View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19462_low_13 (Length: 250)
Name: NF19462_low_13
Description: NF19462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19462_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 7868136 - 7867970
Alignment:
| Q |
1 |
ttctaccaaataaggtcttctcagcacacactttctaaaattcaaacggatctcattaaagttatgtggatcctaggtgatttagtgaaatttacagatg |
100 |
Q |
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| T |
7868136 |
ttctaccaaataaggtcttctcagcacacactttctaaaattcaaacggatctcattaaagttatgtggatcctaggtgatttaatgaaatttacagatg |
7868037 |
T |
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| Q |
101 |
ttgcaattcgacgaataattaagacatgaaacaaataaattatcaataagacaatacattttctgat |
167 |
Q |
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| T |
7868036 |
ttgcaattcgacgaataatcaagacatgaaacaaataaattatcaataagacaatacattttctgat |
7867970 |
T |
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