View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19463_low_35 (Length: 238)
Name: NF19463_low_35
Description: NF19463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19463_low_35 |
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Alignment Details
Target: chr1 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 42237962 - 42237808
Alignment:
| Q |
5 |
aacaaaaataattccacaacacaatcacaaaattcatcacatccttagttacaaggttcatgttagtgctacaatttacattacatgaaataataaataa |
104 |
Q |
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| T |
42237962 |
aacaaaaaaaattccacaacacaatcacaaaattcatcacatccttagttacaaggttcatgttagtgctacaatttacattgcatgaaataataaataa |
42237863 |
T |
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| Q |
105 |
aataaaggatatgtaacaaataccaacgatcttgaattaagaaacagtaagcatg |
159 |
Q |
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| T |
42237862 |
aataaaggatatgtaacaaataccaacgatcctgaattaagaaatagtaagcatg |
42237808 |
T |
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