||| |||||| ||| ||||||||||| ||||||||||    
T  30127698 gaggggagtataaattttactttttaagggatggg-agtgtatatttaaacataagag 30127642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 48223663 - 48223611
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    |||||| ||||||||||||||| ||||| | | |||||||||||||||||||||    
T  48223663 gggagtatagattttacttttcgaggga-gagaagtgtatattttaacataaga 48223611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 54404184 - 54404115
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| || ||||||||||| ||  || | ||||||| ||||||| | ||||||||||||||||||||||    
T  54404184 taagagaagcttgaattacactcccctcccctcttatgttaaaatctacactttactccctcaatatttt 54404115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 3089831 - 3089799
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  3089831 aggggaggggagtgtatattttaacataagagg 3089799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 4558154 - 4558222
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  4558154 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 4558222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 5963138 - 5963106
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  5963138 aggggaggggagtgtatattttaacataagagg 5963106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 6296715 - 6296770
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    ||||||||| || ||||||||||| ||||| || |||||||| ||||||||||||||    
T  6296715 gaggggagtataaattttacttttgaaggg-agaggagtgtagattttaacataaga 6296770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 7724673 - 7724591
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatct 211  Q
    ||||| ||| || |||||| ||||||||||| ||  ||| | ||||||||||||||||| |||| |||||||||||||| |||||    
T  7724673 gagggaagtataaattttatttttcaaggga-ggaaagtatttattttaacataagagg-ggaatggagtataattcaagcatct 7724591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 9830366 - 9830323
Alignment:
Q  141 ttttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||    
T  9830366 ttttatttttcaaggga-ggggagtgtatattttaacttaagagg 9830323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 10887791 - 10887732
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  10887791 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 10887732  T

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Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 10887832 - 10887900
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  10887832 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 10887900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 14602064 - 14601996
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  14602064 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 14601996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 19546974 - 19546914
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||||||  ||   ||||||| ||||||| | ||||||||||||||||||||||    
T  19546974 cttgaattacattctcctcacctcttatgttaaaatctacactttactccctcaatatttt 19546914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 22129809 - 22129877
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  22129809 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 22129877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 22524240 - 22524308
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  22524240 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 22524308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 24542935 - 24542867
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  24542935 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 24542867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 32737125 - 32737057
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| || || | ||||||| ||||||| | || |||||||||||||||||    
T  32737125 ctaagagaagcttgaattacatccacctcccctcttatgttaaaatctacattttactccctcaatatt 32737057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 37183159 - 37183100
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  37183159 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaaacatcttt 37183100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 40927574 - 40927542
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  40927574 aggggaggggagtgtatattttaacataagagg 40927542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 48224081 - 48224021
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||||||  || | ||||||| ||||||| | | ||||||||||||||||||||    
T  48224081 cttgaattacattcccctcccctcttatgttaaaatctactctttactccctcaatatttt 48224021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 49080604 - 49080636
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  49080604 aggggaggggagtgtatattttaacataagagg 49080636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 53490129 - 53490071
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||| |||||||||||||||||||||| |||| | ||| |||||||| |||||||    
T  53490129 agggaagggg-gtgtatattttaacataagagg-ggaatgaagtgtaattcaagcatcttt 53490071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 18406633 - 18406547
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    |||||||||||| |||||| ||||||||||| ||| ||||||||||||||||||||| |||||  ||||| |||||||| |||||||||    
T  18406633 gaggggagtgtaaattttatttttcaaggga-gggtagtgtatattttaacataaga-gaggaggggagtgtaattcaagcatctttaa 18406547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 16536460 - 16536391
Alignment:
Q  142 tttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  16536460 tttacttttcaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 16536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 44648722 - 44648664
Alignment:
Q  128 aggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggag 187  Q
    |||||||||||||||||||||| |||||| |||  |||||||||||||||||||||||||    
T  44648722 aggggagtgtagattttactttacaaggg-aggaaagtgtatattttaacataagaggag 44648664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 27225779 - 27225722
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||||||||||||    
T  27225779 gaggggagtataaattttacttttcaaggga-gggaagtgtatattttaacataagagg 27225722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 28045100 - 28045030
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||| || ||||||||||||||  || | ||||||||||||||| | ||||||||||||||||||||||    
T  28045100 ctaagagaagcttgaattacattctcctcccctcttatattaaaatctacactttactccctcaatatttt 28045030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 45559739 - 45559819
Alignment:
Q  131 ggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||| || |||||||||||||||| ||||||| |||||||||||||||||||||| ||  ||||| |||||||| |||||||    
T  45559739 ggagtataaattttacttttcaagg-aaggggattgtatattttaacataagagga-gatgggagtgtaattcaagcatcttt 45559819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 45737408 - 45737324
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || |||||| ||||||||||| || |||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  45737408 gaggggagtataaattttatttttcaaggga-ggagagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 45737324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 44645363 - 44645280
Alignment:
Q  128 aggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||||||||||||| |||||| |||  ||||||||||||||||||||| |||||   |||| |||||||| |||||||    
T  44645363 aggggagtgtagattttactttacaaggg-aggaaagtgtatattttaacataaga-gaggatgagagtgtaattcaaacatcttt 44645280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 17109395 - 17109352
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  17109395 attttacttttcaaggga-ggggagtgtatattttaacataagag 17109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 8061104 - 8061042
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    ||||||||||||||||||||||||||||||| |||||   |||| |||||||| ||||||||||    
T  8061104 agggaaggggagtgtatattttaacataaga-gaggaggagagtgtaattcaagcatctttaag 8061042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 19071814 - 19071758
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||||| ||||  ||||||||||||||||||||||||||    
T  19071814 gaggggagtataaattttacttttcacggga--gggagtgtatattttaacataagagg 19071758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 19119704 - 19119648
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||||| ||||  ||||||||||||||||||||||||||    
T  19119704 gaggggagtataaattttacttttcacggga--gggagtgtatattttaacataagagg 19119648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 31765424 - 31765351
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 217  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||   ||||||||||| |||||||  |||||||||||    
