View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19463_high_10 (Length: 476)
Name: NF19463_high_10
Description: NF19463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19463_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 433; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 14 - 462
Target Start/End: Complemental strand, 38592748 - 38592300
Alignment:
| Q |
14 |
gtacaatatttcatgttatctttattaaaggaatcatcaaattaaatctatatatcaagactcaatttcatgttattttatttatatatatgtcgatcaa |
113 |
Q |
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| T |
38592748 |
gtacaatatttcatgttatctttattaaaggaatcatcaaattaaatctatatatcaagactcaatttcatgtcattttatttatatatatgtcgatcaa |
38592649 |
T |
|
| Q |
114 |
tcaaaccatagcatgatacttttatatcatgtaggaaaaatgattttattgccgtgtatcatatcaatatgtataatgacaacgttttatattcatgaaa |
213 |
Q |
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| T |
38592648 |
tcaaaccatagcatgatacttttatttcatgtaggaaaaatgattttattgccgtgtatcatatcaatatgtataattacaacgttttatattcatgaaa |
38592549 |
T |
|
| Q |
214 |
aagaaaatacaacattttatgactttacaagatcaatatttaaagataaacaaaattttcgtagcgcaaaataaattgtagcataaattgcaaacaatat |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38592548 |
aagaaaatacaacattttatgactttacaagatcaatatttaaagataaacaaaattttcgtagcgcaaaataaattgtagcataaattgcaaacaatat |
38592449 |
T |
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| Q |
314 |
ttcaattgtgaatcggtggcttccttctagctggagtgtaatccattgaaaatacttcatctcccacattatgttcttcttttgccttaaacatatgatc |
413 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38592448 |
ttcaattgtgaatcggtggcttccttctagctggagtgtaatccattgaaaatacttcatctcccacattatgttcttcttttgccttaaacatatgatc |
38592349 |
T |
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| Q |
414 |
ttcctcattattatgagtattactcgttacatcattgcttttttccttc |
462 |
Q |
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| T |
38592348 |
ttccttattattatgagtattactcgttacatcattgcttttttccttc |
38592300 |
T |
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