View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19463_high_34 (Length: 237)
Name: NF19463_high_34
Description: NF19463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19463_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 40384920 - 40385127
Alignment:
| Q |
14 |
caaagggaaggttgagaagtttgatgaattgaagggatacttgtgcacgtgtgatgtctttctttctaaaatgtctcactctgatcccatgtgtgttgtt |
113 |
Q |
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| T |
40384920 |
caaaaggaaggttgagaagtttgatgaattgaagggatacttgtgcacgtgtgatgtctttctttctaaaatgtctcactctgatcccatgtgtgttgtt |
40385019 |
T |
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| Q |
114 |
tatttacttcattaaaaatcgtaaaatatgggatagagatgccaatttgatacacaaatatatctatgtattatagcatagttagttttatgttttttca |
213 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40385020 |
tatttagttcattaaaaatcgtaaaatatgggatagagatgccaatttgatacacaaatatatctatgtattatagcatagttagttttatgttttttca |
40385119 |
T |
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| Q |
214 |
tatgtaat |
221 |
Q |
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|||||||| |
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| T |
40385120 |
tatgtaat |
40385127 |
T |
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