T  31765424 attttatttttcaaggga-ggggagtgtatatttgaacataag---aggaaaggagtgtaattcatgcatctttaaga 31765351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 1386601 - 1386531
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||| |||||||||||| |  || ||||||||| ||||||| | || |||||||||||||||||||    
T  1386601 ctaagaaaagcttgaattacatccccctcctctcttatgttaaaatctacattttactccctcaatatttt 1386531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 10012422 - 10012479
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||| ||||||||| ||| |||||||||||||||||||||||    
T  10012422 gaggggagtataaattttactgttcaaggga-gggaagtgtatattttaacataagagg 10012479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 36604830 - 36604746
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| || |||||||||||||| ||| ||| ||||||||||||||||||||||| | | |||||| |||||||| |||||||    
T  36604830 gaggagagtataaattttacttttcaaagga-gggaagtgtatattttaacataagagg-gaagaggagtgtaattcaagcatcttt 36604746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 42831175 - 42831228
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    |||| |||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  42831175 gggaatgtaaattttacttttcaaagga-ggggagtgtatattttaacataagag 42831228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 45738103 - 45738046
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||| |||||| ||| |||||||||||||||||||||||    
T  45738103 gaggggagtataaattttactttttaaggga-gggaagtgtatattttaacataagagg 45738046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 28044569 - 28044498
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||| ||||| |||| |||||||||||||||||||| | || ||| |||||||||||||| |||||||    
T  28044569 attttactttacaagg-aaggagagtgtatattttaacataa-aagacgaagggagtataattcaagcatcttt 28044498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 831893 - 831829
Alignment:
Q  44 ctcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactcc 108  Q
    |||| |||||| || |||||||||||||| ||||| ||||||| ||||||||| || ||||||||    
T  831893 ctctcctaagagaagcttgaattacattcttcttccctcttatgttaaaatttacattttactcc 831829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 25068961 - 25068893
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||||||    
T  25068961 ctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaatatt 25068893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 38011808 - 38011740
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||||||    
T  38011808 ctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaatatt 38011740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 45738666 - 45738725
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| ||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  45738666 aggggagggaagtgtatattttaacataagagg-ggagaggagtgtaattcaagcatcttt 45738725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 1116540 - 1116453
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagt---gtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||||||||||||||||||||  | |||||   |||||||||||||||| ||| |||  ||||| |||||||| |||||||    
T  1116540 gaggggagtgtagattttacttttcaaggg-tgtggagtgtagtatattttaacataaaagg-ggaggggagtgtaattcaagcatcttt 1116453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 1117035 - 1116992
Alignment:
Q  77 tctctcttatattaaaatttgcactttactccctcaatatttta 120  Q
    |||||||||||||||||| | ||||||||||||| |||||||||    
T  1117035 tctctcttatattaaaatctacactttactcccttaatatttta 1116992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 4667526 - 4667572
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggag 187  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||    
T  4667526 attttacttttcaaggga-gaagagtgtatattttaacataagaggag 4667572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 28198094 - 28198167
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataatt 202  Q
    ||||||||| || |||||| ||||||||||| || |||||||||||| ||||||||||| |||  |||||||||||    
T  28198094 gaggggagtataaattttatttttcaaggga-ggagagtgtatatttaaacataagagg-ggaggggagtataatt 28198167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 43320561 - 43320634
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    ||||||||||||||||| |||| ||| ||||||||||||||| ||| |||  ||||| |||||||| |||||||||    
T  43320561 attttacttttcaaggg-agggaagtctatattttaacataaaagg-ggaggggagtgtaattcaagcatctttaa 43320634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 187
Target Start/End: Complemental strand, 46682750 - 46682719
Alignment:
Q  156 gaaggggagtgtatattttaacataagaggag 187  Q
    ||||||||||||||||||||||||||||||||    
T  46682750 gaaggggagtgtatattttaacataagaggag 46682719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 13574117 - 13574047
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||  ||||| ||||||   || ||||||||| ||||||| | ||||||||||||||||||||||    
T  13574117 ctaagaaaagtttgaaatacatttccctcctctcttatgttaaaatatacactttactccctcaatatttt 13574047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 20585105 - 20585171
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatat 116  Q
    ||||| || ||||||||||||||  || | ||||||| ||||||| | |||||||||||||||||||    
T  20585105 taagagaagcttgaattacattctcctcccctcttatgttaaaatctacactttactccctcaatat 20585171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 29510474 - 29510535
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    |||| |||||||||||||||||||||||||||| | |  ||||| |||||||| |||||||||    
T  29510474 aggggaggggagtgtatattttaacataagagg-gaaggggagtgtaattcaaacatctttaa 29510535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 45195192 - 45195126
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatat 116  Q
    ||||| || ||||||||||||||  || | ||||||| ||||||| | |||||||||||||||||||    
T  45195192 taagagaagcttgaattacattctcctcccctcttatgttaaaatctacactttactccctcaatat 45195126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 28970921 - 28970877
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||    
T  28970921 attttacttttcaaggga-ggagagtgtatattttaacataggagg 28970877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 33126827 - 33126879
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    |||||| || |||||||||||||||||| ||  |||||||||||||||||||||    
T  33126827 gggagtataaattttacttttcaaggga-ggaaagtgtatattttaacataaga 33126879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 45195233 - 45195266
Alignment:
Q  152 aagggaaggggagtgtatattttaacataagagg 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  45195233 aaggggaggggagtgtatattttaacataagagg 45195266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 2275190 - 2275135
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||| || || |||||||| |||||| | |||||||||||||||||||||||||    
T  2275190 ggggagtataaatcttactttttaaggga-gaggagtgtatattttaacataagagg 2275135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 15357047 - 15357123
Alignment:
Q  43 tctcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| |||||| || ||||||||||||||  || |  |||||| ||||||| | ||||||||||||||||| ||||    
T  15357047 tctctcctaagagaagcttgaattacattcccctcccgtcttatgttaaaatctacactttactccctcaatttttt 15357123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 16536965 - 16536905
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||||||  || | ||||||| ||||||| | | ||||||||||||||||||||    
T  16536965 cttgaattacattcccctcccctcttatgttaaaatctactctttactccctcaatatttt 16536905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 19072354 - 19072413
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| ||||||||||||||||||| |||||| |||||  ||||| |||||||| |||||||    
T  19072354 aggggaggggagtgtatattttaatataaga-gaggaggggagtgtaattcaaacatcttt 19072413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 19120244 - 19120303
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| ||||||||||||||||||| |||||| |||||  ||||| |||||||| |||||||    
T  19120244 aggggaggggagtgtatattttaatataaga-gaggaggggagtgtaattcaaacatcttt 19120303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 25087404 - 25087357
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatatttta 175  Q
    ||||||||| |||||||||||||||||||| |||  |||||||||||||    
T  25087404 gaggggagtatagattttacttttcaaggg-aggttagtgtatatttta 25087357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 27226270 - 27226210
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||| ||||||| || | ||||||| ||||||| | ||||||||| ||||||||||||    
T  27226270 cttgaatgacattcacctcccctcttatgttaaaatctacactttacttcctcaatatttt 27226210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 31765957 - 31765890
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||| | | || ||||||| ||||||| | ||||||||||||||||||||    
