View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19463_high_33 (Length: 241)
Name: NF19463_high_33
Description: NF19463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19463_high_33 |
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Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18273680 - 18273454
Alignment:
| Q |
1 |
aaatgaaacatttcttttattcttcacgaaggcttagtgaatcatataattacactacattttaattacaatatacaatcaccaacataagaaggaacta |
100 |
Q |
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| T |
18273680 |
aaatgaaacatttcttttattcttcatgaaagcttagcgaatcatataattacactacatttta--tacaatatacaat-accaacataagaaggaacta |
18273584 |
T |
|
| Q |
101 |
tgatatcagtggcatcaatgaattaataa---acgtttttgaggcaaggctcaacgatatgatacctgagtgcatccgaagagtttaagcaatctaagtg |
197 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18273583 |
tgatatcagtggcatcaatgaattaataactaacgtttttgaggcaaggctcaacgatatgatacctgagtgcatccgaagagtttaagcaatctaagtg |
18273484 |
T |
|
| Q |
198 |
acaagcaactatccactatcaaacccaatg |
227 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
18273483 |
acaagcaactatccactatcaaacccaatg |
18273454 |
T |
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