T  31765957 ctaagagaagcttgaattacatt-accctccctcttatgttaaaatctacactttactccctcaatatt 31765890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 41575252 - 41575193
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| ||||||||| |||||||||||||||||| | | |||||| |||||||| |||||||    
T  41575252 aggggaggggagtgcatattttaacataagagg-gaagaggagtgtaattcaagcatcttt 41575193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 47233159 - 47233108
Alignment:
Q  131 ggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    ||||| || ||||| |||||||||| ||||||| |||||||||||||||||||    
T  47233159 ggagtataaattttgcttttcaagg-aaggggaatgtatattttaacataaga 47233108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 50143468 - 50143406
Alignment:
Q  147 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatct 211  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||    
T  50143468 ttttcaaggga-ggggaatgtatattttaacataagagg-ggaggggagtgtaattcaaacatct 50143406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 52505413 - 52505481
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  52505413 ctaagagaagcttgaattacatcccactcccctcttatgttaaaatctacactttactccctcaatatt 52505481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 11390 - 11336
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  11390 gggagtgtaaattttacttttcaaggga-ggggagtgtatattttaacataagagg 11336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 59364 - 59307
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||    
T  59364 gaggggagtataaattttacttttcaaggga-ggggagtgtatattttaacataagagg 59307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 31221426 - 31221510
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||| | |||||||||||||||||| ||||||||||||||||||||||||| | |||  ||||| |||||||| |||||||    
T  31221426 gaggggagtgaaaattttacttttcaaggga-ggggagtgtatattttaacataagaag-ggaggggagtgtaattcaagcatcttt 31221510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 38987856 - 38987772
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||| ||||||||||||||| || | ||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  38987856 gaggggagtgtaaattttacttttcaagaga-gtggagtgtatattttaacataagagg-ggaggggagtttaattcaagcatcttt 38987772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 40401522 - 40401606
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| || |||||||||||||||||||||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  40401522 gaggagagtataaattttacttttcaagggaaggg-agtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 40401606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 48872115 - 48872059
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||    
T  48872115 gaggggagtataaattttacttttcaaggga-ggggagtgtatattttaacataagag 48872059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 16425980 - 16426050
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtata 199  Q
    ||||||||| || || ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  16425980 gaggggagtataaatattacttttcaaggga-ggggagtgtatattttaacataagagg-ggaagggagtata 16426050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 28308641 - 28308700
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggag 187  Q
    ||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  28308641 gaggggagtatacattttaattttcaaggga-ggggagtgtatattttaacataagaggag 28308700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 3391861 - 3391804
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||| |||||| |||||||||||||||||||||||||||    
T  3391861 gaggggagtataaattttactttttaaggga-ggggagtgtatattttaacataagagg 3391804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 11639998 - 11639916
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||| || |||||||||||||| ||| || |||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  11639998 ggggagtataaattttacttttcaaagga-ggagagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 11639916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 23742604 - 23742544
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||||||| ||| | |||||||| |||||| | ||||||||||||||||||||||    
T  23742604 cttgaattacattcttctcccctcttataataaaatctacactttactccctcaatatttt 23742544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 32867857 - 32867789
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||||  || ||||||||| ||||||| | ||||||||||||||||||||    
T  32867857 ctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacactttactccctcaatatt 32867789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 32867898 - 32867957
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  32867898 aggggaggggagtgtatattttaacataagagg-ggagaggagtgtaattcaagcatcttt 32867957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 20261567 - 20261609
Alignment:
Q  142 tttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  20261567 tttacttttcaaggga-ggggagtgtatattttaacataagagg 20261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 1573205 - 1573275
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||||||||    
T  1573205 ctaagagaagcttgaattacattccactcccctcttatgttaaaatctacactttactccctcaatatttt 1573275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 5227956 - 5227899
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  5227956 gaggggagtataaattttactttttaaggga-ggggaatgtatattttaacataagagg 5227899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 19333021 - 19333105
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || |||||||||||||| | |||| |||||||||||||||| ||| | ||||| |||||| |||||||| |||||||    
T  19333021 gaggggagtataaattttacttttcaa-gaaaggagagtgtatattttaacttaa-aagaggagaggagtgtaattcaagcatcttt 19333105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 22711738 - 22711681
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||||||| || | |||||||||||||||||||||||||    
T  22711738 gaggggagtataaattttacttttcaagaga-gtggagtgtatattttaacataagagg 22711681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 46011090 - 46011174
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || ||||| |||||||||||| |||||||| |||||||||||||||| ||| |  ||||| |||||||| |||||||    
T  46011090 gaggggagtataaattttccttttcaaggga-ggggagtgcatattttaacataaga-gagaaggggagtgtaattcaagcatcttt 46011174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 12677190 - 12677146
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||    
T  12677190 attttacttttcatggga-ggggagtgtatattttaacataagagg 12677146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 23232968 - 23232912
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    ||||||||| || |||||||||||||||| ||||||| |||||||||||||| |||||    
T  23232968 gaggggagtataaattttacttttcaagg-aaggggaatgtatattttaacacaagag 23232912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 30870007 - 30869955
Alignment:
Q  132 gagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||| ||||||||||| ||  |||||||||||||||||||||||    
T  30870007 gagtgtagattttaattttcaaggga-ggaaagtgtatattttaacataagagg 30869955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 36688830 - 36688917
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    ||||||||| ||  ||||||||||||||||| ||  ||||||||||||||||||||||| |||  ||||| ||||||||  |||||||||    
T  36688830 gaggggagtataacttttacttttcaaggga-ggaaagtgtatattttaacataagagg-ggaggggagtgtaattcaaagatctttaag 36688917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 36848468 - 36848555
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    ||||| ||| || ||||||||||| |||||| ||  |||||||||||||||||||||||| || | |||| |||||||| ||||||||||    
T  36848468 gagggaagtataaattttacttttaaaggga-ggaaagtgtatattttaacataagagga-gagaagagtgtaattcaagcatctttaag 36848555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 14078435 - 14078376
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||||| ||||  |||| |||||||| |||||||    
T  14078435 aggggaggggagtgtatattttaacataagagg-ggaagagagtttaattcaagcatcttt 14078376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 14388463 - 14388404
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||||| ||||  |||| |||||||| |||||||    
T  14388463 aggggaggggagtgtatattttaacataagagg-ggaagagagtttaattcaagcatcttt 14388404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 46208817 - 46208757
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||| |||||||||||||||| ||||||| | ||||| ||  ||||||||||||    
T  46208817 cttgaattacactcatcttctctcttatgttaaaatctacacttcacatcctcaatatttt 46208757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 25607607 - 25607669
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| ||||||||||    
T  25607607 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaaacatctttaag 25607669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 27619619 - 27619688
Alignment:
Q  142 tttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| |||||| | ||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  27619619 tttactttttaaggga-gaggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 27619688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 2935766 - 2935815
Alignment:
Q  163 agtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||||||||||||| |||| ||||| |||||||| |||||||    
T  2935766 agtgtatattttaacataagagg-ggaagggagtgtaattcaagcatcttt 2935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 3340905 - 3340963
Alignment:
Q  61 tgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||||  || | ||||||| ||||||| | ||||||||||||||||||||||    
T  3340905 tgaattacattcccctcccctcttatgttaaaatctacactttactccctcaatatttt 3340963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 29736752 - 29736678
Alignment:
Q  45 tcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||| || ||||||||||||||   | | ||||||| ||||||| | ||||||| ||||||||||||||    
T  29736752 tcttctaagagaagcttgaattacattctcatcccctcttatgttaaaatctacactttagtccctcaatatttt 29736678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 32387580 - 32387527
Alignment:
Q  131 ggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||| || |||||||||||||||||| ||  |||||||||||||||||||||||    
T  32387580 ggagtataaattttacttttcaagggatgga-agtgtatattttaacataagagg 32387527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 33869272 - 33869238
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggag 187  Q
    |||| ||||||||||||||||||||||||||||||    
T  33869272 aggggaggggagtgtatattttaacataagaggag 33869238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 42813126 - 42813069
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||||||| ||| || | ||||||||||||||||||||||    
T  42813126 gaggggagtataaattttacttttcaacgga-ggagtgtgtatattttaacataagagg 42813069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 25407 - 25444
Alignment:
Q  80 ctcttatattaaaatttgcactttactccctcaatatt 117  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  25407 ctcttatattaaaatctacactttactccctcaatatt 25444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 2790171 - 2790100
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  2790171 attttatttttcaaggga-ggggaatgtatattttaacttaagagg-ggaggggagtgtaattcaaacatcttt 2790100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 5228592 - 5228523
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| || ||||||||||||||  || |  |||||| ||||||| | ||||||||||||||||||||||    
T  5228592 taagagaagcttgaattacattctcctcccttcttatgttaaaatctacactttactccctcaatatttt 5228523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 12679085 - 12679041
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||    
T  12679085 attttacttttcatggga-ggggaatgtatattttaacataagagg 12679041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 23226441 - 23226393
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaa 176  Q
    ||||||||| || ||||||||||||||||| || ||||||||||||||||    
T  23226441 gaggggagtataaattttacttttcaaggg-agcggagtgtatattttaa 23226393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 23233444 - 23233375
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| ||||||||||||||||||  | | ||||||| ||||||| |  | |||||||||||||||||||    
T  23233444 taagagaaacttgaattacattcacatcccctcttatgttaaaatctatattttactccctcaatatttt 23233375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 23235594 - 23235546
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaa 176  Q
    ||||||||| || ||||||||||||||||| || ||||||||||||||||    
T  23235594 gaggggagtataaattttacttttcaaggg-agcggagtgtatattttaa 23235546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 23243105 - 23243036
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| ||||||||||||||||||  | | ||||||| ||||||| |  | |||||||||||||||||||    
T  23243105 taagagaaacttgaattacattcacatcccctcttatgttaaaatctatattttactccctcaatatttt 23243036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 26200461 - 26200534
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaa-aggagtataattcaatcatctttaa 215  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||  ||||| || ||| |||||||| |||||||||    
T  26200461 attttacttttcaaggg-aggggaatgtatattataacataaga--aggaagagaagtgtaattcaaacatctttaa 26200534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 29615607 - 29615563
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  29615607 attttactttttaaggga-ggggaatgtatattttaacataagagg 29615563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 33576662 - 33576718
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    |||| |||| || ||||||||||||||  || ||||||||||||||||||||||||||    
T  33576662 gaggagagtataaattttacttttcaaaaga-ggggagtgtatattttaacataagag 33576718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 36687369 - 36687313
Alignment:
Q  159 ggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    ||||||||||||||||||||||||||| |||  | ||| |||||||| ||||||||||    
T  36687369 ggggagtgtatattttaacataagagg-ggagggaagtgtaattcaagcatctttaag 36687313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 25335 - 25276
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  25335 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 25276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 317357 - 317298
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  317357 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 317298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 317398 - 317466
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||||   || | ||||||| ||||||| | ||||||||||||||||||||    
T  317398 ctaagagaagcttgaattacatttccctcccctcttatgttaaaatctacactttactccctcaatatt 317466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 2146156 - 2146224
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||| ||||||||    
T  2146156 ctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccttcaatatt 2146224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 2146922 - 2146862
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||| ||  |||| ||||||  ||||||| | ||||||||||||||||||||||    
T  2146922 cttgaattacactccccttccctcttaagttaaaatatacactttactccctcaatatttt 2146862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 3341411 - 3341470
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggag 187  Q
    ||||||||| || |||||| |||| |||||| |  ||||||||||||||||||||||||||    
T  3341411 gaggggagtataaattttattttttaaggga-gatgagtgtatattttaacataagaggag 3341470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 14078490 - 14078542
Alignment:
Q  63 aattacattcatcttctctcttatattaaaatttgcactttactccctcaata 115  Q
    |||| ||||| ||| ||||||||| ||||||| | ||||||||||||||||||    
T  14078490 aattgcattcctctcctctcttatgttaaaatctacactttactccctcaata 14078542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 14388518 - 14388570
Alignment:
Q  63 aattacattcatcttctctcttatattaaaatttgcactttactccctcaata 115  Q
    |||| ||||| ||| ||||||||| ||||||| | ||||||||||||||||||    
T  14388518 aattgcattcctctcctctcttatgttaaaatctacactttactccctcaata 14388570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 187
Target Start/End: Original strand, 14753878 - 14753906
Alignment:
Q  159 ggggagtgtatattttaacataagaggag 187  Q
    |||||||||||||||||||||||||||||    
T  14753878 ggggagtgtatattttaacataagaggag 14753906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 19156071 - 19156130
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| ||||||||||||||||||||||| ||| | |||| |||||||| |||||||    
T  19156071 aggggagggaagtgtatattttaacataagagg-ggagatgagtgtaattcaaacatcttt 19156130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 20755470 - 20755529
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| ||||||||||||||||||||||| ||| | |||| |||||||| |||||||    
T  20755470 aggggagggaagtgtatattttaacataagagg-ggagatgagtgtaattcaaacatcttt 20755529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 25607566 - 25607498
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| ||||||||||||||| |  ||   ||||||| ||||||| | ||||||||||||||||||||    
T  25607566 ctaagagaaacttgaattacatccccctctcctcttatgttaaaatctacactttactccctcaatatt 25607498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 27144260 - 27144228
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  27144260 aggggaggggagtgtatattttaacataagagg 27144228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 27144842 - 27144897
Alignment:
Q  159 ggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    ||||||||||||||||||||||||| || || | |||| |||||||| |||||||||    
T  27144842 ggggagtgtatattttaacataagaaga-gagaagagtgtaattcaagcatctttaa 27144897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 29823450 - 29823518
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  29823450 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 29823518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 31872586 - 31872646
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||||||||||| | ||||||| ||||||| | |  ||||||| |||||||||||    
T  31872586 cttgaattacattcatctcccctcttatgttaaaatctactatttactcactcaatatttt 31872646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 32388091 - 32388032
Alignment:
Q  60 ttgaattacattcatcttctc-tcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||||| ||||||| |||||| ||||||| | | ||||||||||||||||||||    
T  32388091 ttgaattacattc-tcttctcctcttatgttaaaatatacgctttactccctcaatatttt 32388032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 34999264 - 34999232
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  34999264 aggggaggggagtgtatattttaacataagagg 34999232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 36847911 - 36847879
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  36847911 aggggaggggagtgtatattttaacataagagg 36847879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 38670654 - 38670570
Alignment:
Q  33 atttcattcttctcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| ||| |||| |||||| ||  ||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  38670654 atttcactctcctctcctaagagaaggttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 38670570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 48982534 - 48982566
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  48982534 aggggaggggagtgtatattttaacataagagg 48982566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 21802575 - 21802632
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||    
T  21802575 gaggggagtataaattttacttttcaaggga-ggggagtgtatattttaacataagagg 21802632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 6936489 - 6936564
Alignment:
Q  44 ctcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||| |||||| || |||||||||||||| ||| | ||||||| ||||||||| || |||||||||||||||||||    
T  6936489 ctctcctaagagaagcttgaattacattcttctcccctcttatgttaaaatttacattttactccctcaatatttt 6936564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 31282216 - 31282274
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagga 186  Q
    ||||||||| || |||||||||||||||||| |||| |||||||||||||||||||||||    
T  31282216 gaggggagtataaattttacttttcaagggaggggg-gtgtatattttaacataagagga 31282274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 32114381 - 32114462
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||| || |||||||||||||||||| | |||||||||||||||||||||||||| || || ||| |||||||| |||||||    
T  32114381 gggagtatacattttacttttcaaggga-gaggagtgtatattttaacataagagga-gagagaagtgtaattcaagcatcttt 32114462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 14313295 - 14313211
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||| |||||| |||||||||| |||| ||||||||||||||||||| ||| ||| |||| | |||||||| |||||||    
T  14313295 gaggggagtgtaaattttatttttcaaggg-agggaagtgtatattttaacataaaagg-ggagaggaatgtaattcaagcatcttt 14313211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 14306890 - 14306838
Alignment:
Q  132 gagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||    
T  14306890 gagtgtaaattttacttttcaagg-aagggaagtgtatattttaacataagagg 14306838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 7448891 - 7448937
Alignment:
Q  158 aggggagtgtatattttaacataagaggaggaaaggagtataattcaa 205  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  7448891 aggggagtgtatattttaacataagagg-ggaaaggagtgtaattcaa 7448937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 15499469 - 15499523
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    ||||||| || || ||||||||||||||| ||||||||||||||||||||||||||    
T  15499469 ggggagtataaatcttacttttcaaggga-ggggagtgtatattttaacataagag 15499523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 17336943 - 17337010
Alignment:
Q  48 tctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaata 115  Q
    |||| |||||||||||||||||||| |||   ||||||| ||||||| | ||||||||||||||||||    
T  17336943 tctaggaaaaacttgaattacattcttctctcctcttatgttaaaatctacactttactccctcaata 17337010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 34794470 - 34794407
Alignment:
Q  56 aaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||||||||||||| | ||||||| ||||||| | | |||||||||||||| |||||    
T  34794470 aaacttgaattacattcatctcccctcttatgttaaaatctactctttactccctcaacatttt 34794407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 11794763 - 11794824
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    |||||||||||||||| |||||||||||||||| |||  ||||| |||||||| |||||||||    
T  11794763 agggaaggggagtgtaaattttaacataagagg-ggatgggagtgtaattcaaccatctttaa 11794824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 22268537 - 22268598
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttta 120  Q
    ||||||||||| ||  || | ||||||| ||||||||| |||||||||||||||||||||||    
T  22268537 cttgaattacactctcctcccctcttatgttaaaatttacactttactccctcaatatttta 22268598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 187796 - 187856
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||| ||| |||| ||||||  ||||||| | ||||||||||||||||||||||    
T  187796 cttgaattacactcaccttccctcttaagttaaaatatacactttactccctcaatatttt 187856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 12026193 - 12026252
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  12026193 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 12026252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 12693924 - 12693865
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| ||||||||||||||||||||||||||||| || || ||| |||||||| |||||||    
T  12693924 aggggaggggagtgtatattttaacataagagga-gagagaagtgtaattcaagcatcttt 12693865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 14873137 - 14873205
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||||||    
T  14873137 ctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaatatt 14873205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 22342187 - 22342144
Alignment:
Q  141 ttttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  22342187 ttttacttttcaaggga-gggaagtgtatattttaacataagagg 22342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 34709346 - 34709414
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| | ||| | ||||||| ||||||| | ||||||||||||||||||||    
T  34709346 ctaagagaagcttgaattacatccctctcccctcttatgttaaaatctacactttactccctcaatatt 34709414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 2522757 - 2522715
Alignment:
Q  142 tttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||| |||||||||||||||||| ||||||||    
T  2522757 tttacttttcaaggga-ggggagtgtatattttaatataagagg 2522715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 4101095 - 4101180
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    |||| |||| || |||||||||||||| ||| || |||||||||||||||||||||||| |||    ||| |||||||| ||||||||||    
T  4101095 gaggagagtataaattttacttttcaaagga-ggagagtgtatattttaacataagaggggga---tagtgtaattcaaacatctttaag 4101180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 17307302 - 17307252
Alignment:
Q  134 gtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||||||||||| |||| || || |||||||||||||||||||||||    
T  17307302 gtgtagattttactttttaaggaaaagg-agtgtatattttaacataagagg 17307252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 22342277 - 22342208
Alignment:
Q  141 ttttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctt 212  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| | ||| | |||| |||||||| ||||||    
T  22342277 ttttacttttcaaggga-gggaagtgtatattttaacataagaag-ggatatgagtgtaattcaagcatctt 22342208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 32521936 - 32521863
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 205  Q
    |||||| || |||||||||||||| ||||  | | ||||||||||||||||||||| |||||||||| ||||||||    
T  32521936 gggagtataaattttacttttcaaaggaaatgaa-tgtatattttaacataagagg-ggaaaggagtgtaattcaa 32521863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 34793960 - 34793906
Alignment:
Q  132 gagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggag 187  Q
    |||| ||||||||||||||||||| ||| | ||||||||||||||||||| |||||    
T  34793960 gagtatagattttacttttcaagg-aagagaagtgtatattttaacataaaaggag 34793906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 2092308 - 2092365
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || ||||||||||||||||| | || |||||||||||||| ||||||||    
T  2092308 gaggggagtataaattttacttttcaaggg-atggaagtgtatattttaatataagagg 2092365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 4126458 - 4126515
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||| |||| || |||||||||||||| ||| || ||||||||||||||||||||||||    
T  4126458 gaggagagtataaattttacttttcaaagga-ggagagtgtatattttaacataagagg 4126515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 10702925 - 10702989
Alignment:
Q  147 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||| ||| ||||||||||||||||||||||| ||| || ||| |||||||| |||||||    
T  10702925 ttttcaaggga-gggaagtgtatattttaacataagagg-ggagagaagtgtaattcaagcatcttt 10702989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 12767055 - 12767125
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||||| ||||||||||| || |||||||    
T  12767055 ctaagagaagcttgaattacattctcctcccctcttatgttaaaatttacactttactccttcgatatttt 12767125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 12767577 - 12767634
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||| |||| || |||||| ||||||||||| ||| |||||||||||||||||||||||    
T  12767577 gaggagagtataaattttatttttcaaggga-gggaagtgtatattttaacataagagg 12767634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 21847340 - 21847397
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||| ||| ||| ||| |||||||||||||||||||||||    
T  21847340 gaggggagtataaattttactttgcaaagga-gggaagtgtatattttaacataagagg 21847397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 32522499 - 32522560
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    ||||||||| ||||||||||||||||||||| || || | |||| |||||||| |||||||||    
T  32522499 agggaagggaagtgtatattttaacataaga-gatgagatgagtgtaattcaaacatctttaa 32522560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 188434 - 188490
Alignment:
Q  158 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||||    
T  188434 aggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatctttaa 188490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 3767702 - 3767633
Alignment:
Q  48 tctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    ||||||| ||||||||||||||| |  || | ||||||| ||||||| | ||||||||||||| ||||||    
T  3767702 tctaagagaaacttgaattacatccccctcccctcttatgttaaaatctacactttactcccttaatatt 3767633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 4100640 - 4100709
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| || ||||||||||||||  || | ||||||| ||||||| | |||||||||||||| |||||||    
T  4100640 taagagaagcttgaattacattctcctcccctcttatgttaaaatctacactttactccctccatatttt 4100709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 4126002 - 4126071
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| || ||||||||||||||  || | ||||||| ||||||| | |||||||||||||| |||||||    
T  4126002 taagagaagcttgaattacattctcctcccctcttatgttaaaatctacactttactccctccatatttt 4126071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 6937888 - 6937932
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||    
T  6937888 attttacttttcaaggga-gtggagtgtatattttaacttaagagg 6937932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 188388 - 188320
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  188388 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 188320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 4100593 - 4100561
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  4100593 aggggaggggagtgtatattttaacataagagg 4100561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 4125955 - 4125923
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  4125955 aggggaggggagtgtatattttaacataagagg 4125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 7127612 - 7127544
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  7127612 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 7127544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 9240978 - 9241046
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  9240978 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 9241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 10702349 - 10702317
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  10702349 aggggaggggagtgtatattttaacataagagg 10702317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 11522878 - 11522819
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  11522878 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 11522819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 12025543 - 12025603
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||| ||  |||| ||||||  ||||||| | ||||||||||||||||||||||    
T  12025543 cttgaattacactccccttccctcttaagttaaaatatacactttactccctcaatatttt 12025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 12026152 - 12026084
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  12026152 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 12026084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 12033072 - 12033004
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  12033072 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 12033004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 12033113 - 12033172
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  12033113 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 12033172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 14313845 - 14313904
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  14313845 aggggaggggattgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 14313904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 25577156 - 25577088
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  25577156 ctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaatatt 25577088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 32113817 - 32113785
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  32113817 aggggaggggagtgtatattttaacataagagg 32113785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 32131014 - 32130982
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| |||||||||||||||||||||||    
T  32131014 agggaagggaagtgtatattttaacataagagg 32130982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 34794528 - 34794579
Alignment:
Q  163 agtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    ||||||||||||||||||||||| |||  ||||| |||||||| |||||||||    
T  34794528 agtgtatattttaacataagagg-ggaggggagtgtaattcaagcatctttaa 34794579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 8573319 - 8573376
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  8573319 gaggggagtgtaaattttacttttcaaagga-ggggagtgtatattttaacataagagg 8573376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 8007181 - 8007251
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||| || |||||||||||||| ||||| ||||||| ||||||| | ||||||| ||||||||||||||    
T  8007181 ctaagagaagcttgaattacattcctcttccctcttatgttaaaatctacactttaatccctcaatatttt 8007251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 14594173 - 14594116
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||||||||||||    
T  14594173 gaggggagtataaattttacttttcaaggga-gggaagtgtatattttaacataagagg 14594116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 17780450 - 17780366
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||| |||||||||||||  ||| || |||||||||||||||||||||| ||||| || ||| |||||||| |||||||    
T  17780450 gaggggagtgtaaattttacttttcagtgga-ggagagtgtatattttaacataaga-gaggagagtagtgtaattcaagcatcttt 17780366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 36742225 - 36742168
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||    
T  36742225 gaggggagtgtaaattttatttttcaaggga-gggtagtgtatattttaacataagagg 36742168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 6048104 - 6048173
Alignment:
Q  48 tctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    ||||||| || ||||||||||||| ||||  |||||||| |||||||||  |||||||||||||||||||    
T  6048104 tctaagagaagcttgaattacatttatctcttctcttatgttaaaatttatactttactccctcaatatt 6048173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 27979322 - 27979251
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  27979322 attttacttttcaaggga-ggggaatgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 27979251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 35751595 - 35751536
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||||| |||| ||||| |||||||| |||||||    
T  35751595 aggggaggggagtgtatattttaacataagagg-ggaagggagtgtaattcaagcatcttt 35751536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 36737432 - 36737506
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 216  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||||| |||  ||||| |||||||| ||||||||||    
T  36737432 attttatttttcaaggga-gggaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatctttaag 36737506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 3933949 - 3934006
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||| || |||||||||||||||| ||||| | |||||||||||||||||||||    
T  3933949 gaggggagtataaattttacttttcaagg-aagggaaatgtatattttaacataagagg 3934006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 20183984 - 20184068
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||| || |||||| ||||||||||| ||| |||||||||| |||||||||||| |||  ||||| |||||||| |||||||    
T  20183984 gaggggagtataaattttagttttcaaggga-gggaagtgtatattgtaacataagagg-ggaggggagtgtaattcaagcatcttt 20184068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 36762218 - 36762134
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||| | || |||||||||||||||||| ||| |||||||||||||| |||||||| |||  ||||| |||||||| |||||||    
T  36762218 gaggggaatataaattttacttttcaaggga-gggaagtgtatattttaaaataagagg-ggaggggagtgtaattcaagcatcttt 36762134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 141589 - 141645
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    ||||||||| || |||||||||||||| ||| ||||| ||||||||||||||||||||    
T  141589 gaggggagtataaattttacttttcaaagga-ggggattgtatattttaacataagag 141645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 10687692 - 10687636
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    |||||||||||| || |||||||||||||| |||| |||||||| |||||||||||||    
T  10687692 gaggggagtgtaaatgttacttttcaaggg-agggaagtgtataatttaacataagag 10687636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 12585711 - 12585655
Alignment:
Q  128 aggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||| || |||||||||||||||||| ||  |||||||||||||||||||||||    
T  12585711 aggggagtataaattttacttttcaaggga-ggaaagtgtatattttaacataagagg 12585655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 20259987 - 20260031
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||||||||||| | |||||||||||||||||||||||||    
T  20259987 attttacttttcaaggga-gaggagtgtatattttaacataagagg 20260031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 30782834 - 30782903
Alignment:
Q  50 taagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||| |||||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||| ||||    
T  30782834 taagagaaacttgaattacattctcctcccctcttatgttaaaatctacactttactccctcaatttttt 30782903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 1406206 - 1406265
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggag 187  Q
    ||||||||| || |||||| ||||||| ||| || ||||||||||||||||||||||||||    
T  1406206 gaggggagtataaattttatttttcaatgga-ggagagtgtatattttaacataagaggag 1406265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 4054846 - 4054914
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||||||    
T  4054846 ctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaatatt 4054914  T

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Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 9118906 - 9118851
Alignment:
Q  161 ggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 217  Q
    ||||||||||||||||| |||||| ||||| ||||| |||||||| |||||||||||    
T  9118906 ggagtgtatattttaacttaagag-aggaagggagtgtaattcaaacatctttaaga 9118851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 19408618 - 19408559
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  19408618 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 19408559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 19500870 - 19500815
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    ||||||||| || |||||||||| ||||||| | |||||||||||||||||||||||    
T  19500870 gaggggagtataaattttactttgcaaggga-gaggagtgtatattttaacataaga 19500815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 20183439 - 20183380
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||||||||||||||||||||| | |||  ||||| |||||||| |||||||    
T  20183439 agggaaggggagtgtatattttaacataagaag-ggaggggagtgtaattcaagcatcttt 20183380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 15144486 - 15144432
Alignment:
Q  158 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| ||||||||||||||||||||| || ||||||| |||||||||| |||||||    
T  15144486 agggaagtgtatattttaacataaga-gatgaaaggaatataattcaaacatcttt 15144432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 18523831 - 18523775
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||| |||||||||||||||||| ||||||  | | ||||||||||||||||||||||    
T  18523831 gagggaagtgtagattttactttttaaggga--gagggtgtatattttaacataagagg 18523775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 20570263 - 20570205
Alignment:
Q  126 agaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||||| |  |||||| ||||||||||| ||||| |||||||||||||||||||||    
T  20570263 agaggggagtattaattttatttttcaaggga-ggggaatgtatattttaacataagagg 20570205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 40957374 - 40957299
Alignment:
Q  44 ctcttctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||| |||||| || ||||||||||||||  || | |||||||| |||||| | ||||||||||| ||||||||||    
T  40957374 ctctcctaagagaagcttgaattacattctcctcccctcttataataaaatctacactttactccatcaatatttt 40957299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 20570207 - 20570150
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatct 211  Q
    |||| |||||||||||||||||||||||||| |||||  ||||| |||||||| |||||    
T  20570207 aggggaggggagtgtatattttaacataaga-gaggaggggagtgtaattcaagcatct 20570150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 35751074 - 35751020
Alignment:
Q  131 ggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggagg 188  Q
    |||||||||||||||||||||||   |||||||||  |||||||||||||||||||||    
T  35751074 ggagtgtagattttacttttcaaaa-aaggggagt--atattttaacataagaggagg 35751020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 38497950 - 38497912
Alignment:
Q  81 tcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  38497950 tcttatattaaaatatacactttactccctcaatatttt 38497912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 1931993 - 1932076
Alignment:
Q  128 aggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||| |||| |||||||||  | |  ||||| ||||||||||||||||| |||||  |||||||||||||| |||||||    
T  1931993 aggggagtgtaaatttaacttttcaaaag-ataggagtatatattttaacataaga-gaggaggggagtataattcaaacatcttt 1932076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 9118984 - 9119021
Alignment:
Q  80 ctcttatattaaaatttgcactttactccctcaatatt 117  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  9118984 ctcttatgttaaaatttacactttactccctcaatatt 9119021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 13279583 - 13279527
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    ||||||||| || ||||||||||||||||| ||| || |||| |||||||||||||||    
T  13279583 gaggggagtataaattttacttttcaaggg-aggagaatgtagattttaacataagag 13279527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 22730516 - 22730573
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatat 116  Q
    ||||||||||||||  || | ||||||| ||||||| | |||||||||||||||||||    
T  22730516 cttgaattacattctcctcccctcttatgttaaaatctacactttactccctcaatat 22730573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 38955534 - 38955620
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg---aggaaag-gagtataattcaatcatcttt 213  Q
    |||||| || ||||||||||||||||| || ||| ||||||||||||||||| |||    |||||| ||||||||||||| |||||||    
T  38955534 gggagtataaattttacttttcaaggg-agaggaatgtatattttaacataaaaggggagggaaagagagtataattcaaacatcttt 38955620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 1931409 - 1931465
Alignment:
Q  63 aattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||| ||| | ||||| | ||||||| | ||||||||||||||||||||||    
T  1931409 aattacattcctctcccctcttttgttaaaatctacactttactccctcaatatttt 1931465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 4877370 - 4877402
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  4877370 aggggaggggagtgtatattttaacataagagg 4877402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 8007697 - 8007783
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 215  Q
    ||||||||| || ||||| ||||||| |||| ||||||| |||||||||||| |||||||  | ||| || |||||||| |||||||||    
T  8007697 gaggggagtataaatttttcttttcagggga-ggggagtctatattttaacacaagagga-aagaggtgtttaattcaagcatctttaa 8007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 9017726 - 9017667
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  9017726 aggggagggaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 9017667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 12548477 - 12548441
Alignment:
Q  58 acttgaattacattcatcttctctcttatattaaaat 94  Q
    |||||||||||| |||||||||||||||| |||||||    
T  12548477 acttgaattacactcatcttctctcttatgttaaaat 12548441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 13280091 - 13280031
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||||||  || | ||||||| ||||||| | ||||||| ||||||||||||||    
T  13280091 cttgaattacattctcctcccctcttatgttaaaatctacactttaatccctcaatatttt 13280031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 13686070 - 13686015
Alignment:
Q  129 ggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||| || || ||||||||||||  |||| ||||||||||||||||||||||||    
T  13686070 ggggagtataaatcttacttttcaaga-aaggagagtgtatattttaacataagagg 13686015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 20691752 - 20691685
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || ||||||||||||||  || | ||||||| ||||||| | ||||||||||||||||||||    
T  20691752 ctaagagaagcttgaattacattcc-ctcccctcttatgttaaaatctacactttactccctcaatatt 20691685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 21639097 - 21639038
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| ||| |||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  21639097 aggggaggagagtgtatattttaacataagagg-ggagtggagtgtaattcaagcatcttt 21639038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 24625449 - 24625381
Alignment:
Q  49 ctaagaaaaacttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatt 117  Q
    |||||| || |||||||||||| |  || | ||||||| ||||||| | ||||||||||||||||||||    
T  24625449 ctaagagaagcttgaattacatcccactcccctcttatgttaaaatctacactttactccctcaatatt 24625381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 27028644 - 27028699
Alignment:
Q  161 ggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 217  Q
    ||||| ||||||||||||||||| |||||  ||||| |||||||| |||||||||||    
T  27028644 ggagtatatattttaacataaga-gaggaggggagtgtaattcaagcatctttaaga 27028699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 27979844 - 27979784
Alignment:
Q  59 cttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    ||||||||||||||  || | |||| || ||||||| | ||||||||||||||||||||||    
T  27979844 cttgaattacattcccctcccctctcatgttaaaatctacactttactccctcaatatttt 27979784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 36742577 - 36742609
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  36742577 aggggaggggagtgtatattttaacataagagg 36742609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 14693 - 14763
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtata 199  Q
    ||||||||| || || ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  14693 gaggggagtataaatattacttttcaaggga-ggggagtgtatattttaacataagagg-ggaagggagtata 14763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 28839 - 28909
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtata 199  Q
    ||||||||| || || ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  28839 gaggggagtataaatattacttttcaaggga-ggggagtgtatattttaacataagagg-ggaagggagtata 28909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 421236 - 421167
Alignment:
Q  142 tttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  421236 tttacttttctaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaaacatcttt 421167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 421925 - 421984
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| ||||||||||| ||||||||||| |||| ||||| |||||||| |||||||    
T  421925 aggggagggaagtgtatatttaaacataagagg-ggaagggagtgtaattcaagcatcttt 421984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 2327 - 2243
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||| || ||||| |||||||||||| |||||||||| |||||||||||||||| |||  ||||| |||||||| |||||||    
T  2327 gaggagagtataaatttttcttttcaaggga-ggggagtgtaaattttaacataagagg-ggaggggagtgtaattcaagcatcttt 2243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 11231 - 11284
Alignment:
Q  130 gggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagag 184  Q
    |||| |||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  11231 gggaatgtaaattttacttttcaaagga-ggggagtgtatattttaacataagag 11284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 12294 - 12210
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||||||||||| |||||| ||||||| ||| ||| |||| |||||||||||||||||| ||| |||| | |||||||| |||||||    
T  12294 gaggggagtgtaaattttatttttcaaagga-gggtagtgcatattttaacataagagg-ggagaggaatgtaattcaagcatcttt 12210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 12855 - 12914
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||| ||||||||||||||||||| ||||||  |||| |||||||| |||||||    
T  12855 agggaaggggaatgtatattttaacataaga-gaggaagagagtgtaattcaaacatcttt 12914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 185159 - 185212
Alignment:
Q  131 ggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||| || |||||||||||||||| |||| ||||||||||||||||||||||||    
T  185159 ggagtataaattttacttttcaagg-aaggagagtgtatattttaacataagagg 185212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0971 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0971
Description:

Target: scaffold0971; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 3203 - 3152
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacat 179  Q
    ||||||||| |  |||||||||||||||||| |||||||||||||||||||||    
T  3203 gaggggagtatcaattttacttttcaaggga-ggggagtgtatattttaacat 3152  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 17132 - 17176
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||    
T  17132 attttattttttaaggga-ggggagtgtatattttaacataagagg 17176  T

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Target: scaffold0159 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 34484 - 34424
Alignment:
Q  127 gaggggagtgtagattttacttttcaagggaaggggagtgtatattttaacataagaggagg 188  Q
    ||||||||| || |||||| ||||||||||  | ||| ||||||||||||||||||||||||    
T  34484 gaggggagtataaattttatttttcaagggt-gaggaatgtatattttaacataagaggagg 34424  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 33393 - 33332
Alignment:
Q  58 acttgaattacattcatcttctctcttatattaaaatttgcactttactccctcaatatttt 119  Q
    |||||||||||| ||  |||| ||||||  ||||||| | ||||||||||||||||||||||    
T  33393 acttgaattacactccccttccctcttaagttaaaatatacactttactccctcaatatttt 33332  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 26443 - 26373
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| || ||| ||||| ||||| || |||||||    
T  26443 attttacttttcaaggg-aggggagtgtata-tttaacataaga-gatgaagggagtgtaatttaaccatcttt 26373  T

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Target: scaffold0051 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 11613 - 11657
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||    
T  11613 attttacttttcaagaga-ggggagtgtataatttaacataagagg 11657  T

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Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 100094 - 100050
Alignment:
Q  140 attttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    ||||||||||||||| || || ||||||||||||||||||||||||    
T  100094 attttacttttcaagaga-ggagagtgtatattttaacataagagg 100050  T

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Target: scaffold0289 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 3487 - 3455
Alignment:
Q  153 agggaaggggagtgtatattttaacataagagg 185  Q
    |||| ||||||||||||||||||||||||||||    
T  3487 aggggaggggagtgtatattttaacataagagg 3455  T

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Target: scaffold0201 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 15324 - 15383
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    ||||||||||||| |||||||||||| ||||||| ||  ||||| |||||||| |||||||    
T  15324 agggaaggggagtctatattttaacaaaagagga-gacgggagtgtaattcaagcatcttt 15383  T

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Target: scaffold0105 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 19642 - 19701
Alignment:
Q  153 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 213  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  19642 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 19701  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 26006 - 25955
Alignment:
Q  131 ggagtgtagattttacttttcaagggaaggggagtgtatattttaacataaga 183  Q
    ||||| || ||||||||||| |||| | |||||||||||||||||||||||||    
T  26006 ggagtataaattttactttttaaggca-ggggagtgtatattttaacataaga 25955  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 161347 - 161304
Alignment:
Q  141 ttttacttttcaagggaaggggagtgtatattttaacataagagg 185  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||    
T  161347 ttttacttctcaatgga-ggggagtgtatattttaacataagagg 161304  T

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